Sed0011971 (gene) Chayote v1

Overview


Name	Sed0011971
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Late embryogenesis abundant protein (LEA) family protein
Location	LG09: 28352162 .. 28354973 (+)
RNA-Seq Expression	Sed0011971
Synteny	Sed0011971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGCTTCTTTGCCTCATCAGCAACTATCCCGAAGCTTCATGAAGCTGGATCTCTTCTTCTCAAAACCCCATGGATTTCTAAGGCTTTTGTCTCTCACACACCAAGACATGTTAGTTTGCATACCTAAATCAATACAACTCTACATTTCTGGATTTTACTTGGGTTTTTTAATAAAAAGACAGAAAATTCATGATTTTCTTTAAAAAAAAACTTAGTTATTTTTTCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAACTTGATATTTTTTTTTTTTAAATTTGATTAATAGTTATACCGTTGTGGCTTTTTTTTAAAAAAAATCCAATTTCTAACTATTATAGTATAATTAGAAGACGACATGCTTTTTTTTTTAATTTTATCTTAAAAAAAATTGTCAAATAGGGTTTAGCTATTTCGGATTAAAGTTTATTAGAGTTGGATTAGTTTTGGACATTTTTTGATTTGATAGCTATATATATTAGTTCTACACGGTTTTTATATTTTTCTTGTTTGTATAGATTTTTTTTTAAAAAAAATTGTCTATATAATTTTTAATTTCTAAACATTCTTACACTATTTTTGCTTTTTCTTCGTTTTTGTCGGCTTTTCTTCTCTTTTTTATTTTTTATTTTTTTGAGATTTTCTCTTTTTTATATTTAGATATAAAATTTTCATTTTTTACTTTTATTTATATTTTATATTTTTCTATTTTTTGTTTGTTTGTTTTGTTTATGTATTTTTCTATAAATATATTATGTATTTTCCTATGTTTTTGTTTACATATATCTTTATTCTTTCATACTTTAAAACACATTTTTTCTTTATTTCCTTACTATTTTATGGGTTTATACTTTTTTTATTGATTAAAATTGTATAGAAACTATTTTGGCAAATATGTTAGATTTATATTTCTTTTATATAAATATAAATGATAAATCATATTTTTTATTTACAGAATTATATCTTTAAAATATTTACCATTTACTTTTTTTTTTATTTGAAGTTGTTACATAGTTTTTATAAAGATTGTCAAATCAATTTAAATATTTAATTAAAAAAAATATTAGGGTGTTAAATCATTAATTTAATCAACAAATAATATTAAAAAAAATTATGGATTTATTAGATAAAAAATTTGAGAAACTTATTAGATATTAGATTAAAAATTTAAACATTTACTTATATATGTAGAATATTAAGTGAACATTTGAAATCTAAAGATAAATTTTTTTAATATAATATATTTTTTGGCACCCAAACATCAACTTGGGATTAGCCTTTTTATAGGATTGCTAATTTGTAATAATTTTTAGAGTCACAATGAAAAACTACCAAACTAGCTAGGTTTGCCAATACTCTTCATTATCTAATTTCTTCTGTGACTTATGAACACAACTCATTTAATTTGTTGGTCTTGTAGAAGATAACAAATATTATTGAAATTCAGGCAAGTTCACAGGCCGGGGTTGCAGCAGCTGATGGAGCTGCTCATGCGGTGAAGCGAGAAGCGGAGAAGAGTGCCGAAAAGGTCAAAGACAAGGTTGTTTCTTCCGCCGAAGAGGTTCCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTTCTTCTCTCTTCTTCTTCTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCTTCTTTTTTCACAAGTTTCAATGTTATTTTTAATATGTGAATCTCAGGTAAGTGAAAAAACAAAGGAAGCAGCGGGAAAAGTGTCTGAAACAGCACAGGATATGGCTGGGAAGGCAAAGCAGACAGTGGAAGGGGCATGGGAAACAGTGAAGGATACAACTCAAAGCCTCAAGGAGAAGGTGGTTGGCAAAGTGGAGGAATCTAAAGAAGCCATCAAAGACACTGCTGACAATCTCAAAAACAATGTTAAGTCCAACTGTTGA

mRNA sequence

ATGGCAAGCTTCTTTGCCTCATCAGCAACTATCCCGAAGCTTCATGAAGCTGGATCTCTTCTTCTCAAAACCCCATGGATTTCTAAGGCTTTTGTCTCTCACACACCAAGACATGCAAGTTCACAGGCCGGGGTTGCAGCAGCTGATGGAGCTGCTCATGCGGTGAAGCGAGAAGCGGAGAAGAGTGCCGAAAAGGTCAAAGACAAGGTTGTTTCTTCCGCCGAAGAGGTAAGTGAAAAAACAAAGGAAGCAGCGGGAAAAGTGTCTGAAACAGCACAGGATATGGCTGGGAAGGCAAAGCAGACAGTGGAAGGGGCATGGGAAACAGTGAAGGATACAACTCAAAGCCTCAAGGAGAAGGTGGTTGGCAAAGTGGAGGAATCTAAAGAAGCCATCAAAGACACTGCTGACAATCTCAAAAACAATGTTAAGTCCAACTGTTGA

Coding sequence (CDS)

ATGGCAAGCTTCTTTGCCTCATCAGCAACTATCCCGAAGCTTCATGAAGCTGGATCTCTTCTTCTCAAAACCCCATGGATTTCTAAGGCTTTTGTCTCTCACACACCAAGACATGCAAGTTCACAGGCCGGGGTTGCAGCAGCTGATGGAGCTGCTCATGCGGTGAAGCGAGAAGCGGAGAAGAGTGCCGAAAAGGTCAAAGACAAGGTTGTTTCTTCCGCCGAAGAGGTAAGTGAAAAAACAAAGGAAGCAGCGGGAAAAGTGTCTGAAACAGCACAGGATATGGCTGGGAAGGCAAAGCAGACAGTGGAAGGGGCATGGGAAACAGTGAAGGATACAACTCAAAGCCTCAAGGAGAAGGTGGTTGGCAAAGTGGAGGAATCTAAAGAAGCCATCAAAGACACTGCTGACAATCTCAAAAACAATGTTAAGTCCAACTGTTGA

Protein sequence

MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC

Homology

[Close]

BLAST of Sed0011971 vs. NCBI nr
Match: XP_008457975.1 (PREDICTED: uncharacterized protein At4g13230 [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 3.7e-46
Identity = 109/147 (74.15%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAE 60
           MASF A+SAT+PKL  AGS+++  PW SK FVS  PRH SSQ   AAADGAA AVKR  E
Sbjct: 1   MASFLATSATLPKLQRAGSIIVHNPWSSKVFVSLRPRHGSSQVS-AAADGAAQAVKRTTE 60

Query: 61  KSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEK 120
           K+AE+VKDK VS+AEEV++KTK+ AGKVSETAQDMAGKAKQTVE AW +VKDTTQ++KEK
Sbjct: 61  KAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEK 120

Query: 121 VVGKVEESKEAIKDTADNLKNNVKSNC 148
           VVGK EESKEAIKDTA+N+KNN+KSNC
Sbjct: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 146

[Close]

BLAST of Sed0011971 vs. NCBI nr
Match: XP_038897424.1 (uncharacterized protein At4g13230 [Benincasa hispida])

HSP 1 Score: 191.8 bits (486), Expect = 4.1e-45
Identity = 105/147 (71.43%), Postives = 123/147 (83.67%), Query Frame = 0


Query: 1   MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAE 60
           MASF A SAT+PKLH A S+ ++TPW SK FVS  P+H SS+   AAADGAA  VKR  E
Sbjct: 1   MASFLAPSATLPKLHRARSIHVRTPWSSKVFVSVRPKHESSKVAAAAADGAAQVVKRATE 60

Query: 61  KSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEK 120
           K+AE VKDK VS+A+EV++KTKE AGKVSETAQD+AGKAKQTV+ AW +VKDTTQ++KEK
Sbjct: 61  KAAEDVKDKAVSAADEVTQKTKEVAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEK 120

Query: 121 VVGKVEESKEAIKDTADNLKNNVKSNC 148
           VVGK EESKEAIKDTADNLK N+K+NC
Sbjct: 121 VVGKAEESKEAIKDTADNLKKNIKTNC 147

[Close]

BLAST of Sed0011971 vs. NCBI nr
Match: XP_011659168.1 (uncharacterized protein At4g13230 [Cucumis sativus] >KGN44571.1 hypothetical protein Csa_016428 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 7.1e-45
Identity = 104/147 (70.75%), Postives = 123/147 (83.67%), Query Frame = 0


Query: 1   MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAE 60
           MASF A+SATIPKL  AGS+++  PW S  FVS  PRH SSQ   AAAD AAH VKR  E
Sbjct: 1   MASFLATSATIPKLQRAGSIIVHNPWSSNVFVSLRPRHGSSQVTAAAADEAAHVVKRTTE 60

Query: 61  KSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEK 120
           ++AE+VKDK VS+A+EV+++TKE AGKVSETAQDMAGKAKQTVE AW +VKDTTQ++K+K
Sbjct: 61  RAAEEVKDKAVSAADEVTQRTKEVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKQK 120

Query: 121 VVGKVEESKEAIKDTADNLKNNVKSNC 148
           VVGK EESKEAIKDTA+N+K N+KSNC
Sbjct: 121 VVGKAEESKEAIKDTAENIKKNIKSNC 147

[Close]

BLAST of Sed0011971 vs. NCBI nr
Match: XP_022152517.1 (uncharacterized protein At4g13230 [Momordica charantia])

HSP 1 Score: 184.1 bits (466), Expect = 8.6e-43
Identity = 105/149 (70.47%), Postives = 125/149 (83.89%), Query Frame = 0


Query: 1   MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQ--AGVAAADGAAHAVKRE 60
           MAS  AS+ATI KL+ AGS+L+++PW S+ FVS  PRHASS   A  AAADGAA  VKR 
Sbjct: 1   MASSLASAATISKLNRAGSVLVRSPWSSRVFVSVRPRHASSSQFAAAAAADGAAQGVKRA 60

Query: 61  AEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLK 120
            EK+AE+VKDK  S+AEEV++KTKE AGKVSETAQD+AGKAKQTV+ AW +VKDTTQ++K
Sbjct: 61  TEKAAEEVKDKASSAAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQNIK 120

Query: 121 EKVVGKVEESKEAIKDTADNLKNNVKSNC 148
           EKVVGK EESKEAIKDTADN+K+ +KSNC
Sbjct: 121 EKVVGKAEESKEAIKDTADNIKDKIKSNC 149

[Close]

BLAST of Sed0011971 vs. NCBI nr
Match: GAV70662.1 (hypothetical protein CFOL_v3_14160, partial [Cephalotus follicularis])

HSP 1 Score: 111.3 bits (277), Expect = 7.1e-21
Identity = 71/134 (52.99%), Postives = 96/134 (71.64%), Query Frame = 0


Query: 19  SLLLKTPWISKAFVSHTPR--HASS--QAGVAAADGAAHAVKR---EAEKSAEKVKDKVV 78
           ++L++ PW S+ FV  T R  HAS   Q   +A D A  A K+   EA+K+ E VKDK  
Sbjct: 3   AVLIRNPWSSRVFVPVTKRQIHASGSRQEASSACDKATQAAKQGANEAKKTCEDVKDKAA 62

Query: 79  SSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEA 138
           S+AE+V++K ++AA KV ETAQD+  KAKQTV+ AW +VKDTT  +K+ VVGK EESKE+
Sbjct: 63  SNAEQVTKKAEDAADKVKETAQDLTQKAKQTVQDAWGSVKDTTTKIKDTVVGKAEESKES 122

Query: 139 IKDTADNLKNNVKS 146
           IK+TA+N+K NVK+
Sbjct: 123 IKETAENVKRNVKN 136

[Close]

BLAST of Sed0011971 vs. ExPASy Swiss-Prot
Match: Q8LFD5 (Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.4e-08
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 64  EKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVG 123
           + V DK   + ++V++K  E A  +S+ A ++  KAK T E AW+ VKDTT+ +K+ V G
Sbjct: 35  DSVCDKATEAQQKVAKKADEGAQTISDAAGNLKDKAKNTAEEAWDKVKDTTEKIKDTVTG 94

Query: 124 KVEESKEAIKDTADNLKNNVKS 146
           K EE+KE+IK TA  ++ ++ +
Sbjct: 95  KTEETKESIKATAKTVERSMNT 116

[Close]

BLAST of Sed0011971 vs. ExPASy TrEMBL
Match: A0A1S3C7D4 (uncharacterized protein At4g13230 OS=Cucumis melo OX=3656 GN=LOC103497533 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.8e-46
Identity = 109/147 (74.15%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAE 60
           MASF A+SAT+PKL  AGS+++  PW SK FVS  PRH SSQ   AAADGAA AVKR  E
Sbjct: 1   MASFLATSATLPKLQRAGSIIVHNPWSSKVFVSLRPRHGSSQVS-AAADGAAQAVKRTTE 60

Query: 61  KSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEK 120
           K+AE+VKDK VS+AEEV++KTK+ AGKVSETAQDMAGKAKQTVE AW +VKDTTQ++KEK
Sbjct: 61  KAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEK 120

Query: 121 VVGKVEESKEAIKDTADNLKNNVKSNC 148
           VVGK EESKEAIKDTA+N+KNN+KSNC
Sbjct: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 146

[Close]

BLAST of Sed0011971 vs. ExPASy TrEMBL
Match: A0A0A0K9U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336500 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.4e-45
Identity = 104/147 (70.75%), Postives = 123/147 (83.67%), Query Frame = 0


Query: 1   MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAE 60
           MASF A+SATIPKL  AGS+++  PW S  FVS  PRH SSQ   AAAD AAH VKR  E
Sbjct: 1   MASFLATSATIPKLQRAGSIIVHNPWSSNVFVSLRPRHGSSQVTAAAADEAAHVVKRTTE 60

Query: 61  KSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEK 120
           ++AE+VKDK VS+A+EV+++TKE AGKVSETAQDMAGKAKQTVE AW +VKDTTQ++K+K
Sbjct: 61  RAAEEVKDKAVSAADEVTQRTKEVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKQK 120

Query: 121 VVGKVEESKEAIKDTADNLKNNVKSNC 148
           VVGK EESKEAIKDTA+N+K N+KSNC
Sbjct: 121 VVGKAEESKEAIKDTAENIKKNIKSNC 147

[Close]

BLAST of Sed0011971 vs. ExPASy TrEMBL
Match: A0A6J1DGG7 (uncharacterized protein At4g13230 OS=Momordica charantia OX=3673 GN=LOC111020221 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.2e-43
Identity = 105/149 (70.47%), Postives = 125/149 (83.89%), Query Frame = 0


Query: 1   MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQ--AGVAAADGAAHAVKRE 60
           MAS  AS+ATI KL+ AGS+L+++PW S+ FVS  PRHASS   A  AAADGAA  VKR 
Sbjct: 1   MASSLASAATISKLNRAGSVLVRSPWSSRVFVSVRPRHASSSQFAAAAAADGAAQGVKRA 60

Query: 61  AEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLK 120
            EK+AE+VKDK  S+AEEV++KTKE AGKVSETAQD+AGKAKQTV+ AW +VKDTTQ++K
Sbjct: 61  TEKAAEEVKDKASSAAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQNIK 120

Query: 121 EKVVGKVEESKEAIKDTADNLKNNVKSNC 148
           EKVVGK EESKEAIKDTADN+K+ +KSNC
Sbjct: 121 EKVVGKAEESKEAIKDTADNIKDKIKSNC 149

[Close]

BLAST of Sed0011971 vs. ExPASy TrEMBL
Match: A0A1Q3BS03 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14160 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.4e-21
Identity = 71/134 (52.99%), Postives = 96/134 (71.64%), Query Frame = 0


Query: 19  SLLLKTPWISKAFVSHTPR--HASS--QAGVAAADGAAHAVKR---EAEKSAEKVKDKVV 78
           ++L++ PW S+ FV  T R  HAS   Q   +A D A  A K+   EA+K+ E VKDK  
Sbjct: 3   AVLIRNPWSSRVFVPVTKRQIHASGSRQEASSACDKATQAAKQGANEAKKTCEDVKDKAA 62

Query: 79  SSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEA 138
           S+AE+V++K ++AA KV ETAQD+  KAKQTV+ AW +VKDTT  +K+ VVGK EESKE+
Sbjct: 63  SNAEQVTKKAEDAADKVKETAQDLTQKAKQTVQDAWGSVKDTTTKIKDTVVGKAEESKES 122

Query: 139 IKDTADNLKNNVKS 146
           IK+TA+N+K NVK+
Sbjct: 123 IKETAENVKRNVKN 136

[Close]

BLAST of Sed0011971 vs. ExPASy TrEMBL
Match: B9S570 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1721910 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 7.7e-21
Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = 0


Query: 1   MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRH---ASSQAGVAAADGAAHAVKR 60
           MAS  + +  IPK  + G+L++K+PW S+ F+  T RH    +      A D A+ A K+
Sbjct: 1   MASLPSLATIIPKCGQVGALVMKSPWSSRVFLPITRRHFQATTRNEESNAYDKASQATKQ 60

Query: 61  ---EAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTT 120
              EA+   E VK+K  S+AE+VS+K KE AG+ S+TAQD+  KAKQTVEGAW +VKDTT
Sbjct: 61  GVNEAKNVGEDVKNKAASAAEDVSKKAKEVAGEASKTAQDVTEKAKQTVEGAWGSVKDTT 120

Query: 121 QSLKEKVVGKVEESKEAIKDTADNLKNNVKS 146
           Q +K+  VG  EESKE +K+ AD++K ++ S
Sbjct: 121 QKIKDTAVGLAEESKEFVKENADSVKRSMNS 151

[Close]

BLAST of Sed0011971 vs. TAIR 10
Match: AT4G13230.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 6.7e-09
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 64  EKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVG 123
           + V DK   + ++V++K  E A  +S+ A ++  KAK T E AW+ VKDTT+ +K+ V G
Sbjct: 35  DSVCDKATEAQQKVAKKADEGAQTISDAAGNLKDKAKNTAEEAWDKVKDTTEKIKDTVTG 94

Query: 124 KVEESKEAIKDTADNLKNNVKS 146
           K EE+KE+IK TA  ++ ++ +
Sbjct: 95  KTEETKESIKATAKTVERSMNT 116

[Close]

BLAST of Sed0011971 vs. TAIR 10
Match: AT5G44310.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-05
Identity = 36/93 (38.71%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 49  DGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWE 108
           D       R A+K AE+ KDK    AE+  EK ++ A    E AQD+  K   TV+  WE
Sbjct: 186 DKVNEGASRAADK-AEETKDKAKDYAEDSKEKAEDMAHGFKEKAQDIGEKTMDTVKDVWE 245

Query: 109 TVKDTTQSLKEKVVGKVEESKEAIKDTADNLKN 142
           T K T Q + E VVG  EE+ +A  D    L++
Sbjct: 246 TAKSTAQKVTEAVVGSGEEADKARDDVDKGLED 277

[Close]

BLAST of Sed0011971 vs. TAIR 10
Match: AT5G44310.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-05
Identity = 36/93 (38.71%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 49  DGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWE 108
           D       R A+K AE+ KDK    AE+  EK ++ A    E AQD+  K   TV+  WE
Sbjct: 222 DKVNEGASRAADK-AEETKDKAKDYAEDSKEKAEDMAHGFKEKAQDIGEKTMDTVKDVWE 281

Query: 109 TVKDTTQSLKEKVVGKVEESKEAIKDTADNLKN 142
           T K T Q + E VVG  EE+ +A  D    L++
Sbjct: 282 TAKSTAQKVTEAVVGSGEEADKARDDVDKGLED 313

The following BLAST results are available for this feature:

BLAST of Sed0011971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457975.1	3.7e-46	74.15	PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]	[more]
XP_038897424.1	4.1e-45	71.43	uncharacterized protein At4g13230 [Benincasa hispida]	[more]
XP_011659168.1	7.1e-45	70.75	uncharacterized protein At4g13230 [Cucumis sativus] >KGN44571.1 hypothetical pro...	[more]
XP_022152517.1	8.6e-43	70.47	uncharacterized protein At4g13230 [Momordica charantia]	[more]
GAV70662.1	7.1e-21	52.99	hypothetical protein CFOL_v3_14160, partial [Cephalotus follicularis]	[more]

BLAST of Sed0011971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFD5	9.4e-08	40.24	Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 P...	[more]

BLAST of Sed0011971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7D4	1.8e-46	74.15	uncharacterized protein At4g13230 OS=Cucumis melo OX=3656 GN=LOC103497533 PE=4 S...	[more]
A0A0A0K9U4	3.4e-45	70.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336500 PE=4 SV=1	[more]
A0A6J1DGG7	4.2e-43	70.47	uncharacterized protein At4g13230 OS=Momordica charantia OX=3673 GN=LOC111020221...	[more]
A0A1Q3BS03	3.4e-21	52.99	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]
B9S570	7.7e-21	47.02	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1721910 PE=4 SV=1	[more]

BLAST of Sed0011971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13230.1	6.7e-09	40.24	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G44310.1	4.5e-05	38.71	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G44310.2	4.5e-05	38.71	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..76
None	No IPR available	COILS	Coil	Coil	coord: 122..142
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 38..147 e-value: 6.9E-11 score: 44.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..87
None	No IPR available	PANTHER	PTHR47372	DAUER UP-REGULATED-RELATED	coord: 1..145
None	No IPR available	PANTHER	PTHR47372:SF12	SUBFAMILY NOT NAMED	coord: 1..145
None	No IPR available	SUPERFAMILY	58113	Apolipoprotein A-I	coord: 55..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011971.1	Sed0011971.1	mRNA