Sed0011529 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTACATCGAAATCACAATCCAATAAGCCTCTGCTTACTTACGGCTCACCATGTGCAGCCTGTAAATTTCTAAGGAAAAAGTGTCCTTCACATTGCATTTTTGCACCACATTTTCCGCCAGACCAGCCTCGTAAATTCGAAACTGTACATCGAATCTACGGCGCCAGTAACGTCTCTAAAATTCTTAACCAACTGAGCTACGATGCTCGAAAAGAAGCCGTTACGTCTCTGCTCTACGAGGCAGAGGCTCGAATGAACGAACCTGTACGTGGCTGCACTGGCTTTTTATCAATTCTGCAAGAAAAGCTTGAAAAGCTTCGAATTGAAATTTTAGCTGCCCAAAAGGAAATTTCAACTTACATGGAATCAAAACCACAAGTTGTAAACATGGCTGGTCCGTCGAGTTTGTCTGCGATGACTCAACCGCTGAAGATGGCTATTACACCATCCTTGAATGAACGATTGTTGGTGCAGTATCCACAACAAATGACACTTGACGCTCAATTGTCTAATCAACAGGGCGTGGGTCAGCCGTTTAAGATGGCTATTACACCATCCTTGAATGAACAACTGTTGACGCAGTATCCGCAACAAATGACATTTGACGATCAATTGTTGAATCGACAAGGAGTGGATCAATGGTATAATGTGGCTCAACCGCTAAAGATGGCTATTACACCATCTTTGAATGAACCATTGTTGGTGCAGTGTCCGCAACAAATGATATTTAATGATCAATTATCGAATCAACAAAAGTTAGATCAACTATTTATGATGGCTCAACCGCTGAAGATGGCTATCACACCATCCTTGAATGAACAATCGTTGATGCAGTGTCCGCAACAAATGACACTTGATGATCAATTGTCGAATCGACAAGGAGTGGATCAACGGCTAAAGATGGCTATTACACCATCTTTGAATGAATCATTGTTGGCACAGTGTCCGCAACAAATGACACTTAATGATCAATTGTCGAATCGACAAGAGTTAGATCAACTGTTTAAGACGATTCAAAATGATAATGAAAAAAGTATCGTCACCCCATTTAGCTTCAAGACTGGTGATATGATTCAACCAGATCACAAGTGGAATGTTGATTTGTTCAAACAACTTCAAAGACATTCATTTGACGGTCAACAACAAACAACAGTGGAGCAAAAACCACCAACAATTATACATCAACCACAACGACGATCACCAACAAAATGA ATGAGTACATCGAAATCACAATCCAATAAGCCTCTGCTTACTTACGGCTCACCATGTGCAGCCTGTAAATTTCTAAGGAAAAAGTGTCCTTCACATTGCATTTTTGCACCACATTTTCCGCCAGACCAGCCTCGTAAATTCGAAACTGTACATCGAATCTACGGCGCCAGTAACGTCTCTAAAATTCTTAACCAACTGAGCTACGATGCTCGAAAAGAAGCCGTTACGTCTCTGCTCTACGAGGCAGAGGCTCGAATGAACGAACCTGTACGTGGCTGCACTGGCTTTTTATCAATTCTGCAAGAAAAGCTTGAAAAGCTTCGAATTGAAATTTTAGCTGCCCAAAAGGAAATTTCAACTTACATGGAATCAAAACCACAAGTTGTAAACATGGCTGGTCCGTCGAGTTTGTCTGCGATGACTCAACCGCTGAAGATGGCTATTACACCATCCTTGAATGAACGATTGTTGGTGCAGTATCCACAACAAATGACACTTGACGCTCAATTGTCTAATCAACAGGGCGTGGGTCAGCCGTTTAAGATGGCTATTACACCATCCTTGAATGAACAACTGTTGACGCAGTATCCGCAACAAATGACATTTGACGATCAATTGTTGAATCGACAAGGAGTGGATCAATGGTATAATGTGGCTCAACCGCTAAAGATGGCTATTACACCATCTTTGAATGAACCATTGTTGGTGCAGTGTCCGCAACAAATGATATTTAATGATCAATTATCGAATCAACAAAAGTTAGATCAACTATTTATGATGGCTCAACCGCTGAAGATGGCTATCACACCATCCTTGAATGAACAATCGTTGATGCAGTGTCCGCAACAAATGACACTTGATGATCAATTGTCGAATCGACAAGGAGTGGATCAACGGCTAAAGATGGCTATTACACCATCTTTGAATGAATCATTGTTGGCACAGTGTCCGCAACAAATGACACTTAATGATCAATTGTCGAATCGACAAGAGTTAGATCAACTGTTTAAGACGATTCAAAATGATAATGAAAAAAGTATCGTCACCCCATTTAGCTTCAAGACTGGTGATATGATTCAACCAGATCACAAGTGGAATGTTGATTTGTTCAAACAACTTCAAAGACATTCATTTGACGGTCAACAACAAACAACAGTGGAGCAAAAACCACCAACAATTATACATCAACCACAACGACGATCACCAACAAAATGA ATGAGTACATCGAAATCACAATCCAATAAGCCTCTGCTTACTTACGGCTCACCATGTGCAGCCTGTAAATTTCTAAGGAAAAAGTGTCCTTCACATTGCATTTTTGCACCACATTTTCCGCCAGACCAGCCTCGTAAATTCGAAACTGTACATCGAATCTACGGCGCCAGTAACGTCTCTAAAATTCTTAACCAACTGAGCTACGATGCTCGAAAAGAAGCCGTTACGTCTCTGCTCTACGAGGCAGAGGCTCGAATGAACGAACCTGTACGTGGCTGCACTGGCTTTTTATCAATTCTGCAAGAAAAGCTTGAAAAGCTTCGAATTGAAATTTTAGCTGCCCAAAAGGAAATTTCAACTTACATGGAATCAAAACCACAAGTTGTAAACATGGCTGGTCCGTCGAGTTTGTCTGCGATGACTCAACCGCTGAAGATGGCTATTACACCATCCTTGAATGAACGATTGTTGGTGCAGTATCCACAACAAATGACACTTGACGCTCAATTGTCTAATCAACAGGGCGTGGGTCAGCCGTTTAAGATGGCTATTACACCATCCTTGAATGAACAACTGTTGACGCAGTATCCGCAACAAATGACATTTGACGATCAATTGTTGAATCGACAAGGAGTGGATCAATGGTATAATGTGGCTCAACCGCTAAAGATGGCTATTACACCATCTTTGAATGAACCATTGTTGGTGCAGTGTCCGCAACAAATGATATTTAATGATCAATTATCGAATCAACAAAAGTTAGATCAACTATTTATGATGGCTCAACCGCTGAAGATGGCTATCACACCATCCTTGAATGAACAATCGTTGATGCAGTGTCCGCAACAAATGACACTTGATGATCAATTGTCGAATCGACAAGGAGTGGATCAACGGCTAAAGATGGCTATTACACCATCTTTGAATGAATCATTGTTGGCACAGTGTCCGCAACAAATGACACTTAATGATCAATTGTCGAATCGACAAGAGTTAGATCAACTGTTTAAGACGATTCAAAATGATAATGAAAAAAGTATCGTCACCCCATTTAGCTTCAAGACTGGTGATATGATTCAACCAGATCACAAGTGGAATGTTGATTTGTTCAAACAACTTCAAAGACATTCATTTGACGGTCAACAACAAACAACAGTGGAGCAAAAACCACCAACAATTATACATCAACCACAACGACGATCACCAACAAAATGA MSTSKSQSNKPLLTYGSPCAACKFLRKKCPSHCIFAPHFPPDQPRKFETVHRIYGASNVSKILNQLSYDARKEAVTSLLYEAEARMNEPVRGCTGFLSILQEKLEKLRIEILAAQKEISTYMESKPQVVNMAGPSSLSAMTQPLKMAITPSLNERLLVQYPQQMTLDAQLSNQQGVGQPFKMAITPSLNEQLLTQYPQQMTFDDQLLNRQGVDQWYNVAQPLKMAITPSLNEPLLVQCPQQMIFNDQLSNQQKLDQLFMMAQPLKMAITPSLNEQSLMQCPQQMTLDDQLSNRQGVDQRLKMAITPSLNESLLAQCPQQMTLNDQLSNRQELDQLFKTIQNDNEKSIVTPFSFKTGDMIQPDHKWNVDLFKQLQRHSFDGQQQTTVEQKPPTIIHQPQRRSPTK Homology
BLAST of Sed0011529 vs. NCBI nr
Match: XP_038881578.1 (protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]) HSP 1 Score: 174.9 bits (442), Expect = 1.4e-39 Identity = 84/130 (64.62%), Postives = 103/130 (79.23%), Query Frame = 0
BLAST of Sed0011529 vs. NCBI nr
Match: XP_008439580.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]) HSP 1 Score: 161.8 bits (408), Expect = 1.3e-35 Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Sed0011529 vs. NCBI nr
Match: KAA0052511.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa]) HSP 1 Score: 161.8 bits (408), Expect = 1.3e-35 Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Sed0011529 vs. NCBI nr
Match: XP_006360231.1 (PREDICTED: LOB domain-containing protein 36-like [Solanum tuberosum]) HSP 1 Score: 155.6 bits (392), Expect = 9.0e-34 Identity = 97/264 (36.74%), Postives = 151/264 (57.20%), Query Frame = 0
BLAST of Sed0011529 vs. NCBI nr
Match: KAG5621387.1 (hypothetical protein H5410_006605 [Solanum commersonii]) HSP 1 Score: 154.5 bits (389), Expect = 2.0e-33 Identity = 97/253 (38.34%), Postives = 151/253 (59.68%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.1e-33 Identity = 67/134 (50.00%), Postives = 99/134 (73.88%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.3e-31 Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30 Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 8.2e-30 Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.4e-29 Identity = 60/123 (48.78%), Postives = 88/123 (71.54%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: A0A5D3CQL4 (LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009370 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.1e-36 Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: A0A1S3AYN9 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.1e-36 Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: M0ZJH4 (Protein ASYMMETRIC LEAVES2 OS=Solanum tuberosum OX=4113 GN=102594824 PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 4.4e-34 Identity = 97/264 (36.74%), Postives = 151/264 (57.20%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: A0A7J6VAL3 (Lob domain-containing protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_028584 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.2e-33 Identity = 79/165 (47.88%), Postives = 114/165 (69.09%), Query Frame = 0
BLAST of Sed0011529 vs. ExPASy TrEMBL
Match: A0A0A0KIS2 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.8e-33 Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of Sed0011529 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 ) HSP 1 Score: 144.8 bits (364), Expect = 1.5e-34 Identity = 67/134 (50.00%), Postives = 99/134 (73.88%), Query Frame = 0
BLAST of Sed0011529 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 137.5 bits (345), Expect = 2.4e-32 Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of Sed0011529 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 137.5 bits (345), Expect = 2.4e-32 Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of Sed0011529 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 137.5 bits (345), Expect = 2.4e-32 Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of Sed0011529 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 137.5 bits (345), Expect = 2.4e-32 Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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