Sed0011793 (gene) Chayote v1

Overview


Name	Sed0011793
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Mitochondrial transcription termination factor family protein
Location	LG09: 36333706 .. 36335309 (+)
RNA-Seq Expression	Sed0011793
Synteny	Sed0011793

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGCATTTACCAAAATCCTATAAAATATACAAGTTTAGTTCAGCAGCAATTGATATGGAATCTGTGATGAGAAAGTCCTCTAATTCTAAAGACTGTTGTTCAACTAAAAGAAGAAAAATATATATATAATTTTCAAAGAAAAAAAAATCTTGTTCAAAAACAATTTTTTCGAGGAAAATGAATGCAAGAACGAAGATTATGGAGCCAAGTTACGACATGTCGACATTCAAAAATCCCAAAAAAAGAAAAAGATATTTGTTCAACCGACCTGTAGAATAGCAGAATCTTCATCTTCATCTTCATCTTCAACCTCAATCCAATCCTCTTCCCACATGTTTCAGATCCAGACCTTCAATGGCGGCCTCCACTTCAAATCCAACCTCCCCCCTCCTCTCCGCAAAACCCCAACCATTCTCAGACCAATCTCCTCCAAATTCTCACCAGAACACCACTCCTTCACCATCACCTACCTCACAGAAACCTGCAAACTACCGCCGGAAACCGCCATTGCAACGTCGGAGAAGATCCAGCTCCGCAGCCGCGAGAAGCCGGACTCCGTCATAGCGCTGCTCAAGAGCCACGGTTTCTCCACATCGCAACTCTCAAAACTCATCCCTAAACATCCGTCCCTCCTCCACTCCAACGTCGACGCCACAATCCTCCCTAAACTCCGATTCTTCTACTCCATCGGCATCTCCAGGCCAGATCTCGCCAGATCCCTAACCCTAGATCCAACCATTCTCAACCGAAGCTTGGAAAATCAAATCGTGCCGCATTACACGTTCCTGAAGAGCATTCTCAAATCCGACGCCAAAATCGCCGCCGCGTTGAAGCGTACATCGCGGATCTTCCTCTCCAAGAATCTCATCCCGAACGCCGCCGTCCTGCAAGAACACGGCGTACCGCAGCGCTCGATCGCGCTGTTGATAACGCAATTTCCCGAAACGCTGATGCAGAAGCTCAACCGATTCGAAGAAACCGTAGCGGAAATCAAGCAGATCGGGTTCGATCCGGCGAAATCGACGTTCGTGTTGGCGATGCACGCGATCTCCGGCGACGGGAACAGGTCGCTGTGGAACCGGTGCTACGACGTGTACAAGCGGTGGGGGTGGACGAAGGAGGAGATTGTGGCGGCGTTTAGGAAGCATCCGCACTGCATGATCTTGTCGGAGGCGAAGATCTCGAAGGCGATGGAGTTTTTCACGGCGGAGATGGAGCTGCCGGCGGCGGCGATCGCGAGGAATCCGGTGGTTCTGCTGTACAGCTTTGAGAGGAGGATTGTTCCGAGGTGTGGTGTGATCAGAGCTCTGTGGAAGAAAGGATTGGTGAAGAGAGGTCTGAGCTTGACGACGGTGCTGTTGCCGGCGGAGAAGAGATTTCTGGAGGTTTTTGTGAACAGATTTGTTGGGGAAGTTCCTGAGTTGATGAATCTGTATCTTGGGAAGGTTGATCTTCATCGAGTCTTGGCTTCAATTTTGTAGGTAATTTTATTTGATGAGATTTTTTTTTTTTTTTTGAGGTTTTTGTTTTAGTTCTTGGTGTTTGTTTTCTAATTTTATTATTGTGTTTAAAATGTCTTTTTTTTTTAGTAAATATTCGGGGG

mRNA sequence

CTGGCATTTACCAAAATCCTATAAAATATACAAGTTTAGTTCAGCAGCAATTGATATGGAATCTGTGATGAGAAAGTCCTCTAATTCTAAAGACTGTTGTTCAACTAAAAGAAGAAAAATATATATATAATTTTCAAAGAAAAAAAAATCTTGTTCAAAAACAATTTTTTCGAGGAAAATGAATGCAAGAACGAAGATTATGGAGCCAAGTTACGACATGTCGACATTCAAAAATCCCAAAAAAAGAAAAAGATATTTGTTCAACCGACCTGTAGAATAGCAGAATCTTCATCTTCATCTTCATCTTCAACCTCAATCCAATCCTCTTCCCACATGTTTCAGATCCAGACCTTCAATGGCGGCCTCCACTTCAAATCCAACCTCCCCCCTCCTCTCCGCAAAACCCCAACCATTCTCAGACCAATCTCCTCCAAATTCTCACCAGAACACCACTCCTTCACCATCACCTACCTCACAGAAACCTGCAAACTACCGCCGGAAACCGCCATTGCAACGTCGGAGAAGATCCAGCTCCGCAGCCGCGAGAAGCCGGACTCCGTCATAGCGCTGCTCAAGAGCCACGGTTTCTCCACATCGCAACTCTCAAAACTCATCCCTAAACATCCGTCCCTCCTCCACTCCAACGTCGACGCCACAATCCTCCCTAAACTCCGATTCTTCTACTCCATCGGCATCTCCAGGCCAGATCTCGCCAGATCCCTAACCCTAGATCCAACCATTCTCAACCGAAGCTTGGAAAATCAAATCGTGCCGCATTACACGTTCCTGAAGAGCATTCTCAAATCCGACGCCAAAATCGCCGCCGCGTTGAAGCGTACATCGCGGATCTTCCTCTCCAAGAATCTCATCCCGAACGCCGCCGTCCTGCAAGAACACGGCGTACCGCAGCGCTCGATCGCGCTGTTGATAACGCAATTTCCCGAAACGCTGATGCAGAAGCTCAACCGATTCGAAGAAACCGTAGCGGAAATCAAGCAGATCGGGTTCGATCCGGCGAAATCGACGTTCGTGTTGGCGATGCACGCGATCTCCGGCGACGGGAACAGGTCGCTGTGGAACCGGTGCTACGACGTGTACAAGCGGTGGGGGTGGACGAAGGAGGAGATTGTGGCGGCGTTTAGGAAGCATCCGCACTGCATGATCTTGTCGGAGGCGAAGATCTCGAAGGCGATGGAGTTTTTCACGGCGGAGATGGAGCTGCCGGCGGCGGCGATCGCGAGGAATCCGGTGGTTCTGCTGTACAGCTTTGAGAGGAGGATTGTTCCGAGGTGTGGTGTGATCAGAGCTCTGTGGAAGAAAGGATTGGTGAAGAGAGGTCTGAGCTTGACGACGGTGCTGTTGCCGGCGGAGAAGAGATTTCTGGAGGTTTTTGTGAACAGATTTGTTGGGGAAGTTCCTGAGTTGATGAATCTGTATCTTGGGAAGGTTGATCTTCATCGAGTCTTGGCTTCAATTTTGTAGGTAATTTTATTTGATGAGATTTTTTTTTTTTTTTTGAGGTTTTTGTTTTAGTTCTTGGTGTTTGTTTTCTAATTTTATTATTGTGTTTAAAATGTCTTTTTTTTTTAGTAAATATTCGGGGG

Coding sequence (CDS)

ATGTTTCAGATCCAGACCTTCAATGGCGGCCTCCACTTCAAATCCAACCTCCCCCCTCCTCTCCGCAAAACCCCAACCATTCTCAGACCAATCTCCTCCAAATTCTCACCAGAACACCACTCCTTCACCATCACCTACCTCACAGAAACCTGCAAACTACCGCCGGAAACCGCCATTGCAACGTCGGAGAAGATCCAGCTCCGCAGCCGCGAGAAGCCGGACTCCGTCATAGCGCTGCTCAAGAGCCACGGTTTCTCCACATCGCAACTCTCAAAACTCATCCCTAAACATCCGTCCCTCCTCCACTCCAACGTCGACGCCACAATCCTCCCTAAACTCCGATTCTTCTACTCCATCGGCATCTCCAGGCCAGATCTCGCCAGATCCCTAACCCTAGATCCAACCATTCTCAACCGAAGCTTGGAAAATCAAATCGTGCCGCATTACACGTTCCTGAAGAGCATTCTCAAATCCGACGCCAAAATCGCCGCCGCGTTGAAGCGTACATCGCGGATCTTCCTCTCCAAGAATCTCATCCCGAACGCCGCCGTCCTGCAAGAACACGGCGTACCGCAGCGCTCGATCGCGCTGTTGATAACGCAATTTCCCGAAACGCTGATGCAGAAGCTCAACCGATTCGAAGAAACCGTAGCGGAAATCAAGCAGATCGGGTTCGATCCGGCGAAATCGACGTTCGTGTTGGCGATGCACGCGATCTCCGGCGACGGGAACAGGTCGCTGTGGAACCGGTGCTACGACGTGTACAAGCGGTGGGGGTGGACGAAGGAGGAGATTGTGGCGGCGTTTAGGAAGCATCCGCACTGCATGATCTTGTCGGAGGCGAAGATCTCGAAGGCGATGGAGTTTTTCACGGCGGAGATGGAGCTGCCGGCGGCGGCGATCGCGAGGAATCCGGTGGTTCTGCTGTACAGCTTTGAGAGGAGGATTGTTCCGAGGTGTGGTGTGATCAGAGCTCTGTGGAAGAAAGGATTGGTGAAGAGAGGTCTGAGCTTGACGACGGTGCTGTTGCCGGCGGAGAAGAGATTTCTGGAGGTTTTTGTGAACAGATTTGTTGGGGAAGTTCCTGAGTTGATGAATCTGTATCTTGGGAAGGTTGATCTTCATCGAGTCTTGGCTTCAATTTTGTAG

Protein sequence

MFQIQTFNGGLHFKSNLPPPLRKTPTILRPISSKFSPEHHSFTITYLTETCKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATILPKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTSRIFLSKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDPAKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAMEFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEKRFLEVFVNRFVGEVPELMNLYLGKVDLHRVLASIL

Homology

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BLAST of Sed0011793 vs. NCBI nr
Match: XP_022991835.1 (uncharacterized protein LOC111488362 [Cucurbita maxima])

HSP 1 Score: 495.4 bits (1274), Expect = 4.5e-136
Identity = 254/393 (64.63%), Postives = 307/393 (78.12%), Query Frame = 0


Query: 1   MFQIQTFNGG----------LHFKSNLPPPLRKTPTILRPISSKFSPEHHSFTITYLTET 60
           M Q+Q F+G             F+S +P P+ +  TI R IS+KFS EHH+FTI+YLT+T
Sbjct: 1   MLQLQNFHGVRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLISAKFSAEHHNFTISYLTDT 60

Query: 61  CKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATIL 120
           C L PETAI  SEK+QL +REKPDSV+ LL+SHGFS SQ+SKL+ K PSLL ++V+ T+L
Sbjct: 61  CGLLPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLL 120

Query: 121 PKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTS 180
           PKL FFYSIG SR  LAR+LT DPT+L RSL+NQI+P Y +LKS+L SDAK+ AALKRTS
Sbjct: 121 PKLEFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTS 180

Query: 181 RIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDP 240
            IFL   +K L+PN  VL++ GVPQ  IALL+T FPETLMQK + FEETVAEIK +GFDP
Sbjct: 181 WIFLEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDP 240

Query: 241 AKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAM 300
           +KSTFVLA+HAISG GNRS+WNRCYDVY++WGWTKEEI+ AFRKHPHCMILSE KISK M
Sbjct: 241 SKSTFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKEEILMAFRKHPHCMILSEEKISKGM 300

Query: 301 EFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEK 360
           E+FT +M   A  IA+ PVVL +S E+RI+PRC V+R L  +GLVKR LSLTTVLLP EK
Sbjct: 301 EYFTEKMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEK 360

Query: 361 RFLEVFVNRFVGEVPELMNLYLGKVDLHRVLAS 381
           RFLE FV +++  VPELM+LY G  +L  VLAS
Sbjct: 361 RFLETFVIKYLENVPELMDLYQGNANLDEVLAS 393

[Close]

BLAST of Sed0011793 vs. NCBI nr
Match: KAG6575851.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 493.0 bits (1268), Expect = 2.3e-135
Identity = 252/393 (64.12%), Postives = 307/393 (78.12%), Query Frame = 0


Query: 1   MFQIQTFNG----------GLHFKSNLPPPLRKTPTILRPISSKFSPEHHSFTITYLTET 60
           M Q+Q F+G             F+S +P P+ +  TI R I++KFS EHH+FTI+YLT+T
Sbjct: 1   MLQLQNFHGLRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDT 60

Query: 61  CKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATIL 120
           C L PETAI  SEK+QL +REKPDSV+ LL+SHGFS SQ+SKL+ K PSLL ++V+ T+L
Sbjct: 61  CGLLPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLL 120

Query: 121 PKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTS 180
           PKL FFYSIG SR  LAR+LT DPT+L RSL+NQI+P Y +LKS+L SDAK+ AALKRTS
Sbjct: 121 PKLEFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTS 180

Query: 181 RIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDP 240
            IFL   +K L+PN  VL++ GVPQ  IALL+T FPETLMQK + FEETVAEIK +GFDP
Sbjct: 181 WIFLEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDP 240

Query: 241 AKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAM 300
           +KSTFVLA+HAISG GNRS+WNRCYDVY++WGWTK+EI+ AFRKHPHCMILSE KISK M
Sbjct: 241 SKSTFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGM 300

Query: 301 EFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEK 360
           E+FT  M   A  IA+ PVVL +S E+RI+PRC V+R L  +GLVKR LSLTTVLLP EK
Sbjct: 301 EYFTETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEK 360

Query: 361 RFLEVFVNRFVGEVPELMNLYLGKVDLHRVLAS 381
           RFLE FV +++ +VPELM+LY G  +L  VLAS
Sbjct: 361 RFLETFVIKYLDDVPELMDLYQGNANLDEVLAS 393

[Close]

BLAST of Sed0011793 vs. NCBI nr
Match: XP_023549206.1 (uncharacterized protein LOC111807635 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 492.7 bits (1267), Expect = 2.9e-135
Identity = 252/393 (64.12%), Postives = 307/393 (78.12%), Query Frame = 0


Query: 1   MFQIQTFNG----------GLHFKSNLPPPLRKTPTILRPISSKFSPEHHSFTITYLTET 60
           M Q+Q F+G             F+S +P P+ +  TI R I++KFS EHH+FTI+YLT+T
Sbjct: 1   MLQLQNFHGLRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDT 60

Query: 61  CKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATIL 120
           C L PETAI  SEK+QL +REKPDSV+ LL+SHGFS SQ+SKL+ K PSLL ++V+ T+L
Sbjct: 61  CGLLPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLL 120

Query: 121 PKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTS 180
           PKL FFYSIG SR  LAR+LT DPT+L RSL+NQI+P Y +LKS+L SDAK+ AALKRTS
Sbjct: 121 PKLEFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTS 180

Query: 181 RIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDP 240
            IFL   +K L+PN  VL++ GVPQ  IALL+T FPETLMQK + FEETVAEIK +GFDP
Sbjct: 181 WIFLEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDP 240

Query: 241 AKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAM 300
           +KSTFVLA+HAISG GNRS+WNRCYDVY++WGWTK+EI+ AFRKHPHCMILSE KISK M
Sbjct: 241 SKSTFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGM 300

Query: 301 EFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEK 360
           E+FT  M   A  IA+ PVVL +S E+RI+PRC V+R L  +GLVKR LSLTTVLLP EK
Sbjct: 301 EYFTETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEK 360

Query: 361 RFLEVFVNRFVGEVPELMNLYLGKVDLHRVLAS 381
           RFLE FV +++ +VPELM+LY G  +L  VLAS
Sbjct: 361 RFLETFVIKYLEDVPELMDLYQGNANLDEVLAS 393

[Close]

BLAST of Sed0011793 vs. NCBI nr
Match: KAG7014386.1 (Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 490.7 bits (1262), Expect = 1.1e-134
Identity = 253/396 (63.89%), Postives = 308/396 (77.78%), Query Frame = 0


Query: 1   MFQIQTFNG-GLHF------------KSNLPPPLRKTPTILRPISSKFSPEHHSFTITYL 60
           M Q+Q F+G  L F            +S +P P+ +  TI R I++KFS EHH+FTI+YL
Sbjct: 1   MLQLQNFHGLRLKFDLCAPLRSFRSLRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYL 60

Query: 61  TETCKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDA 120
           T+TC L PETAI  SEK+QL +REKPDSV+ LL+SHGFS SQ+SKL+ K PSLL ++V+ 
Sbjct: 61  TDTCGLLPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQ 120

Query: 121 TILPKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALK 180
           T+LPKL FFYSIG SR  LAR+LT DPT+L RSL+NQI+P Y +LKS+L SDAK+ AALK
Sbjct: 121 TLLPKLEFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALK 180

Query: 181 RTSRIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIG 240
           RTS IFL   +K L+PN  VL++ GVPQ  IALL+T FPETLMQK + FEETVAEIK +G
Sbjct: 181 RTSWIFLEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMG 240

