Sed0011892 (gene) Chayote v1

Overview
NameSed0011892
Typegene
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
LocationLG03: 1371487 .. 1372316 (+)
RNA-Seq ExpressionSed0011892
SyntenySed0011892
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAAATCATCTCAACACAAACACACAAAAAAAAAACATTACTACCATCGAATTGAATCCTTCCATTTCTTCCAAAAACCAAATGGATTCCAGCCTCGACACCAAAACAACAATCACCCTCGATTTCTTTCGATTCCACAAACTCGCCTCGTGGCTCTACGCATTCGTCTCCCGAAAGTCCTCGGTTTCGAAAACCGACAAACTGGATAGACCGGCAAAGGGCAGCGACAGAGACGGTAGCGAGGGGCTGAACAGAGAGGAGATGAGATTGGTGATGGGGAAATTGGGGGTTCCTTGTAGCAAGGAATCCGAGGAATCGCTTCCTATGTTTGCGTCCGCTGAAGAGATGTCGAAACTGTTCGAGGAAAGGCCGGCGTGTGCGGCCGAGGTGAAGGGAGCTTTCGATGTGTTCGATGTGAATGGCGACGGGTTCATCGATGTCGGGGAGTTGCAGCGAGTGCTCTGTGTTTTGGGGTTGAAGGAAGGGGAAGGGGAAGGGGTTGAGAATTGTAGGAGGATGATTCGGAAGTTTGATCACAATGGCGATGGCAACATTGATTTTGATGAGTTTCTCAACTTGATGGAGTCTGTGAATTGAAGTTATTACTATTTTTTTTTTAATTCGTTTATTTGTTTTTTTAATAATTATTGTATTGTGGTCGAAATTGAAGCCTTTTGCCCCTTCGATCTTGTTTTGTGCATAAGCAAAATCGAGATAGTTTCTTGTTTTTTGGGATAAATGGAATTGAAATTTTGGCCCATCTTATATTTATAACTTTGTTATTTTATATTTATATCTTTTTTAATTCAATAACAACACAGTTAGTATA

mRNA sequence

CCCAAATCATCTCAACACAAACACACAAAAAAAAAACATTACTACCATCGAATTGAATCCTTCCATTTCTTCCAAAAACCAAATGGATTCCAGCCTCGACACCAAAACAACAATCACCCTCGATTTCTTTCGATTCCACAAACTCGCCTCGTGGCTCTACGCATTCGTCTCCCGAAAGTCCTCGGTTTCGAAAACCGACAAACTGGATAGACCGGCAAAGGGCAGCGACAGAGACGGTAGCGAGGGGCTGAACAGAGAGGAGATGAGATTGGTGATGGGGAAATTGGGGGTTCCTTGTAGCAAGGAATCCGAGGAATCGCTTCCTATGTTTGCGTCCGCTGAAGAGATGTCGAAACTGTTCGAGGAAAGGCCGGCGTGTGCGGCCGAGGTGAAGGGAGCTTTCGATGTGTTCGATGTGAATGGCGACGGGTTCATCGATGTCGGGGAGTTGCAGCGAGTGCTCTGTGTTTTGGGGTTGAAGGAAGGGGAAGGGGAAGGGGTTGAGAATTGTAGGAGGATGATTCGGAAGTTTGATCACAATGGCGATGGCAACATTGATTTTGATGAGTTTCTCAACTTGATGGAGTCTGTGAATTGAAGTTATTACTATTTTTTTTTTAATTCGTTTATTTGTTTTTTTAATAATTATTGTATTGTGGTCGAAATTGAAGCCTTTTGCCCCTTCGATCTTGTTTTGTGCATAAGCAAAATCGAGATAGTTTCTTGTTTTTTGGGATAAATGGAATTGAAATTTTGGCCCATCTTATATTTATAACTTTGTTATTTTATATTTATATCTTTTTTAATTCAATAACAACACAGTTAGTATA

Coding sequence (CDS)

ATGGATTCCAGCCTCGACACCAAAACAACAATCACCCTCGATTTCTTTCGATTCCACAAACTCGCCTCGTGGCTCTACGCATTCGTCTCCCGAAAGTCCTCGGTTTCGAAAACCGACAAACTGGATAGACCGGCAAAGGGCAGCGACAGAGACGGTAGCGAGGGGCTGAACAGAGAGGAGATGAGATTGGTGATGGGGAAATTGGGGGTTCCTTGTAGCAAGGAATCCGAGGAATCGCTTCCTATGTTTGCGTCCGCTGAAGAGATGTCGAAACTGTTCGAGGAAAGGCCGGCGTGTGCGGCCGAGGTGAAGGGAGCTTTCGATGTGTTCGATGTGAATGGCGACGGGTTCATCGATGTCGGGGAGTTGCAGCGAGTGCTCTGTGTTTTGGGGTTGAAGGAAGGGGAAGGGGAAGGGGTTGAGAATTGTAGGAGGATGATTCGGAAGTTTGATCACAATGGCGATGGCAACATTGATTTTGATGAGTTTCTCAACTTGATGGAGTCTGTGAATTGA

Protein sequence

MDSSLDTKTTITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESVN
Homology
BLAST of Sed0011892 vs. NCBI nr
Match: XP_038889669.1 (probable calcium-binding protein CML46 [Benincasa hispida])

HSP 1 Score: 181.0 bits (458), Expect = 8.5e-42
Identity = 101/177 (57.06%), Postives = 119/177 (67.23%), Query Frame = 0

Query: 4   SLDTKTT---------ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSE 63
           S+D KTT         I +DF RF KLASWLYAF + K    K       +K  +  G E
Sbjct: 9   SMDDKTTTQNPSFRFLIVIDFLRFQKLASWLYAFATTK---QKPSSFPATSKTEEHGGEE 68

Query: 64  GL-NREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVN 123
            L   EEM+ VMG LG+ C    EES+P+F S EE++++F+ER A   EVK AFDVFDVN
Sbjct: 69  RLMTTEEMKWVMGNLGIDC---GEESVPLFGSTEEVAEMFDERAASTVEVKKAFDVFDVN 128

Query: 124 GDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV 171
           GDGFID  ELQRV+CVLG K  EGE ++NC RMIRKFDHNGDG IDF+EFL LMESV
Sbjct: 129 GDGFIDSEELQRVMCVLGFK--EGERIQNCERMIRKFDHNGDGRIDFEEFLKLMESV 177

BLAST of Sed0011892 vs. NCBI nr
Match: XP_022133625.1 (probable calcium-binding protein CML45 [Momordica charantia])

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-41
Identity = 96/159 (60.38%), Postives = 115/159 (72.33%), Query Frame = 0

Query: 11  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGV 70
           I +D   F KL SWL A     +S   +++   P   +  DG E ++REEM+ VMG LG+
Sbjct: 26  IMIDCLVFQKLTSWLSATYHGFASTRNSNRCS-PIPKAVVDGGESVSREEMKSVMGDLGI 85

Query: 71  PCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVL 130
            C +E +ESLP+F S EE++KLFEER  C AEVK AFDVFD NGDGFIDV ELQRVLCVL
Sbjct: 86  VCGEEGDESLPLFGSVEEIAKLFEERGPCIAEVKRAFDVFDANGDGFIDVVELQRVLCVL 145

Query: 131 GLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           GLK  EGEGVENC+RMI+KFD N DG IDF+EF+ LMES
Sbjct: 146 GLK--EGEGVENCKRMIQKFDENEDGKIDFEEFVKLMES 181

BLAST of Sed0011892 vs. NCBI nr
Match: XP_022993675.1 (probable calcium-binding protein CML30 [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 2.7e-40
Identity = 94/159 (59.12%), Postives = 111/159 (69.81%), Query Frame = 0

Query: 11  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGV 70
           I +D FRF KL SWLYAF S K         +       ++G E ++REEM+ VM +LG+
Sbjct: 16  IMIDCFRFQKLGSWLYAFASGKRKQWSLPASETAKSEQRKEGGERVSREEMKWVMEELGL 75

Query: 71  PCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVL 130
              +E+EESLP FAS EEM K+F++  A AAEVK AFDVFDVN DGFIDV ELQRVLCVL
Sbjct: 76  SWGEETEESLPGFASMEEMCKIFDQTAASAAEVKEAFDVFDVNSDGFIDVEELQRVLCVL 135

Query: 131 GLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           G K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Sbjct: 136 GFK--EGEAIQNCRRMINKFDENNDGRIDFQEFVKLMES 172

BLAST of Sed0011892 vs. NCBI nr
Match: XP_022939128.1 (probable calcium-binding protein CML45 [Cucurbita moschata])

