Homology
BLAST of Sed0011836 vs. NCBI nr
Match:
XP_023529316.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 943.7 bits (2438), Expect = 7.4e-271
Identity = 466/564 (82.62%), Postives = 503/564 (89.18%), Query Frame = 0
Query: 1 MSKSVHTQVMDLPSLSNNGTIFPDCIDS------------FFLMKVIDDSVSRNGFESIA 60
+S+ VHT+VM+LPS PDC+D+ +FLMK+I+DSVS NGFESIA
Sbjct: 38 ISRFVHTRVMNLPSQGGIERKIPDCLDARRKEGNDMRSDGYFLMKLIEDSVSNNGFESIA 97
Query: 61 PIFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHL 120
IFSKFR SI++Q+CNSMIRGYLDLN+H NSL+IFAHM KFSILPDS TFP VLKATA L
Sbjct: 98 LIFSKFRGSINSQICNSMIRGYLDLNEHLNSLIIFAHMHKFSILPDSSTFPAVLKATAQL 157
Query: 121 CDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALI 180
CD +LGKMIHG+V+Q+GFIRDVYTSTALVHMYC+CLSISDASQLFDEMPERNSVTWNALI
Sbjct: 158 CDIKLGKMIHGAVVQMGFIRDVYTSTALVHMYCSCLSISDASQLFDEMPERNSVTWNALI 217
Query: 181 TGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLR 240
TGYTHN+KF EAI+AFRGML GAEPSERTVVVVLSACSHLG+LNQGKWIH+FIYQN+LR
Sbjct: 218 TGYTHNRKFKEAINAFRGMLAAGAEPSERTVVVVLSACSHLGALNQGKWIHDFIYQNKLR 277
Query: 241 LNVFVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRM 300
LNVFVGT LIDMYAKCGVVEEAEKVFEEIR+KNVYTWNVLISGY MNG+GDAALQAFSRM
Sbjct: 278 LNVFVGTALIDMYAKCGVVEEAEKVFEEIRDKNVYTWNVLISGYGMNGQGDAALQAFSRM 337
Query: 301 VMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGL 360
+MENFKPD VTFLG+LCACCHQGLVTEGR+QF+SMKQQFGLQPKIEHYGCMVDLLGRAGL
Sbjct: 338 LMENFKPDAVTFLGLLCACCHQGLVTEGRRQFISMKQQFGLQPKIEHYGCMVDLLGRAGL 397
Query: 361 LEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNL 420
LEEALELI+SMSM+PDPIIWRALLCACRVHG+TKLGEYTI+RLIELEPNNGEN+VLLSNL
Sbjct: 398 LEEALELIESMSMEPDPIIWRALLCACRVHGNTKLGEYTIRRLIELEPNNGENYVLLSNL 457
Query: 421 YSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC------ 480
YSRE RWIEVGKLRGMMSLRGI KVPGCSSIEINN+V EF ASNDRK EF AI
Sbjct: 458 YSRERRWIEVGKLRGMMSLRGIEKVPGCSSIEINNSVHEFTASNDRKLEFNAIYKQLDNV 517
Query: 481 ------------TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC 535
TDM+LFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC
Sbjct: 518 MKKLKENGYVTGTDMSLFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC 577
BLAST of Sed0011836 vs. NCBI nr
Match:
XP_038878567.1 (pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida])
HSP 1 Score: 940.6 bits (2430), Expect = 6.3e-270
Identity = 463/564 (82.09%), Postives = 497/564 (88.12%), Query Frame = 0
Query: 1 MSKSVHTQVMDLPSLSNNGTIFPDCIDS------------FFLMKVIDDSVSRNGFESIA 60
MSK VHTQ MDLP N PD D+ +FLMK+IDDSVS NGFESIA
Sbjct: 36 MSKFVHTQAMDLPPPRTNERKIPDYKDALHKEGNDVRRDGYFLMKLIDDSVSHNGFESIA 95
Query: 61 PIFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHL 120
IFSKFRSSI++Q+CNSMIRGYLDLNKH NSL IFAHM KFSILPDS TFP VLKATA L
Sbjct: 96 LIFSKFRSSINSQLCNSMIRGYLDLNKHLNSLYIFAHMHKFSILPDSSTFPAVLKATAQL 155
Query: 121 CDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALI 180
CD ++GKMIHG+VIQ+GFI DVYTSTALVHMYC CLSISDAS++FDEMPERN+VTWNALI
Sbjct: 156 CDTEVGKMIHGTVIQMGFIHDVYTSTALVHMYCACLSISDASRVFDEMPERNAVTWNALI 215
Query: 181 TGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLR 240
TGYTHN+KFMEAI+AFRGML GAEPSERT+VVVLSACSHLG+LNQGKW+HEFIY NRLR
Sbjct: 216 TGYTHNRKFMEAINAFRGMLAAGAEPSERTMVVVLSACSHLGALNQGKWVHEFIYHNRLR 275
Query: 241 LNVFVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRM 300
LNVFVGT LIDMYAKCG V+EAEKVFEEIREKNVYTWNVLISGYAMNG+GDAAL AFSRM
Sbjct: 276 LNVFVGTALIDMYAKCGAVDEAEKVFEEIREKNVYTWNVLISGYAMNGQGDAALAAFSRM 335
Query: 301 VMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGL 360
+MENFKPD+VTFLG+LCACCHQGLVTEGR+QFMSMKQ FGLQPKIEHYGCMVDLLGRAG
Sbjct: 336 LMENFKPDEVTFLGILCACCHQGLVTEGRRQFMSMKQHFGLQPKIEHYGCMVDLLGRAGF 395
Query: 361 LEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNL 420
L+EALELIQSMSM+PDPIIWRALLCACRVHG+TKLGEYTI+RLIELEPNNGEN+VLLSNL
Sbjct: 396 LDEALELIQSMSMEPDPIIWRALLCACRVHGNTKLGEYTIRRLIELEPNNGENYVLLSNL 455
Query: 421 YSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC------ 480
YSRE RW EVGKLRGMMSLRGIGKVPGCSSIEINN V+EFAASNDRKPEF+AI
Sbjct: 456 YSREQRWAEVGKLRGMMSLRGIGKVPGCSSIEINNVVYEFAASNDRKPEFEAIYKQLDNL 515
Query: 481 ------------TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC 535
TDMAL+DIEKEEKEHSVMYHSEKLALAFGLLNSPL CTLRIVKNLRIC
Sbjct: 516 SEKLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLGCTLRIVKNLRIC 575
BLAST of Sed0011836 vs. NCBI nr
Match:
XP_022925029.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata])
HSP 1 Score: 938.3 bits (2424), Expect = 3.1e-269
Identity = 463/564 (82.09%), Postives = 501/564 (88.83%), Query Frame = 0
Query: 1 MSKSVHTQVMDLPSLSNNGTIFPDCIDS------------FFLMKVIDDSVSRNGFESIA 60
+S+ VHT+VM+LPS PDC+D+ +FLMK+I+DSVS NGFESIA
Sbjct: 38 ISRFVHTRVMNLPSQGGIERKIPDCLDARRKEGNDMRSDGYFLMKLIEDSVSNNGFESIA 97
Query: 61 PIFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHL 120
IFSKFR SI++Q+CNSMIRGYLD N+H NSL+IFAHM KFSILPDS TFP VLKATA L
Sbjct: 98 LIFSKFRGSINSQICNSMIRGYLDSNEHLNSLIIFAHMHKFSILPDSSTFPAVLKATAQL 157
Query: 121 CDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALI 180
CD +LGKMIHG+V+Q+GFIRDVYTSTALVHMYC+CLSISDASQLFDEMPERNSVTWNALI
Sbjct: 158 CDIKLGKMIHGAVVQMGFIRDVYTSTALVHMYCSCLSISDASQLFDEMPERNSVTWNALI 217
Query: 181 TGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLR 240
TGYTHN+KF EAI+AFRGML GAEPSERTVVVVLSACSHLG+LNQGKWIH+FIYQN+LR
Sbjct: 218 TGYTHNRKFREAINAFRGMLAAGAEPSERTVVVVLSACSHLGALNQGKWIHDFIYQNKLR 277
Query: 241 LNVFVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRM 300
LNVFVGT LIDMYAKCGVVEEAEKVFEEIR++NVYTWNVLISGY MNG+G+AALQ FSRM
Sbjct: 278 LNVFVGTALIDMYAKCGVVEEAEKVFEEIRDRNVYTWNVLISGYGMNGQGNAALQVFSRM 337
Query: 301 VMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGL 360
+MENFKPD VTFLG+LCACCHQGLVTEGR+QF+SMKQQFGLQPKIEHYGCMVDLLGRAGL
Sbjct: 338 LMENFKPDAVTFLGLLCACCHQGLVTEGRRQFISMKQQFGLQPKIEHYGCMVDLLGRAGL 397
Query: 361 LEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNL 420
LEEALELI+SMSM+PDPIIWRALLCACRVHG+TKLGEYTI+RLIELEPNNGEN+VLLSNL
Sbjct: 398 LEEALELIESMSMEPDPIIWRALLCACRVHGNTKLGEYTIRRLIELEPNNGENYVLLSNL 457
Query: 421 YSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC------ 480
YSRE RWIEVGKLRGMMSLRGI KVPGCSSIEINNAV EF ASNDRK EF AI
Sbjct: 458 YSRERRWIEVGKLRGMMSLRGIEKVPGCSSIEINNAVHEFTASNDRKREFSAIYKQLDNV 517
Query: 481 ------------TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC 535
TDM+LFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC
Sbjct: 518 MKKLKENGYVTGTDMSLFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC 577
BLAST of Sed0011836 vs. NCBI nr
Match:
XP_023003968.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima])
HSP 1 Score: 931.8 bits (2407), Expect = 2.9e-267
Identity = 459/555 (82.70%), Postives = 496/555 (89.37%), Query Frame = 0
Query: 10 MDLPSLSNNGTIFPDCIDS------------FFLMKVIDDSVSRNGFESIAPIFSKFRSS 69
M+LPS PDC+D+ +FLMK+I+DSVS NGFESIA IFSKFR S
Sbjct: 1 MNLPSQGGIERKIPDCLDALRKEGNDMRSDGYFLMKLIEDSVSNNGFESIALIFSKFRGS 60
Query: 70 IDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHLCDNQLGKMI 129
I++Q+CNSMIRGYLDLN+H NSL+IFAHM KFSILPDS TFP VLKATA LCD +LGKMI
Sbjct: 61 INSQICNSMIRGYLDLNEHLNSLIIFAHMHKFSILPDSSTFPAVLKATAQLCDIKLGKMI 120
Query: 130 HGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALITGYTHNKKF 189
HG+V+Q+GFIRDVYTSTALVHMYC+CLSISDASQLFDEMPERNSVTWNALITGYTHN+KF
Sbjct: 121 HGAVVQMGFIRDVYTSTALVHMYCSCLSISDASQLFDEMPERNSVTWNALITGYTHNRKF 180
Query: 190 MEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTL 249
EAI+AFRGML GAEPSERT+VVVLSACSHLG+LNQGKWIH+FIYQN+LRLNVFVGT L
Sbjct: 181 KEAINAFRGMLAAGAEPSERTMVVVLSACSHLGALNQGKWIHDFIYQNKLRLNVFVGTAL 240
Query: 250 IDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKPDK 309
IDMYAKCGVVEEAEKVFEEIR+KNVYTWNVLISGY MNG+G+AALQAFSRM+MENFKPD
Sbjct: 241 IDMYAKCGVVEEAEKVFEEIRDKNVYTWNVLISGYGMNGQGNAALQAFSRMLMENFKPDA 300
Query: 310 VTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQ 369
VTFLG+LCACCHQGLVTEGR+QF+SMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELI+
Sbjct: 301 VTFLGLLCACCHQGLVTEGRRQFISMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIE 360
Query: 370 SMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIE 429
SMSM+PDPIIWRALLCACRVHG+TK+GEYTI+RLIELEPNNGEN+VLLSNLYSRE RWIE
Sbjct: 361 SMSMEPDPIIWRALLCACRVHGNTKMGEYTIRRLIELEPNNGENYVLLSNLYSRERRWIE 420
Query: 430 VGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC--------------- 489
VGKLRGMMSLRGI KVPGCSSIEINNAV+EF ASNDRK EF AI
Sbjct: 421 VGKLRGMMSLRGIEKVPGCSSIEINNAVYEFTASNDRKLEFSAIYKQLDNVMKKLKENGY 480
Query: 490 ---TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV 535
TDM+LFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV
Sbjct: 481 VTGTDMSLFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV 540
BLAST of Sed0011836 vs. NCBI nr
Match:
XP_004138309.2 (pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus] >KGN63701.1 hypothetical protein Csa_014271 [Cucumis sativus])
HSP 1 Score: 927.9 bits (2397), Expect = 4.2e-266
Identity = 461/555 (83.06%), Postives = 490/555 (88.29%), Query Frame = 0
Query: 1 MSKSVHTQVMDLPSLSNNGTIFPDCID---SFFLMKVIDDSVSRNGFESIAPIFSKFRSS 60
M K VHTQ MDLP + NG+ PD D FLMK+IDDSVSRNGFESIA IFSK+R S
Sbjct: 37 MLKFVHTQAMDLPFQATNGSKIPDYNDVRRGHFLMKLIDDSVSRNGFESIARIFSKYRGS 96
Query: 61 IDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHLCDNQLGKMI 120
I++Q CNSMIR YLDLNKH NSL IFA M KFSILPDS TFP VLKATA LCD +GKMI
Sbjct: 97 INSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMI 156
Query: 121 HGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALITGYTHNKKF 180
HG VIQ+GFI DVYTSTALVH+YCTCLSISDASQLFDEMPERN+VTWNALITGYTHN+KF
Sbjct: 157 HGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKF 216
Query: 181 MEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTL 240
++AIDAFRGML GA+PSERTVVVVLSACSHLG+ NQGKWIHEFIY NRLRLNVFVGT L
Sbjct: 217 VKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTAL 276
Query: 241 IDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKPDK 300
IDMYAKCG V E EKVFEEIREKNVYTWNVLISGYAMNG+GDAALQAFSRM+MENFKPD+
Sbjct: 277 IDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDE 336
Query: 301 VTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQ 360
VTFLGVLCACCHQGLVTEGR QFMSMKQQFGLQP+IEHYGCMVDLLGRAGLLEEALELIQ
Sbjct: 337 VTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQ 396
Query: 361 SMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIE 420
SMS++PDPIIWRALLCACRVHG+TKLGEY IKRLIELEPNNGEN+VLLSN+YSRE RW E
Sbjct: 397 SMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAE 456
Query: 421 VGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC--------------- 480
VGKLRGMM+LRGI KVPGCSSIEINN V+EF ASNDRKPEF+AI
Sbjct: 457 VGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGY 516
Query: 481 ---TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV 535
TDMAL+DIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC DCHEFFKV
Sbjct: 517 VTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKV 576
BLAST of Sed0011836 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 414.5 bits (1064), Expect = 2.1e-114
Identity = 208/531 (39.17%), Postives = 328/531 (61.77%), Query Frame = 0
Query: 50 IFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSIL-PDSVTFPGVLKATAHL 109
+FSK I+ + N++IRGY ++ ++ ++ M ++ PD+ T+P ++KA +
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 110 CDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALI 169
D +LG+ IH VI+ GF +Y +L+H+Y C ++ A ++FD+MPE++ V WN++I
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 170 TGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLR 229
G+ N K EA+ + M G +P T+V +LSAC+ +G+L GK +H ++ + L
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 230 LNVFVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRM 289
N+ L+D+YA+CG VEEA+ +F+E+ +KN +W LI G A+NG G A++ F M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 290 -VMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAG 349
E P ++TF+G+L AC H G+V EG + F M++++ ++P+IEH+GCMVDLL RAG
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 350 LLEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSN 409
+++A E I+SM M+P+ +IWR LL AC VHGD+ L E+ ++++LEPN+ ++VLLSN
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 434
Query: 410 LYSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAICTDM-- 469
+Y+ E RW +V K+R M G+ KVPG S +E+ N V EF + P+ AI +
Sbjct: 435 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 494
Query: 470 ----------------ALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRI 529
D+E+EEKE++V+YHSEK+A+AF L+++P + +VKNLR+
Sbjct: 495 MTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRV 554
Query: 530 CSDCHEFFKVVSLVYKRYIVVRDRNPISSVVLAFLRWKSRKSSRAAAQQHW 561
C+DCH K+VS VY R IVVRDR+ R+ K+ + Q +W
Sbjct: 555 CADCHLAIKLVSKVYNREIVVRDRS----------RFHHFKNGSCSCQDYW 595
BLAST of Sed0011836 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 412.9 bits (1060), Expect = 6.0e-114
Identity = 212/521 (40.69%), Postives = 320/521 (61.42%), Query Frame = 0
Query: 34 VIDDSVSRNGFESIAPIFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILP 93
+I SR E+ +F + D N+MI GY + + +L +F M+K ++ P
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVK-DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 265
Query: 94 DSVTFPGVLKATAHLCDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLF 153
D T V+ A A +LG+ +H + GF ++ AL+ +Y C + A LF
Sbjct: 266 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 325
Query: 154 DEMPERNSVTWNALITGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLN 213
+ +P ++ ++WN LI GYTH + EA+ F+ MLR G P++ T++ +L AC+HLG+++
Sbjct: 326 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 385
Query: 214 QGKWIHEFIYQNRLR--LNV-FVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLIS 273
G+WIH +I RL+ N + T+LIDMYAKCG +E A +VF I K++ +WN +I
Sbjct: 386 IGRWIHVYI-DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 445
Query: 274 GYAMNGKGDAALQAFSRMVMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQ 333
G+AM+G+ DA+ FSRM +PD +TF+G+L AC H G++ GR F +M Q + +
Sbjct: 446 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 505
Query: 334 PKIEHYGCMVDLLGRAGLLEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKR 393
PK+EHYGCM+DLLG +GL +EA E+I M M+PD +IW +LL AC++HG+ +LGE +
Sbjct: 506 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 565
Query: 394 LIELEPNNGENFVLLSNLYSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAA 453
LI++EP N ++VLLSN+Y+ GRW EV K R +++ +G+ KVPGCSSIEI++ V EF
Sbjct: 566 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 625
Query: 454 SNDRKPEFKAIC------------------TDMALFDIEKEEKEHSVMYHSEKLALAFGL 513
+ P + I T L ++E+E KE ++ +HSEKLA+AFGL
Sbjct: 626 GDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 685
Query: 514 LNSPLDCTLRIVKNLRICSDCHEFFKVVSLVYKRYIVVRDR 534
+++ L IVKNLR+C +CHE K++S +YKR I+ RDR
Sbjct: 686 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDR 724
BLAST of Sed0011836 vs. ExPASy Swiss-Prot
Match:
Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 399.1 bits (1024), Expect = 8.9e-110
Identity = 206/496 (41.53%), Postives = 298/496 (60.08%), Query Frame = 0
Query: 56 SSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHLCDNQLGK 115
S D + NSM RGY +F +L+ ILPD+ TFP +LKA A + G+
Sbjct: 90 SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGR 149
Query: 116 MIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALITGYTHNK 175
+H ++LG +VY L++MY C + A +FD + E V +NA+ITGY
Sbjct: 150 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 209
Query: 176 KFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGT 235
+ EA+ FR M +P+E T++ VLS+C+ LGSL+ GKWIH++ ++ V V T
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 269
Query: 236 TLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKP 295
LIDM+AKCG +++A +FE++R K+ W+ +I YA +GK + ++ F RM EN +P
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
Query: 296 DKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALEL 355
D++TFLG+L AC H G V EGRK F M +FG+ P I+HYG MVDLL RAG LE+A E
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 356 IQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRW 415
I + + P P++WR LL AC H + L E +R+ EL+ ++G ++V+LSNLY+R +W
Sbjct: 390 IDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKW 449
Query: 416 IEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKP----------------EFK 475
V LR +M R KVPGCSSIE+NN V EF + + K +
Sbjct: 450 EYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLS 509
Query: 476 AICTDMALF---DIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEF 533
D ++ ++ +EKE ++ YHSEKLA+ FGLLN+P T+R+VKNLR+C DCH
Sbjct: 510 GYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 569
BLAST of Sed0011836 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 1.2e-106
Identity = 207/536 (38.62%), Postives = 307/536 (57.28%), Query Frame = 0
Query: 64 NSMIRGY--LDLNKHFNSLLIFAHMLKFSIL-PDSVTFPGVLKATAHLCDNQLGKMIHGS 123
N++IRG+ D +K ++ +F M+ + P+ TFP VLKA A Q GK IHG
Sbjct: 94 NTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 153
Query: 124 VIQLGFIRDVYTSTALVHMYCTCLSISD-------------------------------- 183
++ GF D + + LV MY C + D
Sbjct: 154 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNV 213
Query: 184 -------------ASQLFDEMPERNSVTWNALITGYTHNKKFMEAIDAFRGMLRVGAEPS 243
A LFD+M +R+ V+WN +I+GY+ N F +A++ FR M + P+
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 244 ERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTLIDMYAKCGVVEEAEKVFE 303
T+V VL A S LGSL G+W+H + + +R++ +G+ LIDMY+KCG++E+A VFE
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 304 EIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKPDKVTFLGVLCACCHQGLVTE 363
+ +NV TW+ +I+G+A++G+ A+ F +M +P V ++ +L AC H GLV E
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 364 GRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQSMSMKPDPIIWRALLCAC 423
GR+ F M GL+P+IEHYGCMVDLLGR+GLL+EA E I +M +KPD +IW+ALL AC
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453
Query: 424 RVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIEVGKLRGMMSLRGIGKVPG 483
R+ G+ ++G+ L+++ P++ +V LSN+Y+ +G W EV ++R M + I K PG
Sbjct: 454 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 513
Query: 484 CSSIEINNAVFEFAASNDRKPEFKAI------------------CTDMALFDIEKEEKEH 534
CS I+I+ + EF +D P+ K I T L ++E+E+KE+
Sbjct: 514 CSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKEN 573
BLAST of Sed0011836 vs. ExPASy Swiss-Prot
Match:
Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)
HSP 1 Score: 386.0 bits (990), Expect = 7.8e-106
Identity = 209/545 (38.35%), Postives = 308/545 (56.51%), Query Frame = 0
Query: 49 PIFSKFRSSIDTQMCNSMIRGY---LDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKAT 108
PIF +++ + N +IR + + + + ++ M + PD TFP +L +
Sbjct: 13 PIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSF 72
Query: 109 AHLCDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLS-------------------- 168
+ LG+ H ++ G +D + T+L++MY +C
Sbjct: 73 HNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWN 132
Query: 169 -----------ISDASQLFDEMPERNSVTWNALITGYTHNKKFMEAIDAFRGML-----R 228
I DA +LFDEMPERN ++W+ LI GY K+ EA+D FR M
Sbjct: 133 SVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNE 192
Query: 229 VGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTLIDMYAKCGVVEE 288
P+E T+ VLSAC LG+L QGKW+H +I + + +++ +GT LIDMYAKCG +E
Sbjct: 193 AFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLER 252
Query: 289 AEKVFEEI-REKNVYTWNVLISGYAMNGKGDAALQAFSRM-VMENFKPDKVTFLGVLCAC 348
A++VF + +K+V ++ +I AM G D Q FS M +N P+ VTF+G+L AC
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Query: 349 CHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQSMSMKPDPII 408
H+GL+ EG+ F M ++FG+ P I+HYGCMVDL GR+GL++EA I SM M+PD +I
Sbjct: 313 VHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 372
Query: 409 WRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIEVGKLRGMMSL 468
W +LL R+ GD K E +KRLIEL+P N +VLLSN+Y++ GRW+EV +R M +
Sbjct: 373 WGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEV 432
Query: 469 RGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC------------------TDMALFD 528
+GI KVPGCS +E+ V EF ++ + E + I T L D
Sbjct: 433 KGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLD 492
Query: 529 IEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKVVSLVYKRYIV 535
+ +++KE ++ YHSEKLA+AF L+ + +RI+KNLRIC DCH K++S ++ R IV
Sbjct: 493 LNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIV 552
BLAST of Sed0011836 vs. ExPASy TrEMBL
Match:
A0A6J1EAY2 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata OX=3662 GN=LOC111432395 PE=3 SV=1)
HSP 1 Score: 938.3 bits (2424), Expect = 1.5e-269
Identity = 463/564 (82.09%), Postives = 501/564 (88.83%), Query Frame = 0
Query: 1 MSKSVHTQVMDLPSLSNNGTIFPDCIDS------------FFLMKVIDDSVSRNGFESIA 60
+S+ VHT+VM+LPS PDC+D+ +FLMK+I+DSVS NGFESIA
Sbjct: 38 ISRFVHTRVMNLPSQGGIERKIPDCLDARRKEGNDMRSDGYFLMKLIEDSVSNNGFESIA 97
Query: 61 PIFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHL 120
IFSKFR SI++Q+CNSMIRGYLD N+H NSL+IFAHM KFSILPDS TFP VLKATA L
Sbjct: 98 LIFSKFRGSINSQICNSMIRGYLDSNEHLNSLIIFAHMHKFSILPDSSTFPAVLKATAQL 157
Query: 121 CDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALI 180
CD +LGKMIHG+V+Q+GFIRDVYTSTALVHMYC+CLSISDASQLFDEMPERNSVTWNALI
Sbjct: 158 CDIKLGKMIHGAVVQMGFIRDVYTSTALVHMYCSCLSISDASQLFDEMPERNSVTWNALI 217
Query: 181 TGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLR 240
TGYTHN+KF EAI+AFRGML GAEPSERTVVVVLSACSHLG+LNQGKWIH+FIYQN+LR
Sbjct: 218 TGYTHNRKFREAINAFRGMLAAGAEPSERTVVVVLSACSHLGALNQGKWIHDFIYQNKLR 277
Query: 241 LNVFVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRM 300
LNVFVGT LIDMYAKCGVVEEAEKVFEEIR++NVYTWNVLISGY MNG+G+AALQ FSRM
Sbjct: 278 LNVFVGTALIDMYAKCGVVEEAEKVFEEIRDRNVYTWNVLISGYGMNGQGNAALQVFSRM 337
Query: 301 VMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGL 360
+MENFKPD VTFLG+LCACCHQGLVTEGR+QF+SMKQQFGLQPKIEHYGCMVDLLGRAGL
Sbjct: 338 LMENFKPDAVTFLGLLCACCHQGLVTEGRRQFISMKQQFGLQPKIEHYGCMVDLLGRAGL 397
Query: 361 LEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNL 420
LEEALELI+SMSM+PDPIIWRALLCACRVHG+TKLGEYTI+RLIELEPNNGEN+VLLSNL
Sbjct: 398 LEEALELIESMSMEPDPIIWRALLCACRVHGNTKLGEYTIRRLIELEPNNGENYVLLSNL 457
Query: 421 YSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC------ 480
YSRE RWIEVGKLRGMMSLRGI KVPGCSSIEINNAV EF ASNDRK EF AI
Sbjct: 458 YSRERRWIEVGKLRGMMSLRGIEKVPGCSSIEINNAVHEFTASNDRKREFSAIYKQLDNV 517
Query: 481 ------------TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC 535
TDM+LFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC
Sbjct: 518 MKKLKENGYVTGTDMSLFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC 577
BLAST of Sed0011836 vs. ExPASy TrEMBL
Match:
A0A6J1KY52 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima OX=3661 GN=LOC111497411 PE=3 SV=1)
HSP 1 Score: 931.8 bits (2407), Expect = 1.4e-267
Identity = 459/555 (82.70%), Postives = 496/555 (89.37%), Query Frame = 0
Query: 10 MDLPSLSNNGTIFPDCIDS------------FFLMKVIDDSVSRNGFESIAPIFSKFRSS 69
M+LPS PDC+D+ +FLMK+I+DSVS NGFESIA IFSKFR S
Sbjct: 1 MNLPSQGGIERKIPDCLDALRKEGNDMRSDGYFLMKLIEDSVSNNGFESIALIFSKFRGS 60
Query: 70 IDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHLCDNQLGKMI 129
I++Q+CNSMIRGYLDLN+H NSL+IFAHM KFSILPDS TFP VLKATA LCD +LGKMI
Sbjct: 61 INSQICNSMIRGYLDLNEHLNSLIIFAHMHKFSILPDSSTFPAVLKATAQLCDIKLGKMI 120
Query: 130 HGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALITGYTHNKKF 189
HG+V+Q+GFIRDVYTSTALVHMYC+CLSISDASQLFDEMPERNSVTWNALITGYTHN+KF
Sbjct: 121 HGAVVQMGFIRDVYTSTALVHMYCSCLSISDASQLFDEMPERNSVTWNALITGYTHNRKF 180
Query: 190 MEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTL 249
EAI+AFRGML GAEPSERT+VVVLSACSHLG+LNQGKWIH+FIYQN+LRLNVFVGT L
Sbjct: 181 KEAINAFRGMLAAGAEPSERTMVVVLSACSHLGALNQGKWIHDFIYQNKLRLNVFVGTAL 240
Query: 250 IDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKPDK 309
IDMYAKCGVVEEAEKVFEEIR+KNVYTWNVLISGY MNG+G+AALQAFSRM+MENFKPD
Sbjct: 241 IDMYAKCGVVEEAEKVFEEIRDKNVYTWNVLISGYGMNGQGNAALQAFSRMLMENFKPDA 300
Query: 310 VTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQ 369
VTFLG+LCACCHQGLVTEGR+QF+SMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELI+
Sbjct: 301 VTFLGLLCACCHQGLVTEGRRQFISMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIE 360
Query: 370 SMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIE 429
SMSM+PDPIIWRALLCACRVHG+TK+GEYTI+RLIELEPNNGEN+VLLSNLYSRE RWIE
Sbjct: 361 SMSMEPDPIIWRALLCACRVHGNTKMGEYTIRRLIELEPNNGENYVLLSNLYSRERRWIE 420
Query: 430 VGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC--------------- 489
VGKLRGMMSLRGI KVPGCSSIEINNAV+EF ASNDRK EF AI
Sbjct: 421 VGKLRGMMSLRGIEKVPGCSSIEINNAVYEFTASNDRKLEFSAIYKQLDNVMKKLKENGY 480
Query: 490 ---TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV 535
TDM+LFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV
Sbjct: 481 VTGTDMSLFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV 540
BLAST of Sed0011836 vs. ExPASy TrEMBL
Match:
A0A0A0LUK8 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011530 PE=3 SV=1)
HSP 1 Score: 927.9 bits (2397), Expect = 2.0e-266
Identity = 461/555 (83.06%), Postives = 490/555 (88.29%), Query Frame = 0
Query: 1 MSKSVHTQVMDLPSLSNNGTIFPDCID---SFFLMKVIDDSVSRNGFESIAPIFSKFRSS 60
M K VHTQ MDLP + NG+ PD D FLMK+IDDSVSRNGFESIA IFSK+R S
Sbjct: 37 MLKFVHTQAMDLPFQATNGSKIPDYNDVRRGHFLMKLIDDSVSRNGFESIARIFSKYRGS 96
Query: 61 IDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHLCDNQLGKMI 120
I++Q CNSMIR YLDLNKH NSL IFA M KFSILPDS TFP VLKATA LCD +GKMI
Sbjct: 97 INSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMI 156
Query: 121 HGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALITGYTHNKKF 180
HG VIQ+GFI DVYTSTALVH+YCTCLSISDASQLFDEMPERN+VTWNALITGYTHN+KF
Sbjct: 157 HGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKF 216
Query: 181 MEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTL 240
++AIDAFRGML GA+PSERTVVVVLSACSHLG+ NQGKWIHEFIY NRLRLNVFVGT L
Sbjct: 217 VKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTAL 276
Query: 241 IDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKPDK 300
IDMYAKCG V E EKVFEEIREKNVYTWNVLISGYAMNG+GDAALQAFSRM+MENFKPD+
Sbjct: 277 IDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDE 336
Query: 301 VTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQ 360
VTFLGVLCACCHQGLVTEGR QFMSMKQQFGLQP+IEHYGCMVDLLGRAGLLEEALELIQ
Sbjct: 337 VTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQ 396
Query: 361 SMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIE 420
SMS++PDPIIWRALLCACRVHG+TKLGEY IKRLIELEPNNGEN+VLLSN+YSRE RW E
Sbjct: 397 SMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAE 456
Query: 421 VGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC--------------- 480
VGKLRGMM+LRGI KVPGCSSIEINN V+EF ASNDRKPEF+AI
Sbjct: 457 VGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGY 516
Query: 481 ---TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV 535
TDMAL+DIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRIC DCHEFFKV
Sbjct: 517 VTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKV 576
BLAST of Sed0011836 vs. ExPASy TrEMBL
Match:
A0A5A7US40 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002740 PE=3 SV=1)
HSP 1 Score: 917.9 bits (2371), Expect = 2.1e-263
Identity = 452/555 (81.44%), Postives = 487/555 (87.75%), Query Frame = 0
Query: 1 MSKSVHTQVMDLPSLSNNGTIFPDCID---SFFLMKVIDDSVSRNGFESIAPIFSKFRSS 60
M K VHTQ MDLP N PD D F+MK+IDDSVS NGFESIA IFSK+R S
Sbjct: 1 MLKFVHTQAMDLPFQETNDRKTPDYNDVRRGHFVMKLIDDSVSHNGFESIARIFSKYRGS 60
Query: 61 IDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHLCDNQLGKMI 120
I++Q CNSMIR YLDLNKH NSL IFA M KFSILPD TFP VLKATA LCD ++GKMI
Sbjct: 61 INSQQCNSMIRRYLDLNKHLNSLYIFAQMHKFSILPDLSTFPAVLKATAQLCDTEVGKMI 120
Query: 121 HGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALITGYTHNKKF 180
HG VIQ+GFI DVYTSTALVHMY TCLSISDASQ+FDEM ERN+VTWNALITGYTHN+KF
Sbjct: 121 HGIVIQMGFICDVYTSTALVHMYSTCLSISDASQVFDEMAERNAVTWNALITGYTHNRKF 180
Query: 181 MEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTL 240
MEAIDAFRGML GA+PSERTVV+VLSACSHLG+LNQGKWIH+FIY NRLRLNVFVGT L
Sbjct: 181 MEAIDAFRGMLAAGAQPSERTVVLVLSACSHLGALNQGKWIHDFIYHNRLRLNVFVGTAL 240
Query: 241 IDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKPDK 300
IDMYAKCG V+E EKVFEEIREKNVYTWNVLISGYAMNG+GDAALQAFSRM+MENFKPD+
Sbjct: 241 IDMYAKCGAVDEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDE 300
Query: 301 VTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQ 360
VTFLGVLCACCHQGLVTEGR+QFMSMKQQFGLQP+IEHYGCMVDLLGRAGLLEEALELIQ
Sbjct: 301 VTFLGVLCACCHQGLVTEGRRQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQ 360
Query: 361 SMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIE 420
SMSM+PDPIIWRALLCACRVHG+TKLGEY +KRL+ELEPNNGEN+VLLSN+Y+RE RW E
Sbjct: 361 SMSMEPDPIIWRALLCACRVHGNTKLGEYIMKRLVELEPNNGENYVLLSNIYARERRWAE 420
Query: 421 VGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC--------------- 480
VGKLRGMM+LRGI KVPGCSSIEINN V+EF ASNDRKPE++AI
Sbjct: 421 VGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEYEAIYKQLDNLIKKLKENGY 480
Query: 481 ---TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKV 535
TDMAL+D+EKEEKEHS+MYHSEKLALAFGLLNSPLDCTLRIVKNLRIC DCHEFFKV
Sbjct: 481 VTGTDMALYDVEKEEKEHSLMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKV 540
BLAST of Sed0011836 vs. ExPASy TrEMBL
Match:
A0A6J1BZP4 (pentatricopeptide repeat-containing protein At4g21065-like OS=Momordica charantia OX=3673 GN=LOC111006955 PE=3 SV=1)
HSP 1 Score: 916.4 bits (2367), Expect = 6.1e-263
Identity = 456/565 (80.71%), Postives = 490/565 (86.73%), Query Frame = 0
Query: 1 MSKSVHTQV-MDLPSLSNNGTIFPDCI------------DSFFLMKVIDDSVSRNGFESI 60
+SK +HTQ+ M+LP S N PD + D +FLMK+IDDSVS +GFESI
Sbjct: 73 ISKFMHTQLTMNLPPQSTNERKIPDYMDVVRKEGNDMRSDGYFLMKLIDDSVSHDGFESI 132
Query: 61 APIFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAH 120
APIFSKFR I+ Q+CN MIRGYLD NKH NSLLIFAHM KFSILPDS TFP V+KATA
Sbjct: 133 APIFSKFRGVINCQLCNWMIRGYLDSNKHLNSLLIFAHMHKFSILPDSSTFPAVIKATAR 192
Query: 121 LCDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNAL 180
C+ +LGKMIHG+VIQ+GFIRDVYTSTALVHMYCTCLSISDA QLFDEMPERNSVTWNAL
Sbjct: 193 SCNVELGKMIHGTVIQMGFIRDVYTSTALVHMYCTCLSISDAYQLFDEMPERNSVTWNAL 252
Query: 181 ITGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRL 240
ITGYTHN+KFMEAI+AFRGML GAEPSERTVVVVLSACSHLG+LNQG WIHEFIYQN+L
Sbjct: 253 ITGYTHNRKFMEAINAFRGMLAAGAEPSERTVVVVLSACSHLGALNQGTWIHEFIYQNKL 312
Query: 241 RLNVFVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSR 300
RLNVFVGT LIDMYAKCG VEEAEKVFEEIREKNVYTWNVLISGYAMNG+GD ALQAFS
Sbjct: 313 RLNVFVGTALIDMYAKCGAVEEAEKVFEEIREKNVYTWNVLISGYAMNGQGDEALQAFSM 372
Query: 301 MVMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAG 360
M+ ENFKPD+VTFLGVLCACCHQGLVTEGR+QF+SMKQ FGL+P+IEHYGCMVDLLGRAG
Sbjct: 373 MLRENFKPDEVTFLGVLCACCHQGLVTEGRRQFVSMKQHFGLRPRIEHYGCMVDLLGRAG 432
Query: 361 LLEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSN 420
LLEEALELIQSMSM+PDPIIWRALLCACRVHG+TKLGEY I+RLI+LEPNNGEN+VLLSN
Sbjct: 433 LLEEALELIQSMSMEPDPIIWRALLCACRVHGNTKLGEYAIRRLIDLEPNNGENYVLLSN 492
Query: 421 LYSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC----- 480
LYSRE RWIEVGKLRGMMSLRGIGKVPGCSSIEI N V+EFAASNDRKPEF AI
Sbjct: 493 LYSRERRWIEVGKLRGMMSLRGIGKVPGCSSIEIKNVVYEFAASNDRKPEFDAIYKQLDN 552
Query: 481 -------------TDMALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRI 535
T MALFDIE+EEKEH VMYHSEKLALAFGLLNSPLDC LRIVKNLRI
Sbjct: 553 VIEKLKANGYITGTGMALFDIEEEEKEHCVMYHSEKLALAFGLLNSPLDCALRIVKNLRI 612
BLAST of Sed0011836 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 414.5 bits (1064), Expect = 1.5e-115
Identity = 208/531 (39.17%), Postives = 328/531 (61.77%), Query Frame = 0
Query: 50 IFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSIL-PDSVTFPGVLKATAHL 109
+FSK I+ + N++IRGY ++ ++ ++ M ++ PD+ T+P ++KA +
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 110 CDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALI 169
D +LG+ IH VI+ GF +Y +L+H+Y C ++ A ++FD+MPE++ V WN++I
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 170 TGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLR 229
G+ N K EA+ + M G +P T+V +LSAC+ +G+L GK +H ++ + L
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 230 LNVFVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRM 289
N+ L+D+YA+CG VEEA+ +F+E+ +KN +W LI G A+NG G A++ F M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 290 -VMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAG 349
E P ++TF+G+L AC H G+V EG + F M++++ ++P+IEH+GCMVDLL RAG
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 350 LLEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSN 409
+++A E I+SM M+P+ +IWR LL AC VHGD+ L E+ ++++LEPN+ ++VLLSN
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 434
Query: 410 LYSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAICTDM-- 469
+Y+ E RW +V K+R M G+ KVPG S +E+ N V EF + P+ AI +
Sbjct: 435 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 494
Query: 470 ----------------ALFDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRI 529
D+E+EEKE++V+YHSEK+A+AF L+++P + +VKNLR+
Sbjct: 495 MTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRV 554
Query: 530 CSDCHEFFKVVSLVYKRYIVVRDRNPISSVVLAFLRWKSRKSSRAAAQQHW 561
C+DCH K+VS VY R IVVRDR+ R+ K+ + Q +W
Sbjct: 555 CADCHLAIKLVSKVYNREIVVRDRS----------RFHHFKNGSCSCQDYW 595
BLAST of Sed0011836 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 412.9 bits (1060), Expect = 4.2e-115
Identity = 212/521 (40.69%), Postives = 320/521 (61.42%), Query Frame = 0
Query: 34 VIDDSVSRNGFESIAPIFSKFRSSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILP 93
+I SR E+ +F + D N+MI GY + + +L +F M+K ++ P
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVK-DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 265
Query: 94 DSVTFPGVLKATAHLCDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLF 153
D T V+ A A +LG+ +H + GF ++ AL+ +Y C + A LF
Sbjct: 266 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 325
Query: 154 DEMPERNSVTWNALITGYTHNKKFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLN 213
+ +P ++ ++WN LI GYTH + EA+ F+ MLR G P++ T++ +L AC+HLG+++
Sbjct: 326 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 385
Query: 214 QGKWIHEFIYQNRLR--LNV-FVGTTLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLIS 273
G+WIH +I RL+ N + T+LIDMYAKCG +E A +VF I K++ +WN +I
Sbjct: 386 IGRWIHVYI-DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 445
Query: 274 GYAMNGKGDAALQAFSRMVMENFKPDKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQ 333
G+AM+G+ DA+ FSRM +PD +TF+G+L AC H G++ GR F +M Q + +
Sbjct: 446 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 505
Query: 334 PKIEHYGCMVDLLGRAGLLEEALELIQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKR 393
PK+EHYGCM+DLLG +GL +EA E+I M M+PD +IW +LL AC++HG+ +LGE +
Sbjct: 506 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 565
Query: 394 LIELEPNNGENFVLLSNLYSREGRWIEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAA 453
LI++EP N ++VLLSN+Y+ GRW EV K R +++ +G+ KVPGCSSIEI++ V EF
Sbjct: 566 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 625
Query: 454 SNDRKPEFKAIC------------------TDMALFDIEKEEKEHSVMYHSEKLALAFGL 513
+ P + I T L ++E+E KE ++ +HSEKLA+AFGL
Sbjct: 626 GDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 685
Query: 514 LNSPLDCTLRIVKNLRICSDCHEFFKVVSLVYKRYIVVRDR 534
+++ L IVKNLR+C +CHE K++S +YKR I+ RDR
Sbjct: 686 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDR 724
BLAST of Sed0011836 vs. TAIR 10
Match:
AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 399.1 bits (1024), Expect = 6.3e-111
Identity = 206/496 (41.53%), Postives = 298/496 (60.08%), Query Frame = 0
Query: 56 SSIDTQMCNSMIRGYLDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKATAHLCDNQLGK 115
S D + NSM RGY +F +L+ ILPD+ TFP +LKA A + G+
Sbjct: 90 SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGR 149
Query: 116 MIHGSVIQLGFIRDVYTSTALVHMYCTCLSISDASQLFDEMPERNSVTWNALITGYTHNK 175
+H ++LG +VY L++MY C + A +FD + E V +NA+ITGY
Sbjct: 150 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 209
Query: 176 KFMEAIDAFRGMLRVGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGT 235
+ EA+ FR M +P+E T++ VLS+C+ LGSL+ GKWIH++ ++ V V T
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 269
Query: 236 TLIDMYAKCGVVEEAEKVFEEIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKP 295
LIDM+AKCG +++A +FE++R K+ W+ +I YA +GK + ++ F RM EN +P
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
Query: 296 DKVTFLGVLCACCHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALEL 355
D++TFLG+L AC H G V EGRK F M +FG+ P I+HYG MVDLL RAG LE+A E
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 356 IQSMSMKPDPIIWRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRW 415
I + + P P++WR LL AC H + L E +R+ EL+ ++G ++V+LSNLY+R +W
Sbjct: 390 IDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKW 449
Query: 416 IEVGKLRGMMSLRGIGKVPGCSSIEINNAVFEFAASNDRKP----------------EFK 475
V LR +M R KVPGCSSIE+NN V EF + + K +
Sbjct: 450 EYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLS 509
Query: 476 AICTDMALF---DIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEF 533
D ++ ++ +EKE ++ YHSEKLA+ FGLLN+P T+R+VKNLR+C DCH
Sbjct: 510 GYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 569
BLAST of Sed0011836 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 388.7 bits (997), Expect = 8.6e-108
Identity = 207/536 (38.62%), Postives = 307/536 (57.28%), Query Frame = 0
Query: 64 NSMIRGY--LDLNKHFNSLLIFAHMLKFSIL-PDSVTFPGVLKATAHLCDNQLGKMIHGS 123
N++IRG+ D +K ++ +F M+ + P+ TFP VLKA A Q GK IHG
Sbjct: 94 NTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 153
Query: 124 VIQLGFIRDVYTSTALVHMYCTCLSISD-------------------------------- 183
++ GF D + + LV MY C + D
Sbjct: 154 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNV 213
Query: 184 -------------ASQLFDEMPERNSVTWNALITGYTHNKKFMEAIDAFRGMLRVGAEPS 243
A LFD+M +R+ V+WN +I+GY+ N F +A++ FR M + P+
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 244 ERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTLIDMYAKCGVVEEAEKVFE 303
T+V VL A S LGSL G+W+H + + +R++ +G+ LIDMY+KCG++E+A VFE
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 304 EIREKNVYTWNVLISGYAMNGKGDAALQAFSRMVMENFKPDKVTFLGVLCACCHQGLVTE 363
+ +NV TW+ +I+G+A++G+ A+ F +M +P V ++ +L AC H GLV E
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 364 GRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQSMSMKPDPIIWRALLCAC 423
GR+ F M GL+P+IEHYGCMVDLLGR+GLL+EA E I +M +KPD +IW+ALL AC
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453
Query: 424 RVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIEVGKLRGMMSLRGIGKVPG 483
R+ G+ ++G+ L+++ P++ +V LSN+Y+ +G W EV ++R M + I K PG
Sbjct: 454 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 513
Query: 484 CSSIEINNAVFEFAASNDRKPEFKAI------------------CTDMALFDIEKEEKEH 534
CS I+I+ + EF +D P+ K I T L ++E+E+KE+
Sbjct: 514 CSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKEN 573
BLAST of Sed0011836 vs. TAIR 10
Match:
AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 386.0 bits (990), Expect = 5.6e-107
Identity = 209/545 (38.35%), Postives = 308/545 (56.51%), Query Frame = 0
Query: 49 PIFSKFRSSIDTQMCNSMIRGY---LDLNKHFNSLLIFAHMLKFSILPDSVTFPGVLKAT 108
PIF +++ + N +IR + + + + ++ M + PD TFP +L +
Sbjct: 13 PIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSF 72
Query: 109 AHLCDNQLGKMIHGSVIQLGFIRDVYTSTALVHMYCTCLS-------------------- 168
+ LG+ H ++ G +D + T+L++MY +C
Sbjct: 73 HNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWN 132
Query: 169 -----------ISDASQLFDEMPERNSVTWNALITGYTHNKKFMEAIDAFRGML-----R 228
I DA +LFDEMPERN ++W+ LI GY K+ EA+D FR M
Sbjct: 133 SVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNE 192
Query: 229 VGAEPSERTVVVVLSACSHLGSLNQGKWIHEFIYQNRLRLNVFVGTTLIDMYAKCGVVEE 288
P+E T+ VLSAC LG+L QGKW+H +I + + +++ +GT LIDMYAKCG +E
Sbjct: 193 AFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLER 252
Query: 289 AEKVFEEI-REKNVYTWNVLISGYAMNGKGDAALQAFSRM-VMENFKPDKVTFLGVLCAC 348
A++VF + +K+V ++ +I AM G D Q FS M +N P+ VTF+G+L AC
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Query: 349 CHQGLVTEGRKQFMSMKQQFGLQPKIEHYGCMVDLLGRAGLLEEALELIQSMSMKPDPII 408
H+GL+ EG+ F M ++FG+ P I+HYGCMVDL GR+GL++EA I SM M+PD +I
Sbjct: 313 VHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 372
Query: 409 WRALLCACRVHGDTKLGEYTIKRLIELEPNNGENFVLLSNLYSREGRWIEVGKLRGMMSL 468
W +LL R+ GD K E +KRLIEL+P N +VLLSN+Y++ GRW+EV +R M +
Sbjct: 373 WGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEV 432
Query: 469 RGIGKVPGCSSIEINNAVFEFAASNDRKPEFKAIC------------------TDMALFD 528
+GI KVPGCS +E+ V EF ++ + E + I T L D
Sbjct: 433 KGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLD 492
Query: 529 IEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICSDCHEFFKVVSLVYKRYIV 535
+ +++KE ++ YHSEKLA+AF L+ + +RI+KNLRIC DCH K++S ++ R IV
Sbjct: 493 LNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIV 552
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023529316.1 | 7.4e-271 | 82.62 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... | [more] |
XP_038878567.1 | 6.3e-270 | 82.09 | pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida] | [more] |
XP_022925029.1 | 3.1e-269 | 82.09 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata] | [more] |
XP_023003968.1 | 2.9e-267 | 82.70 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] | [more] |
XP_004138309.2 | 4.2e-266 | 83.06 | pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus] >KGN6370... | [more] |
Match Name | E-value | Identity | Description | |
A8MQA3 | 2.1e-114 | 39.17 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 6.0e-114 | 40.69 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q8LK93 | 8.9e-110 | 41.53 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
Q9FI80 | 1.2e-106 | 38.62 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Q683I9 | 7.8e-106 | 38.35 | Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EAY2 | 1.5e-269 | 82.09 | pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata... | [more] |
A0A6J1KY52 | 1.4e-267 | 82.70 | pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima O... | [more] |
A0A0A0LUK8 | 2.0e-266 | 83.06 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0115... | [more] |
A0A5A7US40 | 2.1e-263 | 81.44 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1BZP4 | 6.1e-263 | 80.71 | pentatricopeptide repeat-containing protein At4g21065-like OS=Momordica charanti... | [more] |
Match Name | E-value | Identity | Description | |
AT4G21065.1 | 1.5e-115 | 39.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 4.2e-115 | 40.69 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G02980.1 | 6.3e-111 | 41.53 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G48910.1 | 8.6e-108 | 38.62 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G62890.1 | 5.6e-107 | 38.35 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |