Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTAATATTGTTTAGATTGACGTGTACTCCAACAAGATGGGAGGTGAATGGAAGAGAGTGAGTTTGTTGTTATGTTTGTTGTGTTTTCATGTTCTTATGTCCACTGCCACTCAAGTGGAAGAGAGGCTGCTATTCTCTGACGAATCTGGTGGAAGTGGAGGTGGTTTTGGAGGAGGATTCGGTGGCGGCGGTGGCGGAAATGGCGGTGGTTCTGGAGGGGGACATGGGGTGGGAGGCGGAAGCGGAAGTGGTGGCGGTTTTGGAGGGGGACATGGGGCTGGAAGTGGCAGTGGCAGTGGCAGTGGAAGTGGAAGTGGCAATGGTTTTGGAGGGGGACATGGGGTTGGCGGCGGAAGCGGAAGTGGCGGCGGTTTTGGAGGGGGACATGGGGTTGGCAGTGGTAGCGGAGGAGGACGAGGGGTTGGAGGCAGTAACGGAAGAGGTGGAGGAGACGGGGTTGGCAGCGGAAGCGGAAATGGTGGCGGTTTTGGAGGGGGACGTGGAGTTGGCAGCGGAAGTGGTGGAGGATTTGGTAAAGGTGGAGGTGTTGGCGGCAGCTTTGGAAAAGGTGATGGTGGAGGTTTTGGTGGTGGTTCTGATGGTGGTCGTGGATTCGGAAGCGGTGGCGGAGGAGGTGGTGGAAGTGGCAGCGGCCAAATTGAACACCACTAA
mRNA sequence
CAAATTAATATTGTTTAGATTGACGTGTACTCCAACAAGATGGGAGGTGAATGGAAGAGAGTGAGTTTGTTGTTATGTTTGTTGTGTTTTCATGTTCTTATGTCCACTGCCACTCAAGTGGAAGAGAGGCTGCTATTCTCTGACGAATCTGGTGGAAGTGGAGGTGGTTTTGGAGGAGGATTCGGTGGCGGCGGTGGCGGAAATGGCGGTGGTTCTGGAGGGGGACATGGGGTGGGAGGCGGAAGCGGAAGTGGTGGCGGTTTTGGAGGGGGACATGGGGCTGGAAGTGGCAGTGGCAGTGGCAGTGGAAGTGGAAGTGGCAATGGTTTTGGAGGGGGACATGGGGTTGGCGGCGGAAGCGGAAGTGGCGGCGGTTTTGGAGGGGGACATGGGGTTGGCAGTGGTAGCGGAGGAGGACGAGGGGTTGGAGGCAGTAACGGAAGAGGTGGAGGAGACGGGGTTGGCAGCGGAAGCGGAAATGGTGGCGGTTTTGGAGGGGGACGTGGAGTTGGCAGCGGAAGTGGTGGAGGATTTGGTAAAGGTGGAGGTGTTGGCGGCAGCTTTGGAAAAGGTGATGGTGGAGGTTTTGGTGGTGGTTCTGATGGTGGTCGTGGATTCGGAAGCGGTGGCGGAGGAGGTGGTGGAAGTGGCAGCGGCCAAATTGAACACCACTAA
Coding sequence (CDS)
ATGGGAGGTGAATGGAAGAGAGTGAGTTTGTTGTTATGTTTGTTGTGTTTTCATGTTCTTATGTCCACTGCCACTCAAGTGGAAGAGAGGCTGCTATTCTCTGACGAATCTGGTGGAAGTGGAGGTGGTTTTGGAGGAGGATTCGGTGGCGGCGGTGGCGGAAATGGCGGTGGTTCTGGAGGGGGACATGGGGTGGGAGGCGGAAGCGGAAGTGGTGGCGGTTTTGGAGGGGGACATGGGGCTGGAAGTGGCAGTGGCAGTGGCAGTGGAAGTGGAAGTGGCAATGGTTTTGGAGGGGGACATGGGGTTGGCGGCGGAAGCGGAAGTGGCGGCGGTTTTGGAGGGGGACATGGGGTTGGCAGTGGTAGCGGAGGAGGACGAGGGGTTGGAGGCAGTAACGGAAGAGGTGGAGGAGACGGGGTTGGCAGCGGAAGCGGAAATGGTGGCGGTTTTGGAGGGGGACGTGGAGTTGGCAGCGGAAGTGGTGGAGGATTTGGTAAAGGTGGAGGTGTTGGCGGCAGCTTTGGAAAAGGTGATGGTGGAGGTTTTGGTGGTGGTTCTGATGGTGGTCGTGGATTCGGAAGCGGTGGCGGAGGAGGTGGTGGAAGTGGCAGCGGCCAAATTGAACACCACTAA
Protein sequence
MGGEWKRVSLLLCLLCFHVLMSTATQVEERLLFSDESGGSGGGFGGGFGGGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSGQIEHH
Homology
BLAST of Sed0011660 vs. NCBI nr
Match:
XP_021752225.1 (glycine-rich cell wall structural protein-like [Chenopodium quinoa])
HSP 1 Score: 61.2 bits (147), Expect = 1.2e-05
Identity = 129/224 (57.59%), Postives = 142/224 (63.39%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGG 60
M G KR+SLL L+CFHV +S+ + +E+ LF G GGGFGGGFGGGG
Sbjct: 1 MKGGTKRLSLLF-LVCFHVFVSSVSGRSLEATKDEDEKFLF-----GKGGGFGGGFGGGG 60
Query: 61 GGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGFGGGHGVGGGSGSGGG 120
GG GGG GGG G GGG G GGG G G GAG G G G G G G G GGG G+GGG G GGG
Sbjct: 61 GGGGGGGGGGGGFGGGGGYGGGGGFGGGAGGGGGLGGGGGGGLGGGGGGGLGGGHGVGGG 120
Query: 121 FGGGHGVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGG 180
GGGHGVG G GGG G+GG G+GG G G+G G G GGG GGG GVG G GGG+GKGGG
Sbjct: 121 IGGGHGVGGGIGGGHGIGGGIGKGGGIGGGIGKGGGLGGGVGGGHGVGGGVGGGYGKGGG 180
Query: 181 VGGSF--------GKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG 207
+GG G G GGG GGG GG G G G GGG G G G
Sbjct: 181 LGGGHGLGGGVGGGYGKGGGLGGGVGGGHGVGGGVGGGYGKGGG 218
BLAST of Sed0011660 vs. NCBI nr
Match:
XP_016902584.1 (PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo])
HSP 1 Score: 60.8 bits (146), Expect = 1.6e-05
Identity = 138/240 (57.50%), Postives = 145/240 (60.42%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GG 60
M WKRV+ LL LLCFHVL+ EE+ LF +SGG GGGFGG GFGGG GG
Sbjct: 22 MASGWKRVA-LLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGG 81
Query: 61 GNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGSGSGNGFGGGHGVGGGSGSGG 120
G GGG GGG G GGG G GGG+GGGHG G G G G G G G G GGG GVGGG G GG
Sbjct: 82 GGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGG 141
Query: 121 GFGGGHGVGSGSGGGRG-------------------VGGSNGRGG------GDGVGSGSG 180
G GGG G G G GGG G VGG G+GG G G G G G
Sbjct: 142 GLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKVGGGIGKGGGLGGGAGGGFGKGGG 201
Query: 181 NGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG 207
GGG G G G G G+GGGFGKGGGVGG FGK GGGFGGG GG G G GGGGGGG G G
Sbjct: 202 LGGGIGKGGGFGGGAGGGFGKGGGVGGGFGK--GGGFGGGVGGGAGGGGGGGGGGGGGGG 258
BLAST of Sed0011660 vs. NCBI nr
Match:
XP_010670979.1 (PREDICTED: glycine-rich cell wall structural protein [Beta vulgaris subsp. vulgaris] >KMT16572.1 hypothetical protein BVRB_3g048620 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 60.8 bits (146), Expect = 1.6e-05
Identity = 130/242 (53.72%), Postives = 144/242 (59.50%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMSTA----------TQVEERLLFSDESGGSGGGFGGGFGG 60
M G KR+SLL LLCFH+ +++ + +E+ LF G GGGFGGGFGG
Sbjct: 1 MKGGTKRLSLLF-LLCFHIAITSVSARYAVTTEKSTEDEKFLF-----GKGGGFGGGFGG 60
Query: 61 GGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGFGGGHGVGGGSGSG 120
GGGG GGG GGG G GGG+G GGGFGGG G G G G+G G G G G GGGHG+GG G
Sbjct: 61 GGGGGGGGGGGG-GFGGGAGGGGGFGGGAGGGFGGGAGGGHGIGGGIGGGHGIGG----G 120
Query: 121 GGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGN------------------GGGFG 180
GG GGGHG+G G GGG G+GG G GGG GVG G G GGGFG
Sbjct: 121 GGLGGGHGIGGGIGGGHGIGGGGGLGGGHGVGGGIGGGHGVGGGIGGGHGVGGGVGGGFG 180
Query: 181 GGRGVGSGSGGGFGKGGGVGGSFGK--------GDGGGFGGGSDGGRGFGSGGGGGGGSG 207
GG GVG G GGG GKGGG+GG GK G GGGFGGG G G G G GGG G G
Sbjct: 181 GGHGVGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGFGGGIGKGGGLGGGVGGGYGKG 231
BLAST of Sed0011660 vs. NCBI nr
Match:
KAA0050716.1 (hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK01449.1 hypothetical protein E5676_scaffold772G00390 [Cucumis melo var. makuwa])
HSP 1 Score: 59.7 bits (143), Expect = 3.5e-05
Identity = 130/215 (60.47%), Postives = 140/215 (65.12%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GG 60
M WKRV+ LL LLCFHVL+ EE+ LF +SGG GGGFGG GFGGG GG
Sbjct: 1 MASGWKRVA-LLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGG 60
Query: 61 GNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGSGSGNGFGGGHGVGGGSGSGG 120
G GGG GGG G GGG G GGG+GGGHG G G G G G G G G GGG GVGGG G GG
Sbjct: 61 GGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGG 120
Query: 121 GFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGV 180
G GGG G G G GGG G G G G G G+G G G GGG GG G+G+GGGFGKGGG+
Sbjct: 121 GLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG----GAGAGGGFGKGGGL 180
Query: 181 GGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG 207
GG GK GGG GGG+ G GFG GGG GGG G G
Sbjct: 181 GGGIGK--GGGLGGGAGAGGGFGKGGGLGGGIGKG 208
BLAST of Sed0011660 vs. NCBI nr
Match:
XP_021721872.1 (glycine-rich cell wall structural protein-like [Chenopodium quinoa])
HSP 1 Score: 58.2 bits (139), Expect = 1.0e-04
Identity = 131/225 (58.22%), Postives = 143/225 (63.56%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMS--------TATQVEERLLFSDESGGSGGGFGGGFGG-G 60
M G KR+SLL L+CFHV +S T +E+ LFS + GG GGGFGGG GG G
Sbjct: 1 MKGGTKRLSLLF-LVCFHVFVSSVSARSLETTKNEDEKFLFS-KGGGFGGGFGGGGGGSG 60
Query: 61 GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGFGGGHGVGGGSGSGG 120
GGG GGG GGG G GGG G GGGFGGG G G G G G G G G GGG G+GGG G GG
Sbjct: 61 GGGGGGGGGGGFGGGGGYGGGGGFGGGVGGGGGLGGGGGGGLGG--GGGGGLGGGHGIGG 120
Query: 121 GFGGGHGVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGG 180
G GGGHGVG G GGG G+GG G+GG G G+G G G GGG GGG GVG G GGG+GKGG
Sbjct: 121 GVGGGHGVGGGIGGGHGIGGGIGKGGGIGGGIGKGGGLGGGVGGGHGVGGGIGGGYGKGG 180
Query: 181 GVGGSF--------GKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG 207
G+GG G G GGG GGG GG G G G GGG G G G
Sbjct: 181 GLGGGHGIGGGVGGGYGKGGGLGGGVGGGHGIGGGVGGGYGKGGG 221
BLAST of Sed0011660 vs. ExPASy Swiss-Prot
Match:
P09789 (Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 PE=1 SV=1)
HSP 1 Score: 46.6 bits (109), Expect = 4.0e-04
Identity = 116/176 (65.91%), Postives = 126/176 (71.59%), Query Frame = 0
Query: 38 GGSGGGFGGGFGGGGG-GNGGGSGGGHGVGGGSGSGGGFGGGHGAGS----GSGSGSGSG 97
GG+GGG GGG GGGGG G GGG+GGG G+GGG G+GGGFGGG G G+ G G G G G
Sbjct: 73 GGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGGGGAGGGFGGGAGGGAGGGLGGGGGLGGG 132
Query: 98 SGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSN--GRGGGDGVGSGSGNGGG 157
G G GGG GVGGG+GSGGGFG G GVG G+G G GVGG G GGG GVG GSG+GGG
Sbjct: 133 GGGGAGGGGGVGGGAGSGGGFGAGGGVGGGAGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 192
Query: 158 FGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG 207
FG G GVG G+GGG G G G GG G G GGG GGGS G GFG+GGG GGG G G
Sbjct: 193 FGAGGGVGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAGGGVGGGVGGG 248
BLAST of Sed0011660 vs. ExPASy TrEMBL
Match:
A0A1S4E2X3 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103499434 PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 7.7e-06
Identity = 138/240 (57.50%), Postives = 145/240 (60.42%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GG 60
M WKRV+ LL LLCFHVL+ EE+ LF +SGG GGGFGG GFGGG GG
Sbjct: 22 MASGWKRVA-LLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGG 81
Query: 61 GNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGSGSGNGFGGGHGVGGGSGSGG 120
G GGG GGG G GGG G GGG+GGGHG G G G G G G G G GGG GVGGG G GG
Sbjct: 82 GGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGG 141
Query: 121 GFGGGHGVGSGSGGGRG-------------------VGGSNGRGG------GDGVGSGSG 180
G GGG G G G GGG G VGG G+GG G G G G G
Sbjct: 142 GLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKVGGGIGKGGGLGGGAGGGFGKGGG 201
Query: 181 NGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG 207
GGG G G G G G+GGGFGKGGGVGG FGK GGGFGGG GG G G GGGGGGG G G
Sbjct: 202 LGGGIGKGGGFGGGAGGGFGKGGGVGGGFGK--GGGFGGGVGGGAGGGGGGGGGGGGGGG 258
BLAST of Sed0011660 vs. ExPASy TrEMBL
Match:
A0A0A0LIH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173020 PE=4 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 1.0e-05
Identity = 134/223 (60.09%), Postives = 142/223 (63.68%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGGGFG-GGGGGN 60
M WKRV+ LL LLCF V++ EE+ LF +SGG G GFGGG G GGGGG
Sbjct: 1 MASGWKRVA-LLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGGGG 60
Query: 61 GGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGSGSGNGFGGGHGVGG-------- 120
GGG GGG G GGG G G GFGGGHG G G G G G G G G GGG GVGG
Sbjct: 61 GGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGGL 120
Query: 121 GSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGF--GGGRGVGSGSGG 180
G GSGGGFG G G+G G+GGG G GG G G G G G G G GGG GGG G G G+GG
Sbjct: 121 GGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGGGAGG 180
Query: 181 GFGKGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG 207
GFGKGGGVGG FGK GGGFGGG GG G G GGGGGGG G G
Sbjct: 181 GFGKGGGVGGGFGK--GGGFGGGVGGGAGGGGGGGGGGGGGGG 220
BLAST of Sed0011660 vs. ExPASy TrEMBL
Match:
A0A5D3BTN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00390 PE=4 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 1.7e-05
Identity = 130/215 (60.47%), Postives = 140/215 (65.12%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GG 60
M WKRV+ LL LLCFHVL+ EE+ LF +SGG GGGFGG GFGGG GG
Sbjct: 1 MASGWKRVA-LLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGG 60
Query: 61 GNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGSGSGNGFGGGHGVGGGSGSGG 120
G GGG GGG G GGG G GGG+GGGHG G G G G G G G G GGG GVGGG G GG
Sbjct: 61 GGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGG 120
Query: 121 GFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGV 180
G GGG G G G GGG G G G G G G+G G G GGG GG G+G+GGGFGKGGG+
Sbjct: 121 GLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG----GAGAGGGFGKGGGL 180
Query: 181 GGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG 207
GG GK GGG GGG+ G GFG GGG GGG G G
Sbjct: 181 GGGIGK--GGGLGGGAGAGGGFGKGGGLGGGIGKG 208
BLAST of Sed0011660 vs. ExPASy TrEMBL
Match:
A0A5N6RDW5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014750 PE=4 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 8.5e-05
Identity = 126/221 (57.01%), Postives = 143/221 (64.71%), Query Frame = 0
Query: 1 MGGEWKRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGG 60
MG +RV+ LL LLC +VL+ + + EE FS SGG GGGFGGGFGGGG
Sbjct: 1 MGRGPRRVA-LLSLLCLYVLVGSVVARNVVSVEKNEEERKFS--SGGKGGGFGGGFGGGG 60
Query: 61 GGNGG---GSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGFGGGHGVGGGSGS 120
G GG G G G G GGG+G GGG GGGHG G G+G G+G G+G GF GGG+G
Sbjct: 61 GAGGGGGVGGGAGGGFGGGAGGGGGIGGGHGIGGGAGGGAGGGAGGGF------GGGAGG 120
Query: 121 GGGFGGGHGVGSGSGGGRGVGG--SNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGK 180
GGG GGGHG+G G+GGG G GG G G G GVG G+G GGG GGG G+G G+GGGFGK
Sbjct: 121 GGGLGGGHGIGGGAGGGFGKGGGIGGGIGKGGGVGGGAGGGGGLGGGHGIGGGAGGGFGK 180
Query: 181 GGGVGGSFGKGD--GGGFGGGSDGGRGFGSGGGGGGGSGSG 207
GGG+GG GKG GGG GGG G G G GGG GGG G G
Sbjct: 181 GGGIGGGIGKGGGVGGGAGGGFGKGGGHGIGGGAGGGFGKG 212
BLAST of Sed0011660 vs. ExPASy TrEMBL
Match:
A0A1S2XY29 (glycine-rich cell wall structural protein isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101503606 PE=4 SV=1)
HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04
Identity = 129/216 (59.72%), Postives = 143/216 (66.20%), Query Frame = 0
Query: 6 KRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGGGGNGG 65
KRV++LL LLC HV +++ + EE+ L + GG GGGFGGG GG GGG GG
Sbjct: 6 KRVAILL-LLCAHVFVASVVARNVASVKEEEEKNLGFGKGGGFGGGFGGG-GGAGGGGGG 65
Query: 66 GSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGFGGGHGVGGGSGSGGGFGGGH 125
G GGG G+GGG+G GGGFGGG G G G G G G G G G GGGHG+GGG G GGG GGG
Sbjct: 66 GFGGGGGIGGGAGGGGGFGGGAGGGHGIGGGGGFGGGGGAGGGHGIGGGIGKGGGLGGGG 125
Query: 126 GVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSF 185
G G G G G G GG G+GG G G G G G GGGFG G GVG G+GGGFGKGGG+GG
Sbjct: 126 GFGKGGGLGGGGGGGFGKGGGLGGGHGGGIGKGGGFGKGGGVGGGAGGGFGKGGGLGGGI 185
Query: 186 GKGDGGGFG-----GGSDGGRGFGSGGGGGGGSGSG 207
GKG GGGFG GG GG GFG GGG GGG G G
Sbjct: 186 GKGGGGGFGKGGGVGGGAGG-GFGKGGGLGGGIGKG 218
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_021752225.1 | 1.2e-05 | 57.59 | glycine-rich cell wall structural protein-like [Chenopodium quinoa] | [more] |
XP_016902584.1 | 1.6e-05 | 57.50 | PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo] | [more] |
XP_010670979.1 | 1.6e-05 | 53.72 | PREDICTED: glycine-rich cell wall structural protein [Beta vulgaris subsp. vulga... | [more] |
KAA0050716.1 | 3.5e-05 | 60.47 | hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK0144... | [more] |
XP_021721872.1 | 1.0e-04 | 58.22 | glycine-rich cell wall structural protein-like [Chenopodium quinoa] | [more] |
Match Name | E-value | Identity | Description | |
P09789 | 4.0e-04 | 65.91 | Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4E2X3 | 7.7e-06 | 57.50 | glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103499... | [more] |
A0A0A0LIH7 | 1.0e-05 | 60.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173020 PE=4 SV=1 | [more] |
A0A5D3BTN6 | 1.7e-05 | 60.47 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5N6RDW5 | 8.5e-05 | 57.01 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014750 PE=4 SV=1 | [more] |
A0A1S2XY29 | 1.4e-04 | 59.72 | glycine-rich cell wall structural protein isoform X1 OS=Cicer arietinum OX=3827 ... | [more] |
Match Name | E-value | Identity | Description | |