Sed0011629 (gene) Chayote v1

Overview
NameSed0011629
Typegene
OrganismSechium edule (Chayote v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
LocationLG08: 10227400 .. 10232360 (+)
RNA-Seq ExpressionSed0011629
SyntenySed0011629
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATTCGTTTTCTCTCTCTTCCTCTTTCTCTCCCCGATTTTCCGACCAGCCTCGCCGGAGCTTCATTCCGCCAGTCGCCGTGGTCAGTCGTCCGTGTCTGAGGAGGTCGCCGTCACAAGCCCAGTTCGTCGCCCGTCGTTGAAGCTACCGTCTGGGTCTTCGCCGTGGTTGTGGGTTGCTTCTCAGCAGCCGGTTGGTTTGTGCCGTCGTCGGTTGGTTCGTCCGAGTGTGGGTTGTTTGTGTTGTCGTCGCCTAGCCATTTCTGTTCAGCTCGAGATCGCTGTGGGTTCGAGCTTGTGGTGCCGTCGCGAGTTTATGAGAAGCAGCCTCGTCGTCGCCGCCGGAGCTACTCTGAGGTGAGAGGTTTGTTTTTCAAAAGGGACATTAGTTTATGTTGTCTCACTCGTGACCTCAATGATGTGATATTTTTAAGGAGGGAACAAAGATTTTGAATGTGACATTAGTTTATGGGGCGGGGTAAGTCGAAGCCATACAGAAAACAGAATGTGTATTATATATCCATTTCCAAGTATTTTCTAAAGAACACCCTGGATTTCTCTTCAATGCTGAAGAATTTTGAATGTCGTATATTGGTCATTGCCTCAGACACTTCACTTAGAAAATGACCCTAGATTTCACTGTGAGAAGTGAAATGATCTTTGAGAAAACTATTCTGGAAATATTTCATCAAAATTAGTACTTAGATCATTGTATAAACTACTGTTGTGCTAATGCTGTGATTTAATTTGAAGCCCACGTAGTTTTTCGAGGTTTCTATATTTGTTTGTTCATGAAAGAAATGGGAACTCATATAGTTAGGTCCATTTCTAGAAGTTACCATCATCTCAATATTTTTGTTAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGTTAGAGATCCAACGTTTGAGAAATTTATGGATAATTACAAAAATCTTCTCAAAGTGGTTGCTGTTCAAGATCTTATCCTCGTTAATCCAAGGAATCAATCAGCATCTTTAGAATTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGTGCTTCCGCCTTCCTTCGCAAATACCCTCATATTTTTCACATATTCTATGATCCAAATAAGTCCCAGCCAATTTGCAAATTAACAGATACTGCCAGCCAAATATTTCACGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAAGTTGTTGACAGATTAGTCCGACTTTTATTAATGTCGAATTCTCAGAAGTTACCACTGCGTGCCATTTACAAGGTTTGGAGGGAGCTTGGCCTCCCCGACAATTTTGAGGACTCTGTGATATCCAAATACTCTCATATTTTTCAGCTCTGTGATGCTCTTGAACCAAATACTCATTTTCTGAAGTTGGTTGATCAGACTCCAAAAAATCATTTCAGAGCAGCTATTGAGGAATGGAGAGTTACCGAGTGTTGTAGAAAAGACTGCAATGTTGATGAGACAGAAATTCAGTATAGTTTTAAACATAGCTACCCTCCAGGAATGCGGTTGCAAAAGAACTTCAAGGCCAAGGTCAAGGAATGGCAAATGTGTCCATATACTGGACCATATGGTGGAAAATTTGAGAGTAACAAGCATGGGAACACAAATATAGCACTGGAAAAGCGAGCGGTTTCAATTGTTCATGAGTTCTTGACTTTGACCGTGGAGAAGATGGTGGAAGTAGAGAAGATCAGCCATTTCAGGAAATGGTTTGGCATTGAATTAAATGTAAGAGATCTATTCTTGGATCATCCTGGGATATTTTATCTGTCAACCAAGGGAAAGAGACATACCGTTTTTCTAAGAGAAGCATATGAGAGGGGATGTTTAATAGATCCAAATCCAGTGTATTCTGTAAGGAGAAAACTCCTATATTTAGTTGCGATGGGGCGTCGTGGTTTATCTCATAGTGGCTTGAGACAGAAGGCTGATCAAATTCAGAACGGAGACGGTGGCTTGCCTCCAGATAACAAGTGAATAAAGGACAACAAATGTTTCAAAGCTGTTTGATGTCTCTACATTGGGTGAGTTTATTTCGAACAGTATAAAGTAATTTGTGAAACACTGGCATCTATCTAAAAACATAAATGGGAGTGCTTTATTTTTCCAATGAAGTTATTTGAATACAAAATGCTGGAGGGACTAACACTTCACTATTAAGGTATTTTGATGTATTAGGGGGTTGGTAATTAGTTGCCAATATGAAATATCTTTCTTAAATTGGAGAATGCGTGTATTGCTGCATCTTTTTATAGACATGTCCATTCTCTCAGAGAAAGGCTGGAGAGCGTGGGAATTTAACCCTCCTGACTATGTCTCTAGCTACTGGTGAATGATTGATCAAGTTTTTAACCCAGCGAAATAGGACTTTATTTGAGATTTTCTTTTTTTTTAGTTCAACAATAATATTTGAGGATGGATATTTGAACCCAAGATGTTAATTACTGTGAGCTTCTTTGTTGTTGCAGAGGATCATGATGACTTGAACAAAGCTTAATTACATGTCTTCAAGGGGCCCCCATACATGCTTTCTTGGGGTATGTTTGTTTTTTTGGATAAGAACTTTTCAAAAACTCTGATATGATCCAGGATCTAGATTATATCAAAAGTAAAAGAATACAAGATAAGCCAAGTTTCGATAGGTTTTGGAACCTCCCCTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCATTCAATAACTCACTCAATAATTGGATGCCTCAAACCTAGGCTAACCCTCTCTATTTATAATAAAATACCCTAACTTACTCTCCAAGTAATTGCAACTTACTCCCCAAGTAATTGCTAACATACCCTTATATTATTCCTATTTCTACTAAGACCCAACCCTATCACTACCGGCCCCTAAAAAAATACACCTTGTCCTCAAGGTGTTGGTAAACAATAACTATGGAAAAAAAACAATTCTGAGTTTTTTTTTTGCGGCGGCAACGGCGGTGGCAATTGCGGCAGCGACGGCGGCAGTGGCAGCGACAGTAGTGGTAGTGGTGCGTCGATGGCAACGATGATGGTGGTGGTGGTGGCGACGGAGGTGATGGCAGCAGAGGTGACGGTGATGATGGCAACAGCGGCGGAGGTGGGGGCGACGGAGGTAGCGACGGCCGTGGTGGCAATAGTGACATCAGCGGTGGTGGCAAAGAAGAACGGAGGAGGTGGTGGCGGCGGCGACGGTGGCGGCGGTGGTGTCGAAACCCTAGCCGTCGTTTTTTCCAATTTAATTTCCTCTTTGATTTCTCTAAAACATCTTTTTAGGTCTTCTCTAAGACTTTGCAACTGTTCTTGAATTAAAAGAAGAAGTTCTCGATCCATCTCTACAACCAAGAATCGAACGGTTCTGATACCAATTGATATGATCCAGGATCTAGATTATATCAAAAGTAAAAGAATACAAGATAAGCCAAGTTTTGATAGGTCTTGGAACCTCCTCTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCACTCAATAACTCACTCAATAATTGGACGCCTCAAACCTAGGCTAACCCTCTCTATTTATAATAAAATACCCTAACTTACTCTCCAAGTAATTGCAACTTACTCCCCAAGTAATTGCTAACATACCTTTATATTATTCCTATTTCTACTAAGACCCAACCCTATCAAACTCCTTGTCTGTTTTTTGTATTAAACAACCACTGTTAACTACTCTTCAACCCTTCTATCAATCTCAAATTAAATCTTATTAAACTTAGCATCAAGTTTATCATTTAACCACTATTAATCTCAATTCTCAAACAAGTAGTGGATTACTCCACTACTATTAACTCCAATCCCCAAACAAGTAGTTAACTACTTCAAACTACTATTAACCACTTTATTCTCTTCCACTCCACTCCACTCTTTTCTACAAAAAACCAACACATTTTTCTTAATCAATTAATCTCGGGTTGCAGTTTGGAATATGATTATAGACTATAATGATAAAACAACGTGCAGTTTTTGTTATTTTATTTTCATTTAGAAGCCTGCGTTGCACATGTATTTTGCTAGCTTTCAAACTACAAGGAAGTGATGTTTAGTGCATTTTTAGGCCAAGAAGAGCATCGAATGACATGATGTATGAGAACACTAAATCCTCTCCCTCAAATGCCGTTGAATTAAATGATGTGCATTTTTAGACCCGTTTTATAACAATTTGGTTTTTGTTTTTTTTTTTTTTGGAAATATTGTACTGGTTTTCTTTAATTTTTCTACCATGAGTTTCAACCTTCTTAGAAAACAAAACAAGTTTTTGAAACAATTTTTTTAGTTTTCAAAATTTAGATTGGCTTTTGAAAACATATGTAAAAACTAGATAACAAAATAAGAAAACTTGTAAGTGGAAGTAGAGCACTTATAGGCTTAATTTTCAAAAACCAAATGGTTATCAAAATGGGCCTTTGTCCCACAATGCTTGCAATTAGAAGTCTTATGTTTAGATGCCATATTTGATTTTGCAGCTGCCTTTGGAGCAATTTTGCATGTCATATCTACTTCACTTCTTGGAATAACAGCAATCACAAAGGCTAATACAATTGCTGGTGCAGAAACTGTGCACAAGCTGGCTTCCCTTTCGCTTATAATTCTTTGAGCTTGTTATATTTTATTGTTTATGACTGGAAGAGGTAGTCATAGCCACTCCTACAACAAACCAATGGAGAAGATGGCGGTTGCTGGTCTTGTCCTTGTACCTGCTTTGTCTCCCTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCATCTTCCATGATTGTACTTGCTATCGTAGTGCTGCTATTTAGGTATTAATTCAATTGTATAGGGCATAAAACTTTCTTGTCTGTTGTACATTACGGAACTTCTTTTTTGTTTTGCGGAGAAAGAAACTAGCTTTTAGAAAGAAATGTGGAGGGAAGGAAACAAAAGCTGCCTA

mRNA sequence

CGATTCGTTTTCTCTCTCTTCCTCTTTCTCTCCCCGATTTTCCGACCAGCCTCGCCGGAGCTTCATTCCGCCAGTCGCCGTGGTCAGTCGTCCGTGTCTGAGGAGGTCGCCGTCACAAGCCCAGTTCGTCGCCCGTCGTTGAAGCTACCGTCTGGGTCTTCGCCGTGGTTGTGGGTTGCTTCTCAGCAGCCGGTTGGTTTGTGCCGTCGTCGGTTGGTTCGTCCGAGTGTGGGTTGTTTGTGTTGTCGTCGCCTAGCCATTTCTGTTCAGCTCGAGATCGCTGTGGGTTCGAGCTTGTGGTGCCGTCGCGAGTTTATGAGAAGCAGCCTCGTCGTCGCCGCCGGAGCTACTCTGAGGTGAGAGGTTTGTTTTTCAAAAGGGACATTAGTTTATGTTGTCTCACTCGTGACCTCAATGATGTGATATTTTTAAGGAGGGAACAAAGATTTTGAATGTGACATTAGTTTATGGGGCGGGGTAAGTCGAAGCCATACAGAAAACAGAATGTGTATTATATATCCATTTCCAAGTATTTTCTAAAGAACACCCTGGATTTCTCTTCAATGCTGAAGAATTTTGAATGTCGTATATTGGTCATTGCCTCAGACACTTCACTTAGAAAATGACCCTAGATTTCACTGTGAGAAGTGAAATGATCTTTGAGAAAACTATTCTGGAAATATTTCATCAAAATTAGTACTTAGATCATTGTATAAACTACTGTTGTGCTAATGCTGTGATTTAATTTGAAGCCCACGTAGTTTTTCGAGGTTTCTATATTTGTTTGTTCATGAAAGAAATGGGAACTCATATAGTTAGGTCCATTTCTAGAAGTTACCATCATCTCAATATTTTTGTTAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGTTAGAGATCCAACGTTTGAGAAATTTATGGATAATTACAAAAATCTTCTCAAAGTGGTTGCTGTTCAAGATCTTATCCTCGTTAATCCAAGGAATCAATCAGCATCTTTAGAATTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGTGCTTCCGCCTTCCTTCGCAAATACCCTCATATTTTTCACATATTCTATGATCCAAATAAGTCCCAGCCAATTTGCAAATTAACAGATACTGCCAGCCAAATATTTCACGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAAGTTGTTGACAGATTAGTCCGACTTTTATTAATGTCGAATTCTCAGAAGTTACCACTGCGTGCCATTTACAAGGTTTGGAGGGAGCTTGGCCTCCCCGACAATTTTGAGGACTCTGTGATATCCAAATACTCTCATATTTTTCAGCTCTGTGATGCTCTTGAACCAAATACTCATTTTCTGAAGTTGGTTGATCAGACTCCAAAAAATCATTTCAGAGCAGCTATTGAGGAATGGAGAGTTACCGAGTGTTGTAGAAAAGACTGCAATGTTGATGAGACAGAAATTCAGTATAGTTTTAAACATAGCTACCCTCCAGGAATGCGGTTGCAAAAGAACTTCAAGGCCAAGGTCAAGGAATGGCAAATGTGTCCATATACTGGACCATATGGTGGAAAATTTGAGAGTAACAAGCATGGGAACACAAATATAGCACTGGAAAAGCGAGCGGTTTCAATTGTTCATGAGTTCTTGACTTTGACCGTGGAGAAGATGGTGGAAGTAGAGAAGATCAGCCATTTCAGGAAATGGTTTGGCATTGAATTAAATGTAAGAGATCTATTCTTGGATCATCCTGGGATATTTTATCTGTCAACCAAGGGAAAGAGACATACCGTTTTTCTAAGAGAAGCATATGAGAGGGGATGTTTAATAGATCCAAATCCAGTGTATTCTGTAAGGAGAAAACTCCTATATTTAGTTGCGATGGGGCGTCGTGGTTTATCTCATAGTGGCTTGAGACAGAAGGCTGATCAAATTCAGAACGGAGACGGTGGCTTGCCTCCAGATAACAAGTGAATAAAGGACAACAAATGTTTCAAAGCTGTTTGATGTCTCTACATTGGAGGATCATGATGACTTGAACAAAGCTTAATTACATGTCTTCAAGGGGCCCCCATACATGCTTTCTTGGGCTGCCTTTGGAGCAATTTTGCATGTCATATCTACTTCACTTCTTGGAATAACAGCAATCACAAAGGCTAATACAATTGCTGGTGCAGAAACTGTGCACAAGCTGGCTTCCCTTTCGCTTATAATTCTTTGAGCTTGTTATATTTTATTGTTTATGACTGGAAGAGGTAGTCATAGCCACTCCTACAACAAACCAATGGAGAAGATGGCGGTTGCTGGTCTTGTCCTTGTACCTGCTTTGTCTCCCTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCATCTTCCATGATTGTACTTGCTATCGTAGTGCTGCTATTTAGGTATTAATTCAATTGTATAGGGCATAAAACTTTCTTGTCTGTTGTACATTACGGAACTTCTTTTTTGTTTTGCGGAGAAAGAAACTAGCTTTTAGAAAGAAATGTGGAGGGAAGGAAACAAAAGCTGCCTA

Coding sequence (CDS)

ATGAAAGAAATGGGAACTCATATAGTTAGGTCCATTTCTAGAAGTTACCATCATCTCAATATTTTTGTTAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGTTAGAGATCCAACGTTTGAGAAATTTATGGATAATTACAAAAATCTTCTCAAAGTGGTTGCTGTTCAAGATCTTATCCTCGTTAATCCAAGGAATCAATCAGCATCTTTAGAATTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGTGCTTCCGCCTTCCTTCGCAAATACCCTCATATTTTTCACATATTCTATGATCCAAATAAGTCCCAGCCAATTTGCAAATTAACAGATACTGCCAGCCAAATATTTCACGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAAGTTGTTGACAGATTAGTCCGACTTTTATTAATGTCGAATTCTCAGAAGTTACCACTGCGTGCCATTTACAAGGTTTGGAGGGAGCTTGGCCTCCCCGACAATTTTGAGGACTCTGTGATATCCAAATACTCTCATATTTTTCAGCTCTGTGATGCTCTTGAACCAAATACTCATTTTCTGAAGTTGGTTGATCAGACTCCAAAAAATCATTTCAGAGCAGCTATTGAGGAATGGAGAGTTACCGAGTGTTGTAGAAAAGACTGCAATGTTGATGAGACAGAAATTCAGTATAGTTTTAAACATAGCTACCCTCCAGGAATGCGGTTGCAAAAGAACTTCAAGGCCAAGGTCAAGGAATGGCAAATGTGTCCATATACTGGACCATATGGTGGAAAATTTGAGAGTAACAAGCATGGGAACACAAATATAGCACTGGAAAAGCGAGCGGTTTCAATTGTTCATGAGTTCTTGACTTTGACCGTGGAGAAGATGGTGGAAGTAGAGAAGATCAGCCATTTCAGGAAATGGTTTGGCATTGAATTAAATGTAAGAGATCTATTCTTGGATCATCCTGGGATATTTTATCTGTCAACCAAGGGAAAGAGACATACCGTTTTTCTAAGAGAAGCATATGAGAGGGGATGTTTAATAGATCCAAATCCAGTGTATTCTGTAAGGAGAAAACTCCTATATTTAGTTGCGATGGGGCGTCGTGGTTTATCTCATAGTGGCTTGAGACAGAAGGCTGATCAAATTCAGAACGGAGACGGTGGCTTGCCTCCAGATAACAAGTGA

Protein sequence

MKEMGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK
Homology
BLAST of Sed0011629 vs. NCBI nr
Match: XP_022157354.1 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 702.6 bits (1812), Expect = 2.0e-198
Identity = 338/397 (85.14%), Postives = 365/397 (91.94%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG HIVRSI++ YHHL++ VRCKTTSSQYVASR RDPTFEK MD YKN LKVVAVQDLIL
Sbjct: 1   MGPHIVRSIAKRYHHLSMVVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAVQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKSQP C+LTD A+ IF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSQPFCRLTDAATLIF 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
           HEEADAINASLPQVVDRLVRLL MSNS+ LPLRAIYKVWRELGLPD+FEDSVI K+SHIF
Sbjct: 121 HEEADAINASLPQVVDRLVRLLSMSNSKMLPLRAIYKVWRELGLPDDFEDSVIYKHSHIF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTHFLKLVD  P+NHFRAA+E+WRVTECC++DC +DETEI+YSFKHS PPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFRAAVEKWRVTECCKEDCTIDETEIKYSFKHSCPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+KNFKAKVKEWQ CPYTGPY G FE NK+GNT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKNFKAKVKEWQRCPYTGPYEGIFE-NKYGNTSMALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
           KLL LV MGRRGLSHSGLRQK +QI + DG LP DNK
Sbjct: 361 KLLDLVVMGRRGLSHSGLRQKVNQINSEDGDLPLDNK 396

BLAST of Sed0011629 vs. NCBI nr
Match: XP_038879589.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038879590.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])

HSP 1 Score: 698.7 bits (1802), Expect = 2.8e-197
Identity = 332/392 (84.69%), Postives = 363/392 (92.60%), Query Frame = 0

Query: 3   EMGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLI 62
           +MG HI RS+++ YHHLN+ VRCKTTSSQYVASR RDPTFEK MD YKNLLKVVA+QDLI
Sbjct: 9   KMGPHIFRSLAKRYHHLNMVVRCKTTSSQYVASRARDPTFEKLMDKYKNLLKVVAIQDLI 68

Query: 63  LVNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQI 122
           L NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+Q+
Sbjct: 69  LANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQL 128

Query: 123 FHEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHI 182
           F EEADAINASLP+VVDRLVRLL MSNS+ +PLRAIYKVWRELGLPDNFEDSVISKYSHI
Sbjct: 129 FSEEADAINASLPEVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDNFEDSVISKYSHI 188

Query: 183 FQLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPG 242
           FQLCDA EPNTHFLKL D  P++HFRAA+EEWRVT+CC++DC+VDETEIQYSFKHSYPPG
Sbjct: 189 FQLCDAHEPNTHFLKLADHIPRHHFRAAVEEWRVTQCCKEDCSVDETEIQYSFKHSYPPG 248

Query: 243 MRLQKNFKAKVKEWQMCPYTGPYGGKFE-SNKHGNTNIALEKRAVSIVHEFLTLTVEKMV 302
           MRL+KNFKAKVKEWQ CPY GPY G  + SNK+ NT+IALEK+AVSIVHEF+TLTVEKMV
Sbjct: 249 MRLKKNFKAKVKEWQKCPYIGPYEGTLDNSNKYKNTSIALEKQAVSIVHEFMTLTVEKMV 308

Query: 303 EVEKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSV 362
           E+EKISHFRKWFG+ELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+V
Sbjct: 309 EIEKISHFRKWFGVELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTV 368

Query: 363 RRKLLYLVAMGRRGLSHSGLRQKADQIQNGDG 394
           RRKLL LVAMGRRGLSHSG RQKADQ+QN DG
Sbjct: 369 RRKLLDLVAMGRRGLSHSGSRQKADQVQNEDG 400

BLAST of Sed0011629 vs. NCBI nr
Match: XP_008451076.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 691.4 bits (1783), Expect = 4.5e-195
Identity = 332/393 (84.48%), Postives = 355/393 (90.33%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG HI RSI   Y HLN+FVRCK TSSQYVASR RDPTFEK MD YKN LKVVA+QDLIL
Sbjct: 1   MGPHIFRSIGERYLHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+QIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
            EEADAINASLPQVVDRLVRLL MSNS+ +PLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTH+LKLVD  P+N FRAA+EEWRV +CC +DC VDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+K FKAKVKEWQ CPYTGPY G  +SNK+ NT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKIFKAKVKEWQQCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLP 397
           KLL LVAMGRRGLS S LRQKADQI N DGG P
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGGFP 393

BLAST of Sed0011629 vs. NCBI nr
Match: XP_011660083.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hypothetical protein Csa_006877 [Cucumis sativus])

HSP 1 Score: 686.0 bits (1769), Expect = 1.9e-193
Identity = 329/393 (83.72%), Postives = 356/393 (90.59%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG HI RSI+  YHHLN+FVRCK TSSQYVASR RDPTFEK MD YK+ LKVVA+QDLIL
Sbjct: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+QIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
            EEADAINASLPQVVDRLVRLL MSNS+ +PLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTH+LKLVD  P+N FRAA+EEWRV + C++DC VDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+K FKAKV+EWQ CPYTGPY G  +SNK+ NT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLP 397
           KLL LVAMGRRGLS S LRQKADQI N DG  P
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFP 393

BLAST of Sed0011629 vs. NCBI nr
Match: XP_023516230.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 684.1 bits (1764), Expect = 7.2e-193
Identity = 332/397 (83.63%), Postives = 354/397 (89.17%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG HI RSIS+ YH+LN+ VRCKTTSSQYVASR RDPTFEK MD YKNLLKVVAVQDLIL
Sbjct: 1   MGPHIFRSISKRYHYLNMVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SLEFLSRLSQKLHLNRGA++FLRKYPHIFHIFYDPNK+QP CKLTDTA  I 
Sbjct: 61  ANPRNQSVSLEFLSRLSQKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIV 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
            EEADAI+ASLPQVVDRLVRLL M+NS+ LPLRAIYKVWRELGLPDNFED VISK SHIF
Sbjct: 121 CEEADAIHASLPQVVDRLVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTHFLKLVD  P+NHFRAA++EWRVT+CC+   +VDETEI+YSFKHSYPPGM
Sbjct: 181 QLCDAYEPNTHFLKLVDDIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+K FKAKVKEWQ CPYTGPY G  +SNK+GNT IALEKRAVSI+HEF+TLTVEKMVEV
Sbjct: 241 RLRKTFKAKVKEWQRCPYTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
           KLL  V MGRRGL  S LRQK DQI N DG  P  NK
Sbjct: 361 KLLDFVDMGRRGLPPSSLRQKVDQIHNEDGDFPLGNK 397

BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.4e-58
Identity = 133/349 (38.11%), Postives = 200/349 (57.31%), Query Frame = 0

Query: 36  RVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHL---NRGASAF 95
           RVRD  ++ +M+  K + KVV    LIL  P N + ++  L  L+++L L        AF
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 96  LRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQK 155
           L K+PH+F I+  P +    C+LT  A      E +A+   +P  V RL +L++MSN+ +
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 156 LPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIE 215
           + L  +     E GLP++FE SVI K+   F+L D  E    ++++V++ P N    AIE
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 216 EWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPY----GGK 275
             RV E   +   +D  ++++SF  ++PPG ++ K F+  V +WQ  PY  PY    G  
Sbjct: 226 --RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285

Query: 276 FESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPG 335
             S +  N    LEKR+V+ +HE L+LTVEK + +E+I+HFR    +   +++  L H G
Sbjct: 286 LRSMEAQN---RLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345

Query: 336 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRR 375
           IFY+ST+   GK HTVFLRE Y+RG L++PN VY  RR+L  LV M  R
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPR 387

BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-32
Identity = 96/347 (27.67%), Postives = 178/347 (51.30%), Query Frame = 0

Query: 30  SQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGA 89
           +Q    R ++  F+  +   K L  V+ ++++++ NP ++  SL  L R  + L L R  
Sbjct: 57  AQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGLTRKR 116

Query: 90  S--AFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLM 149
              A L+++P +F +  +   S    +LT  A +++ +E    N S    V +L +LL+M
Sbjct: 117 RLIALLKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMM 176

Query: 150 SNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDA-LEPNTHFLKLVDQTPKNH 209
           S  +++ +  I  +  +LGLP  F D++  +Y   F++      P         +   + 
Sbjct: 177 SQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSA 236

Query: 210 FRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYG 269
              A EE R  E   ++  +D   ++++ +   P G++L +    +V +++  PY  PY 
Sbjct: 237 AEVAEEENRAREEQERNLIIDR-PLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYISPY- 296

Query: 270 GKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDH 329
             F   + G+     EK A  +VHE L+LT+EK   V+ ++HFR+ F    ++R + + H
Sbjct: 297 SDFSHLRSGSAE--KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 356

Query: 330 PGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGR 374
           P +FY+S KG R +VFLREAY+   L++ + +  ++ K+  LVA+ R
Sbjct: 357 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPR 396

BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.9e-32
Identity = 105/343 (30.61%), Postives = 174/343 (50.73%), Query Frame = 0

Query: 36  RVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHL--NRGASAFL 95
           R ++ TF+  +   K L  V+ ++  ILV+  ++  SL  L +  + L L   R   A L
Sbjct: 78  RRKELTFDSVVQRDKKLKLVLNIRK-ILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALL 137

Query: 96  RKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQKL 155
           RKYP +F I  +   S    K+T  A +++ +E    N     +V +L +L++MS  +++
Sbjct: 138 RKYPGVFEIVEEGAYSLRF-KMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRI 197

Query: 156 PLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAA--- 215
            L  I  +  +LGLP  F D++  +Y   F++     P    L+L    P+    AA   
Sbjct: 198 LLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPT--PRGPALELTHWDPELAVSAAELS 257

Query: 216 IEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYGGKFE 275
            ++ R  E   ++  +D        K   P G+ L K+   K+ +++   Y  PY  K  
Sbjct: 258 EDDNRTRESEERNLIIDRPPKFNRVK--LPRGLNLSKSETRKISQFRDMQYISPY--KDF 317

Query: 276 SNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIF 335
           S+    T +  EK A  ++HE L+LT EK   V+ ++HFR+ F     +R + + HP +F
Sbjct: 318 SHLRSGT-LEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLF 377

Query: 336 YLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGR 374
           Y+S KG+R +VFLREAY    LID +P+  V+ K+  LV++ R
Sbjct: 378 YVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411

BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.9e-32
Identity = 100/349 (28.65%), Postives = 179/349 (51.29%), Query Frame = 0

Query: 30  SQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGA 89
           +Q    R ++  F+  +   K L  V+ ++++++  P ++  SL  L R  + L L R  
Sbjct: 51  AQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQP-DRVMSLRELGRFRRDLGLTRKR 110

Query: 90  S--AFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLM 149
              A LR++P +F +  +   S    +LT  A +++ +E    N S    V +L +LL+M
Sbjct: 111 RLIALLRRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMM 170

Query: 150 SNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHF 209
           S  +++ +  +  +  +LGLP  F D+V  +Y   F++          L+L    P+   
Sbjct: 171 SQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRV--VRMDRGPALELTHWDPELAV 230

Query: 210 RA---AIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGP 269
            A   A EE R  E   ++  +D   ++++ +   P G++L +    ++  ++  PY  P
Sbjct: 231 SAAELAEEESRAREAEERNLIIDR-PLKFN-RVRLPKGLKLTRGEARRIARFKEMPYISP 290

Query: 270 YGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFL 329
           Y   F   + G+     EK A  +VHE L+LTVEK   V+ ++HFR+ F    ++R + +
Sbjct: 291 Y-ADFSHLRSGSDE--KEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMII 350

Query: 330 DHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGR 374
            HP +FY+S KG R +VFLREAY+   L++ N +  ++ K+  LVA+ R
Sbjct: 351 RHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPR 390

BLAST of Sed0011629 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.1e-29
Identity = 102/338 (30.18%), Postives = 165/338 (48.82%), Query Frame = 0

Query: 38  RDPTFEKFMDNYKNLLK------VVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGASA 97
           RDP F    DN +++L+      VV++++ I+  P N+   +  +S+ +++  ++   + 
Sbjct: 33  RDPYF----DNIEHILRSSQLKSVVSLKNCIVQEP-NRCIPISAISKKTRQFDVSTKIAH 92

Query: 98  FLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQ 157
           FLRK+P IF  F  P  + P  +LT  A+++  +E      S   + DRL +L+LMS   
Sbjct: 93  FLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDN 152

Query: 158 KLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAI 217
            LPL  +  +   LGLPD++           F+  D +E     L  VD    +   + +
Sbjct: 153 VLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVD-MEDGVKGL-AVDYNGGDKVLSVL 212

Query: 218 EEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYGGKFES 277
           ++    +  R + +++E E    F      G RL+   +  + E+Q  PY  PY     S
Sbjct: 213 QK-NAMKKRRGEVSLEEIE----FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDD--YS 272

Query: 278 NKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFY 337
               +++IA EKR V  +HE L L VE   E +K+   +K FG+   V   F  HP IFY
Sbjct: 273 CLDPSSDIA-EKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFY 332

Query: 338 LSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLV 370
           LS K K  T  LRE Y     ++ +PV  VR+K + L+
Sbjct: 333 LSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355

BLAST of Sed0011629 vs. ExPASy TrEMBL
Match: A0A6J1DW95 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111024077 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 9.5e-199
Identity = 338/397 (85.14%), Postives = 365/397 (91.94%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG HIVRSI++ YHHL++ VRCKTTSSQYVASR RDPTFEK MD YKN LKVVAVQDLIL
Sbjct: 1   MGPHIVRSIAKRYHHLSMVVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAVQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKSQP C+LTD A+ IF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSQPFCRLTDAATLIF 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
           HEEADAINASLPQVVDRLVRLL MSNS+ LPLRAIYKVWRELGLPD+FEDSVI K+SHIF
Sbjct: 121 HEEADAINASLPQVVDRLVRLLSMSNSKMLPLRAIYKVWRELGLPDDFEDSVIYKHSHIF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTHFLKLVD  P+NHFRAA+E+WRVTECC++DC +DETEI+YSFKHS PPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFRAAVEKWRVTECCKEDCTIDETEIKYSFKHSCPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+KNFKAKVKEWQ CPYTGPY G FE NK+GNT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKNFKAKVKEWQRCPYTGPYEGIFE-NKYGNTSMALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
           KLL LV MGRRGLSHSGLRQK +QI + DG LP DNK
Sbjct: 361 KLLDLVVMGRRGLSHSGLRQKVNQINSEDGDLPLDNK 396

BLAST of Sed0011629 vs. ExPASy TrEMBL
Match: A0A1S3BQP0 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.2e-195
Identity = 332/393 (84.48%), Postives = 355/393 (90.33%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG HI RSI   Y HLN+FVRCK TSSQYVASR RDPTFEK MD YKN LKVVA+QDLIL
Sbjct: 1   MGPHIFRSIGERYLHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+QIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
            EEADAINASLPQVVDRLVRLL MSNS+ +PLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTH+LKLVD  P+N FRAA+EEWRV +CC +DC VDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+K FKAKVKEWQ CPYTGPY G  +SNK+ NT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKIFKAKVKEWQQCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLP 397
           KLL LVAMGRRGLS S LRQKADQI N DGG P
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGGFP 393

BLAST of Sed0011629 vs. ExPASy TrEMBL
Match: A0A0A0LWZ0 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 9.2e-194
Identity = 329/393 (83.72%), Postives = 356/393 (90.59%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG HI RSI+  YHHLN+FVRCK TSSQYVASR RDPTFEK MD YK+ LKVVA+QDLIL
Sbjct: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SL+FLSRLSQKLHLNRGA +FLRKYPHIFHIFYDPNKS P CKLTDTA+QIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
            EEADAINASLPQVVDRLVRLL MSNS+ +PLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTH+LKLVD  P+N FRAA+EEWRV + C++DC VDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+K FKAKV+EWQ CPYTGPY G  +SNK+ NT++ALEKRAVSIVHEF+TLTVEKMVEV
Sbjct: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLP 397
           KLL LVAMGRRGLS S LRQKADQI N DG  P
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFP 393

BLAST of Sed0011629 vs. ExPASy TrEMBL
Match: A0A6J1JGE7 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111485476 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.9e-192
Identity = 328/397 (82.62%), Postives = 351/397 (88.41%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG  I RSI + YH+LN+FVRCKTTSSQYVASR RDPTFEK MD YKNLLKVVAVQDLIL
Sbjct: 1   MGPQIFRSIPKRYHYLNMFVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SLEFL RLSQKLHLNRGA++FLRKYPHIFHIFYDPNK+QP CKLTDTA  I 
Sbjct: 61  ANPRNQSVSLEFLLRLSQKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIV 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
            EEADAINASLPQVV RLVRLL MSNS+ LPLRAIYKVWRE GLPDNFED VISK SHIF
Sbjct: 121 CEEADAINASLPQVVGRLVRLLSMSNSKMLPLRAIYKVWREFGLPDNFEDCVISKNSHIF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTHFLKLVD  P+NHF+AA++EWRVT+CC+  C +DETEI+YSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFQAAVDEWRVTQCCKDGCTIDETEIKYSFKHSYPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+K FKAKVK+WQ CPYTGPY G  +SNK+GNT IALEKRAVSI+HEF+TLTVEKMVEV
Sbjct: 241 RLRKTFKAKVKDWQRCPYTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
           KLL  V MGRRGL  S LRQK DQI N DG  P DNK
Sbjct: 361 KLLDFVDMGRRGLPPSNLRQKVDQIHNEDGDFPLDNK 397

BLAST of Sed0011629 vs. ExPASy TrEMBL
Match: A0A6J1H9C9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC111461311 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.9e-192
Identity = 330/397 (83.12%), Postives = 349/397 (87.91%), Query Frame = 0

Query: 4   MGTHIVRSISRSYHHLNIFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLIL 63
           MG HI RSI + Y +LN+ VRCKTTSSQYVASR RDPTFEK MD YKNLLKVVAVQDLIL
Sbjct: 1   MGPHIFRSIPKRYQYLNMVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLIL 60

Query: 64  VNPRNQSASLEFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIF 123
            NPRNQS SLEFLSRLSQKLHLNRGA++FLRKYPHIFHIFYDPNK+QP CKLTDTA  I 
Sbjct: 61  ANPRNQSVSLEFLSRLSQKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIV 120

Query: 124 HEEADAINASLPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIF 183
            EEADAINASLP VVDRLVRLL MSNS+ LPLRAIYKVWRELGLPDNFED VISK SHIF
Sbjct: 121 CEEADAINASLPLVVDRLVRLLSMSNSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIF 180

Query: 184 QLCDALEPNTHFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGM 243
           QLCDA EPNTHFLKLVD  P+NHFRAA++EWRVT+CC+  C VDETEI+YSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFRAAVDEWRVTQCCKDGCTVDETEIKYSFKHSYPPGM 240

Query: 244 RLQKNFKAKVKEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEV 303
           RL+K FKAKVKEWQ CPYTGPY G  + NKHGNT IALEKR VSI+HEF+TLTVEKMVEV
Sbjct: 241 RLRKTFKAKVKEWQRCPYTGPYEGTLDGNKHGNTAIALEKRTVSIIHEFMTLTVEKMVEV 300

Query: 304 EKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRR 363
           EKISHFRKWFGIELN+RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVY+VRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 364 KLLYLVAMGRRGLSHSGLRQKADQIQNGDGGLPPDNK 401
           KLL  V MGRRGL  S LRQK DQI   DG  P DNK
Sbjct: 361 KLLDFVDMGRRGLPPSSLRQKVDQIHIEDGDFPLDNK 397

BLAST of Sed0011629 vs. TAIR 10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 505.0 bits (1299), Expect = 5.6e-143
Identity = 253/371 (68.19%), Postives = 292/371 (78.71%), Query Frame = 0

Query: 21  IFVRCKTTSSQYVASRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQ--SASLEFLSR 80
           I VR  TTS+QYVASR RDP FEK MD YKNLLKV+A+QDL L NP     S S+EFLSR
Sbjct: 19  INVRSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSR 78

Query: 81  LSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVV 140
           LSQKLHLNRGA++FLRKYPHIFH+ YDP K++P C+LTD A +I  +EA AI A+L  VV
Sbjct: 79  LSQKLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVV 138

Query: 141 DRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKL 200
           DRLVRLL MS S+ +PLRA++KVWRELGLPD+FEDSVISK  H+F+L D  E NTH L+L
Sbjct: 139 DRLVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILEL 198

Query: 201 VDQTPKN-HFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQ 260
           V +  K   F AA+E+WRV EC ++DC+VD TEIQ+SFKHSYPPGMRL K FKAKVKEWQ
Sbjct: 199 VQEEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQ 258

Query: 261 MCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIEL 320
             PY GPY       K  +  + +EKRAV+I HEFL LTVEKMVEVEKISHFRK FGI+L
Sbjct: 259 RLPYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDL 318

Query: 321 NVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRR-GL 380
           N+RDLFLDHPG+FY+STKGKRHTVFLREAYERG LIDPNPVY  RRKLL LV +GR   L
Sbjct: 319 NIRDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAAL 378

Query: 381 SHSGLRQKADQ 388
           S SG    ++Q
Sbjct: 379 SESGNTSMSEQ 389

BLAST of Sed0011629 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 258.5 bits (659), Expect = 9.1e-69
Identity = 139/340 (40.88%), Postives = 200/340 (58.82%), Query Frame = 0

Query: 35  SRVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGASAFLR 94
           +R RD   +K +   + L  ++ +  L+    R    SL+ +SR    + LN    AF+ 
Sbjct: 67  NRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIG 126

Query: 95  KYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQKLP 154
           KYPH F IF  P      CK+T+    +  EE + +       V R+ +LLL+S    L 
Sbjct: 127 KYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLR 186

Query: 155 LRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIEEW 214
           + A+  + +ELGLP++F DS+++KYS  F+L D        L+LVD+  ++   A +EEW
Sbjct: 187 VHALRLIRKELGLPEDFRDSILAKYSSEFRLVD-----LETLELVDRDDESLCVAKVEEW 246

Query: 215 RVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPYGGKFESNKH 274
           R  E   K  +  ET   Y+F    P G +++K F+ ++K WQ  PY  PY  K  S   
Sbjct: 247 REVEYREKWLSKFET--NYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEISRGL 306

Query: 275 GNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFYLST 334
                  EKR V+++HE L+LTVEKMVEVE+++HFRK  GIE+NVR++ L HPGIFY+ST
Sbjct: 307 ER----FEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVST 366

Query: 335 KGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRR 375
           KG   T+FLREAY +GCLI+PNP+Y+VRRK+L LV +  R
Sbjct: 367 KGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTR 395

BLAST of Sed0011629 vs. TAIR 10
Match: AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-64
Identity = 130/301 (43.19%), Postives = 183/301 (60.80%), Query Frame = 0

Query: 74  EFLSRLSQKLHLNRGASAFLRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINAS 133
           + +SR    + LN    AF+ KYPH F IF  P      CK+T+    +  EE + +   
Sbjct: 21  KLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVREC 80

Query: 134 LPQVVDRLVRLLLMSNSQKLPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNT 193
               V R+ +LLL+S    L + A+  + +ELGLP++F DS+++KYS  F+L D      
Sbjct: 81  EVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVD-----L 140

Query: 194 HFLKLVDQTPKNHFRAAIEEWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKV 253
             L+LVD+  ++   A +EEWR  E   K  +  ET   Y+F    P G +++K F+ ++
Sbjct: 141 ETLELVDRDDESLCVAKVEEWREVEYREKWLSKFET--NYAFPIHLPTGFKIEKGFREEL 200

Query: 254 KEWQMCPYTGPYGGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWF 313
           K WQ  PY  PY  K  S          EKR V+++HE L+LTVEKMVEVE+++HFRK  
Sbjct: 201 KNWQRVPYVKPYDRKEISRGLER----FEKRVVAVIHELLSLTVEKMVEVERLAHFRKDL 260

Query: 314 GIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGR 373
           GIE+NVR++ L HPGIFY+STKG   T+FLREAY +GCLI+PNP+Y+VRRK+L LV +  
Sbjct: 261 GIEVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKT 310

Query: 374 R 375
           R
Sbjct: 321 R 310

BLAST of Sed0011629 vs. TAIR 10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-59
Identity = 133/349 (38.11%), Postives = 200/349 (57.31%), Query Frame = 0

Query: 36  RVRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHL---NRGASAF 95
           RVRD  ++ +M+  K + KVV    LIL  P N + ++  L  L+++L L        AF
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 96  LRKYPHIFHIFYDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQK 155
           L K+PH+F I+  P +    C+LT  A      E +A+   +P  V RL +L++MSN+ +
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 156 LPLRAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIE 215
           + L  +     E GLP++FE SVI K+   F+L D  E    ++++V++ P N    AIE
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 216 EWRVTECCRKDCNVDETEIQYSFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPY----GGK 275
             RV E   +   +D  ++++SF  ++PPG ++ K F+  V +WQ  PY  PY    G  
Sbjct: 226 --RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285

Query: 276 FESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPG 335
             S +  N    LEKR+V+ +HE L+LTVEK + +E+I+HFR    +   +++  L H G
Sbjct: 286 LRSMEAQN---RLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345

Query: 336 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMGRR 375
           IFY+ST+   GK HTVFLRE Y+RG L++PN VY  RR+L  LV M  R
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPR 387

BLAST of Sed0011629 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 152.5 bits (384), Expect = 7.1e-37
Identity = 110/347 (31.70%), Postives = 172/347 (49.57%), Query Frame = 0

Query: 37  VRDPTFEKFMDNYKNLLKVVAVQDLILVNPRNQSASLEFLSRLSQKLHLNRGASAFLRKY 96
           V++   +  +D   +L     ++D I  +P     + + ++   + L L      FLR+Y
Sbjct: 36  VKNKNLDHVIDTETDLKAACILKDAIKRSPTG-FLTAKSVADWQKLLGLTVPVLRFLRRY 95

Query: 97  PHIFHIF-YDPNKSQPICKLTDTASQIFHEEADAINASLPQVVDRLVRLLLMSNSQKLPL 156
           P +FH F +    S P  KLTDTA  +  +E     +     V+RL R+L+M  S+ + L
Sbjct: 96  PTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRSKTVSL 155

Query: 157 RAIYKVWRELGLPDNFEDSVISKYSHIFQLCDALEPNTHFLKLVDQTPKNHFRAAIEEWR 216
           R+++ +  +LGLPDN+E +++ KY   F    A   N   LKLV    +  F A  +   
Sbjct: 156 RSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNP-CLKLVKWRDEFAFSALQKR-- 215

Query: 217 VTECCRKDCNVDETEIQY----------SFKHSYPPGMRLQKNFKAKVKEWQMCPYTGPY 276
                 +D +V   E +Y          +F  S+P G   QK  KA + E+Q  PY  PY
Sbjct: 216 -----NEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPY 275

Query: 277 GGKFESNKHGNTNIALEKRAVSIVHEFLTLTVEKMVEVEKISHFRKWFGIELNVRDLFLD 336
                SN    +++ +EKRAV+++HE L+LT+ K  +   +   R    I      LF  
Sbjct: 276 DD--PSNIDPESDL-MEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTR 335

Query: 337 HPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYSVRRKLLYLVAMG 373
           +PGIFYLS K K  TV L+E Y RG L+DP+P+  +R K  +++  G
Sbjct: 336 YPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTG 370

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157354.12.0e-19885.14LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia][more]
XP_038879589.12.8e-19784.69protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038879590.1 protein ... [more]
XP_008451076.14.5e-19584.48PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
XP_011660083.11.9e-19383.72protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hypothetical p... [more]
XP_023516230.17.2e-19383.63protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q689D62.4e-5838.11Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q65XL51.8e-3227.67Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
A0MFS53.9e-3230.61Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
B6TTV83.9e-3228.65Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q9ZUZ63.1e-2930.18Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A6J1DW959.5e-19985.14LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia ... [more]
A0A1S3BQP02.2e-19584.48protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4... [more]
A0A0A0LWZ09.2e-19483.72PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 S... [more]
A0A6J1JGE73.9e-19282.62protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111485476 ... [more]
A0A6J1H9C93.9e-19283.12protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC11146131... [more]
Match NameE-valueIdentityDescription
AT1G06440.15.6e-14368.19Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.29.1e-6940.88Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.11.0e-6443.19Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G33495.11.7e-5938.11Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G58520.17.1e-3731.70Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 37..374
e-value: 4.5E-113
score: 377.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..400
NoneNo IPR availablePANTHERPTHR31476:SF15OS04G0618900 PROTEINcoord: 9..385
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 9..385

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0011629.1Sed0011629.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding