Sed0011726 (gene) Chayote v1

Overview


Name	Sed0011726
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WUSCHEL-related homeobox 2-like
Location	LG13: 19254980 .. 19256494 (-)
RNA-Seq Expression	Sed0011726
Synteny	Sed0011726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGCACGGCGGAGAGGGGCGGCGGTCCGGCGAGCTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATTTTGGAGAATTTGTACAAACAAGGAGTGCGAACGCCGAGTGCTGACCAAATCCAACAGATTACGAGCCGGCTAAAGGGTTACGGCCATATTGAAGGCAAAAATGTGTTTTATTGGTTTCAAAATCACAAAGCTAGGCAAAGGCAGAAGCAAAAGCAAGATAGTGCAACTTTGGCTTTTTTTAATCACTTTCTGACCTTTAATAACCCTTCTCCTCATTCCCCCAATGGTTCGTCTTTTTTTATTTTAAACGTCTAACTTTTTGGTTACTAGGTTGTACGTTCTTCGTGTTTGTTTCTTTTTATTTGGAAGTTATGCATCTTGTTAACGGTTTGTGGTTCTCACGTCAAAAAAACTATCTTTTTATATACCAAATGTTTTACCATTTTTTCAATTTTTTGATATTGACTTTTAAGTTTTTTAAGGAATTCTATTTATCTCTGATACGGGTTTACGATTTAGGGTTTAGAAGGGTGTGTTTGAATTTGATAGCTTCTTTTATATATAATTTTGTTGGGTCTGATTTTTTAGTGTTCAATATATGTAGGAATGTTTAAGTAATATTTGATAACAAAGTATTATGATAGGGTCCCTATTGTTTTTGTAGTTTATTTGCTTGTGTGTTCCAACTTTTCAAATGGTGTCTAAAATTTAAGCACTTTTCAGTGGTTATCTCTATATAGTAATTGTATGAACCTTTCATATTTTTACAATAATAGTAACTGTATTTGCAAAAAAAGGTATACTTTCCAAAAAAAAAGTTTTTTTTTTTAAAAAAAAATTTAGTTGAGGAATATTGCATCTATGTTTTTTTAGCTTTTTATCTACTTTATTTTTTTATGATATTTCTAAAATAGATTATTTTTTTTCTTTTGAAAATTGTTTAGGAATCTGAATAGTTAGTAGCATAATGTTTTTTTTATCATCAACTTTGTTAAATCTAGTATACTAAGAGTGTTACAATATTAGATTAACTTGTCCATAATTTAACGTAAAATTGTTATTATTTAGAATTATGTAAATGTGCTATCCCTATTCCTTTCTACTTTATTAAATATCCATTTTCCTTAATCTCATGAACTTTTGTGAACAGTGATTTGCAGCCCATACTACGTACACCAAAACGACGTCGGATTTTATCCACAGGACCACAACAATTCCAACATTCTTCAAAGCAATGCCATAATGAGAAGAAGATCAAACACTGAACAAAGAAGAAGCTCTAATAACACTGTCAGTTTTGGGTACGAATCGTGTGAAAATGTTCGAACCGAAACTCTCCCGCTCTTTCCCACGCACCCAACTGGAGATTTACAAGTTGGGCCACTGTCGCCGGCACCTCTGCCGCATGGCACAGCGTCTACATCCGCCTCGTCCTCTTCGGGATACTCGGCTGAAAACTCTTCTGGCGGCTGTGGAACTTACTTTGAATTTTTTCTGTAG