Query: 241 FDPAKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKIS 300
           FDP+KSTFVLA+HAISG GNRS+WNRCYDVY++WGWTK+EI+ AFRKHPHCMILSE KIS
Sbjct: 241 FDPSKSTFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKIS 300

Query: 301 KAMEFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLP 360
           K ME+FT  M   A  IA+ PVVL +S E+RI+PRC V+R L  +GLVKR LSLTTVLLP
Sbjct: 301 KGMEYFTETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLP 360

Query: 361 AEKRFLEVFVNRFVGEVPELMNLYLGKVDLHRVLAS 381
            EKRFLE FV +++ +VPELM+LY G  +L  VLAS
Sbjct: 361 VEKRFLETFVIKYLDDVPELMDLYQGNANLDEVLAS 396

[Close]

BLAST of Sed0011793 vs. NCBI nr
Match: XP_022953179.1 (uncharacterized protein LOC111455797 [Cucurbita moschata])

HSP 1 Score: 489.6 bits (1259), Expect = 2.5e-134
Identity = 251/393 (63.87%), Postives = 305/393 (77.61%), Query Frame = 0


Query: 1   MFQIQTFNG----------GLHFKSNLPPPLRKTPTILRPISSKFSPEHHSFTITYLTET 60
           M Q+Q F+G             F+S +P P+ +  TI R I++KFS EHH+FTI+YLT+ 
Sbjct: 1   MLQLQNFHGLRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDA 60

Query: 61  CKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATIL 120
           C L PETAI  SEK+QL +REKPDSV+ LL+SHGFS SQ+SKL+ K PSLL ++V+ T+L
Sbjct: 61  CGLLPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLL 120

Query: 121 PKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTS 180
           PKL FFYSIG SR  LAR+LT DPT+L RSL+NQI+P Y +LKS+L SDAK+ AALKRTS
Sbjct: 121 PKLEFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTS 180

Query: 181 RIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDP 240
            IFL   +K L+PN  VL++ GVPQ  IALL+T FPETLMQK + FEETVAEIK +GFDP
Sbjct: 181 WIFLEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDP 240

Query: 241 AKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAM 300
           +KSTFVLA+HAISG GNRS+WNRCYDVY++WGWTK+EI+ AFRKHPHCMILSE KISK M
Sbjct: 241 SKSTFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGM 300

Query: 301 EFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEK 360
           E+FT  M   A  IA+ PVVL +S E+RI+PRC V+R L  +GLVKR LSLTTVLLP EK
Sbjct: 301 EYFTETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEK 360

Query: 361 RFLEVFVNRFVGEVPELMNLYLGKVDLHRVLAS 381
           RFLE FV +++  VPELM+LY G  +L  VLAS
Sbjct: 361 RFLETFVIKYLEAVPELMDLYQGNANLDEVLAS 393

[Close]

BLAST of Sed0011793 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 62/267 (23.22%), Postives = 105/267 (39.33%), Query Frame = 0


Query: 55  PETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATILPKLR 114
           P  A+  +  ++        SV  LL S G S   + +++   P LL S+ ++ ILP LR
Sbjct: 47  PHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLR 106

Query: 115 FFYS-IGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTSRIF 174
           F  + I IS  D+ +S++  P +L  S++ Q+ P  TFLK++                 F
Sbjct: 107 FLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTL----------------GF 166

Query: 175 LSKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDPAKSTFV 234
           + ++ I +           R+  LL++    TL+ K+   EE +                
Sbjct: 167 VGRDTITS-----------RNTVLLVSNVERTLIPKIEYLEEGL---------------- 226

Query: 235 LAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILS-EAKISKAMEFFTA 294
                                    G+T+EE+     + P  +  S +  +   +EFF  
Sbjct: 227 -------------------------GFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIE 245

Query: 295 EMELPAAAIARNPVVLLYSFERRIVPR 320
           EM      + R P    +S ER+I PR
Sbjct: 287 EMRGDVKELKRFPQYFSFSLERKIKPR 245

[Close]

BLAST of Sed0011793 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-07
Identity = 33/109 (30.28%), Postives = 54/109 (49.54%), Query Frame = 0


Query: 79  LLKSHGFSTSQLSKLIPKHPSLLHSNVDATILPKLRFFYSIGISRPDLARSLTLDPTILN 138
           L K  G     + K++ KHP LLH ++D   LP++ F  SIG+   D+ + LT    +L+
Sbjct: 335 LSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLS 394

Query: 139 RSLENQIVPHYTFLKSILKSDAKIAAALKRTSRIFLSKNLIPNAAVLQE 188
            SLE+ + P Y +L + L ++  I         + L + + P    L E
Sbjct: 395 LSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVE 443

[Close]

BLAST of Sed0011793 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07
Identity = 64/285 (22.46%), Postives = 116/285 (40.70%), Query Frame = 0


Query: 71  EKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATILPKLRFFYSIGISRPDLARSL 130
           +K +  + +LKS GF  S +S+++   P +L  N +  I  K+ F   IGI+R ++ R  
Sbjct: 145 DKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDNIERFF 204

Query: 131 TLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTSRIFLSKNLIPNAAVLQEHGV 190
            + P +L    E ++ P                  L    ++  SK+      V +E   
Sbjct: 205 HVFPEVLGIGTETRLKP-----------------LLDEFMKMGFSKD-----DVKKEIAR 264

Query: 191 PQRSIALLITQFPETLMQKLNRFE-ETVAEIKQIGFDPAKSTFVLAMHAISGDGNRSLWN 250
             R + L + + P  L + +N  +   V  +  I     ++ F + +             
Sbjct: 265 EPRVLGLELGELPRCL-ELINTLKCREVIRVSIISEGAFRAGFEVKLRV----------- 324

Query: 251 RCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAMEFFTAEMELPAAAIARNPVVLL 310
              D   ++G  + +      K P  ++     I K +EF T  M      +A  P  L 
Sbjct: 325 ---DCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLG 384

Query: 311 YSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEKRFLEVFV 355
            + +++IVPR  VI  L  KG +   + L  ++ P+ KRF  ++V
Sbjct: 385 VNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYV 391

[Close]

BLAST of Sed0011793 vs. ExPASy TrEMBL
Match: A0A6J1JU20 (uncharacterized protein LOC111488362 OS=Cucurbita maxima OX=3661 GN=LOC111488362 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 2.2e-136
Identity = 254/393 (64.63%), Postives = 307/393 (78.12%), Query Frame = 0


Query: 1   MFQIQTFNGG----------LHFKSNLPPPLRKTPTILRPISSKFSPEHHSFTITYLTET 60
           M Q+Q F+G             F+S +P P+ +  TI R IS+KFS EHH+FTI+YLT+T
Sbjct: 1   MLQLQNFHGVRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLISAKFSAEHHNFTISYLTDT 60

Query: 61  CKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATIL 120
           C L PETAI  SEK+QL +REKPDSV+ LL+SHGFS SQ+SKL+ K PSLL ++V+ T+L
Sbjct: 61  CGLLPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLL 120

Query: 121 PKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTS 180
           PKL FFYSIG SR  LAR+LT DPT+L RSL+NQI+P Y +LKS+L SDAK+ AALKRTS
Sbjct: 121 PKLEFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTS 180

Query: 181 RIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDP 240
            IFL   +K L+PN  VL++ GVPQ  IALL+T FPETLMQK + FEETVAEIK +GFDP
Sbjct: 181 WIFLEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDP 240

Query: 241 AKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAM 300
           +KSTFVLA+HAISG GNRS+WNRCYDVY++WGWTKEEI+ AFRKHPHCMILSE KISK M
Sbjct: 241 SKSTFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKEEILMAFRKHPHCMILSEEKISKGM 300

Query: 301 EFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEK 360
           E+FT +M   A  IA+ PVVL +S E+RI+PRC V+R L  +GLVKR LSLTTVLLP EK
Sbjct: 301 EYFTEKMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEK 360

Query: 361 RFLEVFVNRFVGEVPELMNLYLGKVDLHRVLAS 381
           RFLE FV +++  VPELM+LY G  +L  VLAS
Sbjct: 361 RFLETFVIKYLENVPELMDLYQGNANLDEVLAS 393

[Close]

BLAST of Sed0011793 vs. ExPASy TrEMBL
Match: A0A6J1GNW6 (uncharacterized protein LOC111455797 OS=Cucurbita moschata OX=3662 GN=LOC111455797 PE=3 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 1.2e-134
Identity = 251/393 (63.87%), Postives = 305/393 (77.61%), Query Frame = 0


Query: 1   MFQIQTFNG----------GLHFKSNLPPPLRKTPTILRPISSKFSPEHHSFTITYLTET 60
           M Q+Q F+G             F+S +P P+ +  TI R I++KFS EHH+FTI+YLT+ 
Sbjct: 1   MLQLQNFHGLRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDA 60

Query: 61  CKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATIL 120
           C L PETAI  SEK+QL +REKPDSV+ LL+SHGFS SQ+SKL+ K PSLL ++V+ T+L
Sbjct: 61  CGLLPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLL 120

Query: 121 PKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTS 180
           PKL FFYSIG SR  LAR+LT DPT+L RSL+NQI+P Y +LKS+L SDAK+ AALKRTS
Sbjct: 121 PKLEFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTS 180

Query: 181 RIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDP 240
            IFL   +K L+PN  VL++ GVPQ  IALL+T FPETLMQK + FEETVAEIK +GFDP
Sbjct: 181 WIFLEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDP 240

Query: 241 AKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAM 300
           +KSTFVLA+HAISG GNRS+WNRCYDVY++WGWTK+EI+ AFRKHPHCMILSE KISK M
Sbjct: 241 SKSTFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGM 300

Query: 301 EFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEK 360
           E+FT  M   A  IA+ PVVL +S E+RI+PRC V+R L  +GLVKR LSLTTVLLP EK
Sbjct: 301 EYFTETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEK 360

Query: 361 RFLEVFVNRFVGEVPELMNLYLGKVDLHRVLAS 381
           RFLE FV +++  VPELM+LY G  +L  VLAS
Sbjct: 361 RFLETFVIKYLEAVPELMDLYQGNANLDEVLAS 393

[Close]

BLAST of Sed0011793 vs. ExPASy TrEMBL
Match: A0A2K1XUZ4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G133200 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 1.2e-113
Identity = 205/348 (58.91%), Postives = 268/348 (77.01%), Query Frame = 0


Query: 29  RPISSKFSPEHHSFTITYLTETCKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTS 88
           +PIS K S E  SFTI YL  +C LP E+AI TS+K+Q +S E+PDSV+ALL++HGFS +
Sbjct: 49  KPISCKISTEQDSFTINYLVHSCGLPLESAILTSQKVQFQSPERPDSVLALLRNHGFSRT 108

Query: 89  QLSKLIPKHPSLLHSNVDATILPKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPH 148
           Q+S L+ K P LL SN   T+LPKL FF S+G+SRP LAR+L+ DPT+L RSLENQIVP 
Sbjct: 109 QISSLVKKRPFLLLSNPTNTLLPKLDFFLSLGMSRPHLARTLSSDPTLLTRSLENQIVPS 168

Query: 149 YTFLKSILKSDAKIAAALKRTSRIF---LSKNLIPNAAVLQEHGVPQRSIALLITQFPET 208
           Y FLK+IL+SD KI +A KRT+ IF   LSKNLIPN  +L++ GVPQ  I+LL+T FPE 
Sbjct: 169 YNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGVPQSCISLLLTHFPEA 228

Query: 209 LMQKLNRFEETVAEIKQIGFDPAKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEI 268
           +M+  + F E V E++++GFDP KSTFVLA+HA+ G  N+S+W RC++VY+RWGWTK++I
Sbjct: 229 MMENHDEFSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIWERCFEVYERWGWTKDDI 288

Query: 269 VAAFRKHPHCMILSEAKISKAMEFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRA 328
           ++AFRKHPHCM+LSE KI K ++FF  +M  P+  I   PV+L  S E+RI+PRC VI+ 
Sbjct: 289 LSAFRKHPHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVIQV 348

Query: 329 LWKKGLVKRGLSLTTVLLPAEKRFLEVFVNRFVGEVPELMNLYLGKVD 374
           LW KGL+K+ +SL TVLLP EKRFLE FV +F  EVP+L+++Y GKVD
Sbjct: 349 LWSKGLIKKDISLNTVLLPVEKRFLERFVTKFEEEVPQLLSVYEGKVD 396

[Close]

BLAST of Sed0011793 vs. ExPASy TrEMBL
Match: A0A7N2N432 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 5.8e-113
Identity = 213/353 (60.34%), Postives = 269/353 (76.20%), Query Frame = 0


Query: 29  RPISSKFSPEHHSFTITYLTETCKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTS 88
           +PI+SK S    + TI+YL  +C L PETA   S+K+ L++ EK +SV+ALL++HGFS +
Sbjct: 46  KPITSKISTNQQTSTISYLINSCGLLPETASLVSQKVHLQNPEKANSVLALLRNHGFSQT 105

Query: 89  QLSKLIPKHPSLLHSNVDATILPKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPH 148
           Q+S LI K P LL ++ + T+LPKL FF+SIG S  DLAR LT DPT+L RSLENQIVP 
Sbjct: 106 QISNLIRKRPLLLLADPENTLLPKLEFFHSIGASSTDLARVLTADPTLLTRSLENQIVPC 165

Query: 149 YTFLKSILKSDAKIAAALKRTSRIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPET 208
           Y FLKS+L SD KI  ALKRTS IFL   +KNLIPN + L+E GVP+  I LL+T FPE 
Sbjct: 166 YNFLKSVLLSDKKIVTALKRTSWIFLEGHTKNLIPNISFLRELGVPESCIVLLLTHFPEA 225

Query: 209 LMQKLNRFEETVAEIKQIGFDPAKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEI 268
           LMQK + F   V E+K++GFDP KSTFVLA+HAISG GN+S+W RCY+VY+RWGW+K+EI
Sbjct: 226 LMQKHDNFGHIVNEVKEMGFDPMKSTFVLAIHAISGKGNKSIWERCYEVYRRWGWSKDEI 285

Query: 269 VAAFRKHPHCMILSEAKISKAMEFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRA 328
           + AFRKHPHCMILSE KI +AM+FF  +M  P+  IA+ PVVLL+S ERRIVPRC VI+ 
Sbjct: 286 LLAFRKHPHCMILSEKKIMRAMDFFVNKMGWPSKMIAKCPVVLLFSLERRIVPRCSVIQV 345

Query: 329 LWKKGLVKRGLSLTTVLLPAEKRFLEVFVNRFVGEVPELMNLYLGKVDLHRVL 379
           L  KGLVK+ +SLTTVLLP E+ FLE FV RF  E+P+LM++Y GKV +  ++
Sbjct: 346 LSLKGLVKKDMSLTTVLLPVEESFLERFVTRFQEEIPQLMSVYQGKVYIESII 398

[Close]

BLAST of Sed0011793 vs. ExPASy TrEMBL
Match: A0A0D2MY37 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G141300 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.9e-111
Identity = 210/365 (57.53%), Postives = 273/365 (74.79%), Query Frame = 0


Query: 15  SNLPPPL--RKTPTILRPISSKFSPEHHSFTITYLTETCKLPPETAIATSEKIQLRSREK 74
           + L PPL   +  T L+PI  K + +   FT+TYL  +C L  E+AI+ S+K+Q +S E+
Sbjct: 35  AELKPPLVSLQDETPLKPIVPKTTSKQRPFTVTYLINSCGLSLESAISVSDKVQFQSPER 94

Query: 75  PDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATILPKLRFFYSIGISRPDLARSLTL 134
           PDSV+ LL+++GFS +Q+S LI K P LL S+ + T+LPKL FF SIG+S  +LAR+L+ 
Sbjct: 95  PDSVLTLLRNYGFSKTQISNLIRKRPMLLLSHPENTLLPKLEFFQSIGLSSNELARTLSS 154

Query: 135 DPTILNRSLENQIVPHYTFLKSILKSDAKIAAALKRTSRIFL---SKNLIPNAAVLQEHG 194
           DPT+L RSLENQI+P Y FLKS+L SD KI AALKRT+ +FL   SKNL+PN   L+E G
Sbjct: 155 DPTLLTRSLENQIMPTYDFLKSVLLSDEKIVAALKRTTWVFLEDPSKNLMPNVTYLRESG 214

Query: 195 VPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDPAKSTFVLAMHAISGDGNRSLWN 254
           VPQ  ++LL+T FPE +MQK   F ETV E+K++GFDP KSTFVLA+HA+SG GN+S+W 
Sbjct: 215 VPQSCVSLLLTHFPEAVMQKHEPFVETVREVKEMGFDPKKSTFVLAVHALSGKGNKSIWE 274

Query: 255 RCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAMEFFTAEMELPAAAIARNPVVLL 314
           RCY+VYKRWGW+ ++I++AFRKHPH M+LSE KI K+M +F  EM   + AIA  PVVL 
Sbjct: 275 RCYEVYKRWGWSNDDILSAFRKHPHSMMLSEKKIMKSMGYFVNEMGWASRAIAECPVVLF 334

Query: 315 YSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEKRFLEVFVNRFVGEVPELMNLYL 374
           +S E+RI+PRC V + L  KGL+K G SLTTVLLP EKRFLE FV R+  EVPEL+++Y 
Sbjct: 335 FSLEKRIIPRCSVFQVLLSKGLIKEGFSLTTVLLPVEKRFLERFVMRYQEEVPELLSVYQ 394

[Close]

BLAST of Sed0011793 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 369.8 bits (948), Expect = 2.7e-102
Identity = 176/333 (52.85%), Postives = 250/333 (75.08%), Query Frame = 0


Query: 41  SFTITYLTETCKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSL 100
           SFT+ YL ++C L P++A   S K+ L S E+P++V+ LL+ HGF+T+Q+S L+ K P L
Sbjct: 69  SFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 128

Query: 101 LHSNVDATILPKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSDA 160
           L +N ++ +LPKL FF SIG+S+  LAR+L  DPTIL RSL NQ++P Y FLKS+L SD 
Sbjct: 129 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 188

Query: 161 KIAAALKRTSRIFL---SKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETV 220
           KI AAL+RT+ +FL   +KNL+PN   + E GVP++ I LL+T FPE +MQK + F+   
Sbjct: 189 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 248

Query: 221 AEIKQIGFDPAKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMI 280
            + +++GF+P KSTFVLA+HA+SG GN+S+W++C++VY+RWGW++++I+ AF+KHPHCM+
Sbjct: 249 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 308

Query: 281 LSEAKISKAMEFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLS 340
           LSE KI++ ME+F  EM +   +IA+ PVVL +S E+RI+PRC V + L   GLVK   S
Sbjct: 309 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 368

Query: 341 LTTVLLPAEKRFLEVFVNRFVGEVPELMNLYLG 371
           LT++L+P EK FLE  V ++  E+PELMNLYLG
Sbjct: 369 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of Sed0011793 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 207.2 bits (526), Expect = 2.3e-53
Identity = 123/336 (36.61%), Postives = 190/336 (56.55%), Query Frame = 0


Query: 34  KFSPEHHSFTITYLTETCKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKL 93
           K  P   SFT++YL ++C L  E+A + S  ++L S +KPDSV+AL K HGF+  Q++ +
Sbjct: 49  KQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSV 108

Query: 94  IPKHPSLLHSNVDATILPKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLK 153
           I   P +L  + +  I PKL FF SIG S  D A+ ++  P +L+ SL  +++P Y  LK
Sbjct: 109 IKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLK 168

Query: 154 SILKSDAKIAAALKRTSRIF---LSKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKL 213
           SIL  +  +   LKR  R F   ++  +    ++ +E GVP +SI  L+   P T   + 
Sbjct: 169 SILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRE 228

Query: 214 NRFEETVAEIKQIGFDPAKSTFVLAMHAISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFR 273
            RF E +  +   GFDP K+ FV AM A     + S   R + +++ +GW+KE+ VAA  
Sbjct: 229 RRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCT-SESAMERKFKLFQCFGWSKEDFVAAIM 288

Query: 274 KHPHCMILSEAKISKAMEFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRALWKKG 333
           + P+C+ +S+ KI   +E+    + L A  I   PVVL  S E+RI PR  VI  L  KG
Sbjct: 289 RFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKG 348

Query: 334 LVKR-GLSLTTVLLPAEKRFLEVFVNRFVGEVPELM 366
           LVK+  ++  T+L      F++ FV ++  E+P+L+
Sbjct: 349 LVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLV 383

[Close]

BLAST of Sed0011793 vs. TAIR 10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-44
Identity = 124/410 (30.24%), Postives = 209/410 (50.98%), Query Frame = 0


Query: 4   IQTFNGGLHFKSNLPPPLRKTPTILRPISSKFSPEHHSFTITYLTETCKLPPETAIATSE 63
           +  F  G  F +        +  I   +SS+   + H+FT++YL ++  L  + A + S 
Sbjct: 24  VNLFQNGSAFSNTF-----SSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESISM 83

Query: 64  KIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSLLHSNVDATILPKLRFFYSIGISR 123
           K+   ++  PDSV++LL+SHGF+ SQ+S +I   P LL  + + ++ PKL+F  SIG S 
Sbjct: 84  KVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASS 143

Query: 124 PDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSD-----AKIAAALKRTSRIFLSKNL 183
            +L  +++  P IL +     +  +Y F+K I+++D      K+  +L   S+    +N 
Sbjct: 144 SELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEADKSSKLEKLCHSLPEGSK---QENK 203

Query: 184 IPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEETVAEIKQIGFDPAKSTFVLAMHA 243
           I N  VL+E GVPQR +  L+      +  K  +F+E++ +  +IGFDP  +TFV A++ 
Sbjct: 204 IRNLLVLREMGVPQRLLFSLLISDAGDVCGK-EKFKESLKKAVEIGFDPTTATFVKALNV 263

Query: 244 ISGDGNRSLWNRCYDVYKRWGWTKEEIVAAFRKHPHCMILSEAKISKAM----------- 303
           + G  ++ + N+ ++  KR G   +++ A F+K P+ +  SE KI  ++           
Sbjct: 264 LYGLSDKGIENK-FNACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRD 323

Query: 304 ------------------------EFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVI 363
                                   EF   EM  P  A+A  P VL YS E+R VPRC VI
Sbjct: 324 EFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVI 383

Query: 364 RALWKKGLVKRGL-SLTTVLLPAEKRFLEVFVNRFVGE--VPELMNLYLG 371
           + L  KGL++  L  +++VL    + FL ++V +   +  V ELM ++ G
Sbjct: 384 KVLISKGLLESELPPISSVLTSTSEVFLYMYVRKHDDKQLVAELMAIFTG 423

[Close]

BLAST of Sed0011793 vs. TAIR 10
Match: AT1G62085.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 163.3 bits (412), Expect = 3.8e-40
Identity = 117/407 (28.75%), Postives = 198/407 (48.65%), Query Frame = 0


Query: 41  SFTITYLTETCKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQLSKLIPKHPSL 100
           SF+++YL ++  LP + A + S+K+    +  PDSV++LL+SHGF+ SQ+S +I  +P L
Sbjct: 55  SFSVSYLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDYPQL 114

Query: 101 LHSNVDATILPKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYTFLKSILKSD- 160
           L ++ + +I PKL+F  S G SR +L   ++  P IL +  +  I  +Y F+K I+++D 
Sbjct: 115 LVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADK 174

Query: 161 ----AKIAAALKRTSRIFLSKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKLNRFEE 220
                K+  +L   S+    +N I N  VL+E GVPQR +  L+    + +  K N FEE
Sbjct: 175 SSKFEKLCHSLPEGSK---QENKIRNVLVLRELGVPQRLLFPLLISDHQPVCGKEN-FEE 234

Query: 221 TVAEIKQIGFDPAKSTFVLAMHAISGDGNR--------------------SLWNRC---- 280
           ++ ++ ++GFDP  S FV A+  +    ++                    +++ +C    
Sbjct: 235 SLKKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFL 294

Query: 281 ------------------------YDVYKRW---------------------GWTKEEIV 340
                                     V K++                     G++++E+ 
Sbjct: 295 NFSENKIVQTWETLKKCGLLEDDVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRDEVA 354

Query: 341 AAFRKHPHCMILSEAKISKAMEFFTAEMELPAAAIARNPVVLLYSFERRIVPRCGVIRAL 371
              ++ P C+ILS   + K  EF   +M  P  A+   P VL YS E+R +PRC VI+AL
Sbjct: 355 MIAKRFPQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKAL 414

[Close]

BLAST of Sed0011793 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 162.9 bits (411), Expect = 5.0e-40
Identity = 112/378 (29.63%), Postives = 187/378 (49.47%), Query Frame = 0


Query: 31  ISSKFSPEHHSFTITYLTETCKLPPETAIATSEKIQLRSREKPDSVIALLKSHGFSTSQL 90
           +S +   + ++FT++YL ++  L  + A + S K+    +  PDSV+ LL SHGF+ SQ+
Sbjct: 42  LSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQI 101

Query: 91  SKLIPKHPSLLHSNVDATILPKLRFFYSIGISRPDLARSLTLDPTILNRSLENQIVPHYT 150
           S +I  +P LL ++ + ++ PKL+F  S G S  ++   ++  P IL +     I  +Y 
Sbjct: 102 STIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYD 161

Query: 151 FLKSILKSDAKIAAALKRTSRIFLSKNLIPNAAVLQEHGVPQRSIALLITQFPETLMQKL 210
           F+K  L   +     L  +      +N I N +VL+E G+P + +  L+    + +  K 
Sbjct: 162 FIKDTLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK- 221

Query: 211 NRFEETVAEIKQIGFDPAKSTFVLAMHAISGDGNRSLWNRC-------YDV------YKR 270
            +FEET+ ++ ++GFDP  S FV A+  I     +++  +        +DV      +K+
Sbjct: 222 EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKK 281

Query: 271 W---------------------GWTKEEIVAAFRKHPHCMILSEAKISKAMEFFTAEMEL 330
           W                     G++++E     +  P C+ LS   + K  EF   +M  
Sbjct: 282 WPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNW 341

Query: 331 PAAAIARNPVVLLYSFERRIVPRCGVIRALWKKGLVKRGLSLTTVLLPAEKRFLEVFVNR 369
           P  A+  NP V  YS E+RIVPR  VI+AL  KGL++  L   + +L   K   +VF+NR
Sbjct: 342 PLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTK---QVFLNR 401

The following BLAST results are available for this feature:

BLAST of Sed0011793 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991835.1	4.5e-136	64.63	uncharacterized protein LOC111488362 [Cucurbita maxima]	[more]
KAG6575851.1	2.3e-135	64.12	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_023549206.1	2.9e-135	64.12	uncharacterized protein LOC111807635 [Cucurbita pepo subsp. pepo]	[more]
KAG7014386.1	1.1e-134	63.89	Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argy...	[more]
XP_022953179.1	2.5e-134	63.87	uncharacterized protein LOC111455797 [Cucurbita moschata]	[more]

BLAST of Sed0011793 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X53	1.4e-07	23.22	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9FM80	1.9e-07	30.28	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9C6A1	4.2e-07	22.46	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of Sed0011793 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JU20	2.2e-136	64.63	uncharacterized protein LOC111488362 OS=Cucurbita maxima OX=3661 GN=LOC111488362...	[more]
A0A6J1GNW6	1.2e-134	63.87	uncharacterized protein LOC111455797 OS=Cucurbita moschata OX=3662 GN=LOC1114557...	[more]
A0A2K1XUZ4	1.2e-113	58.91	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G133200 PE=3 ...	[more]
A0A7N2N432	5.8e-113	60.34	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A0D2MY37	1.9e-111	57.53	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G141300 PE=3 ...	[more]

BLAST of Sed0011793 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	2.7e-102	52.85	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.3e-53	36.61	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	1.5e-44	30.24	Mitochondrial transcription termination factor family protein	[more]
AT1G62085.1	3.8e-40	28.75	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	5.0e-40	29.63	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 266..297 e-value: 0.77 score: 18.8 coord: 91..122 e-value: 0.0016 score: 27.7 coord: 298..332 e-value: 140.0 score: 10.5 coord: 127..158 e-value: 1.7 score: 17.6 coord: 163..191 e-value: 960.0 score: 4.0 coord: 196..226 e-value: 140.0 score: 10.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 184..350 e-value: 3.2E-22 score: 78.9 coord: 78..227 e-value: 3.2E-21 score: 75.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 32..372
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 140..360 e-value: 2.5E-46 score: 160.0
None	No IPR available	PANTHER	PTHR13068:SF133	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 32..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011793.1	Sed0011793.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding