Sed0011513 (gene) Chayote v1

Overview
NameSed0011513
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationContig00347: 73528 .. 75202 (-)
RNA-Seq ExpressionSed0011513
SyntenySed0011513
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAGATGGCGAGTGCCTAATCAGATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGAACAGAGAACCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGAAAGATCAGCCTGTTATCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGAAACCTTTGCACGCCTCCGCCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAAATTCTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCAGGCCCCCGGAAGAGAGCCTTCTTCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGGTATTTTCTCTACCCCTTCTTACCCTGAAAAATCAGGGGCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCGGCCTGA

mRNA sequence

ATGAAAATAGATGGCGAGTGCCTAATCAGATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGAACAGAGAACCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCGGCCTGA

Coding sequence (CDS)

ATGAAAATAGATGGCGAGTGCCTAATCAGATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGAACAGAGAACCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCGGCCTGA

Protein sequence

MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAEQRTIAVSAVLPEALGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCPTLGTYYSPRWRRADIEVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLQGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLARASSVPRDQQGVVQEYSPVVHRLRLSA
Homology
[Close]
BLAST of Sed0011513 vs. NCBI nr
Match: PPR91547.1 (hypothetical protein GOBAR_AA29147 [Gossypium barbadense])

HSP 1 Score: 499.6 bits (1285), Expect = 2.0e-137
Identity = 257/348 (73.85%), Postives = 262/348 (75.29%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQVYRSVRMPQLHTSLHFHLTPI+MINGSSRRDLLLNS+NFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIIMINGSSRRDLLLNSRNFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN-- 120
            SIPA       S +    L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN  
Sbjct: 61  HSIPAGTENPLPSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120

Query: 121 ---------CPTLGTYYSPRWRRADIE--------------------------------- 180
                     PTLGTYYSPRWRRADIE                                 
Sbjct: 121 TRGASFPILSPTLGTYYSPRWRRADIEVPNLPVDSSSLLPLHSRANLRPARGNLCTPPLP 180

Query: 181 ------------------VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLR 240
                             V+VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLR
Sbjct: 181 FGRPTPHRNCLPETVPWPVRVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLR 240

Query: 241 TVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLQGYFAEFLRESCL 286
           TVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKL+GYFAEFLRESCL
Sbjct: 241 TVIVTAAVHRGFGRRLPCH-------QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCL 300

[Close]
BLAST of Sed0011513 vs. NCBI nr
Match: TXG46680.1 (hypothetical protein EZV62_027835 [Acer yangbiense] >TXG46683.1 hypothetical protein EZV62_027838 [Acer yangbiense])

HSP 1 Score: 481.5 bits (1238), Expect = 5.5e-132
Identity = 247/324 (76.23%), Postives = 253/324 (78.09%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNC- 120
           RSIPA     ++S +  + L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN  
Sbjct: 61  RSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120

Query: 121 ------------------------PTLGTYYSPRW-------------RRADIEVQVVRI 180
                                   P  G   +P                     VQVVRI
Sbjct: 121 TRAQPLEHTTAPGGEEPTSRANLRPARGNLCTPPLPFGRPTPHRNCLPETVPWPVQVVRI 180

Query: 181 FTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVF 240
           FTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH     
Sbjct: 181 FTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH----- 240

Query: 241 GKQSPGPGHCDPLCEEAPLLPKLQGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGR 286
             QSPGPGHCDPLCEEAPLLPKL+GYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGR
Sbjct: 241 --QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGR 300

[Close]
BLAST of Sed0011513 vs. NCBI nr
Match: KAG4211951.1 (hypothetical protein ERO13_A02G134101v2 [Gossypium hirsutum])

HSP 1 Score: 478.0 bits (1229), Expect = 6.1e-131
Identity = 238/280 (85.00%), Postives = 241/280 (86.07%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120
            SIPA       S +    L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN  
Sbjct: 61  HSIPAGTENPLPSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120

Query: 121 TLGTYYSPRWRRADIEVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV 180
           T G         A   V+VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV
Sbjct: 121 TRG---------ASFPVRVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV 180

Query: 181 IVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLQGYFAEFLRESCLAP 240
           IVTAAVHRGF RRLPCH       QSPGPGHCDPLCEEAPLLPKL+GYFAEFLRESCLAP
Sbjct: 181 IVTAAVHRGFSRRLPCH-------QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAP 240

Query: 241 LGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPG 280
           LGILYLPTCVGFGYRYPFVEGRSSFSWEY MGYFSAVAPG
Sbjct: 241 LGILYLPTCVGFGYRYPFVEGRSSFSWEYSMGYFSAVAPG 264

[Close]
BLAST of Sed0011513 vs. NCBI nr
Match: KAG9438777.1 (hypothetical protein H6P81_021257 [Aristolochia fimbriata])

HSP 1 Score: 448.4 bits (1152), Expect = 5.2e-122
Identity = 229/305 (75.08%), Postives = 237/305 (77.70%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQ+ RSVRMPQLHTSLHFHLTPIVMINGSSRRDL+L+SQ+FC
Sbjct: 1   MKIDGECLIELIGSCRNKVQISRSVRMPQLHTSLHFHLTPIVMINGSSRRDLILDSQDFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120
           RSIP      ++S +    L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN  
Sbjct: 61  RSIPPGAENPSLSRLYYRGLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120

Query: 121 TLGTYYSPRWRRADIEVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV 180
           T G  +            VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV
Sbjct: 121 TRGASF-----------PVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV 180

Query: 181 IVTAAVHRGFGRRLPCHQTC-------------VFGKQSPGPGHCDPLCEEAPLLPKLQG 240
           IVTAAVHRGFGRRLPCHQ               VFGKQSPGPGHCDP     P       
Sbjct: 181 IVTAAVHRGFGRRLPCHQASAPIRGLTTSRRRPVFGKQSPGPGHCDPFVRRHPFSRSYGA 240

Query: 241 YFAEFL-RESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR 291
                L RESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR
Sbjct: 241 ILPSSLERESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR 294

[Close]
BLAST of Sed0011513 vs. NCBI nr
Match: OIV89924.1 (hypothetical protein TanjilG_08301 [Lupinus angustifolius])

HSP 1 Score: 446.8 bits (1148), Expect = 1.5e-121
Identity = 219/249 (87.95%), Postives = 224/249 (89.96%), Query Frame = 0 

Query: 43  MINGSSRRDLLLNSQNFCRSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSS 102
           M NGSSRRDLLLNSQNF RSIPA  +  ++S +    L GSRNRRALILGWAYYLDAFSS
Sbjct: 1   MRNGSSRRDLLLNSQNFFRSIPAGAKNPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSS 60

Query: 103 YPLRTWLPSVYRGHDNCPTLGTYYSPRWRRADIE-----VQVVRIFTDMSISPSLSPRQC 162
           YPLRTWLPSVYRGHDNCPTLGTYYSPRWRRADIE     V VVRIFTDMSISPSLSPRQC
Sbjct: 61  YPLRTWLPSVYRGHDNCPTLGTYYSPRWRRADIEVPNLPVDVVRIFTDMSISPSLSPRQC 120

Query: 163 PDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCE 222
           PDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCE
Sbjct: 121 PDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH-------QSPGPGHCDPLCE 180

Query: 223 EAPLLPKLQGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAV 282
           EAPLLPKL+GYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAV
Sbjct: 181 EAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAV 240

Query: 283 APGTRTLAR 286
           APGTRTLAR
Sbjct: 241 APGTRTLAR 242

[Close]
BLAST of Sed0011513 vs. ExPASy Swiss-Prot
Match: Q3BAI2 (Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana OX=308872 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 136 VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPC 195
           +QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV+VTAAVHRGFGRRLPC
Sbjct: 1   MQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVLVTAAVHRGFGRRLPC 60

Query: 196 HQTCVF 202
           HQ   F
Sbjct: 61  HQVTNF 66

[Close]
BLAST of Sed0011513 vs. ExPASy TrEMBL
Match: A0A2N9IAE2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50768 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.6e-145
Identity = 267/360 (74.17%), Postives = 271/360 (75.28%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120
           RSIPA     ++S +    L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP
Sbjct: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120

Query: 121 TLGTYYSPRWRRADIEV------------------------------------------- 180
           TLGTYYSPRWRRADIEV                                           
Sbjct: 121 TLGTYYSPRWRRADIEVPNLPVDSSSLLPLHSRANLRLARGNLCTPPLPFGRPTPHRNCL 180

Query: 181 ------QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240
                  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG
Sbjct: 181 PETVPWPVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240

Query: 241 RRLPCHQT-------------------------CVFGKQSPGPGHCDPLCEEAPLLPKLQ 286
           RRLPCHQ                          C FGKQSPGPGHCDPLCEEAPLLPKL+
Sbjct: 241 RRLPCHQVTNFLDLPALGRRQPPYMVLRLCGDLCWFGKQSPGPGHCDPLCEEAPLLPKLR 300

[Close]
BLAST of Sed0011513 vs. ExPASy TrEMBL
Match: A0A2N9I7K2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26797 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.8e-144
Identity = 262/335 (78.21%), Postives = 266/335 (79.40%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120
           RSIPA     ++S +    L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP
Sbjct: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120

Query: 121 TLGTYYSPRWRRADIEV------------------------------------------- 180
           TLGTYYSPRWRRADIEV                                           
Sbjct: 121 TLGTYYSPRWRRADIEVPNLPVDSSSLLPLHSRANLRLARGNLCTPPLPFGRPTPHRNCL 180

Query: 181 ------QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240
                  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG
Sbjct: 181 PETVPWPVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240

Query: 241 RRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLQGYFAEFLRESCLAPLGILYLPTCVG 286
           RRLPCH       QSPGPGHCDPLCEEAPLLPKL+GYFAEFLRESCLAPLGILYLPTCVG
Sbjct: 241 RRLPCH-------QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVG 300

[Close]
BLAST of Sed0011513 vs. ExPASy TrEMBL
Match: A0A2N9HR91 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40356 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.8e-144
Identity = 262/335 (78.21%), Postives = 266/335 (79.40%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120
           RSIPA     ++S +    L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP
Sbjct: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120

Query: 121 TLGTYYSPRWRRADIEV------------------------------------------- 180
           TLGTYYSPRWRRADIEV                                           
Sbjct: 121 TLGTYYSPRWRRADIEVPNLPVDSSSLLPLHSRANLRLARGNLCTPPLPFGRPTPHRNCL 180

Query: 181 ------QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240
                  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG
Sbjct: 181 PETVPWPVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240

Query: 241 RRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLQGYFAEFLRESCLAPLGILYLPTCVG 286
           RRLPCH       QSPGPGHCDPLCEEAPLLPKL+GYFAEFLRESCLAPLGILYLPTCVG
Sbjct: 241 RRLPCH-------QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVG 300

[Close]
BLAST of Sed0011513 vs. ExPASy TrEMBL
Match: A0A2N9I3B0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21723 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.8e-144
Identity = 262/335 (78.21%), Postives = 266/335 (79.40%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120
           RSIPA     ++S +    L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP
Sbjct: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120

Query: 121 TLGTYYSPRWRRADIEV------------------------------------------- 180
           TLGTYYSPRWRRADIEV                                           
Sbjct: 121 TLGTYYSPRWRRADIEVPNLPVDSSSLLPLHSRANLRLARGNLCTPPLPFGRPTPHRNCL 180

Query: 181 ------QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240
                  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG
Sbjct: 181 PETVPWPVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240

Query: 241 RRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLQGYFAEFLRESCLAPLGILYLPTCVG 286
           RRLPCH       QSPGPGHCDPLCEEAPLLPKL+GYFAEFLRESCLAPLGILYLPTCVG
Sbjct: 241 RRLPCH-------QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVG 300

[Close]
BLAST of Sed0011513 vs. ExPASy TrEMBL
Match: A0A2N9I1D1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45726 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.8e-144
Identity = 262/335 (78.21%), Postives = 266/335 (79.40%), Query Frame = 0 

Query: 1   MKIDGECLIRLIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLI LIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAEQRTIAVSAVLPEAL-GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120
           RSIPA     ++S +    L GSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP
Sbjct: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP 120

Query: 121 TLGTYYSPRWRRADIEV------------------------------------------- 180
           TLGTYYSPRWRRADIEV                                           
Sbjct: 121 TLGTYYSPRWRRADIEVPNLPVDSSSLLPLHSRANLRLARGNLCTPPLPFGRPTPHRNCL 180

Query: 181 ------QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240
                  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG
Sbjct: 181 PETVPWPVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFG 240

Query: 241 RRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLQGYFAEFLRESCLAPLGILYLPTCVG 286
           RRLPCH       QSPGPGHCDPLCEEAPLLPKL+GYFAEFLRESCLAPLGILYLPTCVG
Sbjct: 241 RRLPCH-------QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVG 300

The following BLAST results are available for this feature:
BLAST of Sed0011513 vs. NCBI nr
Match NameE-valueIdentityDescription
PPR91547.12.0e-13773.85hypothetical protein GOBAR_AA29147 [Gossypium barbadense][more]
TXG46680.15.5e-13276.23hypothetical protein EZV62_027835 [Acer yangbiense] >TXG46683.1 hypothetical pro... [more]
KAG4211951.16.1e-13185.00hypothetical protein ERO13_A02G134101v2 [Gossypium hirsutum][more]
KAG9438777.15.2e-12275.08hypothetical protein H6P81_021257 [Aristolochia fimbriata][more]
OIV89924.11.5e-12187.95hypothetical protein TanjilG_08301 [Lupinus angustifolius][more]
BLAST of Sed0011513 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3BAI21.1e-2992.42Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana OX=3088... [more]
BLAST of Sed0011513 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9IAE23.6e-14574.17Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50768 PE=4 SV=1[more]
A0A2N9I7K26.8e-14478.21Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26797 PE=4 SV=1[more]
A0A2N9HR916.8e-14478.21Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40356 PE=4 SV=1[more]
A0A2N9I3B06.8e-14478.21Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21723 PE=4 SV=1[more]
A0A2N9I1D16.8e-14478.21Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45726 PE=4 SV=1[more]
BLAST of Sed0011513 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0011513.1Sed0011513.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009536 plastid