Sed0011756 (gene) Chayote v1

Overview


Name	Sed0011756
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Clathrin light chain
Location	LG10: 1878528 .. 1881080 (-)
RNA-Seq Expression	Sed0011756
Synteny	Sed0011756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAGTAAAGCATATAAAAAGGTCAAAATAGCTTAAAAAAGAGTCATTGCTGTGATTTTCAATTAACTCAGACATTTCTGCGGTGTTGAAGAGCGCAAAAATGTCCTCCTTCGACGCCTACAGTATGGACGGCGAAGACAGCTATGGCGGTTACGGATCCTACACCGATTTCTCCGGCGGCTTCCCCGGCGACGCCGATGTAACCGTCGAGCACACCGCTGCCTCGCCGGACGTCTTCGGATTCGACGATCCGAGCCCTAACTACTCTCAATCTCCGTTCGATCCTCCGATTCATGTTGAGAATGGAAATGGCAACGGAAACGGCTATGGCGCGGCTGAGGAAGAAGTTGGCGACGGCGTTTTCGTTTCGGATGGTCCGATTCTTCCGCCTCCGAGCATGATGGGCGTCGAGGAAGGATATGCTCTTCGTGAATGGCGTCGGTAAGGTCTTTTGAACCTCAATTTTGTCTTGGATTTCTTGGAGCTGAAGAGTTTTGTCTTGTGTTGCCGGTGCTTTGTATCTCGATCTGATTCTTTGGTGAACAATTCCAGATCTCTACTAATTTCGTCTCATTTTAGTGTTTATACTGGATAACACTGATTGATCCGGACGATTTTTCCATTCTGTTTTATTGGAGTTATTACTTATTTGATGAGAGAAATTATATTGATCGATTTGCATTAAAAGGTGGTGAATTAAAGAACTTAGATCTACGGACATCTGTACCTTAACTAGTACAGTTAGATGAAGAAGCTTCCTCTTTAGTAAGTTCTGGTCGAGGTTTGTATTAGTAAATCTTCCATGAACAAGCCATTGAGTCAAATTTTTAATCATCAGTGTGAGGAAGTTCAAGTGAAATTTAGGTAAAGCTCTGGAAGTTCAAGCGGAATTCCAGCGAGGGTATTTGTAGATCAGTCGGGGACATAGCCATTTAAGGAAAAAATTACTAATTATCAGTGGGTGTATATTGTTATAATCTATGTAACAATTCAAGGGGAATTCAGGAAAATGAAAATCTCTGTTAAGATAAATTTGGATGATTTGGCTTAACAGCGATCTATATTATGAAATTTTTAGGAGTAGTTTTGTTTAGGATAGAACAATTACAAAAATTTTGAGTGATTCCTCAAATTGCATGAAGTGTAAGTCTATTCAATTGAAATCTTTGGAACTCTCTATTTCTTTCTCTCTGATGTTTAGATGTTGTATTAGGTGTAACAAAATGCCCTTGTTATTTATCTCTTTCCCTTAGATCGCAGAGAGTGAAATATGTATTTGATGGCCAATTTGAGTTCTGAAGATTATTTCTAGTACACATCGATTTGCCTTTCCAATTATAACTTAAGAAATTATGGGTTCTGCTGGTGCAGCCAAAATGCCATTCAGCTTGAAGAGAAGGAGAAAAGGGAGAAAGAATTGAGGATCAAAATCATTGAAGAAGCTGAGGAGTATAAAGTAGCTTTCTATGAGAAAAGAAAGCTTAATGTTGAGAGTAATAAGGCTAACAACAGAGAAAGTGAGAAGGTACAGTTTAGTTTGTCATTTATAGAGCCAGTGTTCATTTTCTTCTCTAGATCTGTTTTATTAGTATAATTTTTTGTTTTTGGAGCAGTTATATTTGGCAAATCAGGAGAAGTTTCATAAAGAGGCTGATAAACAATACTGGAAAGCAATTGCTGAACTAATTCCCAATGAAATTCCTAATATTGAGAAAAAGAGAGGTAAGAAGGATCAAGAAAACAAACCATCTATCGTAGTTGTTCAAGGTCCGAAGCCCGGGAAACCTACCGATCTTTCAAGAATGCGACAAATTCTCGTGAAATTGAAACACACACCCCCACCTCATATGAAACCGCCTCCACCCCCACCTGCCAAGGATGCCAAAGATGCTAAGGATGCCAAAGAAGCAAAGGATGGAAAAGATGCGAAAAATGCAAAGGACCCGAACAATGAAAAAGATGCAGCAACGAAAGCATCTGATCCTTCAACTGAAGCTGCCACTGCCAATGGCACTTCTCACAAACCTCAAGAAGAAGCTGCTGCTGCTGCTGAGGAATAATTTGCCACATAATGACATAGCGATAGCCCGTATCAAGTTCGTTCTGCTCTATACTTTATACTTTTTCGGGAGTTTTCATTGTTTTCGCTTGTTTATCTTGCATTTGAATCTGTAATCATTTGTGATCTTATACAACATTTATTCTTCAGTATCTTATGAAAGTCTCTCGTGACACTATCTTTTGGACTCGTTGAAGTTCTGATTTTGACATTGCTGCCCTCTTCAAACATCTTTGAAATCATTTCTTCAGGTTAGCCCATTCATTTTCTAAGCCACCTTTCTCTACGGTAGAGGTTTGCATCTGTAATCATATGATTTATTTATTTATTTATTTTTTCTCGAGAACTTGAGAATTTCCTTCAGATTGTTGGTATGATTGTTGTGATTTCTGTTTGTGCTGTAGTTAATTTCTTATTCTCAAGACTGACTTTCGAAATAATATGTTCTTGTTAATTACTTTATTGATTTTTTACCATTTCATTACTTTTAGG

mRNA sequence

AAAAGAGTAAAGCATATAAAAAGGTCAAAATAGCTTAAAAAAGAGTCATTGCTGTGATTTTCAATTAACTCAGACATTTCTGCGGTGTTGAAGAGCGCAAAAATGTCCTCCTTCGACGCCTACAGTATGGACGGCGAAGACAGCTATGGCGGTTACGGATCCTACACCGATTTCTCCGGCGGCTTCCCCGGCGACGCCGATGTAACCGTCGAGCACACCGCTGCCTCGCCGGACGTCTTCGGATTCGACGATCCGAGCCCTAACTACTCTCAATCTCCGTTCGATCCTCCGATTCATGTTGAGAATGGAAATGGCAACGGAAACGGCTATGGCGCGGCTGAGGAAGAAGTTGGCGACGGCGTTTTCGTTTCGGATGGTCCGATTCTTCCGCCTCCGAGCATGATGGGCGTCGAGGAAGGATATGCTCTTCGTGAATGGCGTCGCCAAAATGCCATTCAGCTTGAAGAGAAGGAGAAAAGGGAGAAAGAATTGAGGATCAAAATCATTGAAGAAGCTGAGGAGTATAAAGTAGCTTTCTATGAGAAAAGAAAGCTTAATGTTGAGAGTAATAAGGCTAACAACAGAGAAAGTGAGAAGTTATATTTGGCAAATCAGGAGAAGTTTCATAAAGAGGCTGATAAACAATACTGGAAAGCAATTGCTGAACTAATTCCCAATGAAATTCCTAATATTGAGAAAAAGAGAGGTAAGAAGGATCAAGAAAACAAACCATCTATCGTAGTTGTTCAAGGTCCGAAGCCCGGGAAACCTACCGATCTTTCAAGAATGCGACAAATTCTCGTGAAATTGAAACACACACCCCCACCTCATATGAAACCGCCTCCACCCCCACCTGCCAAGGATGCCAAAGATGCTAAGGATGCCAAAGAAGCAAAGGATGGAAAAGATGCGAAAAATGCAAAGGACCCGAACAATGAAAAAGATGCAGCAACGAAAGCATCTGATCCTTCAACTGAAGCTGCCACTGCCAATGGCACTTCTCACAAACCTCAAGAAGAAGCTGCTGCTGCTGCTGAGGAATAATTTGCCACATAATGACATAGCGATAGCCCGTATCAATATCTTATGAAAGTCTCTCGTGACACTATCTTTTGGACTCGTTGAAGTTCTGATTTTGACATTGCTGCCCTCTTCAAACATCTTTGAAATCATTTCTTCAGGTTAGCCCATTCATTTTCTAAGCCACCTTTCTCTACGGTAGAGGTTTGCATCTGTAATCATATGATTTATTTATTTATTTATTTTTTCTCGAGAACTTGAGAATTTCCTTCAGATTGTTGGTATGATTGTTGTGATTTCTGTTTGTGCTGTAGTTAATTTCTTATTCTCAAGACTGACTTTCGAAATAATATGTTCTTGTTAATTACTTTATTGATTTTTTACCATTTCATTACTTTTAGG

Coding sequence (CDS)

ATGTCCTCCTTCGACGCCTACAGTATGGACGGCGAAGACAGCTATGGCGGTTACGGATCCTACACCGATTTCTCCGGCGGCTTCCCCGGCGACGCCGATGTAACCGTCGAGCACACCGCTGCCTCGCCGGACGTCTTCGGATTCGACGATCCGAGCCCTAACTACTCTCAATCTCCGTTCGATCCTCCGATTCATGTTGAGAATGGAAATGGCAACGGAAACGGCTATGGCGCGGCTGAGGAAGAAGTTGGCGACGGCGTTTTCGTTTCGGATGGTCCGATTCTTCCGCCTCCGAGCATGATGGGCGTCGAGGAAGGATATGCTCTTCGTGAATGGCGTCGCCAAAATGCCATTCAGCTTGAAGAGAAGGAGAAAAGGGAGAAAGAATTGAGGATCAAAATCATTGAAGAAGCTGAGGAGTATAAAGTAGCTTTCTATGAGAAAAGAAAGCTTAATGTTGAGAGTAATAAGGCTAACAACAGAGAAAGTGAGAAGTTATATTTGGCAAATCAGGAGAAGTTTCATAAAGAGGCTGATAAACAATACTGGAAAGCAATTGCTGAACTAATTCCCAATGAAATTCCTAATATTGAGAAAAAGAGAGGTAAGAAGGATCAAGAAAACAAACCATCTATCGTAGTTGTTCAAGGTCCGAAGCCCGGGAAACCTACCGATCTTTCAAGAATGCGACAAATTCTCGTGAAATTGAAACACACACCCCCACCTCATATGAAACCGCCTCCACCCCCACCTGCCAAGGATGCCAAAGATGCTAAGGATGCCAAAGAAGCAAAGGATGGAAAAGATGCGAAAAATGCAAAGGACCCGAACAATGAAAAAGATGCAGCAACGAAAGCATCTGATCCTTCAACTGAAGCTGCCACTGCCAATGGCACTTCTCACAAACCTCAAGAAGAAGCTGCTGCTGCTGCTGAGGAATAA

Protein sequence

MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPFDPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQLEEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADKQYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTSHKPQEEAAAAAEE

Homology

[Close]

BLAST of Sed0011756 vs. NCBI nr
Match: XP_008439880.1 (PREDICTED: clathrin light chain 1-like [Cucumis melo] >KAA0052700.1 clathrin light chain 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 519.6 bits (1337), Expect = 1.8e-143
Identity = 279/313 (89.14%), Postives = 288/313 (92.01%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MS+FDAYSMDGEDSYGGYGSYT+FSG FPGDADVTVEHT ASPDVFGFDDPSPNYSQ+PF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYGAAE+EVGDGVFVSDGPILPPPS MGVEEGYALREWRRQNAIQL
Sbjct: 61  D-PIHVE--NGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLYLANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQE KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKD K+AKDGKDAK      NEKDAATKASDP   AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKDGKDAKDGKDAK------NEKDAATKASDPVPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQE   A A +
Sbjct: 301 HKPQEPTVAPAAD 304

[Close]

BLAST of Sed0011756 vs. NCBI nr
Match: XP_004134715.1 (clathrin light chain 1 [Cucumis sativus] >KGN49213.1 hypothetical protein Csa_003426 [Cucumis sativus])

HSP 1 Score: 519.6 bits (1337), Expect = 1.8e-143
Identity = 278/313 (88.82%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MS+FDAYSMDGEDSYGGYGSYT+FSG FPGDADVTVEHT ASPDVFGFDDPSPNYSQ+PF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYGAAE+EVGDGVF SDGPILPPPS MGVEEGYALREWRRQNAIQL
Sbjct: 61  D-PIHVE--NGNGNGYGAAEDEVGDGVFASDGPILPPPSEMGVEEGYALREWRRQNAIQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLYLANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQE KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKD    KDGKDAK+ KD  NEKDAATKASDP+  AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKD---TKDGKDAKDGKDAKNEKDAATKASDPTPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQE + A A +
Sbjct: 301 HKPQEPSVAPAAD 307

[Close]

BLAST of Sed0011756 vs. NCBI nr
Match: XP_022926755.1 (clathrin light chain 1-like [Cucurbita moschata] >KAG7026582.1 Clathrin light chain 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 518.8 bits (1335), Expect = 3.1e-143
Identity = 277/313 (88.50%), Postives = 290/313 (92.65%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MSSFDAYSMDGED+YGGYGSYT+FSGGFPGDADV+VEHTAASPDVFGFDDP  NYSQ+PF
Sbjct: 1   MSSFDAYSMDGEDAYGGYGSYTNFSGGFPGDADVSVEHTAASPDVFGFDDPGTNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYG  E+EVGDGVFVSDGPILPPP+ MGVEEGYALREWRRQNA+QL
Sbjct: 61  D-PIHVE--NGNGNGYGVVEDEVGDGVFVSDGPILPPPTEMGVEEGYALREWRRQNALQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLY ANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYSANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQ+ KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQDKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKDAK+AKDGKDAK      NEKDAATKASDP+  AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKDAKDAKDGKDAK------NEKDAATKASDPAPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQEE AAAA E
Sbjct: 301 HKPQEETAAAAAE 304

[Close]

BLAST of Sed0011756 vs. NCBI nr
Match: TYK13124.1 (clathrin light chain 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 518.8 bits (1335), Expect = 3.1e-143
Identity = 279/313 (89.14%), Postives = 288/313 (92.01%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MS+FDAYSMDGEDSYGGYGSYT+FSG FPGDADVTVEHT ASPDVFGFDDPSPNYSQ+PF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGTFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYGAAE+EVGDGVFVSDGPILPPPS MGVEEGYALREWRRQNAIQL
Sbjct: 61  D-PIHVE--NGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLYLANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQE KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKD K+AKDGKDAK      NEKDAATKASDP   AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKDGKDAKDGKDAK------NEKDAATKASDPVPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQE   A A +
Sbjct: 301 HKPQEPTVAPAAD 304

[Close]

BLAST of Sed0011756 vs. NCBI nr
Match: XP_038882943.1 (clathrin light chain 1-like [Benincasa hispida])

HSP 1 Score: 515.0 bits (1325), Expect = 4.5e-142
Identity = 275/313 (87.86%), Postives = 290/313 (92.65%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MS+FDAYS+DGEDSYGGYGSY++FSG FPGDADV+VEHT ASPDVFGFDDPSPNYSQ+PF
Sbjct: 1   MSTFDAYSIDGEDSYGGYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYGAAE+E+GDGVFVSDGPILPPPS MGVEEGYALREWRRQNAIQL
Sbjct: 61  D-PIHVE--NGNGNGYGAAEDELGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLYLANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQ+ KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQDKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKD   AKDGKDAK+ KD   EKDAATKASDP+  AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKD---AKDGKDAKDGKDAKKEKDAATKASDPAPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQE  AA A +
Sbjct: 301 HKPQEAPAAPAAD 307

[Close]

BLAST of Sed0011756 vs. ExPASy Swiss-Prot
Match: Q9SKU1 (Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-72
Identity = 174/336 (51.79%), Postives = 216/336 (64.29%), Query Frame = 0


Query: 1   MSSFD-------AYSMDGEDSYGGYGSYTDF--------SGGFPGDADVTVEHTAASPDV 60
           M++FD        +S    + +GGY ++++         SGGF      +     ASP+ 
Sbjct: 1   MATFDDGDFPAQTHSPSEHEDFGGYDNFSEAQQPPTQHQSGGFS-----SFNGDPASPNG 60

Query: 61  FGFDDPSPNYS-QSPFDPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVE 120
           +GF   SPN+   SPF+  ++  NGNG G+G        GD +F SDGPILP P+ M  E
Sbjct: 61  YGFGASSPNHDFSSPFESSVNDANGNGGGSG--------GDAIFASDGPILPDPNEMR-E 120

Query: 121 EGYALREWRRQNAIQLEEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESE 180
           EG+  REWRR N I LEEKEK+EKE+R +II EAE++K AFYEKR   +E+NK +NRE E
Sbjct: 121 EGFQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKE 180

Query: 181 KLYLANQEKFHKEADKQYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPT 240
           KLY ANQEKFHKE DK YWKAIAELIP E+PNIEKKRGKKD + KPS+ V+QGPKPGKPT
Sbjct: 181 KLYWANQEKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPT 240

Query: 241 DLSRMRQILVKLKHTPPPHMKPPPPP-----PAKDAKDAKDAKEAKDGKDAKNAKDPNNE 300
           DL RMRQI +KLK  PPPHM PPPPP       KDAKD KDAK  KDGKDAK  KD  + 
Sbjct: 241 DLGRMRQIFLKLKTNPPPHMMPPPPPAKDAKDGKDAKDGKDAKTGKDGKDAKGGKDAKDL 300

Query: 301 KD---AATKASDPSTEAATANGTSHKPQEEAAAAAE 313
           KD   A  K ++    +   + +    + +AAA+ E
Sbjct: 301 KDGKPADPKVTEEKRPSPAKDASVETAKPDAAASGE 322

[Close]

BLAST of Sed0011756 vs. ExPASy Swiss-Prot
Match: Q7XKE9 (Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.1e-61
Identity = 158/297 (53.20%), Postives = 185/297 (62.29%), Query Frame = 0


Query: 17  GYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPFDPPIHVENGNGNGNGY 76
           GYG Y  F  G   D +   E  A   +       S  +S SPF P   ++ G       
Sbjct: 41  GYGGYASFVDGGVEDVEEEEEEIAVESEGVPIGHVSGGFSPSPFSPDPELDGG------- 100

Query: 77  GAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQLEEKEKREKELRIKIIE 136
                         DGPILPPP+ MG EEG  LREWRRQNAI LEEKE++EKELR +I+ 
Sbjct: 101 --------------DGPILPPPAQMGAEEGILLREWRRQNAIVLEEKERKEKELRAQILA 160

Query: 137 EAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADKQYWKAIAELIPNEIPN 196
           EAEE+K AFYEKR  N E+NK +NRE EK+++A QEKFH EADKQYWK+I+ELIP+EI  
Sbjct: 161 EAEEFKKAFYEKRIQNCETNKVHNREREKIFVAGQEKFHAEADKQYWKSISELIPHEIAT 220

Query: 197 IEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAK 256
           IE KRGKKD++ KPSI V+QGPKPGKPTDLSRMRQILVKLKH PPPHM    PPPA  AK
Sbjct: 221 IE-KRGKKDKDKKPSITVIQGPKPGKPTDLSRMRQILVKLKHAPPPHMM--QPPPASAAK 280

Query: 257 D-AKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTSHKPQEEAAAAAE 313
           D AKD   AKDG  A      N  K  A     P      ANG+  + ++E  AA+E
Sbjct: 281 DGAKDG--AKDGTPA----PANGTKKPAESKEKP------ANGSPAEAEKEQPAASE 301

[Close]

BLAST of Sed0011756 vs. ExPASy Swiss-Prot
Match: Q5Z402 (Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.3e-61
Identity = 152/272 (55.88%), Postives = 182/272 (66.91%), Query Frame = 0


Query: 42  SPDVFGFDDPSPNYSQSPFDPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMM 101
           SP+ + F   +P    SPF  P    NG+ + + + A + +        +GP+LPPP+ M
Sbjct: 41  SPEPYAFRPDAP----SPFGMP--EANGSLHDDPFAAPDND--------NGPVLPPPNQM 100

Query: 102 GVEEGYALREWRRQNAIQLEEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNR 161
           G +EG+ LREWRRQNAI LEEKEK+EKE+R +II +A+E+K AF EKRKLNVE++K  NR
Sbjct: 101 GADEGFLLREWRRQNAILLEEKEKKEKEMRNQIILDAKEFKKAFVEKRKLNVETSKDQNR 160

Query: 162 ESEKLYLANQEKFHKEADKQYWKAIAELIPNEIPNIEKKRGK--KDQENKPSIVVVQGPK 221
           E EKLYLANQEKFH  ADKQYWKAI+ELIP+EI NIEK+  K  KD+E KP IVV+QGPK
Sbjct: 161 EREKLYLANQEKFHAGADKQYWKAISELIPHEIANIEKRGAKKDKDKEKKPGIVVIQGPK 220

Query: 222 PGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNE 281
           PGKPTD+SRMRQIL+KLKHTPPPHMKPPPPP    A   KD    KDG     A      
Sbjct: 221 PGKPTDMSRMRQILLKLKHTPPPHMKPPPPPA---AATGKDGAAGKDGAKVAAAA----S 280

Query: 282 KDAATKASDPSTEAATANGTSHKPQEEAAAAA 312
           KDA+   S P  E A A         E  AAA
Sbjct: 281 KDASANGSVPEMEKAAAAAAPAAAATEPIAAA 291

[Close]

BLAST of Sed0011756 vs. ExPASy Swiss-Prot
Match: O04209 (Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.1e-57
Identity = 135/240 (56.25%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 28  FPGDADVTVEHTAA-SPDVFGFDDPSPNYSQSPFDPPIHVENGNGN-----GNGYGAAEE 87
           F  D+ V +   A+ S  V G  D + ++  S FD  + VE+   +      + YGA   
Sbjct: 4   FEDDSFVILNDDASESVPVSGSFDATDSF--SAFDGSLQVEDSVDDVFAAPSSDYGAYSN 63

Query: 88  EVGDGVFVS----DGPILPPPSMMGVEEGYALREWRRQNAIQLEEKEKREKELRIKIIEE 147
             GDG+F S    DGPILPPPS M  +EG+ALREWRRQNAIQLEEKEKREKEL  +IIEE
Sbjct: 64  --GDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIEE 123

Query: 148 AEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADKQYWKAIAELIPNEIPNI 207
           A++YK  F++K ++  E+NKA NRE EKLYL NQEKF+ E+ K YWKAIAEL+P E+P I
Sbjct: 124 ADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEVPTI 183

Query: 208 EKKRGKKDQEN--KPSIVVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDA 256
           EK+RGKK+Q++  KP++ V+QGPKPGKPTDL+RMRQILVKLKH PP H+K    PP+++A
Sbjct: 184 EKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQPPSEEA 239

[Close]

BLAST of Sed0011756 vs. ExPASy Swiss-Prot
Match: Q6Z3A8 (Clathrin light chain 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0461500 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 7.7e-52
Identity = 147/300 (49.00%), Postives = 186/300 (62.00%), Query Frame = 0


Query: 27  GFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPFDPPIHVENGNGNGNGYGAAEEEVGDG 86
           G+ G  DV   H     DV G                + V +G G  +   A     GDG
Sbjct: 91  GYGGSGDVMNGHVDQIGDVMG--------------GGVVVGDGGGIDDDLFAG---AGDG 150

Query: 87  VFVSDGPILPPPSMMGVEEGYALREWRRQNAIQLEEKEKREKELRIKIIEEAEEYKVAFY 146
               DGP+LPPP  M  EEG   REWRRQNA+ LEEKE++E+E R +II EA+E+K +F 
Sbjct: 151 ---DDGPVLPPPEAM-KEEGILRREWRRQNALMLEEKERKERERRGEIIAEADEFKRSFA 210

Query: 147 EKRKLNVESNKANNRESEKLYLANQEKFHKEADKQYWKAIAELIPNEIPNIEKKRGKKDQ 206
           EKRKLN ++N+A NR+ EKL+LA QEKFH EA+KQYWKAIAE++P+EIP +EK+  ++++
Sbjct: 211 EKRKLNGDTNRAQNRDREKLFLAKQEKFHGEAEKQYWKAIAEMVPHEIPGLEKRGKRREK 270

Query: 207 EN--------KPSIVVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDA 266
           ++        +P +VVVQG KPGKPTDLSRMRQ+L+KLK TPPPHM PPPP PAKD    
Sbjct: 271 QSAEANAKAKQPGVVVVQGTKPGKPTDLSRMRQVLMKLKQTPPPHMAPPPPQPAKDTGGD 330

Query: 267 KDAKEAKDGKDAKNA-----KDPNNEKDAATKASDPSTEAATANGTSHKPQEEAAAAAEE 314
            DA   KDG+  K A     K    EK+AA  A  P T AA A+  ++K      AAAEE
Sbjct: 331 TDAN--KDGEAEKAAGEIEKKAAGGEKEAA--AGPPVTAAAAADAQANK------AAAEE 359

[Close]

BLAST of Sed0011756 vs. ExPASy TrEMBL
Match: A0A5A7UC02 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003130 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 8.9e-144
Identity = 279/313 (89.14%), Postives = 288/313 (92.01%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MS+FDAYSMDGEDSYGGYGSYT+FSG FPGDADVTVEHT ASPDVFGFDDPSPNYSQ+PF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYGAAE+EVGDGVFVSDGPILPPPS MGVEEGYALREWRRQNAIQL
Sbjct: 61  D-PIHVE--NGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLYLANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQE KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKD K+AKDGKDAK      NEKDAATKASDP   AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKDGKDAKDGKDAK------NEKDAATKASDPVPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQE   A A +
Sbjct: 301 HKPQEPTVAPAAD 304

[Close]

BLAST of Sed0011756 vs. ExPASy TrEMBL
Match: A0A0A0KI18 (Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_6G517210 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 8.9e-144
Identity = 278/313 (88.82%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MS+FDAYSMDGEDSYGGYGSYT+FSG FPGDADVTVEHT ASPDVFGFDDPSPNYSQ+PF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYGAAE+EVGDGVF SDGPILPPPS MGVEEGYALREWRRQNAIQL
Sbjct: 61  D-PIHVE--NGNGNGYGAAEDEVGDGVFASDGPILPPPSEMGVEEGYALREWRRQNAIQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLYLANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQE KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKD    KDGKDAK+ KD  NEKDAATKASDP+  AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKD---TKDGKDAKDGKDAKNEKDAATKASDPTPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQE + A A +
Sbjct: 301 HKPQEPSVAPAAD 307

[Close]

BLAST of Sed0011756 vs. ExPASy TrEMBL
Match: A0A1S3B0F4 (Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103484535 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 8.9e-144
Identity = 279/313 (89.14%), Postives = 288/313 (92.01%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MS+FDAYSMDGEDSYGGYGSYT+FSG FPGDADVTVEHT ASPDVFGFDDPSPNYSQ+PF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYGAAE+EVGDGVFVSDGPILPPPS MGVEEGYALREWRRQNAIQL
Sbjct: 61  D-PIHVE--NGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLYLANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQE KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKD K+AKDGKDAK      NEKDAATKASDP   AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKDGKDAKDGKDAK------NEKDAATKASDPVPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQE   A A +
Sbjct: 301 HKPQEPTVAPAAD 304

[Close]

BLAST of Sed0011756 vs. ExPASy TrEMBL
Match: A0A5D3CQ24 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007340 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.5e-143
Identity = 279/313 (89.14%), Postives = 288/313 (92.01%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MS+FDAYSMDGEDSYGGYGSYT+FSG FPGDADVTVEHT ASPDVFGFDDPSPNYSQ+PF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGTFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYGAAE+EVGDGVFVSDGPILPPPS MGVEEGYALREWRRQNAIQL
Sbjct: 61  D-PIHVE--NGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLYLANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQE KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKD K+AKDGKDAK      NEKDAATKASDP   AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKDGKDAKDGKDAK------NEKDAATKASDPVPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQE   A A +
Sbjct: 301 HKPQEPTVAPAAD 304

[Close]

BLAST of Sed0011756 vs. ExPASy TrEMBL
Match: A0A6J1EM09 (Clathrin light chain OS=Cucurbita moschata OX=3662 GN=LOC111433782 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.5e-143
Identity = 277/313 (88.50%), Postives = 290/313 (92.65%), Query Frame = 0


Query: 1   MSSFDAYSMDGEDSYGGYGSYTDFSGGFPGDADVTVEHTAASPDVFGFDDPSPNYSQSPF 60
           MSSFDAYSMDGED+YGGYGSYT+FSGGFPGDADV+VEHTAASPDVFGFDDP  NYSQ+PF
Sbjct: 1   MSSFDAYSMDGEDAYGGYGSYTNFSGGFPGDADVSVEHTAASPDVFGFDDPGTNYSQAPF 60

Query: 61  DPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVEEGYALREWRRQNAIQL 120
           D PIHVE  NGNGNGYG  E+EVGDGVFVSDGPILPPP+ MGVEEGYALREWRRQNA+QL
Sbjct: 61  D-PIHVE--NGNGNGYGVVEDEVGDGVFVSDGPILPPPTEMGVEEGYALREWRRQNALQL 120

Query: 121 EEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADK 180
           EEKEKREKELRIKIIEEAEEYK+ FYEKRKLNVESNK NNRE EKLY ANQEKFHKEADK
Sbjct: 121 EEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYSANQEKFHKEADK 180

Query: 181 QYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPTDLSRMRQILVKLKHTP 240
           QYWKAIAELIPNE+PNIEKKRGKKDQ+ KPSI+VVQGPKPGKPTDLSRMRQILVKLKHTP
Sbjct: 181 QYWKAIAELIPNEVPNIEKKRGKKDQDKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTP 240

Query: 241 PPHMKPPPPPPAKDAKDAKDAKEAKDGKDAKNAKDPNNEKDAATKASDPSTEAATANGTS 300
           PPHMKPPPPPPAKDAKDAKDAK+AKDGKDAK      NEKDAATKASDP+  AATANGTS
Sbjct: 241 PPHMKPPPPPPAKDAKDAKDAKDAKDGKDAK------NEKDAATKASDPAPGAATANGTS 300

Query: 301 HKPQEEAAAAAEE 314
           HKPQEE AAAA E
Sbjct: 301 HKPQEETAAAAAE 304

[Close]

BLAST of Sed0011756 vs. TAIR 10
Match: AT2G20760.1 (Clathrin light chain protein )

HSP 1 Score: 273.5 bits (698), Expect = 2.1e-73
Identity = 174/336 (51.79%), Postives = 216/336 (64.29%), Query Frame = 0


Query: 1   MSSFD-------AYSMDGEDSYGGYGSYTDF--------SGGFPGDADVTVEHTAASPDV 60
           M++FD        +S    + +GGY ++++         SGGF      +     ASP+ 
Sbjct: 1   MATFDDGDFPAQTHSPSEHEDFGGYDNFSEAQQPPTQHQSGGFS-----SFNGDPASPNG 60

Query: 61  FGFDDPSPNYS-QSPFDPPIHVENGNGNGNGYGAAEEEVGDGVFVSDGPILPPPSMMGVE 120
           +GF   SPN+   SPF+  ++  NGNG G+G        GD +F SDGPILP P+ M  E
Sbjct: 61  YGFGASSPNHDFSSPFESSVNDANGNGGGSG--------GDAIFASDGPILPDPNEMR-E 120

Query: 121 EGYALREWRRQNAIQLEEKEKREKELRIKIIEEAEEYKVAFYEKRKLNVESNKANNRESE 180
           EG+  REWRR N I LEEKEK+EKE+R +II EAE++K AFYEKR   +E+NK +NRE E
Sbjct: 121 EGFQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKE 180

Query: 181 KLYLANQEKFHKEADKQYWKAIAELIPNEIPNIEKKRGKKDQENKPSIVVVQGPKPGKPT 240
           KLY ANQEKFHKE DK YWKAIAELIP E+PNIEKKRGKKD + KPS+ V+QGPKPGKPT
Sbjct: 181 KLYWANQEKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPT 240

Query: 241 DLSRMRQILVKLKHTPPPHMKPPPPP-----PAKDAKDAKDAKEAKDGKDAKNAKDPNNE 300
           DL RMRQI +KLK  PPPHM PPPPP       KDAKD KDAK  KDGKDAK  KD  + 
Sbjct: 241 DLGRMRQIFLKLKTNPPPHMMPPPPPAKDAKDGKDAKDGKDAKTGKDGKDAKGGKDAKDL 300

Query: 301 KD---AATKASDPSTEAATANGTSHKPQEEAAAAAE 313
           KD   A  K ++    +   + +    + +AAA+ E
Sbjct: 301 KDGKPADPKVTEEKRPSPAKDASVETAKPDAAASGE 322

[Close]

BLAST of Sed0011756 vs. TAIR 10
Match: AT2G40060.1 (Clathrin light chain protein )

HSP 1 Score: 222.6 bits (566), Expect = 4.3e-58
Identity = 135/240 (56.25%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 28  FPGDADVTVEHTAA-SPDVFGFDDPSPNYSQSPFDPPIHVENGNGN-----GNGYGAAEE 87
           F  D+ V +   A+ S  V G  D + ++  S FD  + VE+   +      + YGA   
Sbjct: 4   FEDDSFVILNDDASESVPVSGSFDATDSF--SAFDGSLQVEDSVDDVFAAPSSDYGAYSN 63

Query: 88  EVGDGVFVS----DGPILPPPSMMGVEEGYALREWRRQNAIQLEEKEKREKELRIKIIEE 147
             GDG+F S    DGPILPPPS M  +EG+ALREWRRQNAIQLEEKEKREKEL  +IIEE
Sbjct: 64  --GDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIEE 123

Query: 148 AEEYKVAFYEKRKLNVESNKANNRESEKLYLANQEKFHKEADKQYWKAIAELIPNEIPNI 207
           A++YK  F++K ++  E+NKA NRE EKLYL NQEKF+ E+ K YWKAIAEL+P E+P I
Sbjct: 124 ADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEVPTI 183

Query: 208 EKKRGKKDQEN--KPSIVVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDA 256
           EK+RGKK+Q++  KP++ V+QGPKPGKPTDL+RMRQILVKLKH PP H+K    PP+++A
Sbjct: 184 EKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQPPSEEA 239

[Close]

BLAST of Sed0011756 vs. TAIR 10
Match: AT3G51890.1 (Clathrin light chain protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48
Identity = 102/159 (64.15%), Postives = 120/159 (75.47%), Query Frame = 0


Query: 94  ILPPPSMMGVEEGYALREWRRQNAIQLEEKEKREKELRIKIIEEAEEYKVAFYEKRKLNV 153
           ILPPPS M  EEG+ALREWRR NA++LEEKEK EKE+  +I+E AE+YK  FY KR + +
Sbjct: 85  ILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFYSKRNVTI 144

Query: 154 ESNKANNRESEKLYLANQEKFHKEADKQYWKAIAELIPNEIPNIEKKRGKKDQENKPSIV 213
           E+NK  NRE EK +L NQEKF+ EADK  WKAIAELIP E+P IE +  KK      +I 
Sbjct: 145 ENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPVIENRGNKK---KTATIT 204

Query: 214 VVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPA 253
           V+QGPKPGKPTDLSRMRQ+L KLKH PP HMKP  P P+
Sbjct: 205 VIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLPSPS 240

The following BLAST results are available for this feature:

BLAST of Sed0011756 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439880.1	1.8e-143	89.14	PREDICTED: clathrin light chain 1-like [Cucumis melo] >KAA0052700.1 clathrin lig...	[more]
XP_004134715.1	1.8e-143	88.82	clathrin light chain 1 [Cucumis sativus] >KGN49213.1 hypothetical protein Csa_00...	[more]
XP_022926755.1	3.1e-143	88.50	clathrin light chain 1-like [Cucurbita moschata] >KAG7026582.1 Clathrin light ch...	[more]
TYK13124.1	3.1e-143	89.14	clathrin light chain 1-like [Cucumis melo var. makuwa]	[more]
XP_038882943.1	4.5e-142	87.86	clathrin light chain 1-like [Benincasa hispida]	[more]

BLAST of Sed0011756 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKU1	3.0e-72	51.79	Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1	[more]
Q7XKE9	1.1e-61	53.20	Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 ...	[more]
Q5Z402	5.3e-61	55.88	Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 ...	[more]
O04209	6.1e-57	56.25	Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1	[more]
Q6Z3A8	7.7e-52	49.00	Clathrin light chain 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0461500 ...	[more]

BLAST of Sed0011756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UC02	8.9e-144	89.14	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120...	[more]
A0A0A0KI18	8.9e-144	88.82	Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_6G517210 PE=3 SV=1	[more]
A0A1S3B0F4	8.9e-144	89.14	Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103484535 PE=3 SV=1	[more]
A0A5D3CQ24	1.5e-143	89.14	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255...	[more]
A0A6J1EM09	1.5e-143	88.50	Clathrin light chain OS=Cucurbita moschata OX=3662 GN=LOC111433782 PE=3 SV=1	[more]

BLAST of Sed0011756 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20760.1	2.1e-73	51.79	Clathrin light chain protein	[more]
AT2G40060.1	4.3e-58	56.25	Clathrin light chain protein	[more]
AT3G51890.1	1.8e-48	64.15	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..302
None	No IPR available	PANTHER	PTHR10639:SF32	CLATHRIN LIGHT CHAIN	coord: 8..312
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 104..239 e-value: 1.1E-7 score: 32.1
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 8..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011756.1	Sed0011756.1	mRNA
Sed0011756.2	Sed0011756.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048268	clathrin coat assembly
biological_process	GO:0072583	clathrin-dependent endocytosis
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
molecular_function	GO:0032050	clathrin heavy chain binding
molecular_function	GO:0005198	structural molecule activity