Sed0011529 (gene) Chayote v1

Overview


Name	Sed0011529
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Lob domain-containing protein
Location	LG10: 575299 .. 576513 (+)
RNA-Seq Expression	Sed0011529
Synteny	Sed0011529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTACATCGAAATCACAATCCAATAAGCCTCTGCTTACTTACGGCTCACCATGTGCAGCCTGTAAATTTCTAAGGAAAAAGTGTCCTTCACATTGCATTTTTGCACCACATTTTCCGCCAGACCAGCCTCGTAAATTCGAAACTGTACATCGAATCTACGGCGCCAGTAACGTCTCTAAAATTCTTAACCAACTGAGCTACGATGCTCGAAAAGAAGCCGTTACGTCTCTGCTCTACGAGGCAGAGGCTCGAATGAACGAACCTGTACGTGGCTGCACTGGCTTTTTATCAATTCTGCAAGAAAAGCTTGAAAAGCTTCGAATTGAAATTTTAGCTGCCCAAAAGGAAATTTCAACTTACATGGAATCAAAACCACAAGTTGTAAACATGGCTGGTCCGTCGAGTTTGTCTGCGATGACTCAACCGCTGAAGATGGCTATTACACCATCCTTGAATGAACGATTGTTGGTGCAGTATCCACAACAAATGACACTTGACGCTCAATTGTCTAATCAACAGGGCGTGGGTCAGCCGTTTAAGATGGCTATTACACCATCCTTGAATGAACAACTGTTGACGCAGTATCCGCAACAAATGACATTTGACGATCAATTGTTGAATCGACAAGGAGTGGATCAATGGTATAATGTGGCTCAACCGCTAAAGATGGCTATTACACCATCTTTGAATGAACCATTGTTGGTGCAGTGTCCGCAACAAATGATATTTAATGATCAATTATCGAATCAACAAAAGTTAGATCAACTATTTATGATGGCTCAACCGCTGAAGATGGCTATCACACCATCCTTGAATGAACAATCGTTGATGCAGTGTCCGCAACAAATGACACTTGATGATCAATTGTCGAATCGACAAGGAGTGGATCAACGGCTAAAGATGGCTATTACACCATCTTTGAATGAATCATTGTTGGCACAGTGTCCGCAACAAATGACACTTAATGATCAATTGTCGAATCGACAAGAGTTAGATCAACTGTTTAAGACGATTCAAAATGATAATGAAAAAAGTATCGTCACCCCATTTAGCTTCAAGACTGGTGATATGATTCAACCAGATCACAAGTGGAATGTTGATTTGTTCAAACAACTTCAAAGACATTCATTTGACGGTCAACAACAAACAACAGTGGAGCAAAAACCACCAACAATTATACATCAACCACAACGACGATCACCAACAAAATGA

mRNA sequence

ATGAGTACATCGAAATCACAATCCAATAAGCCTCTGCTTACTTACGGCTCACCATGTGCAGCCTGTAAATTTCTAAGGAAAAAGTGTCCTTCACATTGCATTTTTGCACCACATTTTCCGCCAGACCAGCCTCGTAAATTCGAAACTGTACATCGAATCTACGGCGCCAGTAACGTCTCTAAAATTCTTAACCAACTGAGCTACGATGCTCGAAAAGAAGCCGTTACGTCTCTGCTCTACGAGGCAGAGGCTCGAATGAACGAACCTGTACGTGGCTGCACTGGCTTTTTATCAATTCTGCAAGAAAAGCTTGAAAAGCTTCGAATTGAAATTTTAGCTGCCCAAAAGGAAATTTCAACTTACATGGAATCAAAACCACAAGTTGTAAACATGGCTGGTCCGTCGAGTTTGTCTGCGATGACTCAACCGCTGAAGATGGCTATTACACCATCCTTGAATGAACGATTGTTGGTGCAGTATCCACAACAAATGACACTTGACGCTCAATTGTCTAATCAACAGGGCGTGGGTCAGCCGTTTAAGATGGCTATTACACCATCCTTGAATGAACAACTGTTGACGCAGTATCCGCAACAAATGACATTTGACGATCAATTGTTGAATCGACAAGGAGTGGATCAATGGTATAATGTGGCTCAACCGCTAAAGATGGCTATTACACCATCTTTGAATGAACCATTGTTGGTGCAGTGTCCGCAACAAATGATATTTAATGATCAATTATCGAATCAACAAAAGTTAGATCAACTATTTATGATGGCTCAACCGCTGAAGATGGCTATCACACCATCCTTGAATGAACAATCGTTGATGCAGTGTCCGCAACAAATGACACTTGATGATCAATTGTCGAATCGACAAGGAGTGGATCAACGGCTAAAGATGGCTATTACACCATCTTTGAATGAATCATTGTTGGCACAGTGTCCGCAACAAATGACACTTAATGATCAATTGTCGAATCGACAAGAGTTAGATCAACTGTTTAAGACGATTCAAAATGATAATGAAAAAAGTATCGTCACCCCATTTAGCTTCAAGACTGGTGATATGATTCAACCAGATCACAAGTGGAATGTTGATTTGTTCAAACAACTTCAAAGACATTCATTTGACGGTCAACAACAAACAACAGTGGAGCAAAAACCACCAACAATTATACATCAACCACAACGACGATCACCAACAAAATGA

Coding sequence (CDS)

ATGAGTACATCGAAATCACAATCCAATAAGCCTCTGCTTACTTACGGCTCACCATGTGCAGCCTGTAAATTTCTAAGGAAAAAGTGTCCTTCACATTGCATTTTTGCACCACATTTTCCGCCAGACCAGCCTCGTAAATTCGAAACTGTACATCGAATCTACGGCGCCAGTAACGTCTCTAAAATTCTTAACCAACTGAGCTACGATGCTCGAAAAGAAGCCGTTACGTCTCTGCTCTACGAGGCAGAGGCTCGAATGAACGAACCTGTACGTGGCTGCACTGGCTTTTTATCAATTCTGCAAGAAAAGCTTGAAAAGCTTCGAATTGAAATTTTAGCTGCCCAAAAGGAAATTTCAACTTACATGGAATCAAAACCACAAGTTGTAAACATGGCTGGTCCGTCGAGTTTGTCTGCGATGACTCAACCGCTGAAGATGGCTATTACACCATCCTTGAATGAACGATTGTTGGTGCAGTATCCACAACAAATGACACTTGACGCTCAATTGTCTAATCAACAGGGCGTGGGTCAGCCGTTTAAGATGGCTATTACACCATCCTTGAATGAACAACTGTTGACGCAGTATCCGCAACAAATGACATTTGACGATCAATTGTTGAATCGACAAGGAGTGGATCAATGGTATAATGTGGCTCAACCGCTAAAGATGGCTATTACACCATCTTTGAATGAACCATTGTTGGTGCAGTGTCCGCAACAAATGATATTTAATGATCAATTATCGAATCAACAAAAGTTAGATCAACTATTTATGATGGCTCAACCGCTGAAGATGGCTATCACACCATCCTTGAATGAACAATCGTTGATGCAGTGTCCGCAACAAATGACACTTGATGATCAATTGTCGAATCGACAAGGAGTGGATCAACGGCTAAAGATGGCTATTACACCATCTTTGAATGAATCATTGTTGGCACAGTGTCCGCAACAAATGACACTTAATGATCAATTGTCGAATCGACAAGAGTTAGATCAACTGTTTAAGACGATTCAAAATGATAATGAAAAAAGTATCGTCACCCCATTTAGCTTCAAGACTGGTGATATGATTCAACCAGATCACAAGTGGAATGTTGATTTGTTCAAACAACTTCAAAGACATTCATTTGACGGTCAACAACAAACAACAGTGGAGCAAAAACCACCAACAATTATACATCAACCACAACGACGATCACCAACAAAATGA

Protein sequence

MSTSKSQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESKPQVVNMAGPSSLSAMTQPLKMAITPSLNERLLVQYPQQMTLDAQLSNQQGVGQPFKMAITPSLNEQLLTQYPQQMTFDDQLLNRQGVDQWYNVAQPLKMAITPSLNEPLLVQCPQQMIFNDQLSNQQKLDQLFMMAQPLKMAITPSLNEQSLMQCPQQMTLDDQLSNRQGVDQRLKMAITPSLNESLLAQCPQQMTLNDQLSNRQELDQLFKTIQNDNEKSIVTPFSFKTGDMIQPDHKWNVDLFKQLQRHSFDGQQQTTVEQKPPTIIHQPQRRSPTK

Homology

[Close]

BLAST of Sed0011529 vs. NCBI nr
Match: XP_038881578.1 (protein ASYMMETRIC LEAVES 2-like [Benincasa hispida])

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-39
Identity = 84/130 (64.62%), Postives = 103/130 (79.23%), Query Frame = 0


Query: 2   STSKSQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSK 61
           S S SQS KP + YGSPCAACKFLR+KC   CIFAPHFP DQP+KFE +H IYGASNVSK
Sbjct: 4   SNSHSQSQKPSINYGSPCAACKFLRRKCLPDCIFAPHFPADQPKKFEAIHTIYGASNVSK 63

Query: 62  ILNQLSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTY 121
           +LNQLSYD R +A  SL+YEAEA   +PV GC GF+SILQ++L +L+IE+  A++E+STY
Sbjct: 64  LLNQLSYDERDKAAKSLIYEAEAWQRDPVHGCVGFISILQKRLNELQIELAIARRELSTY 123

Query: 122 MESK-PQVVN 131
           + S+ PQ  N
Sbjct: 124 IVSEAPQDAN 133

[Close]

BLAST of Sed0011529 vs. NCBI nr
Match: XP_008439580.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-35
Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 6   SQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQ 65
           S +++P  TYGSPCA+CKFLR+KC + CIFAPHFP DQP+KFE VHRIYGASNVSKIL  
Sbjct: 3   SFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKA 62

Query: 66  LSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESK 125
           L YD R+E V SL++EAEAR+ +PVRGC   +S LQ++L+ L+ E+  A++E+S+YM S+
Sbjct: 63  LRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSE 122

[Close]

BLAST of Sed0011529 vs. NCBI nr
Match: KAA0052511.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-35
Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 6   SQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQ 65
           S +++P  TYGSPCA+CKFLR+KC + CIFAPHFP DQP+KFE VHRIYGASNVSKIL  
Sbjct: 3   SFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKA 62

Query: 66  LSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESK 125
           L YD R+E V SL++EAEAR+ +PVRGC   +S LQ++L+ L+ E+  A++E+S+YM S+
Sbjct: 63  LRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSE 122

[Close]

BLAST of Sed0011529 vs. NCBI nr
Match: XP_006360231.1 (PREDICTED: LOB domain-containing protein 36-like [Solanum tuberosum])

HSP 1 Score: 155.6 bits (392), Expect = 9.0e-34
Identity = 97/264 (36.74%), Postives = 151/264 (57.20%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQPRKFE VH+++GASNV+K+LN+L+   R++AV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPRKFENVHKVFGASNVAKLLNELNATQREDAVN 65

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESKPQVVNMA---- 136
           SL YEAE R+ +PV GC G +SILQ KL++++ ++L A+K+++TY+  +  +  +     
Sbjct: 66  SLAYEAEYRLRDPVYGCVGLISILQHKLKQVQDDLLNAKKDLATYIGPQAMLPMLQHSGY 125

Query: 137 -------GPSSLSAMTQPLKMAITPSLNERLLVQYPQQMTLDAQLSNQQGVGQPFKMAIT 196
                   PSS + M   ++      L ++L+++ PQQ     Q  NQQ V +  ++A  
Sbjct: 126 IQQHPNNNPSSSNMMAYNMQ---PMGLQQQLMMRDPQQ---QQQQQNQQQVIEAHQLAAV 185

Query: 197 PSLNEQLLTQYPQQMTFDDQL-----LNRQGVDQWYNVAQPLKMAITPSLNEPLLVQCPQ 256
            +  EQ + +  +Q  F++       +   G  Q  +   P  +A+    N+P  +Q  Q
Sbjct: 186 MAAREQEMMRTYEQQQFNNGYDSAGPVTATGFHQMSSSVSP-SLALASFDNDPYQIQQAQ 245

Query: 257 QMIFNDQLSNQQKLDQLFMMAQPL 265
           Q     Q+  Q +  QL    Q L
Sbjct: 246 QEQHRGQVQVQVQPHQLLQQQQQL 262

[Close]

BLAST of Sed0011529 vs. NCBI nr
Match: KAG5621387.1 (hypothetical protein H5410_006605 [Solanum commersonii])

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-33
Identity = 97/253 (38.34%), Postives = 151/253 (59.68%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQPRKFE VH+++GASNV+K+LN+L+   R++AV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPRKFENVHKVFGASNVAKLLNELNATQREDAVN 65

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYM--ESKPQVVNMAG- 136
           SL YEAE R+ +PV GC G +SILQ KL++++ ++L A+K+++TY+  ++   V+  +G 
Sbjct: 66  SLAYEAEYRLRDPVYGCVGLISILQHKLKQVQDDLLNAKKDLATYIGPQAMLPVLQHSGY 125

Query: 137 -------PSSLSAMTQPLKMAITPSLNERLLVQYPQQMTLDAQLSNQQGVGQPFKMAITP 196
                  PSS + M   ++      L ++L+++ PQQ     Q  NQQ V +  ++A   
Sbjct: 126 IQQHPINPSSSNMMAYNMQ---PMGLQQQLMMRDPQQQ----QQQNQQQVIEAHQLAAVM 185

Query: 197 SLNEQLLT---QYPQQMTFDDQL-----LNRQGVDQWYNVAQPLKMAITPSLNEPLLVQC 252
           +  EQ +    + PQQ  F++       +   G  Q  +   P  +A+    N+P  +Q 
Sbjct: 186 AAREQEMMRTYEQPQQQQFNNGYDSAGPVTATGFHQMSSSVSP-SLALASFDNDPYQIQQ 245

[Close]

BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.1e-33
Identity = 67/134 (50.00%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQP+KF  VH+++GASNV+K+LN+L+ + R++AV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESKPQVVNMAGPSS 136
           SL YEAEAR+ +PV GC G +SILQ +L+++  ++  A+KE++TY+          GP +
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYV----------GPQA 125

Query: 137 LSAMTQPLKMAITP 151
           +  + QP  M++ P
Sbjct: 126 MLPILQPHFMSLPP 129

[Close]

BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-31
Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQP+KF  VH+++GASNV+K+LN+L    R++AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTY 122
           SL YEA+ R+ +PV GC G +S+LQ +L +L+I++  A+ E+S Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30
Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 2   STSKSQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSK 61
           S+S S +   +   GSPCAACKFLR+KC   C+FAP+FPPD P+KF  VHR++GASNV+K
Sbjct: 17  SSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTK 76

Query: 62  ILNQLSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTY 121
           +LN+L    R++AV SL YEA+ R+ +PV GC G +SILQ  L +L+ ++  A+ E+S Y
Sbjct: 77  LLNELHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKY 136

Query: 122 MESKPQVVNMAGPSSLSAMTQPLKMA 148
             +       A  S+ +A T P  MA
Sbjct: 137 QAA-------AAASASTAPTGPQAMA 155

[Close]

BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.2e-30
Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = 0


Query: 14  TYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKE 73
           +Y SPCAACKFLR+KC   CIFAP+FPP++P KF  VH+I+GASNV+K+LN+L    R++
Sbjct: 7   SYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQRED 66

Query: 74  AVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESKPQVVNMAG 133
           AV SL YEAEAR+ +PV GC G +S LQ ++ +L+ E+ AA  +++ Y  S         
Sbjct: 67  AVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGAPGN 126

Query: 134 PSSLSAMTQPLKMAITPSLN 154
              L    QPL     P LN
Sbjct: 127 VVDLVFQPQPLPSQQLPPLN 146

[Close]

BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-29
Identity = 60/123 (48.78%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 2   STSKSQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSK 61
           +++ + +N      GSPCAACKFLR+KC   C+FAP+FPPD P+KF  VHR++GASNV+K
Sbjct: 22  ASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTK 81

Query: 62  ILNQLSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTY 121
           +LN+L    R++AV SL YEA+ R+ +PV GC   +SILQ  L +L+ ++  A+ E+S Y
Sbjct: 82  LLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

Query: 122 MES 125
            ++
Sbjct: 142 QQA 144

[Close]

BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: A0A5D3CQL4 (LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009370 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-36
Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 6   SQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQ 65
           S +++P  TYGSPCA+CKFLR+KC + CIFAPHFP DQP+KFE VHRIYGASNVSKIL  
Sbjct: 3   SFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKA 62

Query: 66  LSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESK 125
           L YD R+E V SL++EAEAR+ +PVRGC   +S LQ++L+ L+ E+  A++E+S+YM S+
Sbjct: 63  LRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSE 122

[Close]

BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: A0A1S3AYN9 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-36
Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 6   SQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQ 65
           S +++P  TYGSPCA+CKFLR+KC + CIFAPHFP DQP+KFE VHRIYGASNVSKIL  
Sbjct: 3   SFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKA 62

Query: 66  LSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESK 125
           L YD R+E V SL++EAEAR+ +PVRGC   +S LQ++L+ L+ E+  A++E+S+YM S+
Sbjct: 63  LRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSE 122

[Close]

BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: M0ZJH4 (Protein ASYMMETRIC LEAVES2 OS=Solanum tuberosum OX=4113 GN=102594824 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.4e-34
Identity = 97/264 (36.74%), Postives = 151/264 (57.20%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQPRKFE VH+++GASNV+K+LN+L+   R++AV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPRKFENVHKVFGASNVAKLLNELNATQREDAVN 65

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESKPQVVNMA---- 136
           SL YEAE R+ +PV GC G +SILQ KL++++ ++L A+K+++TY+  +  +  +     
Sbjct: 66  SLAYEAEYRLRDPVYGCVGLISILQHKLKQVQDDLLNAKKDLATYIGPQAMLPMLQHSGY 125

Query: 137 -------GPSSLSAMTQPLKMAITPSLNERLLVQYPQQMTLDAQLSNQQGVGQPFKMAIT 196
                   PSS + M   ++      L ++L+++ PQQ     Q  NQQ V +  ++A  
Sbjct: 126 IQQHPNNNPSSSNMMAYNMQ---PMGLQQQLMMRDPQQ---QQQQQNQQQVIEAHQLAAV 185

Query: 197 PSLNEQLLTQYPQQMTFDDQL-----LNRQGVDQWYNVAQPLKMAITPSLNEPLLVQCPQ 256
            +  EQ + +  +Q  F++       +   G  Q  +   P  +A+    N+P  +Q  Q
Sbjct: 186 MAAREQEMMRTYEQQQFNNGYDSAGPVTATGFHQMSSSVSP-SLALASFDNDPYQIQQAQ 245

Query: 257 QMIFNDQLSNQQKLDQLFMMAQPL 265
           Q     Q+  Q +  QL    Q L
Sbjct: 246 QEQHRGQVQVQVQPHQLLQQQQQL 262

[Close]

BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: A0A7J6VAL3 (Lob domain-containing protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_028584 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-33
Identity = 79/165 (47.88%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQP+KF  VH+++GASNV+K+LN+L+   R++AV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNPTQREDAVN 65

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESK----------- 136
           SL YEAE R+ +PV GC G +SILQ KL+++++E+L A+KE+STY+  +           
Sbjct: 66  SLAYEAEHRLRDPVYGCVGLISILQHKLKQVQLELLNARKELSTYIGPQAMQPLMFHQAH 125

Query: 137 -PQVVN---MAGPSSLSAMTQPLKMAITPSLNERLLVQYPQQMTL 167
            PQV++     GP  +S+M   L +   PS   +L+++ PQQ  L
Sbjct: 126 HPQVIHPTGAMGPFGMSSMA--LGLPPGPSAQSQLMIRDPQQQQL 168

[Close]

BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: A0A0A0KIS2 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.8e-33
Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 1   MSTSKSQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVS 60
           MS+S SQS K    YGSPCA+CKFLR+KC   CIFAP+FP DQP+KFE VHRIYGASNVS
Sbjct: 1   MSSSNSQSQK---IYGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVS 60

Query: 61  KILNQLSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEIST 120
           KIL    YD R+E V SL++EAEAR+ +PV GC  F++ LQ++L++L+ E+   Q+++ +
Sbjct: 61  KILKASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLS 120

Query: 121 YMESKPQVVNMAGPSSLSAMTQPLKMAITPSLNERLLVQYPQQMTLDAQ 170
           YM S+        P + S M   L    +  L+E LL ++P++ +L  Q
Sbjct: 121 YMASQL-------PPNSSYMASELPPNSSYMLSE-LLPKWPRESSLSQQ 158

[Close]

BLAST of Sed0011529 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-34
Identity = 67/134 (50.00%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQP+KF  VH+++GASNV+K+LN+L+ + R++AV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESKPQVVNMAGPSS 136
           SL YEAEAR+ +PV GC G +SILQ +L+++  ++  A+KE++TY+          GP +
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYV----------GPQA 125

Query: 137 LSAMTQPLKMAITP 151
           +  + QP  M++ P
Sbjct: 126 MLPILQPHFMSLPP 129

[Close]

BLAST of Sed0011529 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-32
Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQP+KF  VH+++GASNV+K+LN+L    R++AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTY 122
           SL YEA+ R+ +PV GC G +S+LQ +L +L+I++  A+ E+S Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Sed0011529 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-32
Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQP+KF  VH+++GASNV+K+LN+L    R++AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTY 122
           SL YEA+ R+ +PV GC G +S+LQ +L +L+I++  A+ E+S Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Sed0011529 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-32
Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQP+KF  VH+++GASNV+K+LN+L    R++AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTY 122
           SL YEA+ R+ +PV GC G +S+LQ +L +L+I++  A+ E+S Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Sed0011529 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-32
Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 17  SPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVT 76
           SPCAACKFLR+KC   C+FAP+FPPDQP+KF  VH+++GASNV+K+LN+L    R++AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTY 122
           SL YEA+ R+ +PV GC G +S+LQ +L +L+I++  A+ E+S Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

The following BLAST results are available for this feature:

BLAST of Sed0011529 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881578.1	1.4e-39	64.62	protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]	[more]
XP_008439580.1	1.3e-35	61.67	PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]	[more]
KAA0052511.1	1.3e-35	61.67	LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB...	[more]
XP_006360231.1	9.0e-34	36.74	PREDICTED: LOB domain-containing protein 36-like [Solanum tuberosum]	[more]
KAG5621387.1	2.0e-33	38.34	hypothetical protein H5410_006605 [Solanum commersonii]	[more]

BLAST of Sed0011529 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKZ3	2.1e-33	50.00	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
O04479	3.3e-31	56.19	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	1.3e-30	47.95	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
Q9FML4	8.2e-30	48.57	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
A2WXT0	1.4e-29	48.78	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]

BLAST of Sed0011529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQL4	6.1e-36	61.67	LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AYN9	6.1e-36	61.67	LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE...	[more]
M0ZJH4	4.4e-34	36.74	Protein ASYMMETRIC LEAVES2 OS=Solanum tuberosum OX=4113 GN=102594824 PE=3 SV=1	[more]
A0A7J6VAL3	2.2e-33	47.88	Lob domain-containing protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_0285...	[more]
A0A0A0KIS2	2.8e-33	49.70	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=3 SV...	[more]

BLAST of Sed0011529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66870.1	1.5e-34	50.00	ASYMMETRIC LEAVES 2-like 1	[more]
AT1G65620.1	2.4e-32	56.19	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	2.4e-32	56.19	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	2.4e-32	56.19	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	2.4e-32	56.19	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 97..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..404
None	No IPR available	PANTHER	PTHR31301:SF110	LOB DOMAIN-CONTAINING PROTEIN-RELATED	coord: 17..209
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 17..209
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 18..115 e-value: 5.8E-35 score: 119.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 17..118 score: 24.481144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011529.1	Sed0011529.1	mRNA