
Sed0011600 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAACTGGTTGCTATTATTTCATTTTCAACTCTCCAACTGGGCCAAGTGGTGTATATTCAGTCAAAGAACAACTCAGAATCACAAATCTGTTCATACTCAAGAAAACATGTAAATGCAATTATGTAAATAATCTCCCTCCACCCTCCATATGTGATGTTGACTTCAATTTTCAATTTGAATGATGAACATGGTTGACCCAACTCTTTCAACTTAGCTGTCTTCCTTTTGTTTTTCATGATTGATGAATGGAAAACTCTTTAAAAGATCAGTTTCCAAGCAAACAAGGAACATAAACATATTGCAAATTCATCTTTGAGTAGATATTTTTCTCTGCTAAAGAACAGATATGGATAGAAATGCACAATCTGCTCCAAGCATGTATCAAGCAGATACAGCCAAGGGGAATGATTGGAGTTCTGGATTGTTTGATTCCCATGAAGATGAGAAAAAAGGTTGGTTTTTGTAATAATTTGGTTGATTGTTTGTAGTTTCTTTTTGCTTTGAAACAAGAAACAAACTTTTCATTAATATGATGAATGGAACTTCTCATTGATACAATGATTTTTTGTAGTTTCTAAGGTTGTTTATGCTTTGCAATATTGTTTTTATGTTTTTCTATGAGTGCGTTTTTTTCTATATGCGTGAGTGTTCAGGTCAGTTTAAGTGCACAACGACTATTTCATAGGACAGATTGCATGACTCTACAACATTTAGTTTGCCTGTTAAGGGATTTTCTATGTGTTTTAAACTTGTCTATATAGAGTTTTTGCTTCTTTGAGATTGATAGTTTTATCCAACTCTTCCAACTTTGTTGTACATGATTGGTGAATGGAATAATACAATTGAGGTGGTGGGGATTTTTCTCATCGAAAACTCCTTAAAACACAGTTTCCGTCAAAATTAGCATAACTCTAGTGACATCGTGTACGACCTAATAATGATTAGGTAACAGATTCGAATTTTTCCTCCTCCAAATGTTGATGAATAAAAAAAAAAACACCAGAGGCACAAAAACATATTGCAAATTCATCTTTGAGTATAAACTTTTCTCTGCTAAAGAACAGATATGGACAGAAATGCTTAATCTGCTGAACCTGAATTTCTCAGGTCCAAGCAAACATCAAGCAAATACATCTAACCCAGGCGCTAATAATGCTGAAGCTGAGTTCTCTGGTCCAACTATGCATCAAACAAATACTGTCAGGGGAACTATTTGGAGCACTGGATTGTTTGATTGCCATGAAGATGAGACAAATGGTTAGTTTTTGTAAATAATTTGGTTGGGGTGTGTTGTGTATCTTTCTAAGGTTTCCTTTGTGATTTGCAACATTGTTTTAATGTTTTTTTTTTGTTGTGTGTTTTGAACTTGTCTACATGAACTTTTTTGCTTCTTTGAGATACATAATTTTATCCAACACTTAGGTAGTTAACTGTTCAAGCCCCCAAGGGGTGATACTCTTGACTAATGCCTGCAGTTTTTGAGTAATACCTATCTGTTGGCTAAGGTTTGTGTGTTCGAATCTTCGCGCGTGAGTGTTTGAATCGTCGAGCGAGCTTAATATTAAAACTTTTGATGTCTCTAAAGTCTAGGTCTTGAGACAGAGGCAAGCTTTTCTCAAATCGAAATGTAGTTAGTTGTTGAAATTATAAAACTTTTGTCCACTACCTTTTGAAGTTATGAATGCTTATGACTCGAAGAGTTCAATATAATGCCAACAAAAGCTGATCTCAACTGACATGATGTATTGCCTGATAACCAAGAGGTTACAGATTCAAATCCCGCATCCCAATTGTTGTAATGCAACAAAACAAGATCCCAATATAATGTGTGGTTTTATATTGAGAGTTGATCCCATTTTTTACCTATTACTCCAAGAAGCACCCAACAGTTTAGTTTGGCTAGCCTGTCCGTGTCTAACGTGTTGTCGGTGTCATGTTTGTATGGCAGCGATTATGACAGCGTTCCTACCGTGTGTGACATTCGGACAGATTGCAGAAGTGATGGATGAAGGAGAAATGAGTAAGAGCTCTCATAAATTACATAGAATGTTATATATTTGTGATACTAATGATATAGCATTGGATTGAATTGTTTAGGTTGTCCTTTGGGGAGTCTTATATATGGTCTAATGATGCCTGCTTTGTGCTCTCAATGGCTGATGGGCTCAACATACAGAACAAGGCTGAGACAGAGATATAATTTAGTAGAAGCTCCATATACTGATATAATTTCTCATGTCTTTTGCTCATGTTGCTCACTTTGCCAAGAGTTTAGAGAGCTCAAAACGAGAGGACTTGACCCTTCTTTAGGTACTTATAATTCATTCTCTTTCTATCTATATATATTAACCGAAGAAATCATCGAGGAACTCTTCTTTAGGTACTGATAAATGTGTAAGCCCGTCTGATAACCATTTGGTTTTTATTTTTTTATTTTAAAATTTAAGCTTGTTATCACTCAAATTGCCTATCAAAGATTTCATCTCCCTTGAAAAAGTATTTTAATTCCAACTAAATTTCTAAAACTAAAACAAGTTTTCGGAGGCTTTATTTTTATTTTTATTTTTTCAGTTTTCACTTTTTTTTCTTTAATATATACGTAAAATGTAGATATCAAGTAAGCTTAATTTTCAAAACAAAATGCATATCACAGGGACGTTGGTTATAAGTTTGTGAAAATTAAACTTTTGAACATTACTTTCACACGTCAATTTCATTTTTTTGTTTTGTATCTTTTAAAATATCATGAATTAGTCTAATGGTTAATTAAGAATTTTATGAATTATAAAATACCCAAAAGGAATGAGTTTAATCTATAGTGTCTAACTTTTTAAAAATTAATTTTTTTGAGTTTTTTTAATAAACTAAATATAATAGCCAAGGTACTCCAAACTAGTCAAAACATTCATGAATATAAAAATAGGTAATTGTTCCTTTAAGCTTCGTTTGGTTAGTCGTTTGGAATCCGGGGAATTTGAAACCGTTGTTTGGCAAATATAAAAATTGTGGAATTTGATTATGGAGGTTTGGAATCTGGAGATTTGAAAACTTAAACAAACCAAACAACATTCTTTATTTTGGAGTATCAATAAATCAAACCAAACACCGTAATCAAAATTTCGAAGAATTTACTTATGGTACTGTATTCCAAGAAATCCAGATTCTGAGAAATCTGAATTCCAGTCCGCAAACCAAACAAGTCTTTAATGGATTAAGAACTTGGAAAAATATGTTGAATTTTGTTAATGGCAAGTTAGTGGTTTTTTGAATTATTGTTTTGTAAACACATTTAAATTGGTGGGTATGCCATTTGGACATAGAAATAGACTAATAATACATAAACTTTTCATAGTACTTTAAAGTCAACGATCAAATTGTCATTGCTTATACATTAATGATAAATTTGGGAATTTTAAATTAAGGGTTTATTATTATTATTATTATTATTATTACTACTATTATTTATATGCTTGCAATTTAGTTAAGAATTGTTTTTTACCAACTTGTGTGTGACAGGTTGGAATGGAATTTTGGCTCAAAGACAAGCAACACAGGATGTTCCTCCACAAAGACAAACCATGCTCTGATAATAATTATGTGAAAAACATGTCAAATTTCTCAACCGTCTATTTTTAAAAAAAAAATTATTATTTTTTTCTAGATTTTTGAATATGTTGAGTTTATAAATGTGTGTTTGTTTTTTCTCCAACAATGATGATAGAATTGGCAATAGTGTACCTTCTCTCATGATCTTGTAGCCATTCTTACAATTTTATTTGAAAACATTTTTTTTTAAATTAAAGTAGATCAAATATTTTATGTACA GTCAACTGGTTGCTATTATTTCATTTTCAACTCTCCAACTGGGCCAAGTGGTGTATATTCAGTCAAAGAACAACTCAGAATCACAAATCTGTTCATACTCAAGAAAACATGTAAATGCAATTATGTAAATAATCTCCCTCCACCCTCCATATGTGATGTTGACTTCAATTTTCAATTTGAATGATGAACATGGTTGACCCAACTCTTTCAACTTAGCTGTCTTCCTTTTGTTTTTCATGATTGATGAATGGAAAACTCTTTAAAAGATCAGTTTCCAAGCAAACAAGGAACATAAACATATTGCAAATTCATCTTTGAGTAGATATTTTTCTCTGCTAAAGAACAGATATGGATAGAAATGCACAATCTGCTCCAAGCATGTATCAAGCAGATACAGCCAAGGGGAATGATTGGAGTTCTGGATTGTTTGATTCCCATGAAGATGAGAAAAAAGGTCCAAGCAAACATCAAGCAAATACATCTAACCCAGGCGCTAATAATGCTGAAGCTGAGTTCTCTGGTCCAACTATGCATCAAACAAATACTGTCAGGGGAACTATTTGGAGCACTGGATTGTTTGATTGCCATGAAGATGAGACAAATGCGATTATGACAGCGTTCCTACCGTGTGTGACATTCGGACAGATTGCAGAAGTGATGGATGAAGGAGAAATGAGTTGTCCTTTGGGGAGTCTTATATATGGTCTAATGATGCCTGCTTTGTGCTCTCAATGGCTGATGGGCTCAACATACAGAACAAGGCTGAGACAGAGATATAATTTAGTAGAAGCTCCATATACTGATATAATTTCTCATGTCTTTTGCTCATGTTGCTCACTTTGCCAAGAGTTTAGAGAGCTCAAAACGAGAGGACTTGACCCTTCTTTAGGTTGGAATGGAATTTTGGCTCAAAGACAAGCAACACAGGATGTTCCTCCACAAAGACAAACCATGCTCTGATAATAATTATGTGAAAAACATGTCAAATTTCTCAACCGTCTATTTTTAAAAAAAAAATTATTATTTTTTTCTAGATTTTTGAATATGTTGAGTTTATAAATGTGTGTTTGTTTTTTCTCCAACAATGATGATAGAATTGGCAATAGTGTACCTTCTCTCATGATCTTGTAGCCATTCTTACAATTTTATTTGAAAACATTTTTTTTTAAATTAAAGTAGATCAAATATTTTATGTACA ATGGATAGAAATGCACAATCTGCTCCAAGCATGTATCAAGCAGATACAGCCAAGGGGAATGATTGGAGTTCTGGATTGTTTGATTCCCATGAAGATGAGAAAAAAGGTCCAAGCAAACATCAAGCAAATACATCTAACCCAGGCGCTAATAATGCTGAAGCTGAGTTCTCTGGTCCAACTATGCATCAAACAAATACTGTCAGGGGAACTATTTGGAGCACTGGATTGTTTGATTGCCATGAAGATGAGACAAATGCGATTATGACAGCGTTCCTACCGTGTGTGACATTCGGACAGATTGCAGAAGTGATGGATGAAGGAGAAATGAGTTGTCCTTTGGGGAGTCTTATATATGGTCTAATGATGCCTGCTTTGTGCTCTCAATGGCTGATGGGCTCAACATACAGAACAAGGCTGAGACAGAGATATAATTTAGTAGAAGCTCCATATACTGATATAATTTCTCATGTCTTTTGCTCATGTTGCTCACTTTGCCAAGAGTTTAGAGAGCTCAAAACGAGAGGACTTGACCCTTCTTTAGGTTGGAATGGAATTTTGGCTCAAAGACAAGCAACACAGGATGTTCCTCCACAAAGACAAACCATGCTCTGA MDRNAQSAPSMYQADTAKGNDWSSGLFDSHEDEKKGPSKHQANTSNPGANNAEAEFSGPTMHQTNTVRGTIWSTGLFDCHEDETNAIMTAFLPCVTFGQIAEVMDEGEMSCPLGSLIYGLMMPALCSQWLMGSTYRTRLRQRYNLVEAPYTDIISHVFCSCCSLCQEFRELKTRGLDPSLGWNGILAQRQATQDVPPQRQTML Homology
BLAST of Sed0011600 vs. NCBI nr
Match: XP_022152927.1 (protein PLANT CADMIUM RESISTANCE 8 [Momordica charantia]) HSP 1 Score: 298.9 bits (764), Expect = 3.3e-77 Identity = 148/208 (71.15%), Postives = 165/208 (79.33%), Query Frame = 0
BLAST of Sed0011600 vs. NCBI nr
Match: XP_038904618.1 (protein PLANT CADMIUM RESISTANCE 8-like [Benincasa hispida]) HSP 1 Score: 295.8 bits (756), Expect = 2.8e-76 Identity = 145/198 (73.23%), Postives = 163/198 (82.32%), Query Frame = 0
BLAST of Sed0011600 vs. NCBI nr
Match: XP_022992370.1 (protein PLANT CADMIUM RESISTANCE 8 [Cucurbita maxima]) HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75 Identity = 146/198 (73.74%), Postives = 160/198 (80.81%), Query Frame = 0
BLAST of Sed0011600 vs. NCBI nr
Match: XP_011650553.1 (protein PLANT CADMIUM RESISTANCE 8 [Cucumis sativus] >KGN56202.1 hypothetical protein Csa_010153 [Cucumis sativus]) HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75 Identity = 143/198 (72.22%), Postives = 159/198 (80.30%), Query Frame = 0
BLAST of Sed0011600 vs. NCBI nr
Match: XP_008452303.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo] >KAA0046888.1 protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo var. makuwa] >TYK03259.1 protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo var. makuwa]) HSP 1 Score: 292.7 bits (748), Expect = 2.4e-75 Identity = 143/198 (72.22%), Postives = 159/198 (80.30%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy Swiss-Prot
Match: Q9M815 (Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana OX=3702 GN=PCR8 PE=1 SV=2) HSP 1 Score: 209.9 bits (533), Expect = 2.7e-53 Identity = 99/164 (60.37%), Postives = 117/164 (71.34%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy Swiss-Prot
Match: Q9LS43 (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33 Identity = 63/132 (47.73%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy Swiss-Prot
Match: Q9M9A5 (Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32 Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy Swiss-Prot
Match: Q9LS44 (Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana OX=3702 GN=PCR4 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30 Identity = 65/164 (39.63%), Postives = 96/164 (58.54%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy Swiss-Prot
Match: Q9LS45 (Protein PLANT CADMIUM RESISTANCE 5 OS=Arabidopsis thaliana OX=3702 GN=PCR5 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 5.6e-27 Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy TrEMBL
Match: A0A6J1DHK7 (protein PLANT CADMIUM RESISTANCE 8 OS=Momordica charantia OX=3673 GN=LOC111020535 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.6e-77 Identity = 148/208 (71.15%), Postives = 165/208 (79.33%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy TrEMBL
Match: A0A6J1JVI4 (protein PLANT CADMIUM RESISTANCE 8 OS=Cucurbita maxima OX=3661 GN=LOC111488698 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 5.2e-76 Identity = 146/198 (73.74%), Postives = 160/198 (80.81%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy TrEMBL
Match: A0A0A0L6I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099630 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 8.8e-76 Identity = 143/198 (72.22%), Postives = 159/198 (80.30%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy TrEMBL
Match: A0A5A7TVI4 (Protein PLANT CADMIUM RESISTANCE 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00800 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.2e-75 Identity = 143/198 (72.22%), Postives = 159/198 (80.30%), Query Frame = 0
BLAST of Sed0011600 vs. ExPASy TrEMBL
Match: A0A1S3BUC2 (protein PLANT CADMIUM RESISTANCE 8 OS=Cucumis melo OX=3656 GN=LOC103493369 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.2e-75 Identity = 143/198 (72.22%), Postives = 159/198 (80.30%), Query Frame = 0
BLAST of Sed0011600 vs. TAIR 10
Match: AT1G52200.1 (PLAC8 family protein ) HSP 1 Score: 209.9 bits (533), Expect = 1.9e-54 Identity = 99/164 (60.37%), Postives = 117/164 (71.34%), Query Frame = 0
BLAST of Sed0011600 vs. TAIR 10
Match: AT3G18470.1 (PLAC8 family protein ) HSP 1 Score: 144.4 bits (363), Expect = 9.7e-35 Identity = 63/132 (47.73%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of Sed0011600 vs. TAIR 10
Match: AT1G49030.1 (PLAC8 family protein ) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33 Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = 0
BLAST of Sed0011600 vs. TAIR 10
Match: AT3G18460.1 (PLAC8 family protein ) HSP 1 Score: 134.8 bits (338), Expect = 7.7e-32 Identity = 65/164 (39.63%), Postives = 96/164 (58.54%), Query Frame = 0
BLAST of Sed0011600 vs. TAIR 10
Match: AT3G18450.1 (PLAC8 family protein ) HSP 1 Score: 122.5 bits (306), Expect = 4.0e-28 Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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