mRNA sequence

ATGGAAAGCACGGCGGAGAGGGGCGGCGGTCCGGCGAGCTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATTTTGGAGAATTTGTACAAACAAGGAGTGCGAACGCCGAGTGCTGACCAAATCCAACAGATTACGAGCCGGCTAAAGGGTTACGGCCATATTGAAGGCAAAAATGTGTTTTATTGGTTTCAAAATCACAAAGCTAGGCAAAGGCAGAAGCAAAAGCAAGATAGTGCAACTTTGGCTTTTTTTAATCACTTTCTGACCTTTAATAACCCTTCTCCTCATTCCCCCAATGTGATTTGCAGCCCATACTACGTACACCAAAACGACGTCGGATTTTATCCACAGGACCACAACAATTCCAACATTCTTCAAAGCAATGCCATAATGAGAAGAAGATCAAACACTGAACAAAGAAGAAGCTCTAATAACACTGTCAGTTTTGGGTACGAATCGTGTGAAAATGTTCGAACCGAAACTCTCCCGCTCTTTCCCACGCACCCAACTGGAGATTTACAAGTTGGGCCACTGTCGCCGGCACCTCTGCCGCATGGCACAGCGTCTACATCCGCCTCGTCCTCTTCGGGATACTCGGCTGAAAACTCTTCTGGCGGCTGTGGAACTTACTTTGAATTTTTTCTGTAG

Coding sequence (CDS)

ATGGAAAGCACGGCGGAGAGGGGCGGCGGTCCGGCGAGCTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATTTTGGAGAATTTGTACAAACAAGGAGTGCGAACGCCGAGTGCTGACCAAATCCAACAGATTACGAGCCGGCTAAAGGGTTACGGCCATATTGAAGGCAAAAATGTGTTTTATTGGTTTCAAAATCACAAAGCTAGGCAAAGGCAGAAGCAAAAGCAAGATAGTGCAACTTTGGCTTTTTTTAATCACTTTCTGACCTTTAATAACCCTTCTCCTCATTCCCCCAATGTGATTTGCAGCCCATACTACGTACACCAAAACGACGTCGGATTTTATCCACAGGACCACAACAATTCCAACATTCTTCAAAGCAATGCCATAATGAGAAGAAGATCAAACACTGAACAAAGAAGAAGCTCTAATAACACTGTCAGTTTTGGGTACGAATCGTGTGAAAATGTTCGAACCGAAACTCTCCCGCTCTTTCCCACGCACCCAACTGGAGATTTACAAGTTGGGCCACTGTCGCCGGCACCTCTGCCGCATGGCACAGCGTCTACATCCGCCTCGTCCTCTTCGGGATACTCGGCTGAAAACTCTTCTGGCGGCTGTGGAACTTACTTTGAATTTTTTCTGTAG

Protein sequence

MESTAERGGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKARQRQKQKQDSATLAFFNHFLTFNNPSPHSPNVICSPYYVHQNDVGFYPQDHNNSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESCENVRTETLPLFPTHPTGDLQVGPLSPAPLPHGTASTSASSSSGYSAENSSGGCGTYFEFFL

Homology

[Close]

BLAST of Sed0011726 vs. NCBI nr
Match: XP_022998665.1 (WUSCHEL-related homeobox 2-like [Cucurbita maxima])

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75
Identity = 160/222 (72.07%), Postives = 176/222 (79.28%), Query Frame = 0


Query: 1   MESTAERGGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNV 60
           ME+TAE GG P SSRWNPTKEQISILENLY+QGVRTPSA+QIQQIT+RLK YGHIEGKNV
Sbjct: 1   MEATAEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNV 60

Query: 61  FYWFQNHKARQRQKQKQD-SATLAFFNHFLTFNNPSPH--SPNVICSPYYVHQNDVGFYP 120
           FYWFQNHKARQRQKQKQD +ATLA+FNHFL     +PH  SPNV+CSPYYVHQN+VG YP
Sbjct: 61  FYWFQNHKARQRQKQKQDHTATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYP 120

Query: 121 QDHNNSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESC--ENVRTETLPLFPTHPTGDLQ 180
              +NS          RRSN+E RRS  N   FGY+SC  +N  T+TLPLFPTHPTGDLQ
Sbjct: 121 HQQSNST--------TRRSNSE-RRSCTNNPGFGYQSCQTDNPATQTLPLFPTHPTGDLQ 180

Query: 181 VGPLSPAPL-PHGTASTSASSSSGYSAENSSGGCGTYFEFFL 217
           VGP  P+PL P   AS SASSSSG SA+ SSGGC TYFEFFL
Sbjct: 181 VGPPPPSPLPPQAMASASASSSSGMSADESSGGCRTYFEFFL 213

[Close]

BLAST of Sed0011726 vs. NCBI nr
Match: KAG6607233.1 (Inner membrane protein ALBINO3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.4 bits (703), Expect = 4.2e-70
Identity = 155/224 (69.20%), Postives = 174/224 (77.68%), Query Frame = 0


Query: 1   MESTAERGGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNV 60
           ME+TAE GG P SSRWNPTKEQISILENLY+QGVRTPSA+QIQQIT+RLK YGHIEGKNV
Sbjct: 1   MEATAEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNV 60

Query: 61  FYWFQNHKARQRQKQKQD-SATLAFFNHFLTFNNPSPH--SPNVICSPYYVHQNDVGFYP 120
           FYWFQNHKARQRQKQKQD SATLA+FNHFL     SPH  SPNV+CSPYYVHQN+VG YP
Sbjct: 61  FYWFQNHKARQRQKQKQDHSATLAYFNHFLPLPPFSPHFPSPNVVCSPYYVHQNNVGVYP 120

Query: 121 QDHNNSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESC--ENVRTETLPLFPTHPTGDLQ 180
           Q               ++SN++ RRS N    FGY+SC  +N  T+TL LFPTHPTGDLQ
Sbjct: 121 Q---------------QQSNSKMRRSHNG--GFGYQSCQNDNPTTQTLSLFPTHPTGDLQ 180

Query: 181 VG-PLSPA-PLPHGTAST-SASSSSGYSAENSSGGCGTYFEFFL 217
            G P SP+ P PH  A+T +AS+SSG SA+ SSGGC TYFEFFL
Sbjct: 181 AGPPPSPSPPPPHAEAATATASASSGMSADESSGGCRTYFEFFL 207

[Close]

BLAST of Sed0011726 vs. NCBI nr
Match: KAG7036919.1 (WUSCHEL-related homeobox 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.2 bits (700), Expect = 9.3e-70
Identity = 153/222 (68.92%), Postives = 173/222 (77.93%), Query Frame = 0


Query: 1   MESTAERGGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNV 60
           ME+TAE GG P SSRWNPTKEQISILENLY+QGVRTPSA+QIQQIT+RLK YGHIEGKNV
Sbjct: 1   MEATAEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNV 60

Query: 61  FYWFQNHKARQRQKQKQD-SATLAFFNHFLTFNNPSPH--SPNVICSPYYVHQNDVGFYP 120
           FYWFQNHKARQRQKQKQD SATLA+FNHFL     +PH  SPNV+CSPYYVHQN+VG YP
Sbjct: 61  FYWFQNHKARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYP 120

Query: 121 QDHNNSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESC--ENVRTETLPLFPTHPTGDLQ 180
           Q               ++SN++ RRS N    FGY+SC  +N  T+TL LFPTHPTGDLQ
Sbjct: 121 Q---------------QQSNSKMRRSHNG--GFGYQSCQNDNPTTQTLSLFPTHPTGDLQ 180

Query: 181 VGPLSPAPLPHGTAST-SASSSSGYSAENSSGGCGTYFEFFL 217
            GP  P+P PH  A+T +AS+SSG SA+ SSGGC TYFEFFL
Sbjct: 181 AGP-PPSP-PHAEAATATASASSGMSADESSGGCRTYFEFFL 203

[Close]

BLAST of Sed0011726 vs. NCBI nr
Match: XP_022158904.1 (WUSCHEL-related homeobox 2 [Momordica charantia])

HSP 1 Score: 259.6 bits (662), Expect = 2.4e-65
Identity = 143/212 (67.45%), Postives = 160/212 (75.47%), Query Frame = 0


Query: 5   AERGGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWF 64
           +E GG PASSRWNPTKEQI ILENLYKQGVRTPSADQI +IT+ LK YGHIEGKNVFYWF
Sbjct: 9   SEVGGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWF 68

Query: 65  QNHKARQRQKQKQDSATLAFFNHFLTFNNPSPHSPNVICSPYYVHQNDVGFYPQDHNNSN 124
           QNHKARQRQKQKQ S  LA F+HFL FN+    SPNV CSPYYVHQNDVG YP  HNNS 
Sbjct: 69  QNHKARQRQKQKQQS--LALFSHFLHFNSNPYSSPNVGCSPYYVHQNDVGLYPPYHNNSK 128

Query: 125 ILQSNAIMRRRSNTEQRRSSNNTVSFGYESCENVRTETLPLFPTHPTGDLQVGPLSPAPL 184
            LQS+ I RRRS +E RR+SN  +     +  N++TETL LFPTHPTGDLQVGPL P   
Sbjct: 129 ALQSSGIARRRSKSE-RRNSNGEIEVSAINL-NIQTETLSLFPTHPTGDLQVGPLPP--- 188

Query: 185 PHGTASTSASSSSGYSAENSSGGCGTYFEFFL 217
                ++S +S+   SA  SS G GTYF+FFL
Sbjct: 189 -----TSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]

BLAST of Sed0011726 vs. NCBI nr
Match: KGN65708.1 (hypothetical protein Csa_019930 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-58
Identity = 132/227 (58.15%), Postives = 152/227 (66.96%), Query Frame = 0


Query: 8   GGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNH 67
           GG P SSRWNPTKEQISILENLY+QGVRTPSADQIQQIT RLK YGHIEGKNVFYWFQNH
Sbjct: 17  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 76

Query: 68  KARQRQKQKQD------SATLAFFNHFLTFNN---------PSPHSPNVICSPYYVHQND 127
           KARQRQKQKQ       +++  FFNHFL FN+         P P   NV+CSPYYVHQND
Sbjct: 77  KARQRQKQKQQHHHHHFNSSFPFFNHFLHFNHNNSPFPPPPPPPPPNNVVCSPYYVHQND 136

Query: 128 VGFYPQDHNNSNILQSNAIMRRRSNTEQRR---SSNNTVSFGYESCENVRTETLPLFPTH 187
           VG YPQ  NNS ++QS  I  +RS +E+R    + N   +    +     TETL LFPTH
Sbjct: 137 VGLYPQYQNNSMVIQSGGIETKRSKSERRNCIININEESTINDNNLSYQTTETLSLFPTH 196

Query: 188 PTGDLQVGPLSPAPLPHGTASTSASSSSGYSAENSSGGCGTYFEFFL 217
           PTGDLQ  P SP P     +    S+S   S ++S+ G   YFEFF+
Sbjct: 197 PTGDLQASPQSPPP----PSMVPTSASDEISVDDSAHGRQPYFEFFM 239

[Close]

BLAST of Sed0011726 vs. ExPASy Swiss-Prot
Match: Q6X7K1 (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.5e-33
Identity = 86/170 (50.59%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 9   GGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHK 68
           G  +SSRWNPTK+QI++LENLYK+G+RTPSADQIQQIT RL+ YGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 69  ARQRQKQKQDSATLAFFNHFL----TFNNPSPHSPNVIC-SPYYVHQNDVGFYPQDHN-- 128
           ARQRQKQKQ+   +A+FN  L     F  P P S NV C SPYY+ Q       Q  +  
Sbjct: 68  ARQRQKQKQE--RMAYFNRLLHKTSRFFYPPPCS-NVGCVSPYYLQQASDHHMNQHGSVY 127

Query: 129 NSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESCENVRTETLPLFPTHPT 172
            +++L  N +M      E+R     TV+   +   ++RT      P  P+
Sbjct: 128 TNDLLHRNNVMIPSGGYEKR-----TVTQHQKQLSDIRTTAATRMPISPS 169

[Close]

BLAST of Sed0011726 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-26
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 12  ASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKARQ 71
           A++RW PTKEQI++LE LY+QG+RTP+A+QIQQIT+RL+ +GHIEGKNVFYWFQNHKARQ
Sbjct: 41  ANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQ 100

Query: 72  RQKQKQDSATLAFFNHF-LTFNNPSP 97
           RQKQKQ S     F++F   F  P P
Sbjct: 101 RQKQKQQS-----FDYFSKLFRRPPP 121

[Close]

BLAST of Sed0011726 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-26
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 12  ASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKARQ 71
           A++RW PTKEQI++LE LY+QG+RTP+A+QIQQIT+RL+ +GHIEGKNVFYWFQNHKARQ
Sbjct: 41  ANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQ 100

Query: 72  RQKQKQDSATLAFFNHF-LTFNNPSP 97
           RQKQKQ S     F++F   F  P P
Sbjct: 101 RQKQKQQS-----FDYFSKLFRRPPP 121

[Close]

BLAST of Sed0011726 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-23
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 13  SSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKARQR 72
           SSRWNPT +Q+ +LE LY+QG RTPSAD IQQIT++L+ YG IEGKNVFYWFQNHKAR+R
Sbjct: 74  SSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARER 133

Query: 73  QKQKQDSAT 82
           QK+++   T
Sbjct: 134 QKRRRQMET 142

[Close]

BLAST of Sed0011726 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-23
Identity = 67/172 (38.95%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 11  PASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKAR 70
           P  +RWNPT+EQI ILE LYK G+RTP+A QI+ IT +L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 71  QRQKQKQDS----------ATLAFFNHFLTFNNPSPHSPNVICSPYYVHQNDVGFYPQDH 130
           +RQKQK+++           T   FN  +T    +  S +++  P    +  V    +++
Sbjct: 146 ERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELV----EEN 205

Query: 131 NNSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESCENVRTETLPLFPTHPTG 173
                 +S           + ++S+   +   +  +NV   TL LFP HP G
Sbjct: 206 EYKRTCRSWGFENLEIENRRNKNSSTMATTFNKIIDNV---TLELFPLHPEG 250

[Close]

BLAST of Sed0011726 vs. ExPASy TrEMBL
Match: A0A6J1KD41 (WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.5e-76
Identity = 160/222 (72.07%), Postives = 176/222 (79.28%), Query Frame = 0


Query: 1   MESTAERGGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNV 60
           ME+TAE GG P SSRWNPTKEQISILENLY+QGVRTPSA+QIQQIT+RLK YGHIEGKNV
Sbjct: 1   MEATAEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNV 60

Query: 61  FYWFQNHKARQRQKQKQD-SATLAFFNHFLTFNNPSPH--SPNVICSPYYVHQNDVGFYP 120
           FYWFQNHKARQRQKQKQD +ATLA+FNHFL     +PH  SPNV+CSPYYVHQN+VG YP
Sbjct: 61  FYWFQNHKARQRQKQKQDHTATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYP 120

Query: 121 QDHNNSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESC--ENVRTETLPLFPTHPTGDLQ 180
              +NS          RRSN+E RRS  N   FGY+SC  +N  T+TLPLFPTHPTGDLQ
Sbjct: 121 HQQSNST--------TRRSNSE-RRSCTNNPGFGYQSCQTDNPATQTLPLFPTHPTGDLQ 180

Query: 181 VGPLSPAPL-PHGTASTSASSSSGYSAENSSGGCGTYFEFFL 217
           VGP  P+PL P   AS SASSSSG SA+ SSGGC TYFEFFL
Sbjct: 181 VGPPPPSPLPPQAMASASASSSSGMSADESSGGCRTYFEFFL 213

[Close]

BLAST of Sed0011726 vs. ExPASy TrEMBL
Match: A0A6J1E0T1 (WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 143/212 (67.45%), Postives = 160/212 (75.47%), Query Frame = 0


Query: 5   AERGGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWF 64
           +E GG PASSRWNPTKEQI ILENLYKQGVRTPSADQI +IT+ LK YGHIEGKNVFYWF
Sbjct: 9   SEVGGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWF 68

Query: 65  QNHKARQRQKQKQDSATLAFFNHFLTFNNPSPHSPNVICSPYYVHQNDVGFYPQDHNNSN 124
           QNHKARQRQKQKQ S  LA F+HFL FN+    SPNV CSPYYVHQNDVG YP  HNNS 
Sbjct: 69  QNHKARQRQKQKQQS--LALFSHFLHFNSNPYSSPNVGCSPYYVHQNDVGLYPPYHNNSK 128

Query: 125 ILQSNAIMRRRSNTEQRRSSNNTVSFGYESCENVRTETLPLFPTHPTGDLQVGPLSPAPL 184
            LQS+ I RRRS +E RR+SN  +     +  N++TETL LFPTHPTGDLQVGPL P   
Sbjct: 129 ALQSSGIARRRSKSE-RRNSNGEIEVSAINL-NIQTETLSLFPTHPTGDLQVGPLPP--- 188

Query: 185 PHGTASTSASSSSGYSAENSSGGCGTYFEFFL 217
                ++S +S+   SA  SS G GTYF+FFL
Sbjct: 189 -----TSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]

BLAST of Sed0011726 vs. ExPASy TrEMBL
Match: A0A0A0LVA9 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 8.0e-59
Identity = 132/227 (58.15%), Postives = 152/227 (66.96%), Query Frame = 0


Query: 8   GGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNH 67
           GG P SSRWNPTKEQISILENLY+QGVRTPSADQIQQIT RLK YGHIEGKNVFYWFQNH
Sbjct: 17  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 76

Query: 68  KARQRQKQKQD------SATLAFFNHFLTFNN---------PSPHSPNVICSPYYVHQND 127
           KARQRQKQKQ       +++  FFNHFL FN+         P P   NV+CSPYYVHQND
Sbjct: 77  KARQRQKQKQQHHHHHFNSSFPFFNHFLHFNHNNSPFPPPPPPPPPNNVVCSPYYVHQND 136

Query: 128 VGFYPQDHNNSNILQSNAIMRRRSNTEQRR---SSNNTVSFGYESCENVRTETLPLFPTH 187
           VG YPQ  NNS ++QS  I  +RS +E+R    + N   +    +     TETL LFPTH
Sbjct: 137 VGLYPQYQNNSMVIQSGGIETKRSKSERRNCIININEESTINDNNLSYQTTETLSLFPTH 196

Query: 188 PTGDLQVGPLSPAPLPHGTASTSASSSSGYSAENSSGGCGTYFEFFL 217
           PTGDLQ  P SP P     +    S+S   S ++S+ G   YFEFF+
Sbjct: 197 PTGDLQASPQSPPP----PSMVPTSASDEISVDDSAHGRQPYFEFFM 239

[Close]

BLAST of Sed0011726 vs. ExPASy TrEMBL
Match: A0A5J5C598 (Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000934 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45
Identity = 117/233 (50.21%), Postives = 145/233 (62.23%), Query Frame = 0


Query: 8   GGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNH 67
           GG PASSRWNPTKEQIS+LENLY+QG+RTPSA+QIQQITSRLK YGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQISMLENLYRQGIRTPSAEQIQQITSRLKAYGHIEGKNVFYWFQNH 71

Query: 68  KARQRQKQKQDSATLAFFNHFLTFNNP-SPHSPNVICSPYYVHQNDVGFYPQDHNNSNIL 127
           KARQRQKQKQ++  +A+++ +L  ++P  P  P V+CSPYY+ QND+GFYP  H    +L
Sbjct: 72  KARQRQKQKQEN--MAYYSRYLHNSSPVFPPCPTVVCSPYYLPQNDLGFYP--HYPKVLL 131

Query: 128 QSNAIMRRRSNTEQRRSSNNTVSFGYESCE----------------------NVRTETLP 187
                ++RR + ++   +N  V  GYE                         N    TLP
Sbjct: 132 PGG--IKRRPSPDKMEKTNTCVGAGYEPSHLRYNVMMHTAGDKNEAAMNNNCNTSQATLP 191

Query: 188 LFPTHPTGDLQVGPLSPAPLPHGTA--STSASSSSGYSAENSSGGCGTYFEFF 216
           LFP  PTG LQ    + + L   +A  ST+ SSSS  +      G   YFEFF
Sbjct: 192 LFPLQPTGILQARTTNNSSLVSTSAENSTTPSSSSDTTGIEQRSGDQPYFEFF 238

[Close]

BLAST of Sed0011726 vs. ExPASy TrEMBL
Match: A0A2R6PQ29 (WUSCHEL-related homeobox like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc25877 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.3e-45
Identity = 109/218 (50.00%), Postives = 141/218 (64.68%), Query Frame = 0


Query: 8   GGGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNH 67
           GG PASSRWNPTKEQIS+LENLYKQG++TP+A+QIQQIT RL+ +GHIEGKNVFYWFQNH
Sbjct: 27  GGAPASSRWNPTKEQISMLENLYKQGIKTPTAEQIQQITGRLQAFGHIEGKNVFYWFQNH 86

Query: 68  KARQRQKQKQDSATLAFFNHFLTFNNPSPHSPNVICSPYYVHQNDVGFYPQDHNNSNILQ 127
           KARQRQKQKQ   +LAF N FL   +P P  PNV+CSPYY+ Q++ GFYPQ + +  +LQ
Sbjct: 87  KARQRQKQKQKQESLAFVNRFL---SPPPPCPNVVCSPYYIPQSEYGFYPQ-YPSKVVLQ 146

Query: 128 SNAIMRRRSNTEQRRSSNNTVSFGYESCENV----------RTETLPLFPTHPTGDLQVG 187
               ++RR   ++  +   +   GYES  +V          + ETL LFP  PTG LQ  
Sbjct: 147 GG--VKRRPRPDRIETHRPSSGAGYESARSVPMNTTASKYSKQETLSLFPLEPTGILQAK 206

Query: 188 PLSPAPLPHGTASTSASSSSGYSAENSSGGCGTYFEFF 216
             +    P  + + S+SS +  + +         F+FF
Sbjct: 207 TTTKRSSPSISTTHSSSSETPRAMDELGSSDYPLFDFF 238

[Close]

BLAST of Sed0011726 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 142.5 bits (358), Expect = 3.9e-34
Identity = 86/170 (50.59%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 9   GGPASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHK 68
           G  +SSRWNPTK+QI++LENLYK+G+RTPSADQIQQIT RL+ YGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 69  ARQRQKQKQDSATLAFFNHFL----TFNNPSPHSPNVIC-SPYYVHQNDVGFYPQDHN-- 128
           ARQRQKQKQ+   +A+FN  L     F  P P S NV C SPYY+ Q       Q  +  
Sbjct: 68  ARQRQKQKQE--RMAYFNRLLHKTSRFFYPPPCS-NVGCVSPYYLQQASDHHMNQHGSVY 127

Query: 129 NSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESCENVRTETLPLFPTHPT 172
            +++L  N +M      E+R     TV+   +   ++RT      P  P+
Sbjct: 128 TNDLLHRNNVMIPSGGYEKR-----TVTQHQKQLSDIRTTAATRMPISPS 169

[Close]

BLAST of Sed0011726 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-24
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 13  SSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKARQR 72
           SSRWNPT +Q+ +LE LY+QG RTPSAD IQQIT++L+ YG IEGKNVFYWFQNHKAR+R
Sbjct: 74  SSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARER 133

Query: 73  QKQKQDSAT 82
           QK+++   T
Sbjct: 134 QKRRRQMET 142

[Close]

BLAST of Sed0011726 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-24
Identity = 67/172 (38.95%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 11  PASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKAR 70
           P  +RWNPT+EQI ILE LYK G+RTP+A QI+ IT +L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 71  QRQKQKQDS----------ATLAFFNHFLTFNNPSPHSPNVICSPYYVHQNDVGFYPQDH 130
           +RQKQK+++           T   FN  +T    +  S +++  P    +  V    +++
Sbjct: 146 ERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELV----EEN 205

Query: 131 NNSNILQSNAIMRRRSNTEQRRSSNNTVSFGYESCENVRTETLPLFPTHPTG 173
                 +S           + ++S+   +   +  +NV   TL LFP HP G
Sbjct: 206 EYKRTCRSWGFENLEIENRRNKNSSTMATTFNKIIDNV---TLELFPLHPEG 250

[Close]

BLAST of Sed0011726 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-21
Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 12 ASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKARQ 71
          AS+RW PT EQ+ ILE +Y+ G+RTP+A QIQQIT+ L  YG IEGKNVFYWFQNHKAR 
Sbjct: 5  ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARD 64

Query: 72 RQKQKQDSA 81
          RQK ++  A
Sbjct: 65 RQKLRKKLA 73

[Close]

BLAST of Sed0011726 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.8e-21
Identity = 55/124 (44.35%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 12  ASSRWNPTKEQISILENLYKQGVRTPSADQIQQITSRLKGYGHIEGKNVFYWFQNHKARQ 71
           A+ RWNPT EQI+ LE LY+ G RTP+ +QIQQI S+L+ YG IEGKNVFYWFQNHKAR+
Sbjct: 58  ATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARE 117

Query: 72  RQKQK-----------QDSATLAFFNHFLTFNNPSPHSPNVICSPYYVHQNDVGFYPQDH 125
           R K++           +D    +   H +      P  P+    P   H+ D   Y +D+
Sbjct: 118 RLKRRRREGGAIIKPHKDVKDSSSGGHRVDQTKLCPSFPHT-NRPQPQHELDPASYNKDN 177

The following BLAST results are available for this feature:

BLAST of Sed0011726 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998665.1	1.1e-75	72.07	WUSCHEL-related homeobox 2-like [Cucurbita maxima]	[more]
KAG6607233.1	4.2e-70	69.20	Inner membrane protein ALBINO3, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
KAG7036919.1	9.3e-70	68.92	WUSCHEL-related homeobox 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022158904.1	2.4e-65	67.45	WUSCHEL-related homeobox 2 [Momordica charantia]	[more]
KGN65708.1	1.6e-58	58.15	hypothetical protein Csa_019930 [Cucumis sativus]	[more]

BLAST of Sed0011726 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7K1	5.5e-33	50.59	WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1	[more]
A2WWU7	2.3e-26	67.44	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 S...	[more]
Q8LR86	2.3e-26	67.44	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2...	[more]
Q6X7K0	4.0e-23	69.57	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q6X7J9	5.2e-23	38.95	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]

BLAST of Sed0011726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KD41	5.5e-76	72.07	WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3...	[more]
A0A6J1E0T1	1.1e-65	67.45	WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 S...	[more]
A0A0A0LVA9	8.0e-59	58.15	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE...	[more]
A0A5J5C598	1.0e-45	50.21	Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000934 P...	[more]
A0A2R6PQ29	2.3e-45	50.00	WUSCHEL-related homeobox like OS=Actinidia chinensis var. chinensis OX=1590841 G...	[more]

BLAST of Sed0011726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59340.1	3.9e-34	50.59	WUSCHEL related homeobox 2	[more]
AT3G18010.1	2.8e-24	69.57	WUSCHEL related homeobox 1	[more]
AT1G46480.1	3.7e-24	38.95	WUSCHEL related homeobox 4	[more]
AT2G28610.1	2.9e-21	66.67	Homeodomain-like superfamily protein	[more]
AT2G01500.1	3.8e-21	44.35	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 11..78 e-value: 6.4E-6 score: 35.7
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 14..73 e-value: 2.0E-19 score: 69.2
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 9..74 score: 10.932251
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 15..75 e-value: 2.63119E-7 score: 44.1565
None	No IPR available	GENE3D	1.10.10.60		coord: 13..80 e-value: 1.3E-10 score: 42.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..205
None	No IPR available	PANTHER	PTHR45940:SF6	TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED	coord: 4..215
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 4..215
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 13..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011726.1	Sed0011726.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity