Homology
BLAST of Sed0011629 vs. NCBI nr
Match:
XP_022157354.1 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])
HSP 1 Score: 702.6 bits (1812), Expect = 2.0e-198
Identity = 338/397 (85.14%), Postives = 365/397 (91.94%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG HIVRSI++ YHHL++ VRCKTTSSQYVASR RDPTFEK MD YKN LKVVAVQDLIL
Sbjct: 1 MGPHIVRSIAKRYHHLSMVVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAVQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKSQP C+LTD A+ IF
Sbjct: 61 ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSQPFCRLTDAATLIF 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
HEEADAINASLPQVVDRLVRLL MSNS+ LPLRAIYKVWRELGLPD+FEDSVI K+SHIF
Sbjct: 121 HEEADAINASLPQVVDRLVRLLSMSNSKMLPLRAIYKVWRELGLPDDFEDSVIYKHSHIF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTHFLKLVD P+NHFRAA+E+WRVTECC++DC +DETEI+YSFKHS PPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFRAAVEKWRVTECCKEDCTIDETEIKYSFKHSCPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+KNFKAKVKEWQ CPYTGPY G FE NK+GNT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKNFKAKVKEWQRCPYTGPYEGIFE-NKYGNTSMALEKRAVSIVHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
KLL LV MGRRGLSHSGLRQK +QI + DG LP DNK
Sbjct: 361 KLLDLVVMGRRGLSHSGLRQKVNQINSEDGDLPLDNK 396
BLAST of Sed0011629 vs. NCBI nr
Match:
XP_038879589.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038879590.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])
HSP 1 Score: 698.7 bits (1802), Expect = 2.8e-197
Identity = 332/392 (84.69%), Postives = 363/392 (92.60%), Query Frame = 0
Query: 3 EMGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLI 62
+MG HI RS+++ YHHLN+ VRCKTTSSQYVASR RDPTFEK MD YKNLLKVVA+QDLI
Sbjct: 9 KMGPHIFRSLAKRYHHLNMVVRCKTTSSQYVASRARDPTFEKLMDKYKNLLKVVAIQDLI 68
Query: 63 LVNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQI 122
L NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+Q+
Sbjct: 69 LANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQL 128
Query: 123 FHEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHI 182
F EEADAINASLP+VVDRLVRLL MSNS+ +PLRAIYKVWRELGLPDNFEDSVISKYSHI
Sbjct: 129 FSEEADAINASLPEVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDNFEDSVISKYSHI 188
Query: 183 FQLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPG 242
FQLCDA EPNTHFLKL D P++HFRAA+EEWRVT+CC++DC+VDETEIQYSFKHSYPPG
Sbjct: 189 FQLCDAHEPNTHFLKLADHIPRHHFRAAVEEWRVTQCCKEDCSVDETEIQYSFKHSYPPG 248
Query: 243 MRLQKNFKAKVKEWQMCPYTGPYGGKFE-SNKHGNTNIALEKRAVSIVHEFLTLTVEKMV 302
MRL+KNFKAKVKEWQ CPY GPY G + SNK+ NT+IALEK+AVSIVHEF+TLTVEKMV
Sbjct: 249 MRLKKNFKAKVKEWQKCPYIGPYEGTLDNSNKYKNTSIALEKQAVSIVHEFMTLTVEKMV 308
Query: 303 EVEKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSV 362
E+EKISHFRKWFG+ELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+V
Sbjct: 309 EIEKISHFRKWFGVELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTV 368
Query: 363 RRKLLYLVAMGRRGLSHSGLRQKADQIQNGDG 394
RRKLL LVAMGRRGLSHSG RQKADQ+QN DG
Sbjct: 369 RRKLLDLVAMGRRGLSHSGSRQKADQVQNEDG 400
BLAST of Sed0011629 vs. NCBI nr
Match:
XP_008451076.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])
HSP 1 Score: 691.4 bits (1783), Expect = 4.5e-195
Identity = 332/393 (84.48%), Postives = 355/393 (90.33%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG HI RSI Y HLN+FVRCK TSSQYVASR RDPTFEK MD YKN LKVVA+QDLIL
Sbjct: 1 MGPHIFRSIGERYLHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+QIF
Sbjct: 61 ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
EEADAINASLPQVVDRLVRLL MSNS+ +PLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTH+LKLVD P+N FRAA+EEWRV +CC +DC VDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+K FKAKVKEWQ CPYTGPY G +SNK+ NT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKIFKAKVKEWQQCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLP 397
KLL LVAMGRRGLS S LRQKADQI N DGG P
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGGFP 393
BLAST of Sed0011629 vs. NCBI nr
Match:
XP_011660083.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hypothetical protein Csa_006877 [Cucumis sativus])
HSP 1 Score: 686.0 bits (1769), Expect = 1.9e-193
Identity = 329/393 (83.72%), Postives = 356/393 (90.59%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG HI RSI+ YHHLN+FVRCK TSSQYVASR RDPTFEK MD YK+ LKVVA+QDLIL
Sbjct: 1 MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+QIF
Sbjct: 61 ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
EEADAINASLPQVVDRLVRLL MSNS+ +PLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTH+LKLVD P+N FRAA+EEWRV + C++DC VDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+K FKAKV+EWQ CPYTGPY G +SNK+ NT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLP 397
KLL LVAMGRRGLS S LRQKADQI N DG P
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFP 393
BLAST of Sed0011629 vs. NCBI nr
Match:
XP_023516230.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 684.1 bits (1764), Expect = 7.2e-193
Identity = 332/397 (83.63%), Postives = 354/397 (89.17%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG HI RSIS+ YH+LN+ VRCKTTSSQYVASR RDPTFEK MD YKNLLKVVAVQDLIL
Sbjct: 1 MGPHIFRSISKRYHYLNMVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SLEFLSRLSQKLHLNRGA++FLRKYPHIFHIFYDPNK+QP CKLTDTA I
Sbjct: 61 ANPRNQSVSLEFLSRLSQKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIV 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
EEADAI+ASLPQVVDRLVRLL M+NS+ LPLRAIYKVWRELGLPDNFED VISK SHIF
Sbjct: 121 CEEADAIHASLPQVVDRLVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTHFLKLVD P+NHFRAA++EWRVT+CC+ +VDETEI+YSFKHSYPPGM
Sbjct: 181 QLCDAYEPNTHFLKLVDDIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+K FKAKVKEWQ CPYTGPY G +SNK+GNT IALEKRAVSI+HEF+TLTVEKMVEV
Sbjct: 241 RLRKTFKAKVKEWQRCPYTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
KLL V MGRRGL S LRQK DQI N DG P NK
Sbjct: 361 KLLDFVDMGRRGLPPSSLRQKVDQIHNEDGDFPLGNK 397
BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 227.6 bits (579), Expect = 2.4e-58
Identity = 133/349 (38.11%), Postives = 200/349 (57.31%), Query Frame = 0
Query: 36 RVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHL---NRGASAF 95
RVRD ++ +M+ K + KVV LIL P N + ++ L L+++L L AF
Sbjct: 46 RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105
Query: 96 LRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQK 155
L K+PH+F I+ P + C+LT A E +A+ +P V RL +L++MSN+ +
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165
Query: 156 LPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIE 215
+ L + E GLP++FE SVI K+ F+L D E ++++V++ P N AIE
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225
Query: 216 EWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPY----GGK 275
RV E + +D ++++SF ++PPG ++ K F+ V +WQ PY PY G
Sbjct: 226 --RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285
Query: 276 FESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPG 335
S + N LEKR+V+ +HE L+LTVEK + +E+I+HFR + +++ L H G
Sbjct: 286 LRSMEAQN---RLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345
Query: 336 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRR 375
IFY+ST+ GK HTVFLRE Y+RG L++PN VY RR+L LV M R
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPR 387
BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 1.8e-32
Identity = 96/347 (27.67%), Postives = 178/347 (51.30%), Query Frame = 0
Query: 30 SQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGA 89
+Q R ++ F+ + K L V+ ++++++ NP ++ SL L R + L L R
Sbjct: 57 AQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGLTRKR 116
Query: 90 S--AFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLM 149
A L+++P +F + + S +LT A +++ +E N S V +L +LL+M
Sbjct: 117 RLIALLKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMM 176
Query: 150 SNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDA-LEPNTHFLKLVDQTPKNH 209
S +++ + I + +LGLP F D++ +Y F++ P + +
Sbjct: 177 SQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSA 236
Query: 210 FRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYG 269
A EE R E ++ +D ++++ + P G++L + +V +++ PY PY
Sbjct: 237 AEVAEEENRAREEQERNLIIDR-PLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYISPY- 296
Query: 270 GKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDH 329
F + G+ EK A +VHE L+LT+EK V+ ++HFR+ F ++R + + H
Sbjct: 297 SDFSHLRSGSAE--KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 356
Query: 330 PGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGR 374
P +FY+S KG R +VFLREAY+ L++ + + ++ K+ LVA+ R
Sbjct: 357 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPR 396
BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 140.6 bits (353), Expect = 3.9e-32
Identity = 105/343 (30.61%), Postives = 174/343 (50.73%), Query Frame = 0
Query: 36 RVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHL--NRGASAFL 95
R ++ TF+ + K L V+ ++ ILV+ ++ SL L + + L L R A L
Sbjct: 78 RRKELTFDSVVQRDKKLKLVLNIRK-ILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALL 137
Query: 96 RKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQKL 155
RKYP +F I + S K+T A +++ +E N +V +L +L++MS +++
Sbjct: 138 RKYPGVFEIVEEGAYSLRF-KMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRI 197
Query: 156 PLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAA--- 215
L I + +LGLP F D++ +Y F++ P L+L P+ AA
Sbjct: 198 LLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPT--PRGPALELTHWDPELAVSAAELS 257
Query: 216 IEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYGGKFE 275
++ R E ++ +D K P G+ L K+ K+ +++ Y PY K
Sbjct: 258 EDDNRTRESEERNLIIDRPPKFNRVK--LPRGLNLSKSETRKISQFRDMQYISPY--KDF 317
Query: 276 SNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIF 335
S+ T + EK A ++HE L+LT EK V+ ++HFR+ F +R + + HP +F
Sbjct: 318 SHLRSGT-LEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLF 377
Query: 336 YLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGR 374
Y+S KG+R +VFLREAY LID +P+ V+ K+ LV++ R
Sbjct: 378 YVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411
BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 140.6 bits (353), Expect = 3.9e-32
Identity = 100/349 (28.65%), Postives = 179/349 (51.29%), Query Frame = 0
Query: 30 SQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGA 89
+Q R ++ F+ + K L V+ ++++++ P ++ SL L R + L L R
Sbjct: 51 AQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQP-DRVMSLRELGRFRRDLGLTRKR 110
Query: 90 S--AFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLM 149
A LR++P +F + + S +LT A +++ +E N S V +L +LL+M
Sbjct: 111 RLIALLRRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMM 170
Query: 150 SNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHF 209
S +++ + + + +LGLP F D+V +Y F++ L+L P+
Sbjct: 171 SQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRV--VRMDRGPALELTHWDPELAV 230
Query: 210 RA---AIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGP 269
A A EE R E ++ +D ++++ + P G++L + ++ ++ PY P
Sbjct: 231 SAAELAEEESRAREAEERNLIIDR-PLKFN-RVRLPKGLKLTRGEARRIARFKEMPYISP 290
Query: 270 YGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFL 329
Y F + G+ EK A +VHE L+LTVEK V+ ++HFR+ F ++R + +
Sbjct: 291 Y-ADFSHLRSGSDE--KEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMII 350
Query: 330 DHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGR 374
HP +FY+S KG R +VFLREAY+ L++ N + ++ K+ LVA+ R
Sbjct: 351 RHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPR 390
BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 131.0 bits (328), Expect = 3.1e-29
Identity = 102/338 (30.18%), Postives = 165/338 (48.82%), Query Frame = 0
Query: 38 RDPTFEKFMDNYKNLLK------VVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGASA 97
RDP F DN +++L+ VV++++ I+ P N+ + +S+ +++ ++ +
Sbjct: 33 RDPYF----DNIEHILRSSQLKSVVSLKNCIVQEP-NRCIPISAISKKTRQFDVSTKIAH 92
Query: 98 FLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQ 157
FLRK+P IF F P + P +LT A+++ +E S + DRL +L+LMS
Sbjct: 93 FLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDN 152
Query: 158 KLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAI 217
LPL + + LGLPD++ F+ D +E L VD + + +
Sbjct: 153 VLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVD-MEDGVKGL-AVDYNGGDKVLSVL 212
Query: 218 EEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYGGKFES 277
++ + R + +++E E F G RL+ + + E+Q PY PY S
Sbjct: 213 QK-NAMKKRRGEVSLEEIE----FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDD--YS 272
Query: 278 NKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFY 337
+++IA EKR V +HE L L VE E +K+ +K FG+ V F HP IFY
Sbjct: 273 CLDPSSDIA-EKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFY 332
Query: 338 LSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLV 370
LS K K T LRE Y ++ +PV VR+K + L+
Sbjct: 333 LSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355
BLAST of Sed0011629 vs. ExPASy TrEMBL
Match:
A0A6J1DW95 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111024077 PE=4 SV=1)
HSP 1 Score: 702.6 bits (1812), Expect = 9.5e-199
Identity = 338/397 (85.14%), Postives = 365/397 (91.94%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG HIVRSI++ YHHL++ VRCKTTSSQYVASR RDPTFEK MD YKN LKVVAVQDLIL
Sbjct: 1 MGPHIVRSIAKRYHHLSMVVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAVQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKSQP C+LTD A+ IF
Sbjct: 61 ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSQPFCRLTDAATLIF 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
HEEADAINASLPQVVDRLVRLL MSNS+ LPLRAIYKVWRELGLPD+FEDSVI K+SHIF
Sbjct: 121 HEEADAINASLPQVVDRLVRLLSMSNSKMLPLRAIYKVWRELGLPDDFEDSVIYKHSHIF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTHFLKLVD P+NHFRAA+E+WRVTECC++DC +DETEI+YSFKHS PPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFRAAVEKWRVTECCKEDCTIDETEIKYSFKHSCPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+KNFKAKVKEWQ CPYTGPY G FE NK+GNT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKNFKAKVKEWQRCPYTGPYEGIFE-NKYGNTSMALEKRAVSIVHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
KLL LV MGRRGLSHSGLRQK +QI + DG LP DNK
Sbjct: 361 KLLDLVVMGRRGLSHSGLRQKVNQINSEDGDLPLDNK 396
BLAST of Sed0011629 vs. ExPASy TrEMBL
Match:
A0A1S3BQP0 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4 SV=1)
HSP 1 Score: 691.4 bits (1783), Expect = 2.2e-195
Identity = 332/393 (84.48%), Postives = 355/393 (90.33%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG HI RSI Y HLN+FVRCK TSSQYVASR RDPTFEK MD YKN LKVVA+QDLIL
Sbjct: 1 MGPHIFRSIGERYLHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+QIF
Sbjct: 61 ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
EEADAINASLPQVVDRLVRLL MSNS+ +PLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTH+LKLVD P+N FRAA+EEWRV +CC +DC VDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+K FKAKVKEWQ CPYTGPY G +SNK+ NT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKIFKAKVKEWQQCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLP 397
KLL LVAMGRRGLS S LRQKADQI N DGG P
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGGFP 393
BLAST of Sed0011629 vs. ExPASy TrEMBL
Match:
A0A0A0LWZ0 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 SV=1)
HSP 1 Score: 686.0 bits (1769), Expect = 9.2e-194
Identity = 329/393 (83.72%), Postives = 356/393 (90.59%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG HI RSI+ YHHLN+FVRCK TSSQYVASR RDPTFEK MD YK+ LKVVA+QDLIL
Sbjct: 1 MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+QIF
Sbjct: 61 ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
EEADAINASLPQVVDRLVRLL MSNS+ +PLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTH+LKLVD P+N FRAA+EEWRV + C++DC VDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+K FKAKV+EWQ CPYTGPY G +SNK+ NT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLP 397
KLL LVAMGRRGLS S LRQKADQI N DG P
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFP 393
BLAST of Sed0011629 vs. ExPASy TrEMBL
Match:
A0A6J1JGE7 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111485476 PE=4 SV=1)
HSP 1 Score: 680.6 bits (1755), Expect = 3.9e-192
Identity = 328/397 (82.62%), Postives = 351/397 (88.41%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG I RSI + YH+LN+FVRCKTTSSQYVASR RDPTFEK MD YKNLLKVVAVQDLIL
Sbjct: 1 MGPQIFRSIPKRYHYLNMFVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SLEFL RLSQKLHLNRGA++FLRKYPHIFHIFYDPNK+QP CKLTDTA I
Sbjct: 61 ANPRNQSVSLEFLLRLSQKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIV 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
EEADAINASLPQVV RLVRLL MSNS+ LPLRAIYKVWRE GLPDNFED VISK SHIF
Sbjct: 121 CEEADAINASLPQVVGRLVRLLSMSNSKMLPLRAIYKVWREFGLPDNFEDCVISKNSHIF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTHFLKLVD P+NHF+AA++EWRVT+CC+ C +DETEI+YSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFQAAVDEWRVTQCCKDGCTIDETEIKYSFKHSYPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+K FKAKVK+WQ CPYTGPY G +SNK+GNT IALEKRAVSI+HEF+TLTVEKMVEV
Sbjct: 241 RLRKTFKAKVKDWQRCPYTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
KLL V MGRRGL S LRQK DQI N DG P DNK
Sbjct: 361 KLLDFVDMGRRGLPPSNLRQKVDQIHNEDGDFPLDNK 397
BLAST of Sed0011629 vs. ExPASy TrEMBL
Match:
A0A6J1H9C9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC111461311 PE=4 SV=1)
HSP 1 Score: 680.6 bits (1755), Expect = 3.9e-192
Identity = 330/397 (83.12%), Postives = 349/397 (87.91%), Query Frame = 0
Query: 4 MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
MG HI RSI + Y +LN+ VRCKTTSSQYVASR RDPTFEK MD YKNLLKVVAVQDLIL
Sbjct: 1 MGPHIFRSIPKRYQYLNMVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLIL 60
Query: 64 VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
NPRNQS SLEFLSRLSQKLHLNRGA++FLRKYPHIFHIFYDPNK+QP CKLTDTA I
Sbjct: 61 ANPRNQSVSLEFLSRLSQKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIV 120
Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
EEADAINASLP VVDRLVRLL MSNS+ LPLRAIYKVWRELGLPDNFED VISK SHIF
Sbjct: 121 CEEADAINASLPLVVDRLVRLLSMSNSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIF 180
Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
QLCDA EPNTHFLKLVD P+NHFRAA++EWRVT+CC+ C VDETEI+YSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFRAAVDEWRVTQCCKDGCTVDETEIKYSFKHSYPPGM 240
Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
RL+K FKAKVKEWQ CPYTGPY G + NKHGNT IALEKR VSI+HEF+TLTVEKMVEV
Sbjct: 241 RLRKTFKAKVKEWQRCPYTGPYEGTLDGNKHGNTAIALEKRTVSIIHEFMTLTVEKMVEV 300
Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
KLL V MGRRGL S LRQK DQI DG P DNK
Sbjct: 361 KLLDFVDMGRRGLPPSSLRQKVDQIHIEDGDFPLDNK 397
BLAST of Sed0011629 vs. TAIR 10
Match:
AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 505.0 bits (1299), Expect = 5.6e-143
Identity = 253/371 (68.19%), Postives = 292/371 (78.71%), Query Frame = 0
Query: 21 IFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQ--SASLEFLSR 80
I VR TTS+QYVASR RDP FEK MD YKNLLKV+A+QDL L NP S S+EFLSR
Sbjct: 19 INVRSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSR 78
Query: 81 LSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVV 140
LSQKLHLNRGA++FLRKYPHIFH+ YDP K++P C+LTD A +I +EA AI A+L VV
Sbjct: 79 LSQKLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVV 138
Query: 141 DRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKL 200
DRLVRLL MS S+ +PLRA++KVWRELGLPD+FEDSVISK H+F+L D E NTH L+L
Sbjct: 139 DRLVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILEL 198
Query: 201 VDQTPKN-HFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQ 260
V + K F AA+E+WRV EC ++DC+VD TEIQ+SFKHSYPPGMRL K FKAKVKEWQ
Sbjct: 199 VQEEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQ 258
Query: 261 MCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIEL 320
PY GPY K + + +EKRAV+I HEFL LTVEKMVEVEKISHFRK FGI+L
Sbjct: 259 RLPYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDL 318
Query: 321 NVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRR-GL 380
N+RDLFLDHPG+FY+STKGKRHTVFLREAYERG LIDPNPVY RRKLL LV +GR L
Sbjct: 319 NIRDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAAL 378
Query: 381 SHSGLRQKADQ 388
S SG ++Q
Sbjct: 379 SESGNTSMSEQ 389
BLAST of Sed0011629 vs. TAIR 10
Match:
AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 258.5 bits (659), Expect = 9.1e-69
Identity = 139/340 (40.88%), Postives = 200/340 (58.82%), Query Frame = 0
Query: 35 SRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGASAFLR 94
+R RD +K + + L ++ + L+ R SL+ +SR + LN AF+
Sbjct: 67 NRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIG 126
Query: 95 KYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQKLP 154
KYPH F IF P CK+T+ + EE + + V R+ +LLL+S L
Sbjct: 127 KYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLR 186
Query: 155 LRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIEEW 214
+ A+ + +ELGLP++F DS+++KYS F+L D L+LVD+ ++ A +EEW
Sbjct: 187 VHALRLIRKELGLPEDFRDSILAKYSSEFRLVD-----LETLELVDRDDESLCVAKVEEW 246
Query: 215 RVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYGGKFESNKH 274
R E K + ET Y+F P G +++K F+ ++K WQ PY PY K S
Sbjct: 247 REVEYREKWLSKFET--NYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEISRGL 306
Query: 275 GNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFYLST 334
EKR V+++HE L+LTVEKMVEVE+++HFRK GIE+NVR++ L HPGIFY+ST
Sbjct: 307 ER----FEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVST 366
Query: 335 KGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRR 375
KG T+FLREAY +GCLI+PNP+Y+VRRK+L LV + R
Sbjct: 367 KGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTR 395
BLAST of Sed0011629 vs. TAIR 10
Match:
AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 245.0 bits (624), Expect = 1.0e-64
Identity = 130/301 (43.19%), Postives = 183/301 (60.80%), Query Frame = 0
Query: 74 EFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINAS 133
+ +SR + LN AF+ KYPH F IF P CK+T+ + EE + +
Sbjct: 21 KLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVREC 80
Query: 134 LPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNT 193
V R+ +LLL+S L + A+ + +ELGLP++F DS+++KYS F+L D
Sbjct: 81 EVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVD-----L 140
Query: 194 HFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKV 253
L+LVD+ ++ A +EEWR E K + ET Y+F P G +++K F+ ++
Sbjct: 141 ETLELVDRDDESLCVAKVEEWREVEYREKWLSKFET--NYAFPIHLPTGFKIEKGFREEL 200
Query: 254 KEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWF 313
K WQ PY PY K S EKR V+++HE L+LTVEKMVEVE+++HFRK
Sbjct: 201 KNWQRVPYVKPYDRKEISRGLER----FEKRVVAVIHELLSLTVEKMVEVERLAHFRKDL 260
Query: 314 GIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGR 373
GIE+NVR++ L HPGIFY+STKG T+FLREAY +GCLI+PNP+Y+VRRK+L LV +
Sbjct: 261 GIEVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKT 310
Query: 374 R 375
R
Sbjct: 321 R 310
BLAST of Sed0011629 vs. TAIR 10
Match:
AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 227.6 bits (579), Expect = 1.7e-59
Identity = 133/349 (38.11%), Postives = 200/349 (57.31%), Query Frame = 0
Query: 36 RVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHL---NRGASAF 95
RVRD ++ +M+ K + KVV LIL P N + ++ L L+++L L AF
Sbjct: 46 RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105
Query: 96 LRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQK 155
L K+PH+F I+ P + C+LT A E +A+ +P V RL +L++MSN+ +
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165
Query: 156 LPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIE 215
+ L + E GLP++FE SVI K+ F+L D E ++++V++ P N AIE
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225
Query: 216 EWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPY----GGK 275
RV E + +D ++++SF ++PPG ++ K F+ V +WQ PY PY G
Sbjct: 226 --RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285
Query: 276 FESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPG 335
S + N LEKR+V+ +HE L+LTVEK + +E+I+HFR + +++ L H G
Sbjct: 286 LRSMEAQN---RLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345
Query: 336 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRR 375
IFY+ST+ GK HTVFLRE Y+RG L++PN VY RR+L LV M R
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPR 387
BLAST of Sed0011629 vs. TAIR 10
Match:
AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 152.5 bits (384), Expect = 7.1e-37
Identity = 110/347 (31.70%), Postives = 172/347 (49.57%), Query Frame = 0
Query: 37 VRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGASAFLRKY 96
V++ + +D +L ++D I +P + + ++ + L L FLR+Y
Sbjct: 36 VKNKNLDHVIDTETDLKAACILKDAIKRSPTG-FLTAKSVADWQKLLGLTVPVLRFLRRY 95
Query: 97 PHIFHIF-YDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQKLPL 156
P +FH F + S P KLTDTA + +E + V+RL R+L+M S+ + L
Sbjct: 96 PTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRSKTVSL 155
Query: 157 RAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIEEWR 216
R+++ + +LGLPDN+E +++ KY F A N LKLV + F A +
Sbjct: 156 RSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNP-CLKLVKWRDEFAFSALQKR-- 215
Query: 217 VTECCRKDCNVDETEIQY----------SFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPY 276
+D +V E +Y +F S+P G QK KA + E+Q PY PY
Sbjct: 216 -----NEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPY 275
Query: 277 GGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLD 336
SN +++ +EKRAV+++HE L+LT+ K + + R I LF
Sbjct: 276 DD--PSNIDPESDL-MEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTR 335
Query: 337 HPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMG 373
+PGIFYLS K K TV L+E Y RG L+DP+P+ +R K +++ G
Sbjct: 336 YPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTG 370
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157354.1 | 2.0e-198 | 85.14 | LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia] | [more] |
XP_038879589.1 | 2.8e-197 | 84.69 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038879590.1 protein ... | [more] |
XP_008451076.1 | 4.5e-195 | 84.48 | PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] | [more] |
XP_011660083.1 | 1.9e-193 | 83.72 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hypothetical p... | [more] |
XP_023516230.1 | 7.2e-193 | 83.63 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q689D6 | 2.4e-58 | 38.11 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
Q65XL5 | 1.8e-32 | 27.67 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
A0MFS5 | 3.9e-32 | 30.61 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
B6TTV8 | 3.9e-32 | 28.65 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
Q9ZUZ6 | 3.1e-29 | 30.18 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DW95 | 9.5e-199 | 85.14 | LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia ... | [more] |
A0A1S3BQP0 | 2.2e-195 | 84.48 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4... | [more] |
A0A0A0LWZ0 | 9.2e-194 | 83.72 | PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 S... | [more] |
A0A6J1JGE7 | 3.9e-192 | 82.62 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111485476 ... | [more] |
A0A6J1H9C9 | 3.9e-192 | 83.12 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC11146131... | [more] |
Match Name | E-value | Identity | Description | |
AT1G06440.1 | 5.6e-143 | 68.19 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.2 | 9.1e-69 | 40.88 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.1 | 1.0e-64 | 43.19 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G33495.1 | 1.7e-59 | 38.11 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT3G58520.1 | 7.1e-37 | 31.70 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |