Sed0011952 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCAACTAAATTCTCTTTTTCACGTTGTCTTCATTTCTTTTATCTTTGTAGGTTCTCTATTTCTTCACCACGTCAAATATTATCATGTTTTAAATTATTATTTTAGTTTTTGTGGGTTTTATTTTATTTTGATATTATTGTTCACAATATAGTTAAAAAGAAAGTTTTGAACTGATTTTTTTTAGTTGGATTAAAATTCTCAAAAATATCTTAAATTAACTGAATAGATAATAGCTTTCTTACTATTCTAACAAGACTTGGACAAATATTATAAAAAAACATATTCTTATTTATGACATTTTTGTTGTTGTTGCATAGTTGCACTGATTTTGGCTCCCCAAAAAGTCTCCGCTGTTCAAAGATGCCAGGAAATATTGAACAACAGTGGTTGCATATTGAAAGACTGTGGACAGAAATGTTGGGAGAAACACTTTTCTATGTCATTAAAATGCATTCCCACCGATCTTAAGCAAACCATCTATGCTTGTTTTTGTTTCTTTGATTGTGGTCAAAATTGA ATGGCGCAACTAAATTCTCTTTTTCACGTTGTCTTCATTTCTTTTATCTTTGTAGTTGCACTGATTTTGGCTCCCCAAAAAGTCTCCGCTGTTCAAAGATGCCAGGAAATATTGAACAACAGTGGTTGCATATTGAAAGACTGTGGACAGAAATGTTGGGAGAAACACTTTTCTATGTCATTAAAATGCATTCCCACCGATCTTAAGCAAACCATCTATGCTTGTTTTTGTTTCTTTGATTGTGGTCAAAATTGA ATGGCGCAACTAAATTCTCTTTTTCACGTTGTCTTCATTTCTTTTATCTTTGTAGTTGCACTGATTTTGGCTCCCCAAAAAGTCTCCGCTGTTCAAAGATGCCAGGAAATATTGAACAACAGTGGTTGCATATTGAAAGACTGTGGACAGAAATGTTGGGAGAAACACTTTTCTATGTCATTAAAATGCATTCCCACCGATCTTAAGCAAACCATCTATGCTTGTTTTTGTTTCTTTGATTGTGGTCAAAATTGA MAQLNSLFHVVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCGQN Homology
BLAST of Sed0011952 vs. NCBI nr
Match: KAE8649772.1 (hypothetical protein Csa_012405, partial [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 8.5e-19 Identity = 43/63 (68.25%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Sed0011952 vs. NCBI nr
Match: KAA0042348.1 (S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa] >TYK15471.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]) HSP 1 Score: 101.3 bits (251), Expect = 4.2e-18 Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of Sed0011952 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_022748 [Cucumis sativus]) HSP 1 Score: 93.6 bits (231), Expect = 8.8e-16 Identity = 44/73 (60.27%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Sed0011952 vs. NCBI nr
Match: BBH07492.1 (hypothetical protein Prudu_019451 [Prunus dulcis]) HSP 1 Score: 67.4 bits (163), Expect = 6.7e-08 Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of Sed0011952 vs. NCBI nr
Match: XP_012090834.1 (defensin-like protein 156 [Jatropha curcas]) HSP 1 Score: 66.2 bits (160), Expect = 1.5e-07 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of Sed0011952 vs. ExPASy TrEMBL
Match: A0A0A0L2R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G576870 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.2e-20 Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Sed0011952 vs. ExPASy TrEMBL
Match: A0A5A7THQ7 (S locus-related glycoprotein 1 binding pollen coat OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00450 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18 Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of Sed0011952 vs. ExPASy TrEMBL
Match: A0A0A0LVZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172580 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.2e-16 Identity = 44/73 (60.27%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Sed0011952 vs. ExPASy TrEMBL
Match: A0A0A0KYP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507400 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.1e-11 Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Sed0011952 vs. ExPASy TrEMBL
Match: A0A4Y1RT05 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_019451 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.3e-08 Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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