Sed0011955 (gene) Chayote v1

Overview


Name	Sed0011955
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein FAM110A like
Location	LG08: 2531879 .. 2532878 (-)
RNA-Seq Expression	Sed0011955
Synteny	Sed0011955

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGCTTGTTCAGCCAAATTAAAGAGTACGAAAATGGGAGAAAAATAGGCAGTTTTAGTTTTCTTAGATATTATTATTATTATTATTTAAATATGGCAGTTTCTTTTCTTAGTAAAATCCAACCCCCCCTTTCTTCTTCGTTCTCGTTTCTTCATCTACCAGACAACAATGGCCGCACGAACAACCGAAAACCTCCATATACACTACGCGTTTTCTCCTTTTTCTCTCTCTCAATCCCTCCATTTCCCCGTCTTCTTCGCTCCTCCCATGCCGATCTCACAACTTCCTCTTCTCGACTAAGCCCTACCTTCTTCTTTACCTCATCTCCCTCGCTCCACATCGCATTCGCACATGCTTTTTTCCCGGTGGATTCACTCATTCCTCACGAAATGCGAATCCAAAGCAATTGAAATGCGGAATTACATGACCTCGAATCGGAAGCGCATACAAAGAAATTGAAATCAGAATACGTACATTCGTCGTCTTCGTTCGATTCGGAATCGTACGTTTCCGATTCGAGTTTCTTCAATCGGCTGTGTTTTACATGAATCGGAAGGTTCTCCTCCGATCTCCGGCAATCATCCACCGCCAACCGTCGCCGAAGGACGAGGGGATCGACGCGCCGCGGCCGAAGGGCCGGTTCGCGGAGGTTGCCGGCGGTTCTGCCGCGGAGTGCACGGCGGTTTGTTGCTGCTGTCCATGGGCGGTGCTCAACATCGTGATCTTCGCCGTGTACCGGATACCGGCGGGGCTGTGCCGGAAGGCGCTGAACAGGCGAAAGCGACGCGGTAAAAAGAAATATCTCATCCAGCAGCGCAAGGCCGCTTCTCGGGATTTTGCCGATGGGCGGGTGGGGCCCGCGATGGAGAGTTTCGAGGCCCACAAACCGGTGGGTGACGTGGCGGGCGGGGATGACTTGGAGAGGCTAGAAGAGGAAATGTGGGACCGGTTCAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGGCACGAGGAGTAA

mRNA sequence

CATGCTTGTTCAGCCAAATTAAAGAGTACGAAAATGGGAGAAAAATAGGCAGTTTTAGTTTTCTTAGATATTATTATTATTATTATTTAAATATGGCAGTTTCTTTTCTTAGTAAAATCCAACCCCCCCTTTCTTCTTCGTTCTCGTTTCTTCATCTACCAGACAACAATGGCCGCACGAACAACCGAAAACCTCCATATACACTACGCGTTTTCTCCTTTTTCTCTCTCTCAATCCCTCCATTTCCCCGTCTTCTTCGCTCCTCCCATGCCGATCTCACAACTTCCTCTTCTCGACTAAGCCCTACCTTCTTCTTTACCTCATCTCCCTCGCTCCACATCGCATTCGCACATGCTTTTTTCCCGGTGGATTCACTCATTCCTCACGAAATGCGAATCCAAAGCAATTGAAATGCGGAATTACATGACCTCGAATCGGAAGCGCATACAAAGAAATTGAAATCAGAATACGTACATTCGTCGTCTTCGTTCGATTCGGAATCGTACGTTTCCGATTCGAGTTTCTTCAATCGGCTGTGTTTTACATGAATCGGAAGGTTCTCCTCCGATCTCCGGCAATCATCCACCGCCAACCGTCGCCGAAGGACGAGGGGATCGACGCGCCGCGGCCGAAGGGCCGGTTCGCGGAGGTTGCCGGCGGTTCTGCCGCGGAGTGCACGGCGGTTTGTTGCTGCTGTCCATGGGCGGTGCTCAACATCGTGATCTTCGCCGTGTACCGGATACCGGCGGGGCTGTGCCGGAAGGCGCTGAACAGGCGAAAGCGACGCGGTAAAAAGAAATATCTCATCCAGCAGCGCAAGGCCGCTTCTCGGGATTTTGCCGATGGGCGGGTGGGGCCCGCGATGGAGAGTTTCGAGGCCCACAAACCGGTGGGTGACGTGGCGGGCGGGGATGACTTGGAGAGGCTAGAAGAGGAAATGTGGGACCGGTTCAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGGCACGAGGAGTAA

Coding sequence (CDS)

ATGAATCGGAAGGTTCTCCTCCGATCTCCGGCAATCATCCACCGCCAACCGTCGCCGAAGGACGAGGGGATCGACGCGCCGCGGCCGAAGGGCCGGTTCGCGGAGGTTGCCGGCGGTTCTGCCGCGGAGTGCACGGCGGTTTGTTGCTGCTGTCCATGGGCGGTGCTCAACATCGTGATCTTCGCCGTGTACCGGATACCGGCGGGGCTGTGCCGGAAGGCGCTGAACAGGCGAAAGCGACGCGGTAAAAAGAAATATCTCATCCAGCAGCGCAAGGCCGCTTCTCGGGATTTTGCCGATGGGCGGGTGGGGCCCGCGATGGAGAGTTTCGAGGCCCACAAACCGGTGGGTGACGTGGCGGGCGGGGATGACTTGGAGAGGCTAGAAGAGGAAATGTGGGACCGGTTCAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGGCACGAGGAGTAA

Protein sequence

MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRKRRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHEE

Homology

[Close]

BLAST of Sed0011955 vs. NCBI nr
Match: KGN63891.1 (hypothetical protein Csa_014343 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 1.8e-51
Identity = 109/152 (71.71%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRS AI HR P  +D  IDAPR + +FAEVAGGSAAECTAVCCCCPW VLNI+I
Sbjct: 1   MTRKVLLRSAAIRHRSPL-RDGKIDAPRERRQFAEVAGGSAAECTAVCCCCPWTVLNILI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGD 120
           FA+YR+PAGLCRKA+NRRK  RR K+KYLIQQRKAAS DF DG VGP ++ +  H+   D
Sbjct: 61  FAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHE-AND 120

Query: 121 VAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE 151
           VA G+DL++LE+EMW RFSQTGFWRSSSQRH+
Sbjct: 121 VAAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 150

[Close]

BLAST of Sed0011955 vs. NCBI nr
Match: XP_038879203.1 (uncharacterized protein LOC120071168 [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-50
Identity = 111/153 (72.55%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRSPA+ H      DE IDAP+ + +FAEVAGGSAAECTA+CCCCPW V+NIVI
Sbjct: 1   MTRKVLLRSPAMRHE----SDEKIDAPQERRQFAEVAGGSAAECTAICCCCPWTVMNIVI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVG-PAMESFEAHKPVG 120
           FAVYR+PAGLCRKA+NRRK  R+ KKK LIQQRKA S DF DG VG P MES EAHK   
Sbjct: 61  FAVYRMPAGLCRKAMNRRKRHRKMKKKCLIQQRKAVSMDFTDGSVGPPPMESVEAHKRPN 120

Query: 121 DVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE 151
           DVA  +DL++LEEEMW RF+QTGFWRSSSQRHE
Sbjct: 121 DVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 149

[Close]

BLAST of Sed0011955 vs. NCBI nr
Match: XP_022933995.1 (uncharacterized protein LOC111441234 [Cucurbita moschata])

HSP 1 Score: 201.4 bits (511), Expect = 5.4e-48
Identity = 103/152 (67.76%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRS AI  +  S K E  DA R K +FAE+AGGSAA+CT +CCCCPW V+N+VI
Sbjct: 1   MARKVLLRSQAIERQSSSQKSEKSDASRDKRQFAELAGGSAADCTIICCCCPWTVMNLVI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGD 120
           FAVYR+P GLCRKA+NRRK  RR K+K LIQQRKAAS++F D  V PA+ESFEA K   D
Sbjct: 61  FAVYRMPLGLCRKAMNRRKRHRRLKRKCLIQQRKAASQEFEDASVEPALESFEATKQAND 120

Query: 121 VAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE 151
            A G+D+ +LEEEMW RF+QTGFWRSSSQRHE
Sbjct: 121 AAHGEDMNKLEEEMWGRFNQTGFWRSSSQRHE 152

[Close]

BLAST of Sed0011955 vs. NCBI nr
Match: XP_023531763.1 (uncharacterized protein LOC111793918 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 103/152 (67.76%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRS AI  +  S K E  DA R K  FAE+AGGSAA+CT +CCCCPW V+N+VI
Sbjct: 1   MARKVLLRSQAIDRQSSSQKSEKSDASRDKRLFAELAGGSAADCTIICCCCPWTVMNLVI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGD 120
           FAVYR+P GLCRKA+NRRK  RR K+K LIQQRKAAS++F D  V PA+ESFEA K   D
Sbjct: 61  FAVYRMPLGLCRKAMNRRKRQRRLKRKCLIQQRKAASQEFEDASVEPALESFEATKQAND 120

Query: 121 VAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE 151
            A G+D+ +LEEEMW RF+QTGFWRSSSQRHE
Sbjct: 121 AAHGEDMNKLEEEMWGRFNQTGFWRSSSQRHE 152

[Close]

BLAST of Sed0011955 vs. NCBI nr
Match: KAG6587694.1 (hypothetical protein SDJN03_16259, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021660.1 hypothetical protein SDJN02_15386, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 102/152 (67.11%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRS AI  +  S K E  DA R K +FAE+AGGSAA+CT +CCCCPW V+N+VI
Sbjct: 1   MARKVLLRSQAIERQSSSQKSEKSDASRDKRQFAELAGGSAADCTIICCCCPWTVMNLVI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGD 120
           FAVYR+P GLCRKA+NRRK  RR K+K LIQQRKA S++F D  V PA+ESFEA K   D
Sbjct: 61  FAVYRMPLGLCRKAMNRRKRHRRLKRKCLIQQRKAVSQEFEDASVEPALESFEATKQAND 120

Query: 121 VAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE 151
            A G+D+ +LEEEMW RF+QTGFWRSSSQRHE
Sbjct: 121 AAHGEDMNKLEEEMWGRFNQTGFWRSSSQRHE 152

[Close]

BLAST of Sed0011955 vs. ExPASy TrEMBL
Match: A0A0A0LV48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025240 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 8.6e-52
Identity = 109/152 (71.71%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRS AI HR P  +D  IDAPR + +FAEVAGGSAAECTAVCCCCPW VLNI+I
Sbjct: 1   MTRKVLLRSAAIRHRSPL-RDGKIDAPRERRQFAEVAGGSAAECTAVCCCCPWTVLNILI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGD 120
           FA+YR+PAGLCRKA+NRRK  RR K+KYLIQQRKAAS DF DG VGP ++ +  H+   D
Sbjct: 61  FAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHE-AND 120

Query: 121 VAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE 151
           VA G+DL++LE+EMW RFSQTGFWRSSSQRH+
Sbjct: 121 VAAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 150

[Close]

BLAST of Sed0011955 vs. ExPASy TrEMBL
Match: A0A6J1F6E1 (uncharacterized protein LOC111441234 OS=Cucurbita moschata OX=3662 GN=LOC111441234 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.6e-48
Identity = 103/152 (67.76%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRS AI  +  S K E  DA R K +FAE+AGGSAA+CT +CCCCPW V+N+VI
Sbjct: 1   MARKVLLRSQAIERQSSSQKSEKSDASRDKRQFAELAGGSAADCTIICCCCPWTVMNLVI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGD 120
           FAVYR+P GLCRKA+NRRK  RR K+K LIQQRKAAS++F D  V PA+ESFEA K   D
Sbjct: 61  FAVYRMPLGLCRKAMNRRKRHRRLKRKCLIQQRKAASQEFEDASVEPALESFEATKQAND 120

Query: 121 VAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE 151
            A G+D+ +LEEEMW RF+QTGFWRSSSQRHE
Sbjct: 121 AAHGEDMNKLEEEMWGRFNQTGFWRSSSQRHE 152

[Close]

BLAST of Sed0011955 vs. ExPASy TrEMBL
Match: A0A5D3DY75 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001510 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.8e-47
Identity = 102/147 (69.39%), Postives = 119/147 (80.95%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRS A+ HR  S +D  IDAP+ + +FAEVAGGSAAECTAVCCCCPW VLNI I
Sbjct: 1   MTRKVLLRSQAVRHRS-SLQDGKIDAPQERRQFAEVAGGSAAECTAVCCCCPWTVLNIFI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGD 120
           FA+YR+PAGLCRKA+NRRK  RR K+KYLIQQRKA + DF DG VGP ++SF  H+   D
Sbjct: 61  FAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAVAMDFTDGSVGPIIDSFGTHE-TND 120

Query: 121 VAGGDDLERLEEEMWDRFSQTGFWRSS 146
           VA  +DL++LEEEMW RFSQTGFWR+S
Sbjct: 121 VADSEDLKKLEEEMWGRFSQTGFWRTS 145

[Close]

BLAST of Sed0011955 vs. ExPASy TrEMBL
Match: A0A5A7UQK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004700 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.9e-47
Identity = 101/147 (68.71%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M RKVLLRS A+ HR  S +D  IDAP+ + +FAEVAGGSAAECTAVCCCCPW VLNI+I
Sbjct: 1   MTRKVLLRSQAVRHRS-SLQDGKIDAPQERRQFAEVAGGSAAECTAVCCCCPWTVLNILI 60

Query: 61  FAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGD 120
           F++YR+PAGLCRKA+NRRK  RR K+KYLIQQRKA + DF DG VGP ++SF  H+   D
Sbjct: 61  FSIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAVAMDFTDGSVGPIIDSFGTHQ-TND 120

Query: 121 VAGGDDLERLEEEMWDRFSQTGFWRSS 146
           VA  +DL++LEEEMW RFSQTGFWR+S
Sbjct: 121 VADSEDLKKLEEEMWGRFSQTGFWRTS 145

[Close]

BLAST of Sed0011955 vs. ExPASy TrEMBL
Match: A0A6J1BZB0 (uncharacterized protein LOC111006972 OS=Momordica charantia OX=3673 GN=LOC111006972 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 8.9e-41
Identity = 98/155 (63.23%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVI 60
           M  KVLLRSPAI H + S KDE +DAPR + +FAEVAGGSAAECTA+CCCCP  V+NIVI
Sbjct: 1   MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVI 60

Query: 61  FAVYRIPAGLCRKALNRRKRRG--KKKYLIQQRKAASRDFADGRVGP-AMESFEAHKPVG 120
           FA+Y++PAGLCRKAL  RKR G  KKK LIQQR+ AS++F DG  GP  +  F+   P  
Sbjct: 61  FAIYKMPAGLCRKALKSRKRHGKMKKKRLIQQRRGASQEFTDGSEGPGGIGGFDQVPPQV 120

Query: 121 DVA-----GGDDLERLEEEMWDRFSQTGFWRSSSQ 148
             A       DDL  LEEEMW +FSQTGFWRSSSQ
Sbjct: 121 PGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQ 155

[Close]

BLAST of Sed0011955 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 5.0e-20
Identity = 64/160 (40.00%), Postives = 88/160 (55.00%), Query Frame = 0


Query: 1   MNRKVLLRSPAIIHRQPS------PKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWA 60
           M R V+L+SP ++  + S      P    +   R K    EVAGG+AAEC AV CCCP A
Sbjct: 1   MTRHVILKSPLLVSSEESTMRNSPPSTTSLSKERRK--VGEVAGGAAAECAAVWCCCPCA 60

Query: 61  VLNIVIFAVYRIPAGLCRKALNRRKRR--GKKKY--LIQQRKAASRDFADGRVGPAMESF 120
           V+N+++ AVY++PA +C+KA  R KRR   +K++  L       S      R+     + 
Sbjct: 61  VVNLMVLAVYKVPAAVCKKAWRRSKRRRFTRKRHGLLASATAEGSESTVHARLNEEDLTA 120

Query: 121 EAHKPVGDVAGGD--DLERLEEEMWDRFSQTGFWRSSSQR 149
           E       V+GG+  D+ RLE EM DRF   GFWRS SQ+
Sbjct: 121 EIVFEECHVSGGELNDVVRLENEMLDRFYGAGFWRSPSQK 158

[Close]

BLAST of Sed0011955 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 4.9e-15
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 34  AEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALN--RRKRRGKKKYLIQQR 93
           AE  GG+ A C A+C C P +V+N+V+ AVY++P GLCR+A+   RRKR  KK+++   R
Sbjct: 24  AECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGR 83

Query: 94  KAASRDFADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQ 148
           +      +   V P +ES +  +   +    + +  LE+EMW RF   GFWRS SQ
Sbjct: 84  EFGRGGSSQFAVHP-LESRDEEEE--EEEEDEAVIALEKEMWSRFYSGGFWRSLSQ 136

[Close]

BLAST of Sed0011955 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 56/176 (31.82%), Postives = 83/176 (47.16%), Query Frame = 0


Query: 9   SPAIIHRQPSPKDEGIDAPRPKGRF-----AEVAGGSAAECTAVCCCCPWAVLNIVIFAV 68
           SP+  +R+       + +P P+        AE  GG+ A C AV CCCP  ++N+++ A+
Sbjct: 25  SPSRSNRRQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAI 84

Query: 69  YRIPAGLCRKALNRRKRRGKKKYLI------------QQRKAASRDFA-------DGRVG 128
           Y++P G+CR+A+  R+R+   K  I             QR   + +FA       D    
Sbjct: 85  YKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDD 144

Query: 129 PAMESFEAHKPVG-DVAGGDDLER-----------LEEEMWDRFSQTGFWRSSSQR 149
              ++F   K +G  VA G   E            LE+EMW+RF   GFWRS SQR
Sbjct: 145 EDDDNFLDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQR 200

The following BLAST results are available for this feature:

BLAST of Sed0011955 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63891.1	1.8e-51	71.71	hypothetical protein Csa_014343 [Cucumis sativus]	[more]
XP_038879203.1	1.2e-50	72.55	uncharacterized protein LOC120071168 [Benincasa hispida]	[more]
XP_022933995.1	5.4e-48	67.76	uncharacterized protein LOC111441234 [Cucurbita moschata]	[more]
XP_023531763.1	1.2e-47	67.76	uncharacterized protein LOC111793918 [Cucurbita pepo subsp. pepo]	[more]
KAG6587694.1	1.6e-47	67.11	hypothetical protein SDJN03_16259, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0011955 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0011955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV48	8.6e-52	71.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025240 PE=4 SV=1	[more]
A0A6J1F6E1	2.6e-48	67.76	uncharacterized protein LOC111441234 OS=Cucurbita moschata OX=3662 GN=LOC1114412...	[more]
A0A5D3DY75	3.8e-47	69.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UQK6	4.9e-47	68.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1BZB0	8.9e-41	63.23	uncharacterized protein LOC111006972 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

BLAST of Sed0011955 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27180.1	5.0e-20	40.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06380.1	4.9e-15	40.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G11690.1	2.1e-13	31.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR33264:SF36	SUBFAMILY NOT NAMED	coord: 1..150
None	No IPR available	PANTHER	PTHR33264	EXPRESSED PROTEIN	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011955.1	Sed0011955.1	mRNA