Homology
BLAST of Sed0011841 vs. NCBI nr
Match:
XP_023528132.1 (nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528141.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528149.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1112.1 bits (2875), Expect = 0.0e+00
Identity = 694/1111 (62.47%), Postives = 797/1111 (71.74%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
M TAR+Q + EEE LRTAGKF D RF RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MVTAREQ----KSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFR--------RLASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR R++S ESSQSR+DDKK D T PFE QV NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSRISSPESSQSRRDDKKADVTDPFEVQVAAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++PNSEV M RQS TPIL+SSVLDEDISSPA+IARAYM S+ K+CPS+ S R
Sbjct: 181 NRSEFKKIPNSEVRMCRQSFPTPILSSSVLDEDISSPAKIARAYMGSRQPKICPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSAG S SFSSKS D+LLVPS+T+QGLKRRSSF ++HIG +P R IRQK NI
Sbjct: 241 AQGLGENSAGPTSSSFSSKSADMLLVPSSTSQGLKRRSSFFHNHIGPNVPLRRIRQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
LSKGLSLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL KPK + RK I
Sbjct: 301 LLSKGLSLPVSTRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSHKPKKNSARKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES++I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDNIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-D 540
HRCALLK+SGSIG + DS +L VPA AVVKSIIQPP NK AFQM PDKD +DHDESS D
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMWPDKDRVDHDESSPD 540
Query: 541 HIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED 600
I PATAE E D LA+RQ TANEAL P+ SQT SEVIVDSPLNRSSD KT + + +D
Sbjct: 541 RIAPATAEDREGDISLAVRQTTANEALTPSKSQTASEVIVDSPLNRSSDLKTSEGSVHDD 600
Query: 601 MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HT 660
M T FT Q A SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK +
Sbjct: 601 MDTSFTFQIA-----PSQPETIDSAPTNSYGNNDLPEKKRIDSPVFSFGNNVSPRKQPNA 660
Query: 661 SLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELD 720
S T FD GNK+AS TE A +N N AP PYTQ NPASSYSD+Q SVYL+A SSNH+LD
Sbjct: 661 SSTAFDVGNKNASRTELCAASENGNAAPFPYTQWNPASSYSDLQGSVYLDAVASSNHKLD 720
Query: 721 RSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSS 780
SWGTCNDAF SF S+AR QS +G SISCPS +SS S QSSS
Sbjct: 721 CSWGTCNDAFSSSASISAGLAVSFCSTARYQSLNSGLSISCPSQYSSRSPLTPSMGQSSS 780
Query: 781 RNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYF 840
R IFLSA T D HPSTTN+ S APS GL T+E++IKQDAS + N+TYF
Sbjct: 781 RYIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYF 840
Query: 841 NSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP 900
+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+
Sbjct: 841 SSISTPANSHYNMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGVSAGKEFTANAEQTS 900
Query: 901 MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIG 960
++ S M +ASS MAGK+S SS ISFGC S ASELF+ G PSEFPI G T PA+S +G
Sbjct: 901 IIMGSFMSHASSVMAGKASISSGISFGCPSPASELFHSGGRPSEFPITGFTRAPASSALG 960
Query: 961 TSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQ 1020
TS +TS T LGFES SFSSIC TTS+A A+ SS K VSSNSHP VA RVS+GNN
Sbjct: 961 TSNFSTSRTYLGFESFAGTSFSSICSTTSAA-AIACSSSKTVSSNSHPTVAFRVSTGNND 1020
Query: 1021 FEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SL 1059
E +G SK+N PLF QKPIPP SSG SF A S NP V K+Q + S
Sbjct: 1021 CEDQGTSKNNVPLFSQKPIPPPSSGFSFGQATSESNPFLVQKQQTLAKPQNSSPYIAHSS 1080
BLAST of Sed0011841 vs. NCBI nr
Match:
KAG7032030.1 (Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 696/1112 (62.59%), Postives = 795/1112 (71.49%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
MATAR + + EEE LRTAGKF D RF RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MATAR----ERKSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFR--------RLASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR R +S ESSQSR+DDKK D T PFE QV NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSRTSSPESSQSRRDDKKADVTDPFEVQVAAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++PNSEV M RQS TPIL+SSVLDEDISSPAEIARAYM S+ K+CPS+ S R
Sbjct: 181 NRNEFKKIPNSEVRMCRQSFPTPILSSSVLDEDISSPAEIARAYMGSRQPKICPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSA S SFSSKSTD+LLVPS+T QGLKRRSSF +HI +P R I QK NI
Sbjct: 241 AQGLGENSARPTSTSFSSKSTDMLLVPSSTNQGLKRRSSFFDNHIEPNVPLRRIGQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
HLSKGLSLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK + RK I
Sbjct: 301 HLSKGLSLPVSTRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSARKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES++I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDNIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMV-PDKDSLDHDESS- 540
HRCALLK+SGSIG + DS +L VPA AVVKSIIQPP NK AFQM+ PDKD +DHDESS
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMLWPDKDRVDHDESSP 540
Query: 541 DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDE 600
D + PATAE E D LALRQ TANEALAP+ QT SEVIV SPLNRSSD KT + + +
Sbjct: 541 DRVAPATAEDREGDISLALRQTTANEALAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHD 600
Query: 601 DMVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--H 660
DM T FT Q A SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK +
Sbjct: 601 DMDTSFTFQIA-----PSQPETIDSAPTNSFGNNDLPEKKRIDSPVFSFGNNVSPRKQPN 660
Query: 661 TSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHEL 720
S T FD GNKDAS TE AP+N NGAP PYTQ NPASSYSDVQ SVYLNA SSNH+L
Sbjct: 661 ASSTAFDVGNKDASRTELCAAPENGNGAPFPYTQWNPASSYSDVQGSVYLNAVASSNHKL 720
Query: 721 DRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSS 780
D SWGTCNDAF SF S+AR QS NG SISCPS +SS S QSS
Sbjct: 721 DCSWGTCNDAFSSSASISAGLGVSFCSTARYQSLNNGLSISCPSQYSSCSLLTPSMGQSS 780
Query: 781 SRNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTY 840
SR IFLSA T HPSTTN+ S APS GL T+E++IKQDAS + N+TY
Sbjct: 781 SRYIFLSAKCACNDANITTNGKHPSTTNVITSSAPSAMGLGTHEDEIKQDASLHIANNTY 840
Query: 841 FNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERA 900
F+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ SAGKEF ANAE+
Sbjct: 841 FSSISTPANSHYNMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGASAGKEFTANAEQT 900
Query: 901 PMVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTI 960
++ S M +ASS +AGK+S SS ISFGCSS ASELF+ GS PSEFPI G T PATST
Sbjct: 901 SILMGSFMSHASSVLAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAPATST- 960
Query: 961 GTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNN 1020
+ +T T LGFE+ T ASFSSIC TTS+A A+ GSS K VSSNSHP VA RVS+GN
Sbjct: 961 ---HFSTPRTHLGFETFTGASFSSICSTTSAA-AIAGSSSKTVSSNSHPTVAFRVSTGNK 1020
Query: 1021 QFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------S 1059
E +G SKDN P+F QKP+PP SSG SF A S NP V K+Q + S
Sbjct: 1021 DCEDQGTSKDNVPIFSQKPVPPPSSGFSFGQATSESNPFLVQKQQTLAKPQNSSPYIAHS 1080
BLAST of Sed0011841 vs. NCBI nr
Match:
XP_022956526.1 (nuclear pore complex protein NUP1-like isoform X1 [Cucurbita moschata] >XP_022956527.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita moschata] >XP_022956528.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 695/1111 (62.56%), Postives = 792/1111 (71.29%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
MATAR + + EEE LRTAGKF D RF RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MATAR----ERKSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFR--------RLASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR R +S ESSQSR+DDKK D T PFE QV NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSRTSSPESSQSRRDDKKADVTDPFEVQVAAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++PNSEV M RQS TPIL+SSVLDEDISSPAEIARAYM S+ K+CPS+ S R
Sbjct: 181 NRNEFKKIPNSEVRMCRQSFPTPILSSSVLDEDISSPAEIARAYMGSRQPKICPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSA S SFSSKSTD+LLVPS+T QGLKRRSSF +HIG +P R I QK NI
Sbjct: 241 AQGLGENSARPTSTSFSSKSTDMLLVPSSTNQGLKRRSSFFDNHIGPNVPLRRIGQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
HLSKG SLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK + RK I
Sbjct: 301 HLSKGSSLPVSTRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSTRKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES++I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDNIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-D 540
HRCALLK+SGSIG + DS +L VPA AVVKSIIQPP NK AFQM PDKD +D DESS D
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMWPDKDRVDQDESSPD 540
Query: 541 HIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED 600
+ PATAE E D LA+RQ TANE LAP+ QT SEVIV SPLNRSSD KT + + +D
Sbjct: 541 RVAPATAEDREGDISLAVRQTTANETLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDD 600
Query: 601 MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HT 660
M T FT Q A SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK +
Sbjct: 601 MDTSFTFQIA-----PSQPETIDSAPTNSFGNNDLPEKKRIDSPVFSFGNNVSPRKQPNA 660
Query: 661 SLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELD 720
S T FD GNKDAS TE AP+N NGAP PYTQ NPASSYSDVQ SVYLNA SSNH+LD
Sbjct: 661 SSTAFDVGNKDASRTELCAAPENGNGAPFPYTQWNPASSYSDVQGSVYLNAVASSNHKLD 720
Query: 721 RSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSS 780
SWGTCNDAF SF S+AR QS NG SISCPS +SS S QSSS
Sbjct: 721 CSWGTCNDAFSSSASISAGLAVSFCSTARYQSLNNGLSISCPSQYSSCSLLTPSMGQSSS 780
Query: 781 RNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYF 840
R IFLSA T HPSTTN+ S APS GL T+E++IKQDAS + N+TYF
Sbjct: 781 RYIFLSAKCASNDANITTNGKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYF 840
Query: 841 NSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP 900
+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ SAGKEF ANAE+
Sbjct: 841 SSISTPANSHYNMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGASAGKEFTANAEQTS 900
Query: 901 MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIG 960
++ S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T PATST
Sbjct: 901 ILMGSFMSHASSAMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAPATST-- 960
Query: 961 TSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQ 1020
+ +T T LGFES T ASFSSIC TTS+A A+ SS K VSSNSHP VA RVS+GNN
Sbjct: 961 --HFSTPRTHLGFESFTGASFSSICSTTSAA-AIACSSSKTVSSNSHPTVAFRVSTGNND 1020
Query: 1021 FEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SL 1059
E +G SKDN P+F QKP+PP SSG SF A S NP V K+Q + S
Sbjct: 1021 CEDQGTSKDNVPIFSQKPVPPPSSGFSFGQATSESNPFLVQKQQTLAKPQNSSPYIAHSS 1080
BLAST of Sed0011841 vs. NCBI nr
Match:
XP_023528157.1 (nuclear pore complex protein NUP1-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1098.2 bits (2839), Expect = 0.0e+00
Identity = 690/1111 (62.11%), Postives = 793/1111 (71.38%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
M TAR+Q + EEE LRTAGKF D RF RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MVTAREQ----KSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFR--------RLASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR R++S ESSQSR+DDKK D T V NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSRISSPESSQSRRDDKKADVT------VAAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++PNSEV M RQS TPIL+SSVLDEDISSPA+IARAYM S+ K+CPS+ S R
Sbjct: 181 NRSEFKKIPNSEVRMCRQSFPTPILSSSVLDEDISSPAKIARAYMGSRQPKICPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSAG S SFSSKS D+LLVPS+T+QGLKRRSSF ++HIG +P R IRQK NI
Sbjct: 241 AQGLGENSAGPTSSSFSSKSADMLLVPSSTSQGLKRRSSFFHNHIGPNVPLRRIRQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
LSKGLSLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL KPK + RK I
Sbjct: 301 LLSKGLSLPVSTRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSHKPKKNSARKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES++I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDNIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-D 540
HRCALLK+SGSIG + DS +L VPA AVVKSIIQPP NK AFQM PDKD +DHDESS D
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMWPDKDRVDHDESSPD 540
Query: 541 HIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED 600
I PATAE E D LA+RQ TANEAL P+ SQT SEVIVDSPLNRSSD KT + + +D
Sbjct: 541 RIAPATAEDREGDISLAVRQTTANEALTPSKSQTASEVIVDSPLNRSSDLKTSEGSVHDD 600
Query: 601 MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HT 660
M T FT Q A SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK +
Sbjct: 601 MDTSFTFQIA-----PSQPETIDSAPTNSYGNNDLPEKKRIDSPVFSFGNNVSPRKQPNA 660
Query: 661 SLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELD 720
S T FD GNK+AS TE A +N N AP PYTQ NPASSYSD+Q SVYL+A SSNH+LD
Sbjct: 661 SSTAFDVGNKNASRTELCAASENGNAAPFPYTQWNPASSYSDLQGSVYLDAVASSNHKLD 720
Query: 721 RSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSS 780
SWGTCNDAF SF S+AR QS +G SISCPS +SS S QSSS
Sbjct: 721 CSWGTCNDAFSSSASISAGLAVSFCSTARYQSLNSGLSISCPSQYSSRSPLTPSMGQSSS 780
Query: 781 RNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYF 840
R IFLSA T D HPSTTN+ S APS GL T+E++IKQDAS + N+TYF
Sbjct: 781 RYIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYF 840
Query: 841 NSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP 900
+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+
Sbjct: 841 SSISTPANSHYNMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGVSAGKEFTANAEQTS 900
Query: 901 MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIG 960
++ S M +ASS MAGK+S SS ISFGC S ASELF+ G PSEFPI G T PA+S +G
Sbjct: 901 IIMGSFMSHASSVMAGKASISSGISFGCPSPASELFHSGGRPSEFPITGFTRAPASSALG 960
Query: 961 TSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQ 1020
TS +TS T LGFES SFSSIC TTS+A A+ SS K VSSNSHP VA RVS+GNN
Sbjct: 961 TSNFSTSRTYLGFESFAGTSFSSICSTTSAA-AIACSSSKTVSSNSHPTVAFRVSTGNND 1020
Query: 1021 FEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SL 1059
E +G SK+N PLF QKPIPP SSG SF A S NP V K+Q + S
Sbjct: 1021 CEDQGTSKNNVPLFSQKPIPPPSSGFSFGQATSESNPFLVQKQQTLAKPQNSSPYIAHSS 1080
BLAST of Sed0011841 vs. NCBI nr
Match:
XP_022956529.1 (nuclear pore complex protein NUP1-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 1094.0 bits (2828), Expect = 0.0e+00
Identity = 691/1111 (62.20%), Postives = 788/1111 (70.93%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
MATAR + + EEE LRTAGKF D RF RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MATAR----ERKSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFR--------RLASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR R +S ESSQSR+DDKK D T V NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSRTSSPESSQSRRDDKKADVT------VAAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++PNSEV M RQS TPIL+SSVLDEDISSPAEIARAYM S+ K+CPS+ S R
Sbjct: 181 NRNEFKKIPNSEVRMCRQSFPTPILSSSVLDEDISSPAEIARAYMGSRQPKICPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSA S SFSSKSTD+LLVPS+T QGLKRRSSF +HIG +P R I QK NI
Sbjct: 241 AQGLGENSARPTSTSFSSKSTDMLLVPSSTNQGLKRRSSFFDNHIGPNVPLRRIGQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
HLSKG SLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK + RK I
Sbjct: 301 HLSKGSSLPVSTRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSTRKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES++I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDNIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-D 540
HRCALLK+SGSIG + DS +L VPA AVVKSIIQPP NK AFQM PDKD +D DESS D
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMWPDKDRVDQDESSPD 540
Query: 541 HIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED 600
+ PATAE E D LA+RQ TANE LAP+ QT SEVIV SPLNRSSD KT + + +D
Sbjct: 541 RVAPATAEDREGDISLAVRQTTANETLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDD 600
Query: 601 MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HT 660
M T FT Q A SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK +
Sbjct: 601 MDTSFTFQIA-----PSQPETIDSAPTNSFGNNDLPEKKRIDSPVFSFGNNVSPRKQPNA 660
Query: 661 SLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELD 720
S T FD GNKDAS TE AP+N NGAP PYTQ NPASSYSDVQ SVYLNA SSNH+LD
Sbjct: 661 SSTAFDVGNKDASRTELCAAPENGNGAPFPYTQWNPASSYSDVQGSVYLNAVASSNHKLD 720
Query: 721 RSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSS 780
SWGTCNDAF SF S+AR QS NG SISCPS +SS S QSSS
Sbjct: 721 CSWGTCNDAFSSSASISAGLAVSFCSTARYQSLNNGLSISCPSQYSSCSLLTPSMGQSSS 780
Query: 781 RNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYF 840
R IFLSA T HPSTTN+ S APS GL T+E++IKQDAS + N+TYF
Sbjct: 781 RYIFLSAKCASNDANITTNGKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYF 840
Query: 841 NSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP 900
+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ SAGKEF ANAE+
Sbjct: 841 SSISTPANSHYNMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGASAGKEFTANAEQTS 900
Query: 901 MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIG 960
++ S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T PATST
Sbjct: 901 ILMGSFMSHASSAMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAPATST-- 960
Query: 961 TSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQ 1020
+ +T T LGFES T ASFSSIC TTS+A A+ SS K VSSNSHP VA RVS+GNN
Sbjct: 961 --HFSTPRTHLGFESFTGASFSSICSTTSAA-AIACSSSKTVSSNSHPTVAFRVSTGNND 1020
Query: 1021 FEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SL 1059
E +G SKDN P+F QKP+PP SSG SF A S NP V K+Q + S
Sbjct: 1021 CEDQGTSKDNVPIFSQKPVPPPSSGFSFGQATSESNPFLVQKQQTLAKPQNSSPYIAHSS 1080
BLAST of Sed0011841 vs. ExPASy Swiss-Prot
Match:
Q9CAF4 (Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 2.7e-11
Identity = 270/1134 (23.81%), Postives = 416/1134 (36.68%), Query Frame = 0
Query: 19 LRTAGKFTDGRFLRKSPAKPYDRPPAPTGK----------NSWILKLVDPAQRLISSGSQ 78
L T GKF R+S PYDRP W+ KLVDPAQRLI+ +Q
Sbjct: 17 LGTGGKFRKPT-ARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKLVDPAQRLITYSAQ 76
Query: 79 MLSSSAFR-RLASRESSQSRKDDKKEDGTVPFEFQVEETNVVENWDKSE----------- 138
L S R RL S E+ + +K+ +P +ET V D S
Sbjct: 77 RLFGSLSRKRLGSGETPLQSPEQQKQ---LPERGVNQETKVGHKEDVSNLSMKNGLIRME 136
Query: 139 ---------QFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIP 198
+ G +LE+ ++ KTFTRS++ LT LL S+ D EE++ E +
Sbjct: 137 DTNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRNEVGMVVR 196
Query: 199 KSIRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQS 258
E D +M+ +STP + LDE I+SPA++A+AYM S+ +V PS+
Sbjct: 197 HPPSHERDRTHPDNGSMN-TLVSTPPGSLRTLDECIASPAQLAKAYMGSRPSEVTPSMLG 256
Query: 259 SRATRLGENSAGSNSQSFSSKSTDLLLV-------------------------------- 318
R E+S N F KS + LV
Sbjct: 257 LRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPLENGFVTPRSRGRSAVYSMARTPY 316
Query: 319 ------------------------PSTTTQ----GLKRRSSFSYSHIGSILPPRSIRQKR 378
PS + Q GLKRRSS + IGS+ P R IRQK
Sbjct: 317 SRPQSSVKIGSLFQASPSKWEESLPSGSRQGFQSGLKRRSSVLDNDIGSVGPVRRIRQKS 376
Query: 379 NIHLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRK 438
N+ S+ L+LP+S P SV +G S A+
Sbjct: 377 NLS-SRSLALPVSESPLSVRANGGEKTTHTSKDSAE------------------------ 436
Query: 439 SIMNVESNSITGAGSSSIYTPSYHVMASKILEQLTPSKKKVSALSQLPVGEKAPLKLSPF 498
I G+ + + T S MASKIL+QL K VS EK+P KLSP
Sbjct: 437 --------DIPGSSFNLVPTKSSE-MASKILQQL---DKLVS------TREKSPSKLSPS 496
Query: 499 TI-GEHQRNVKDVDLPSEEFVHEEKQSNGLHWIPYHDNQDDTFQ----NREKPENMKPLD 558
+ G +++++V+ P EK++N + D ++Q +RE
Sbjct: 497 MLRGPALKSLQNVEAPKFLGNLPEKKAN---------SPDSSYQKQEISRESVSREVLAQ 556
Query: 559 PHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS 618
+ + G + D + + S+ + P K +F+M +D L+ D+
Sbjct: 557 SEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFRMSAHEDFLELDDDL 616
Query: 619 DHIVPATAEVIESDNCLALRQI-----TANEALAPANSQTTSEVIVDSPLNRSSDSKTFD 678
EV E N + + + L P+ + ++ I + ++ + + + +
Sbjct: 617 G-AASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPSTSYISNGDASQGTSNGSLE 676
Query: 679 ERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSLGS-KDLPENK-----QNDSPDFSF 738
++ + S++A+ + I +S+ S K E K + P F
Sbjct: 677 TERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPTSEEKRIPLEEPKKPAAVF 736
Query: 739 EN-NISP-----------------RKHTSLTTFDDGNKDASPTESH-------------- 798
N + SP + TS T F A PTES
Sbjct: 737 PNISFSPPATGLLNQNSGASADIKLEKTSSTAFGVSEAWAKPTESKKTFSNSASGAESST 796
Query: 799 -----------------FAPKNCNGA-----PCPYTQSNPAS--SYSDVQESVYLNADIS 858
P NG+ P + SN S S D+ +V A
Sbjct: 797 SAAPTLNGSIFSAGANAVTPPPSNGSLTSSPSFPPSISNIPSDNSVGDMPSTVQSFAATH 856
Query: 859 SNHELDRSWGTCNDAFSFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLS 918
++ + T ND+ S +SA SST+ P+ S + S+ Q S +
Sbjct: 857 NSSSIFGKLPTSNDSNSQSTSASPLSSTSPFKFGQPAAPFSAPAVSESSGQISKETEVKN 916
Query: 919 ATTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASP-------NKENDTYFNSIT----T 963
AT N + + A +TG+V + + + P + + N T
Sbjct: 917 ATFGNTSTFKFGGMASADQSTGIVFGAKSAENKSRPGFVFGSSSVVGGSTLNPSTAAASA 976
BLAST of Sed0011841 vs. ExPASy TrEMBL
Match:
A0A6J1GWT8 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458242 PE=4 SV=1)
HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 695/1111 (62.56%), Postives = 792/1111 (71.29%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
MATAR + + EEE LRTAGKF D RF RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MATAR----ERKSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFR--------RLASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR R +S ESSQSR+DDKK D T PFE QV NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSRTSSPESSQSRRDDKKADVTDPFEVQVAAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++PNSEV M RQS TPIL+SSVLDEDISSPAEIARAYM S+ K+CPS+ S R
Sbjct: 181 NRNEFKKIPNSEVRMCRQSFPTPILSSSVLDEDISSPAEIARAYMGSRQPKICPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSA S SFSSKSTD+LLVPS+T QGLKRRSSF +HIG +P R I QK NI
Sbjct: 241 AQGLGENSARPTSTSFSSKSTDMLLVPSSTNQGLKRRSSFFDNHIGPNVPLRRIGQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
HLSKG SLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK + RK I
Sbjct: 301 HLSKGSSLPVSTRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSTRKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES++I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDNIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-D 540
HRCALLK+SGSIG + DS +L VPA AVVKSIIQPP NK AFQM PDKD +D DESS D
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMWPDKDRVDQDESSPD 540
Query: 541 HIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED 600
+ PATAE E D LA+RQ TANE LAP+ QT SEVIV SPLNRSSD KT + + +D
Sbjct: 541 RVAPATAEDREGDISLAVRQTTANETLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDD 600
Query: 601 MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HT 660
M T FT Q A SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK +
Sbjct: 601 MDTSFTFQIA-----PSQPETIDSAPTNSFGNNDLPEKKRIDSPVFSFGNNVSPRKQPNA 660
Query: 661 SLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELD 720
S T FD GNKDAS TE AP+N NGAP PYTQ NPASSYSDVQ SVYLNA SSNH+LD
Sbjct: 661 SSTAFDVGNKDASRTELCAAPENGNGAPFPYTQWNPASSYSDVQGSVYLNAVASSNHKLD 720
Query: 721 RSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSS 780
SWGTCNDAF SF S+AR QS NG SISCPS +SS S QSSS
Sbjct: 721 CSWGTCNDAFSSSASISAGLAVSFCSTARYQSLNNGLSISCPSQYSSCSLLTPSMGQSSS 780
Query: 781 RNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYF 840
R IFLSA T HPSTTN+ S APS GL T+E++IKQDAS + N+TYF
Sbjct: 781 RYIFLSAKCASNDANITTNGKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYF 840
Query: 841 NSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP 900
+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ SAGKEF ANAE+
Sbjct: 841 SSISTPANSHYNMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGASAGKEFTANAEQTS 900
Query: 901 MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIG 960
++ S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T PATST
Sbjct: 901 ILMGSFMSHASSAMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAPATST-- 960
Query: 961 TSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQ 1020
+ +T T LGFES T ASFSSIC TTS+A A+ SS K VSSNSHP VA RVS+GNN
Sbjct: 961 --HFSTPRTHLGFESFTGASFSSICSTTSAA-AIACSSSKTVSSNSHPTVAFRVSTGNND 1020
Query: 1021 FEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SL 1059
E +G SKDN P+F QKP+PP SSG SF A S NP V K+Q + S
Sbjct: 1021 CEDQGTSKDNVPIFSQKPVPPPSSGFSFGQATSESNPFLVQKQQTLAKPQNSSPYIAHSS 1080
BLAST of Sed0011841 vs. ExPASy TrEMBL
Match:
A0A6J1GZB0 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458242 PE=4 SV=1)
HSP 1 Score: 1094.0 bits (2828), Expect = 0.0e+00
Identity = 691/1111 (62.20%), Postives = 788/1111 (70.93%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
MATAR + + EEE LRTAGKF D RF RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MATAR----ERKSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFR--------RLASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR R +S ESSQSR+DDKK D T V NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSRTSSPESSQSRRDDKKADVT------VAAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++PNSEV M RQS TPIL+SSVLDEDISSPAEIARAYM S+ K+CPS+ S R
Sbjct: 181 NRNEFKKIPNSEVRMCRQSFPTPILSSSVLDEDISSPAEIARAYMGSRQPKICPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSA S SFSSKSTD+LLVPS+T QGLKRRSSF +HIG +P R I QK NI
Sbjct: 241 AQGLGENSARPTSTSFSSKSTDMLLVPSSTNQGLKRRSSFFDNHIGPNVPLRRIGQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
HLSKG SLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK + RK I
Sbjct: 301 HLSKGSSLPVSTRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSTRKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES++I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDNIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-D 540
HRCALLK+SGSIG + DS +L VPA AVVKSIIQPP NK AFQM PDKD +D DESS D
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMWPDKDRVDQDESSPD 540
Query: 541 HIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED 600
+ PATAE E D LA+RQ TANE LAP+ QT SEVIV SPLNRSSD KT + + +D
Sbjct: 541 RVAPATAEDREGDISLAVRQTTANETLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDD 600
Query: 601 MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HT 660
M T FT Q A SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK +
Sbjct: 601 MDTSFTFQIA-----PSQPETIDSAPTNSFGNNDLPEKKRIDSPVFSFGNNVSPRKQPNA 660
Query: 661 SLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELD 720
S T FD GNKDAS TE AP+N NGAP PYTQ NPASSYSDVQ SVYLNA SSNH+LD
Sbjct: 661 SSTAFDVGNKDASRTELCAAPENGNGAPFPYTQWNPASSYSDVQGSVYLNAVASSNHKLD 720
Query: 721 RSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSS 780
SWGTCNDAF SF S+AR QS NG SISCPS +SS S QSSS
Sbjct: 721 CSWGTCNDAFSSSASISAGLAVSFCSTARYQSLNNGLSISCPSQYSSCSLLTPSMGQSSS 780
Query: 781 RNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYF 840
R IFLSA T HPSTTN+ S APS GL T+E++IKQDAS + N+TYF
Sbjct: 781 RYIFLSAKCASNDANITTNGKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYF 840
Query: 841 NSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP 900
+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ SAGKEF ANAE+
Sbjct: 841 SSISTPANSHYNMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGASAGKEFTANAEQTS 900
Query: 901 MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIG 960
++ S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T PATST
Sbjct: 901 ILMGSFMSHASSAMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAPATST-- 960
Query: 961 TSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQ 1020
+ +T T LGFES T ASFSSIC TTS+A A+ SS K VSSNSHP VA RVS+GNN
Sbjct: 961 --HFSTPRTHLGFESFTGASFSSICSTTSAA-AIACSSSKTVSSNSHPTVAFRVSTGNND 1020
Query: 1021 FEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SL 1059
E +G SKDN P+F QKP+PP SSG SF A S NP V K+Q + S
Sbjct: 1021 CEDQGTSKDNVPIFSQKPVPPPSSGFSFGQATSESNPFLVQKQQTLAKPQNSSPYIAHSS 1080
BLAST of Sed0011841 vs. ExPASy TrEMBL
Match:
A0A6J1K2T4 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490466 PE=4 SV=1)
HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 687/1111 (61.84%), Postives = 787/1111 (70.84%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
MATAR+Q + EEE LRTAGKF D +F RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MATAREQ----KSGEEEGLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFRR--------LASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR ++S ES QSR+DDKK D T PFE QV NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSCISSPESIQSRRDDKKADVTDPFEVQVAAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++ NSEV M RQS TP L+SSVLDEDISSPAEIARAYM S+ K+CPS+ S R
Sbjct: 181 NRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSAG S SFSSKS D+LLVPS+T+QGLKRRSSF +HIG +P R IRQK NI
Sbjct: 241 AQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQGLKRRSSFFDNHIGPNVPLRRIRQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
HLSKGLSLP+S+RP S PVD LSFDASQSSKF KV +F S I N QL LKPK + RK I
Sbjct: 301 HLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSARKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES+ I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-D 540
HRCALLK+SGSIG + DS +L VPA AVVKS IQPP NK AF M PDKD +DHDESS D
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSTIQPPKNKLAFLMWPDKDRVDHDESSPD 540
Query: 541 HIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED 600
+ PATAE E D LA+RQ TA+E+LAP+ QT SEVIV SPLNRSSD KT + + +D
Sbjct: 541 RVAPATAEDREGDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDD 600
Query: 601 MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HT 660
M T FT Q A SQPETIDSAPTNS G+ DLPENK+ DSP FSF NN+SPRK +
Sbjct: 601 MDTSFTFQIA-----PSQPETIDSAPTNSFGNNDLPENKRIDSPVFSFGNNVSPRKQPNA 660
Query: 661 SLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELD 720
S T FD GNKDAS TE A +N NGA PYTQ NPASS SDVQ SVYLNA SSNH+LD
Sbjct: 661 SSTAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVYLNAVASSNHKLD 720
Query: 721 RSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSS 780
SWGTCNDAF SF +AR QS NG SISCPS +SS S QSSS
Sbjct: 721 CSWGTCNDAFSSSASISAGLAVSFCPTARYQSLNNGLSISCPSQYSSCSPLTPSMGQSSS 780
Query: 781 RNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYF 840
R IFLSA T D HPSTTN+ S APS GL T+E++IKQDAS + N+TYF
Sbjct: 781 RYIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYF 840
Query: 841 NSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP 900
+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+
Sbjct: 841 SSISTPANSHYNMFSFNPGATPSFVNNHQLRTPTVSSAPELSAQGVSAGKEFTANAEQTS 900
Query: 901 MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIG 960
++ S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T ATST
Sbjct: 901 IIMGSFMSHASSVMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAQATST-- 960
Query: 961 TSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQ 1020
+ +T T LGFES T ASFSSIC TTS+A A+ GSS K VSSNSH VA RVS+GN
Sbjct: 961 --HFSTPRTHLGFESFTGASFSSICSTTSAA-AMAGSSSKTVSSNSHHTVAFRVSTGNKD 1020
Query: 1021 FEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SL 1059
E +G KDN PLF QKP+PP SSG SF A NP VGK+Q + S
Sbjct: 1021 CEDQGTYKDNVPLFSQKPVPPPSSGFSFSQATPESNPFLVGKQQTLAEPQNSSPYIAHSS 1080
BLAST of Sed0011841 vs. ExPASy TrEMBL
Match:
A0A6J1KBI9 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490466 PE=4 SV=1)
HSP 1 Score: 1074.3 bits (2777), Expect = 4.0e-310
Identity = 683/1111 (61.48%), Postives = 783/1111 (70.48%), Query Frame = 0
Query: 1 MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVD 60
MATAR+Q + EEE LRTAGKF D +F RK P KPYDRPP +G NSWILKLVD
Sbjct: 1 MATAREQ----KSGEEEGLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSGNNSWILKLVD 60
Query: 61 PAQRLISSGSQMLSSSAFRR--------LASRESSQSRKDDKKEDGTVPFEFQVEETNVV 120
PAQRLISSGSQML SS FR ++S ES QSR+DDKK D T V NV
Sbjct: 61 PAQRLISSGSQMLFSSVFRNFPHRLPSCISSPESIQSRRDDKKADVT------VTAANVG 120
Query: 121 ENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKS 180
+N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S
Sbjct: 121 DNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
Query: 181 IRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSR 240
R EF ++ NSEV M RQS TP L+SSVLDEDISSPAEIARAYM S+ K+CPS+ S R
Sbjct: 181 NRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMPSLR 240
Query: 241 ATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI 300
A LGENSAG S SFSSKS D+LLVPS+T+QGLKRRSSF +HIG +P R IRQK NI
Sbjct: 241 AQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQGLKRRSSFFDNHIGPNVPLRRIRQKPNI 300
Query: 301 HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSI 360
HLSKGLSLP+S+RP S PVD LSFDASQSSKF KV +F S I N QL LKPK + RK I
Sbjct: 301 HLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSARKFI 360
Query: 361 MNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLS 420
MNVES+ I GAGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLS
Sbjct: 361 MNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLS 420
Query: 421 PFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPH 480
PFT+ H + VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPH
Sbjct: 421 PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
Query: 481 HRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-D 540
HRCALLK+SGSIG + DS +L VPA AVVKS IQPP NK AF M PDKD +DHDESS D
Sbjct: 481 HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSTIQPPKNKLAFLMWPDKDRVDHDESSPD 540
Query: 541 HIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED 600
+ PATAE E D LA+RQ TA+E+LAP+ QT SEVIV SPLNRSSD KT + + +D
Sbjct: 541 RVAPATAEDREGDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDD 600
Query: 601 MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HT 660
M T FT Q A SQPETIDSAPTNS G+ DLPENK+ DSP FSF NN+SPRK +
Sbjct: 601 MDTSFTFQIA-----PSQPETIDSAPTNSFGNNDLPENKRIDSPVFSFGNNVSPRKQPNA 660
Query: 661 SLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELD 720
S T FD GNKDAS TE A +N NGA PYTQ NPASS SDVQ SVYLNA SSNH+LD
Sbjct: 661 SSTAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVYLNAVASSNHKLD 720
Query: 721 RSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSS 780
SWGTCNDAF SF +AR QS NG SISCPS +SS S QSSS
Sbjct: 721 CSWGTCNDAFSSSASISAGLAVSFCPTARYQSLNNGLSISCPSQYSSCSPLTPSMGQSSS 780
Query: 781 RNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYF 840
R IFLSA T D HPSTTN+ S APS GL T+E++IKQDAS + N+TYF
Sbjct: 781 RYIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYF 840
Query: 841 NSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP 900
+SI+TP S+ +M SF ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+
Sbjct: 841 SSISTPANSHYNMFSFNPGATPSFVNNHQLRTPTVSSAPELSAQGVSAGKEFTANAEQTS 900
Query: 901 MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIG 960
++ S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T ATST
Sbjct: 901 IIMGSFMSHASSVMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAQATST-- 960
Query: 961 TSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQ 1020
+ +T T LGFES T ASFSSIC TTS+A A+ GSS K VSSNSH VA RVS+GN
Sbjct: 961 --HFSTPRTHLGFESFTGASFSSICSTTSAA-AMAGSSSKTVSSNSHHTVAFRVSTGNKD 1020
Query: 1021 FEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SL 1059
E +G KDN PLF QKP+PP SSG SF A NP VGK+Q + S
Sbjct: 1021 CEDQGTYKDNVPLFSQKPVPPPSSGFSFSQATPESNPFLVGKQQTLAEPQNSSPYIAHSS 1080
BLAST of Sed0011841 vs. ExPASy TrEMBL
Match:
A0A6J1KDW6 (nuclear pore complex protein NUP1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111490466 PE=4 SV=1)
HSP 1 Score: 969.1 bits (2504), Expect = 1.5e-278
Identity = 611/981 (62.28%), Postives = 698/981 (71.15%), Query Frame = 0
Query: 120 MMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPN 179
M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP EEK+ +FISSIP+S R EF ++ N
Sbjct: 1 MVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPESNRNEFKKISN 60
Query: 180 SEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAG 239
SEV M RQS TP L+SSVLDEDISSPAEIARAYM S+ K+CPS+ S RA LGENSAG
Sbjct: 61 SEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMPSLRAQGLGENSAG 120
Query: 240 SNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNIHLSKGLSLPI 299
S SFSSKS D+LLVPS+T+QGLKRRSSF +HIG +P R IRQK NIHLSKGLSLP+
Sbjct: 121 PTSTSFSSKSIDMLLVPSSTSQGLKRRSSFFDNHIGPNVPLRRIRQKPNIHLSKGLSLPV 180
Query: 300 SSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITG 359
S+RP S PVD LSFDASQSSKF KV +F S I N QL LKPK + RK IMNVES+ I G
Sbjct: 181 STRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSARKFIMNVESDDIRG 240
Query: 360 AGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLSPFTIGEHQRN 419
AGSSSIYTPS + MASKILEQ LTP K+KV +LPVGE +P KLSPFT+ H +
Sbjct: 241 AGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLSPFTVDGHLKI 300
Query: 420 VKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSG 479
VKDVDLP EE VH+ KQS LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SG
Sbjct: 301 VKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPHHRCALLKDSG 360
Query: 480 SIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVI 539
SIG + DS +L VPA AVVKS IQPP NK AF M PDKD +DHDESS D + PATAE
Sbjct: 361 SIGSSKDSMIDLGVPAPAVVKSTIQPPKNKLAFLMWPDKDRVDHDESSPDRVAPATAEDR 420
Query: 540 ESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDEDMVTRFTLQNA 599
E D LA+RQ TA+E+LAP+ QT SEVIV SPLNRSSD KT + + +DM T FT Q A
Sbjct: 421 EGDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDDMDTSFTFQIA 480
Query: 600 SSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNK 659
SQPETIDSAPTNS G+ DLPENK+ DSP FSF NN+SPRK + S T FD GNK
Sbjct: 481 -----PSQPETIDSAPTNSFGNNDLPENKRIDSPVFSFGNNVSPRKQPNASSTAFDFGNK 540
Query: 660 DASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELDRSWGTCNDAF 719
DAS TE A +N NGA PYTQ NPASS SDVQ SVYLNA SSNH+LD SWGTCNDAF
Sbjct: 541 DASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVYLNAVASSNHKLDCSWGTCNDAF 600
Query: 720 ------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA--- 779
SF +AR QS NG SISCPS +SS S QSSSR IFLSA
Sbjct: 601 SSSASISAGLAVSFCPTARYQSLNNGLSISCPSQYSSCSPLTPSMGQSSSRYIFLSAKCA 660
Query: 780 -------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISN 839
T D HPSTTN+ S APS GL T+E++IKQDAS + N+TYF+SI+TP S+
Sbjct: 661 SNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYFSSISTPANSH 720
Query: 840 NSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAPMVSPSSMLNA 899
+M SF ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+ ++ S M +A
Sbjct: 721 YNMFSFNPGATPSFVNNHQLRTPTVSSAPELSAQGVSAGKEFTANAEQTSIIMGSFMSHA 780
Query: 900 SSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTR 959
SS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T ATST + +T T
Sbjct: 781 SSVMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAQATST----HFSTPRTH 840
Query: 960 LGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQFEARGISKDN 1019
LGFES T ASFSSIC TTS+A A+ GSS K VSSNSH VA RVS+GN E +G KDN
Sbjct: 841 LGFESFTGASFSSICSTTSAA-AMAGSSSKTVSSNSHHTVAFRVSTGNKDCEDQGTYKDN 900
Query: 1020 APLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTL 1059
PLF QKP+PP SSG SF A NP VGK+Q + S +ARGSF L
Sbjct: 901 VPLFSQKPVPPPSSGFSFSQATPESNPFLVGKQQTLAEPQNSSPYIAHSSSLEARGSFPL 960
BLAST of Sed0011841 vs. TAIR 10
Match:
AT3G10650.1 (BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). )
HSP 1 Score: 72.8 bits (177), Expect = 1.9e-12
Identity = 270/1134 (23.81%), Postives = 416/1134 (36.68%), Query Frame = 0
Query: 19 LRTAGKFTDGRFLRKSPAKPYDRPPAPTGK----------NSWILKLVDPAQRLISSGSQ 78
L T GKF R+S PYDRP W+ KLVDPAQRLI+ +Q
Sbjct: 17 LGTGGKFRKPT-ARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKLVDPAQRLITYSAQ 76
Query: 79 MLSSSAFR-RLASRESSQSRKDDKKEDGTVPFEFQVEETNVVENWDKSE----------- 138
L S R RL S E+ + +K+ +P +ET V D S
Sbjct: 77 RLFGSLSRKRLGSGETPLQSPEQQKQ---LPERGVNQETKVGHKEDVSNLSMKNGLIRME 136
Query: 139 ---------QFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIP 198
+ G +LE+ ++ KTFTRS++ LT LL S+ D EE++ E +
Sbjct: 137 DTNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRNEVGMVVR 196
Query: 199 KSIRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQS 258
E D +M+ +STP + LDE I+SPA++A+AYM S+ +V PS+
Sbjct: 197 HPPSHERDRTHPDNGSMN-TLVSTPPGSLRTLDECIASPAQLAKAYMGSRPSEVTPSMLG 256
Query: 259 SRATRLGENSAGSNSQSFSSKSTDLLLV-------------------------------- 318
R E+S N F KS + LV
Sbjct: 257 LRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPLENGFVTPRSRGRSAVYSMARTPY 316
Query: 319 ------------------------PSTTTQ----GLKRRSSFSYSHIGSILPPRSIRQKR 378
PS + Q GLKRRSS + IGS+ P R IRQK
Sbjct: 317 SRPQSSVKIGSLFQASPSKWEESLPSGSRQGFQSGLKRRSSVLDNDIGSVGPVRRIRQKS 376
Query: 379 NIHLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRK 438
N+ S+ L+LP+S P SV +G S A+
Sbjct: 377 NLS-SRSLALPVSESPLSVRANGGEKTTHTSKDSAE------------------------ 436
Query: 439 SIMNVESNSITGAGSSSIYTPSYHVMASKILEQLTPSKKKVSALSQLPVGEKAPLKLSPF 498
I G+ + + T S MASKIL+QL K VS EK+P KLSP
Sbjct: 437 --------DIPGSSFNLVPTKSSE-MASKILQQL---DKLVS------TREKSPSKLSPS 496
Query: 499 TI-GEHQRNVKDVDLPSEEFVHEEKQSNGLHWIPYHDNQDDTFQ----NREKPENMKPLD 558
+ G +++++V+ P EK++N + D ++Q +RE
Sbjct: 497 MLRGPALKSLQNVEAPKFLGNLPEKKAN---------SPDSSYQKQEISRESVSREVLAQ 556
Query: 559 PHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS 618
+ + G + D + + S+ + P K +F+M +D L+ D+
Sbjct: 557 SEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFRMSAHEDFLELDDDL 616
Query: 619 DHIVPATAEVIESDNCLALRQI-----TANEALAPANSQTTSEVIVDSPLNRSSDSKTFD 678
EV E N + + + L P+ + ++ I + ++ + + + +
Sbjct: 617 G-AASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPSTSYISNGDASQGTSNGSLE 676
Query: 679 ERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSLGS-KDLPENK-----QNDSPDFSF 738
++ + S++A+ + I +S+ S K E K + P F
Sbjct: 677 TERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPTSEEKRIPLEEPKKPAAVF 736
Query: 739 EN-NISP-----------------RKHTSLTTFDDGNKDASPTESH-------------- 798
N + SP + TS T F A PTES
Sbjct: 737 PNISFSPPATGLLNQNSGASADIKLEKTSSTAFGVSEAWAKPTESKKTFSNSASGAESST 796
Query: 799 -----------------FAPKNCNGA-----PCPYTQSNPAS--SYSDVQESVYLNADIS 858
P NG+ P + SN S S D+ +V A
Sbjct: 797 SAAPTLNGSIFSAGANAVTPPPSNGSLTSSPSFPPSISNIPSDNSVGDMPSTVQSFAATH 856
Query: 859 SNHELDRSWGTCNDAFSFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLS 918
++ + T ND+ S +SA SST+ P+ S + S+ Q S +
Sbjct: 857 NSSSIFGKLPTSNDSNSQSTSASPLSSTSPFKFGQPAAPFSAPAVSESSGQISKETEVKN 916
Query: 919 ATTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASP-------NKENDTYFNSIT----T 963
AT N + + A +TG+V + + + P + + N T
Sbjct: 917 ATFGNTSTFKFGGMASADQSTGIVFGAKSAENKSRPGFVFGSSSVVGGSTLNPSTAAASA 976
BLAST of Sed0011841 vs. TAIR 10
Match:
AT5G20200.1 (nucleoporin-related )
HSP 1 Score: 51.2 bits (121), Expect = 5.9e-06
Identity = 60/231 (25.97%), Postives = 101/231 (43.72%), Query Frame = 0
Query: 32 RKSPAKPYDRPPA-PTGKNSWILKLVDPAQRLISSGSQMLSSSAFRRLASRESSQSRKDD 91
R+ A PY RP + WI ++VDPA R+IS G+ + F AS + + +D
Sbjct: 34 RRHAATPYSRPTQNQVQRRPWISRIVDPAYRIISGGATRILPYFFSNAASAPALAAPPED 93
Query: 92 KKE------------DGTV--------PFEFQVEETNVVENWDK---------------S 151
+ + D +V P +V + N ++ +
Sbjct: 94 QNQHQGELQNNPQDNDPSVTPISNKPEPASIEVGGPSGTANVNEGNFSISAQRRGKAALN 153
Query: 152 EQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLP-VEIEEKKFEF-ISSIPKSIRKE 211
+ + ELER M+ KTF++++I L ++ SR +DLP V+ +E+ E + K
Sbjct: 154 DDVAISELERLMEGKTFSQAEIDRLIEMISSRAIDLPDVKRDERNLEIPLREGAKKNMSL 213
Query: 212 FDE----VPNSEVTMDRQSISTPILTSSVLDEDI------SSPAEIARAYM 215
FD+ + + + + TP+ S +LD D SPAE+A+AYM
Sbjct: 214 FDKAKEPIGGKDANSEIWATPTPLAKSIILDGDKIRDEVGLSPAELAKAYM 264
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023528132.1 | 0.0e+00 | 62.47 | nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo] >... | [more] |
KAG7032030.1 | 0.0e+00 | 62.59 | Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022956526.1 | 0.0e+00 | 62.56 | nuclear pore complex protein NUP1-like isoform X1 [Cucurbita moschata] >XP_02295... | [more] |
XP_023528157.1 | 0.0e+00 | 62.11 | nuclear pore complex protein NUP1-like isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
XP_022956529.1 | 0.0e+00 | 62.20 | nuclear pore complex protein NUP1-like isoform X2 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q9CAF4 | 2.7e-11 | 23.81 | Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GWT8 | 0.0e+00 | 62.56 | nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1GZB0 | 0.0e+00 | 62.20 | nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1K2T4 | 0.0e+00 | 61.84 | nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A6J1KBI9 | 4.0e-310 | 61.48 | nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A6J1KDW6 | 1.5e-278 | 62.28 | nuclear pore complex protein NUP1-like isoform X3 OS=Cucurbita maxima OX=3661 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT3G10650.1 | 1.9e-12 | 23.81 | BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.... | [more] |
AT5G20200.1 | 5.9e-06 | 25.97 | nucleoporin-related | [more] |