Sed0011892 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAATCATCTCAACACAAACACACAAAAAAAAAACATTACTACCATCGAATTGAATCCTTCCATTTCTTCCAAAAACCAAATGGATTCCAGCCTCGACACCAAAACAACAATCACCCTCGATTTCTTTCGATTCCACAAACTCGCCTCGTGGCTCTACGCATTCGTCTCCCGAAAGTCCTCGGTTTCGAAAACCGACAAACTGGATAGACCGGCAAAGGGCAGCGACAGAGACGGTAGCGAGGGGCTGAACAGAGAGGAGATGAGATTGGTGATGGGGAAATTGGGGGTTCCTTGTAGCAAGGAATCCGAGGAATCGCTTCCTATGTTTGCGTCCGCTGAAGAGATGTCGAAACTGTTCGAGGAAAGGCCGGCGTGTGCGGCCGAGGTGAAGGGAGCTTTCGATGTGTTCGATGTGAATGGCGACGGGTTCATCGATGTCGGGGAGTTGCAGCGAGTGCTCTGTGTTTTGGGGTTGAAGGAAGGGGAAGGGGAAGGGGTTGAGAATTGTAGGAGGATGATTCGGAAGTTTGATCACAATGGCGATGGCAACATTGATTTTGATGAGTTTCTCAACTTGATGGAGTCTGTGAATTGAAGTTATTACTATTTTTTTTTTAATTCGTTTATTTGTTTTTTTAATAATTATTGTATTGTGGTCGAAATTGAAGCCTTTTGCCCCTTCGATCTTGTTTTGTGCATAAGCAAAATCGAGATAGTTTCTTGTTTTTTGGGATAAATGGAATTGAAATTTTGGCCCATCTTATATTTATAACTTTGTTATTTTATATTTATATCTTTTTTAATTCAATAACAACACAGTTAGTATA CCCAAATCATCTCAACACAAACACACAAAAAAAAAACATTACTACCATCGAATTGAATCCTTCCATTTCTTCCAAAAACCAAATGGATTCCAGCCTCGACACCAAAACAACAATCACCCTCGATTTCTTTCGATTCCACAAACTCGCCTCGTGGCTCTACGCATTCGTCTCCCGAAAGTCCTCGGTTTCGAAAACCGACAAACTGGATAGACCGGCAAAGGGCAGCGACAGAGACGGTAGCGAGGGGCTGAACAGAGAGGAGATGAGATTGGTGATGGGGAAATTGGGGGTTCCTTGTAGCAAGGAATCCGAGGAATCGCTTCCTATGTTTGCGTCCGCTGAAGAGATGTCGAAACTGTTCGAGGAAAGGCCGGCGTGTGCGGCCGAGGTGAAGGGAGCTTTCGATGTGTTCGATGTGAATGGCGACGGGTTCATCGATGTCGGGGAGTTGCAGCGAGTGCTCTGTGTTTTGGGGTTGAAGGAAGGGGAAGGGGAAGGGGTTGAGAATTGTAGGAGGATGATTCGGAAGTTTGATCACAATGGCGATGGCAACATTGATTTTGATGAGTTTCTCAACTTGATGGAGTCTGTGAATTGAAGTTATTACTATTTTTTTTTTAATTCGTTTATTTGTTTTTTTAATAATTATTGTATTGTGGTCGAAATTGAAGCCTTTTGCCCCTTCGATCTTGTTTTGTGCATAAGCAAAATCGAGATAGTTTCTTGTTTTTTGGGATAAATGGAATTGAAATTTTGGCCCATCTTATATTTATAACTTTGTTATTTTATATTTATATCTTTTTTAATTCAATAACAACACAGTTAGTATA ATGGATTCCAGCCTCGACACCAAAACAACAATCACCCTCGATTTCTTTCGATTCCACAAACTCGCCTCGTGGCTCTACGCATTCGTCTCCCGAAAGTCCTCGGTTTCGAAAACCGACAAACTGGATAGACCGGCAAAGGGCAGCGACAGAGACGGTAGCGAGGGGCTGAACAGAGAGGAGATGAGATTGGTGATGGGGAAATTGGGGGTTCCTTGTAGCAAGGAATCCGAGGAATCGCTTCCTATGTTTGCGTCCGCTGAAGAGATGTCGAAACTGTTCGAGGAAAGGCCGGCGTGTGCGGCCGAGGTGAAGGGAGCTTTCGATGTGTTCGATGTGAATGGCGACGGGTTCATCGATGTCGGGGAGTTGCAGCGAGTGCTCTGTGTTTTGGGGTTGAAGGAAGGGGAAGGGGAAGGGGTTGAGAATTGTAGGAGGATGATTCGGAAGTTTGATCACAATGGCGATGGCAACATTGATTTTGATGAGTTTCTCAACTTGATGGAGTCTGTGAATTGA MDSSLDTKTTITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESVN Homology
BLAST of Sed0011892 vs. NCBI nr
Match: XP_038889669.1 (probable calcium-binding protein CML46 [Benincasa hispida]) HSP 1 Score: 181.0 bits (458), Expect = 8.5e-42 Identity = 101/177 (57.06%), Postives = 119/177 (67.23%), Query Frame = 0
BLAST of Sed0011892 vs. NCBI nr
Match: XP_022133625.1 (probable calcium-binding protein CML45 [Momordica charantia]) HSP 1 Score: 179.5 bits (454), Expect = 2.5e-41 Identity = 96/159 (60.38%), Postives = 115/159 (72.33%), Query Frame = 0
BLAST of Sed0011892 vs. NCBI nr
Match: XP_022993675.1 (probable calcium-binding protein CML30 [Cucurbita maxima]) HSP 1 Score: 176.0 bits (445), Expect = 2.7e-40 Identity = 94/159 (59.12%), Postives = 111/159 (69.81%), Query Frame = 0
BLAST of Sed0011892 vs. NCBI nr
Match: XP_022939128.1 (probable calcium-binding protein CML45 [Cucurbita moschata]) HSP 1 Score: 174.1 bits (440), Expect = 1.0e-39 Identity = 96/160 (60.00%), Postives = 113/160 (70.62%), Query Frame = 0
BLAST of Sed0011892 vs. NCBI nr
Match: KAG6578574.1 (putative calcium-binding protein CML46, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.9 bits (437), Expect = 2.3e-39 Identity = 92/159 (57.86%), Postives = 110/159 (69.18%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q93Z27 (Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.6e-22 Identity = 72/167 (43.11%), Postives = 97/167 (58.08%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q9MBG5 (Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20 Identity = 60/121 (49.59%), Postives = 77/121 (63.64%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q0JC44 (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica OX=39947 GN=CML22 PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.5e-14 Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q0DZP5 (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 GN=CML17 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.6e-13 Identity = 53/141 (37.59%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.1e-11 Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A6J1BVS4 (probable calcium-binding protein CML45 OS=Momordica charantia OX=3673 GN=LOC111006164 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41 Identity = 96/159 (60.38%), Postives = 115/159 (72.33%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A6J1JZ70 (probable calcium-binding protein CML30 OS=Cucurbita maxima OX=3661 GN=LOC111489598 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.3e-40 Identity = 94/159 (59.12%), Postives = 111/159 (69.81%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A6J1FKT4 (probable calcium-binding protein CML45 OS=Cucurbita moschata OX=3662 GN=LOC111445127 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 5.0e-40 Identity = 96/160 (60.00%), Postives = 113/160 (70.62%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A5A7T9C9 (Putative calcium-binding protein CML30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002800 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38 Identity = 89/160 (55.62%), Postives = 114/160 (71.25%), Query Frame = 0
BLAST of Sed0011892 vs. ExPASy TrEMBL
Match: A0A1S3CAB3 (probable calcium-binding protein CML30 OS=Cucumis melo OX=3656 GN=LOC103498740 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 8.0e-38 Identity = 92/176 (52.27%), Postives = 119/176 (67.61%), Query Frame = 0
BLAST of Sed0011892 vs. TAIR 10
Match: AT5G39670.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23 Identity = 72/167 (43.11%), Postives = 97/167 (58.08%), Query Frame = 0
BLAST of Sed0011892 vs. TAIR 10
Match: AT3G29000.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 101.3 bits (251), Expect = 8.0e-22 Identity = 60/121 (49.59%), Postives = 77/121 (63.64%), Query Frame = 0
BLAST of Sed0011892 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family ) HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12 Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of Sed0011892 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 67.8 bits (164), Expect = 9.8e-12 Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of Sed0011892 vs. TAIR 10
Match: AT3G59440.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11 Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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