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-39
Identity = 96/160 (60.00%), Postives = 113/160 (70.62%), Query Frame = 0

Query: 11  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRD-GSEGLNREEMRLVMGKLG 70
           I +D FRF KL SWLYAF + K     +      AK   RD G E ++REEM+ VMG+LG
Sbjct: 16  IMIDCFRFQKLGSWLYAFATGKRK-QWSLPASETAKSEQRDEGGERVSREEMKWVMGELG 75

Query: 71  VPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCV 130
           +   +E+EESLP FAS EEM ++F++  A AAEVK AFDVFDVN DGFID  ELQRVLCV
Sbjct: 76  LSSEEETEESLPGFASMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDELQRVLCV 135

Query: 131 LGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           LG K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Sbjct: 136 LGFK--EGEAIQNCRRMINKFDENNDGRIDFQEFVKLMES 172

BLAST of Sed0011892 vs. NCBI nr
Match: KAG6578574.1 (putative calcium-binding protein CML46, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-39
Identity = 92/159 (57.86%), Postives = 110/159 (69.18%), Query Frame = 0

Query: 11  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGV 70
           I +D FRF KL SWLYAF + K         +        +G E ++REEM+ VMG+LG+
Sbjct: 16  IMIDCFRFQKLGSWLYAFATGKRKQWSLPASETGKSEQRDEGGERVSREEMKWVMGELGL 75

Query: 71  PCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVL 130
              +E+EESLP FAS EEM ++F++  A AAEVK AFDVFDVN DGFID  ELQRVLCVL
Sbjct: 76  SSEEETEESLPGFASMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDELQRVLCVL 135

Query: 131 GLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           G K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Sbjct: 136 GFK--EGEAIQNCRRMINKFDENNDGRIDFQEFVKLMES 172

BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q93Z27 (Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-22
Identity = 72/167 (43.11%), Postives = 97/167 (58.08%), Query Frame = 0

Query: 13  LDFFRFHKLA----SWLYAFVSRKSSVSKTDKLDRPAKGSDR------DGSEGLNREEMR 72
           + FFR+   A    S  +  V  +  VS+    D   + S +      D  +GL RE++ 
Sbjct: 38  IGFFRWVSFAQLFFSRFWPLVQHQQCVSEKKSKDLEFQTSIKHEEYRDDDDDGLCREDVG 97

Query: 73  LVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGE 132
           +VM  LG+   +E+ E L    S++E+S LFEE+     EVK AFDVFD N DGFID  +
Sbjct: 98  MVMKSLGLSTDQEN-EGLQKQYSSKEVSNLFEEKEPSLEEVKQAFDVFDENRDGFIDPID 157

Query: 133 LQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           LQRVL +LGLK  +G  +ENCRRMIR FD + DG IDF  F+  ME+
Sbjct: 158 LQRVLTILGLK--QGSNLENCRRMIRSFDGSKDGRIDFYGFVKFMEN 201

BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q9MBG5 (Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20
Identity = 60/121 (49.59%), Postives = 77/121 (63.64%), Query Frame = 0

Query: 49  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFD 108
           D D    ++REE  +VM  LG+     +++ L    SA+E+S LFEE+ A   EVK AFD
Sbjct: 76  DDDDDIDISREEAEMVMRSLGL---FYNDDQLQEQYSAKEVSSLFEEKEASLEEVKQAFD 135

Query: 109 VFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLME 168
           VFD N DGFID  ELQRVL +LG K  +G  ++NC  MIR  D N DG IDF+EF+  ME
Sbjct: 136 VFDENKDGFIDAIELQRVLTILGFK--QGSYLDNCLVMIRSLDGNKDGKIDFNEFVKFME 191

Query: 169 S 170
           +
Sbjct: 196 T 191

BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q0JC44 (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica OX=39947 GN=CML22 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-14
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 0

Query: 30  SRKSSVSKTD--KLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASA- 89
           S+K    + D  +L R  +  DR+G   + REE+   +GKLG+P   +   ++     A 
Sbjct: 80  SKKKQQQQADAAELARVFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDAN 139

Query: 90  -------EEMSKLF----------------EERPACAAEVKGAFDVFDVNGDGFIDVGEL 149
                  EE  +L+                EE      +++ AF VFD NGDG+I V EL
Sbjct: 140 GDGCVDVEEFGELYRSIMAGGDDSKDGRAKEEEEEEDGDMREAFRVFDANGDGYITVDEL 199

Query: 150 QRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLM 168
             VL  LGLK  +G   E CRRMI + D +GDG +DF EFL +M
Sbjct: 200 GAVLASLGLK--QGRTAEECRRMIGQVDRDGDGRVDFHEFLQMM 241

BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q0DZP5 (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 GN=CML17 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.6e-13
Identity = 53/141 (37.59%), Postives = 73/141 (51.77%), Query Frame = 0

Query: 49  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASA--------EEMSKLFEE----- 108
           DRDG   + REE+   + +LG+P  +E   +      A        +E ++L+E      
Sbjct: 17  DRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQLYETVMRVD 76

Query: 109 ------RPAC---AAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRM 168
                   AC    A ++ AFDVFD NGDGFI V EL  VL  LG+K  +G   E+C RM
Sbjct: 77  GGGGGGGGACDVDEASMREAFDVFDRNGDGFITVDELGAVLASLGIK--QGRTAEDCGRM 136

BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-11
Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 92  LFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFD 151
           + +E      ++K AF+VFD NGDGFI V EL+ VL  LGLK  +G+ +++C++MI+K D
Sbjct: 69  IMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLK--QGKTLDDCKKMIKKVD 128

Query: 152 HNGDGNIDFDEFLNLME 169
            +GDG +++ EF  +M+
Sbjct: 129 VDGDGRVNYKEFRQMMK 143

BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A6J1BVS4 (probable calcium-binding protein CML45 OS=Momordica charantia OX=3673 GN=LOC111006164 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 96/159 (60.38%), Postives = 115/159 (72.33%), Query Frame = 0

Query: 11  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGV 70
           I +D   F KL SWL A     +S   +++   P   +  DG E ++REEM+ VMG LG+
Sbjct: 26  IMIDCLVFQKLTSWLSATYHGFASTRNSNRCS-PIPKAVVDGGESVSREEMKSVMGDLGI 85

Query: 71  PCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVL 130
            C +E +ESLP+F S EE++KLFEER  C AEVK AFDVFD NGDGFIDV ELQRVLCVL
Sbjct: 86  VCGEEGDESLPLFGSVEEIAKLFEERGPCIAEVKRAFDVFDANGDGFIDVVELQRVLCVL 145

Query: 131 GLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           GLK  EGEGVENC+RMI+KFD N DG IDF+EF+ LMES
Sbjct: 146 GLK--EGEGVENCKRMIQKFDENEDGKIDFEEFVKLMES 181

BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A6J1JZ70 (probable calcium-binding protein CML30 OS=Cucurbita maxima OX=3661 GN=LOC111489598 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.3e-40
Identity = 94/159 (59.12%), Postives = 111/159 (69.81%), Query Frame = 0

Query: 11  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGV 70
           I +D FRF KL SWLYAF S K         +       ++G E ++REEM+ VM +LG+
Sbjct: 16  IMIDCFRFQKLGSWLYAFASGKRKQWSLPASETAKSEQRKEGGERVSREEMKWVMEELGL 75

Query: 71  PCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVL 130
              +E+EESLP FAS EEM K+F++  A AAEVK AFDVFDVN DGFIDV ELQRVLCVL
Sbjct: 76  SWGEETEESLPGFASMEEMCKIFDQTAASAAEVKEAFDVFDVNSDGFIDVEELQRVLCVL 135

Query: 131 GLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           G K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Sbjct: 136 GFK--EGEAIQNCRRMINKFDENNDGRIDFQEFVKLMES 172

BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A6J1FKT4 (probable calcium-binding protein CML45 OS=Cucurbita moschata OX=3662 GN=LOC111445127 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 5.0e-40
Identity = 96/160 (60.00%), Postives = 113/160 (70.62%), Query Frame = 0

Query: 11  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRD-GSEGLNREEMRLVMGKLG 70
           I +D FRF KL SWLYAF + K     +      AK   RD G E ++REEM+ VMG+LG
Sbjct: 16  IMIDCFRFQKLGSWLYAFATGKRK-QWSLPASETAKSEQRDEGGERVSREEMKWVMGELG 75

Query: 71  VPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCV 130
           +   +E+EESLP FAS EEM ++F++  A AAEVK AFDVFDVN DGFID  ELQRVLCV
Sbjct: 76  LSSEEETEESLPGFASMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDELQRVLCV 135

Query: 131 LGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           LG K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Sbjct: 136 LGFK--EGEAIQNCRRMINKFDENNDGRIDFQEFVKLMES 172

BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A5A7T9C9 (Putative calcium-binding protein CML30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002800 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 89/160 (55.62%), Postives = 114/160 (71.25%), Query Frame = 0

Query: 11  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGV 70
           I +DF RF  LASWL +F S K   S      +  + S  +    ++ EEM+ VMG LG+
Sbjct: 16  IIIDFLRFQNLASWLCSFASTKLKQSTLPASSKSVESSAGERERLVSTEEMKWVMGNLGM 75

Query: 71  PCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVL 130
            CS+ S  S+P+F SAEE++++F++  A AAEVK AFDVFDVNGDGFIDV ELQRV+CVL
Sbjct: 76  DCSEGS--SVPLFGSAEEVAEMFDQTAASAAEVKQAFDVFDVNGDGFIDVEELQRVMCVL 135

Query: 131 GLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV 171
           G K  EGEG+ENC +MI KFD+N DG IDF+EF+ LME+V
Sbjct: 136 GFK--EGEGIENCEKMISKFDYNKDGRIDFEEFVKLMEAV 171

BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A1S3CAB3 (probable calcium-binding protein CML30 OS=Cucumis melo OX=3656 GN=LOC103498740 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 8.0e-38
Identity = 92/176 (52.27%), Postives = 119/176 (67.61%), Query Frame = 0

Query: 4   SLDTKTT---------ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSE 63
           S+D K+T         I +DF RF  LASWL +F S K   S      +  + S  +   
Sbjct: 9   SMDDKSTPQNPSFRFLIIIDFLRFQNLASWLCSFASTKLKQSTLPASSKSVESSAGERER 68

Query: 64  GLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNG 123
            ++ EEM+ VMG LG+ CS+ S  S+P+F SAEE++++F++  A AAEVK AFDVFDVN 
Sbjct: 69  LVSTEEMKWVMGNLGMDCSEGS--SVPLFGSAEEVAEMFDQTAASAAEVKQAFDVFDVNA 128

Query: 124 DGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV 171
           DGFIDV ELQRV+CVLG K  EGEG+ENC +MI KFD+N DG IDF+EF+ LME+V
Sbjct: 129 DGFIDVEELQRVMCVLGFK--EGEGIENCEKMISKFDYNKDGRIDFEEFVKLMEAV 180

BLAST of Sed0011892 vs. TAIR 10
Match: AT5G39670.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 72/167 (43.11%), Postives = 97/167 (58.08%), Query Frame = 0

Query: 13  LDFFRFHKLA----SWLYAFVSRKSSVSKTDKLDRPAKGSDR------DGSEGLNREEMR 72
           + FFR+   A    S  +  V  +  VS+    D   + S +      D  +GL RE++ 
Sbjct: 38  IGFFRWVSFAQLFFSRFWPLVQHQQCVSEKKSKDLEFQTSIKHEEYRDDDDDGLCREDVG 97

Query: 73  LVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGE 132
           +VM  LG+   +E+ E L    S++E+S LFEE+     EVK AFDVFD N DGFID  +
Sbjct: 98  MVMKSLGLSTDQEN-EGLQKQYSSKEVSNLFEEKEPSLEEVKQAFDVFDENRDGFIDPID 157

Query: 133 LQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES 170
           LQRVL +LGLK  +G  +ENCRRMIR FD + DG IDF  F+  ME+
Sbjct: 158 LQRVLTILGLK--QGSNLENCRRMIRSFDGSKDGRIDFYGFVKFMEN 201

BLAST of Sed0011892 vs. TAIR 10
Match: AT3G29000.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 101.3 bits (251), Expect = 8.0e-22
Identity = 60/121 (49.59%), Postives = 77/121 (63.64%), Query Frame = 0

Query: 49  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFD 108
           D D    ++REE  +VM  LG+     +++ L    SA+E+S LFEE+ A   EVK AFD
Sbjct: 76  DDDDDIDISREEAEMVMRSLGL---FYNDDQLQEQYSAKEVSSLFEEKEASLEEVKQAFD 135

Query: 109 VFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLME 168
           VFD N DGFID  ELQRVL +LG K  +G  ++NC  MIR  D N DG IDF+EF+  ME
Sbjct: 136 VFDENKDGFIDAIELQRVLTILGFK--QGSYLDNCLVMIRSLDGNKDGKIDFNEFVKFME 191

Query: 169 S 170
           +
Sbjct: 196 T 191

BLAST of Sed0011892 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 92  LFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFD 151
           + +E      ++K AF+VFD NGDGFI V EL+ VL  LGLK  +G+ +++C++MI+K D
Sbjct: 69  IMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLK--QGKTLDDCKKMIKKVD 128

Query: 152 HNGDGNIDFDEFLNLME 169
            +GDG +++ EF  +M+
Sbjct: 129 VDGDGRVNYKEFRQMMK 143

BLAST of Sed0011892 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 67.8 bits (164), Expect = 9.8e-12
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 0

Query: 102 EVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFD 161
           ++K AF+VFD +GDGFI V EL+ V+  LGLK  +G+ ++ C++MI + D +GDG +++ 
Sbjct: 143 DMKDAFNVFDQDGDGFITVEELKSVMASLGLK--QGKTLDGCKKMIMQVDADGDGRVNYK 202

Query: 162 EFLNLME 169
           EFL +M+
Sbjct: 203 EFLQMMK 207

BLAST of Sed0011892 vs. TAIR 10
Match: AT3G59440.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 102 EVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFD 161
           +++ AF+VFD +GDGFI V EL  V+  LGLK  +G+ +E C+ MI + D +GDG +++ 
Sbjct: 123 DMRDAFNVFDQDGDGFITVEELNSVMTSLGLK--QGKTLECCKEMIMQVDEDGDGRVNYK 182

Query: 162 EFLNLMES 170
           EFL +M+S
Sbjct: 183 EFLQMMKS 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038889669.18.5e-4257.06probable calcium-binding protein CML46 [Benincasa hispida][more]
XP_022133625.12.5e-4160.38probable calcium-binding protein CML45 [Momordica charantia][more]
XP_022993675.12.7e-4059.12probable calcium-binding protein CML30 [Cucurbita maxima][more]
XP_022939128.11.0e-3960.00probable calcium-binding protein CML45 [Cucurbita moschata][more]
KAG6578574.12.3e-3957.86putative calcium-binding protein CML46, partial [Cucurbita argyrosperma subsp. s... [more]
Match NameE-valueIdentityDescription
Q93Z271.6e-2243.11Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 ... [more]
Q9MBG51.1e-2049.59Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 ... [more]
Q0JC443.5e-1435.37Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q0DZP56.6e-1337.59Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q9LNE72.1e-1144.16Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1BVS41.2e-4160.38probable calcium-binding protein CML45 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1JZ701.3e-4059.12probable calcium-binding protein CML30 OS=Cucurbita maxima OX=3661 GN=LOC1114895... [more]
A0A6J1FKT45.0e-4060.00probable calcium-binding protein CML45 OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A5A7T9C92.1e-3855.63Putative calcium-binding protein CML30 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3CAB38.0e-3852.27probable calcium-binding protein CML30 OS=Cucumis melo OX=3656 GN=LOC103498740 P... [more]
Match NameE-valueIdentityDescription
AT5G39670.11.1e-2343.11Calcium-binding EF-hand family protein [more]
AT3G29000.18.0e-2249.59Calcium-binding EF-hand family protein [more]
AT1G05990.11.5e-1244.16EF hand calcium-binding protein family [more]
AT2G43290.19.8e-1246.27Calcium-binding EF-hand family protein [more]
AT3G59440.11.3e-1147.06Calcium-binding EF-hand family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 40..68
e-value: 88.0
score: 2.1
coord: 102..130
e-value: 0.0048
score: 26.1
coord: 142..170
e-value: 4.8E-5
score: 32.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 103..167
e-value: 1.6E-13
score: 50.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 138..171
score: 14.708673
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 98..133
score: 13.592857
IPR002048EF-hand domainCDDcd00051EFhcoord: 102..167
e-value: 1.71424E-15
score: 65.2617
NoneNo IPR availableGENE3D1.10.238.10coord: 73..171
e-value: 3.9E-21
score: 77.7
NoneNo IPR availablePANTHERPTHR10891:SF805CALCIUM-BINDING PROTEIN CML45-RELATEDcoord: 30..169
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 30..169
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 151..163
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 111..123
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 48..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0011892.1Sed0011892.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding