Sed0011478 (gene) Chayote v1

Overview


Name	Sed0011478
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Zinc finger (C2H2 type) family protein
Location	LG08: 25007863 .. 25008893 (-)
RNA-Seq Expression	Sed0011478
Synteny	Sed0011478

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGACCTCGTGAAAGTTGAAACAACAGGGCTCAATCACCTACTCCTGCGCCCATTGTTTTCCATCCTCCCACCCAATGGAATATCTTCAGGTAACCAATCTCACGTAAACACGACCGCAGAGGATTGTCAAGAATACCGAATTAGAGCCATATAAATAAAGCAAACGCCAACGATAGGTTTCGCCCAAACTAGGGTTTCTCCCCATCAATCATCGTTTTATCGACAAAATTTCCCCTCAAATCTGCGCGAAAAAGCTTTCGATTTGAATTTTCCTGTTCTTCATTGGATTCGATTTGCATCGATAAATCAATTGATCAACCATGACGGGGAAGGCGAAGCCGAAGAAGCACACCGCCAAAGAGATCGCTGCGAAGATCGACGCAGCCACCACCAACAGGGGCGGCGGAAAGGCCGGAATCGCCGACCGGACCGGCCAAGATAAGGGCGGCCATGCCAAGTTCGAGTGTCCGTACTGCAAGATCACGGCGCCGGATGTGAAGACTATGCAGATTCATCACGAGTCCAAGCATCCCAAAATCCCTTTCGAGGAGGACAAGGTTACAAATCTCCACTCTGTTCGTGTTGTTGCCGAGGCCTCAAAGCCCAAACCGGGTGTCAGAGGTAGCCTCAAGAAGTGATGGAATCCAAGTTTCAGGATGATTAACGCTGATGATGATGATGATGATGATTATGGTGGGTGGGCTCAATTCTATGCTATTGGGTACTTTGGTTTTTTTTTTCTCTTATTATTATTATTATCTCGGTCTTTCTATGCTTTGTCTCTGTTGCTGATGGATGCTGGCTTAACGTGTAAGATGTTTGATTAAAACATATTATATGTCCTTGGAGCTTCGGTCTTCGTCTTCCTTCTTGAGATTGATGCAGTTATGTTTATGTATATTACATAACAAATATGATCGTAGTTGTTATGGTAACAGATGGACGTGTTCGTCAAAATTAGAGTGGCTTCGTCAAAAATAAACCTTGGTATTTTGTTTTCGAATGTTATGGGCTTAAGATCTTCGTGA

mRNA sequence

AAATGACCTCGTGAAAGTTGAAACAACAGGGCTCAATCACCTACTCCTGCGCCCATTGTTTTCCATCCTCCCACCCAATGGAATATCTTCAGGTAACCAATCTCACGTAAACACGACCGCAGAGGATTGTCAAGAATACCGAATTAGAGCCATATAAATAAAGCAAACGCCAACGATAGGTTTCGCCCAAACTAGGGTTTCTCCCCATCAATCATCGTTTTATCGACAAAATTTCCCCTCAAATCTGCGCGAAAAAGCTTTCGATTTGAATTTTCCTGTTCTTCATTGGATTCGATTTGCATCGATAAATCAATTGATCAACCATGACGGGGAAGGCGAAGCCGAAGAAGCACACCGCCAAAGAGATCGCTGCGAAGATCGACGCAGCCACCACCAACAGGGGCGGCGGAAAGGCCGGAATCGCCGACCGGACCGGCCAAGATAAGGGCGGCCATGCCAAGTTCGAGTGTCCGTACTGCAAGATCACGGCGCCGGATGTGAAGACTATGCAGATTCATCACGAGTCCAAGCATCCCAAAATCCCTTTCGAGGAGGACAAGGTTACAAATCTCCACTCTGTTCGTGTTGTTGCCGAGGCCTCAAAGCCCAAACCGGGTGTCAGAGGTAGCCTCAAGAAGTGATGGAATCCAAGTTTCAGGATGATTAACGCTGATGATGATGATGATGATGATTATGGTGGGTGGGCTCAATTCTATGCTATTGGGTACTTTGGTTTTTTTTTTCTCTTATTATTATTATTATCTCGGTCTTTCTATGCTTTGTCTCTGTTGCTGATGGATGCTGGCTTAACGTGTAAGATGTTTGATTAAAACATATTATATGTCCTTGGAGCTTCGGTCTTCGTCTTCCTTCTTGAGATTGATGCAGTTATGTTTATGTATATTACATAACAAATATGATCGTAGTTGTTATGGTAACAGATGGACGTGTTCGTCAAAATTAGAGTGGCTTCGTCAAAAATAAACCTTGGTATTTTGTTTTCGAATGTTATGGGCTTAAGATCTTCGTGA

Coding sequence (CDS)

ATGACGGGGAAGGCGAAGCCGAAGAAGCACACCGCCAAAGAGATCGCTGCGAAGATCGACGCAGCCACCACCAACAGGGGCGGCGGAAAGGCCGGAATCGCCGACCGGACCGGCCAAGATAAGGGCGGCCATGCCAAGTTCGAGTGTCCGTACTGCAAGATCACGGCGCCGGATGTGAAGACTATGCAGATTCATCACGAGTCCAAGCATCCCAAAATCCCTTTCGAGGAGGACAAGGTTACAAATCTCCACTCTGTTCGTGTTGTTGCCGAGGCCTCAAAGCCCAAACCGGGTGTCAGAGGTAGCCTCAAGAAGTGA

Protein sequence

MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK

Homology

[Close]

BLAST of Sed0011478 vs. NCBI nr
Match: XP_008443699.1 (PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo] >KAA0038267.1 Zinc finger (C2H2 type) family protein [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 96/105 (91.43%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           +MQIHHESKHPKIPFEEDKVTNLH+VRV AEASKPKPGVRGS KK
Sbjct: 61  SMQIHHESKHPKIPFEEDKVTNLHAVRVTAEASKPKPGVRGSYKK 105

[Close]

BLAST of Sed0011478 vs. NCBI nr
Match: XP_022961022.1 (uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022961023.1 uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022988627.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988628.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988629.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988631.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988632.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >KAG7023763.1 hypothetical protein SDJN02_14789, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.7 bits (504), Expect = 2.4e-47
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           TMQIHHESKHPKIP+EEDKV NLH+VRV AEASKPKPGVRGS KK
Sbjct: 61  TMQIHHESKHPKIPYEEDKVVNLHAVRVAAEASKPKPGVRGSFKK 105

[Close]

BLAST of Sed0011478 vs. NCBI nr
Match: XP_023516233.1 (uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo] >XP_023516234.1 uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 3.2e-47
Identity = 94/105 (89.52%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CK+TAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKVTAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           TMQIHHESKHPKIP+EEDKV NLH+VRV AEASKPKPGVRGS KK
Sbjct: 61  TMQIHHESKHPKIPYEEDKVVNLHAVRVAAEASKPKPGVRGSFKK 105

[Close]

BLAST of Sed0011478 vs. NCBI nr
Match: XP_038901282.1 (protein METHYLENE BLUE SENSITIVITY 1-like [Benincasa hispida])

HSP 1 Score: 198.0 bits (502), Expect = 4.1e-47
Identity = 94/105 (89.52%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           +MQIHHESKHPKIP+EEDKV NLH+VRV A+ASKPKPGVRGS KK
Sbjct: 61  SMQIHHESKHPKIPYEEDKVVNLHAVRVAADASKPKPGVRGSFKK 105

[Close]

BLAST of Sed0011478 vs. NCBI nr
Match: TYK19814.1 (Zinc finger (C2H2 type) family protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.8 bits (499), Expect = 9.2e-47
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           +MQIHHESKHPKIPFEEDKVTNLH+VRV AEASK KPGVRGS KK
Sbjct: 61  SMQIHHESKHPKIPFEEDKVTNLHAVRVTAEASKTKPGVRGSYKK 105

[Close]

BLAST of Sed0011478 vs. ExPASy Swiss-Prot
Match: Q9M8S0 (Protein METHYLENE BLUE SENSITIVITY 1 OS=Arabidopsis thaliana OX=3702 GN=MBS1 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-42
Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAA TNRGGGKAGIADRTG++KGGHAK+ECP+CKITAP +K
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           TMQIHHESKHP I +EE K+ NLH+V      SKPKPG+RGSLKK
Sbjct: 61  TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK 105

[Close]

BLAST of Sed0011478 vs. ExPASy Swiss-Prot
Match: Q9FFD8 (Protein METHYLENE BLUE SENSITIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MBS2 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.1e-40
Identity = 80/106 (75.47%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKE+ AK DAA TNRGGGKAG+ADRTG++KGGHAK+ECP+CKIT PD+K
Sbjct: 1   MTGKAKPKKHTAKELQAKADAALTNRGGGKAGLADRTGKEKGGHAKYECPHCKITVPDLK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLH-SVRVVAEASKPKPGVRGSLKK 106
           TMQIHHESKHPK+ +EE +  NLH ++   AE+SKPKPG+RGSLKK
Sbjct: 61  TMQIHHESKHPKLTYEEPR--NLHEALAAPAESSKPKPGIRGSLKK 104

[Close]

BLAST of Sed0011478 vs. ExPASy TrEMBL
Match: A0A5A7T9G3 (Zinc finger (C2H2 type) family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001180 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.3e-48
Identity = 96/105 (91.43%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           +MQIHHESKHPKIPFEEDKVTNLH+VRV AEASKPKPGVRGS KK
Sbjct: 61  SMQIHHESKHPKIPFEEDKVTNLHAVRVTAEASKPKPGVRGSYKK 105

[Close]

BLAST of Sed0011478 vs. ExPASy TrEMBL
Match: A0A1S3B9F4 (uncharacterized protein LOC103487230 OS=Cucumis melo OX=3656 GN=LOC103487230 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.3e-48
Identity = 96/105 (91.43%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           +MQIHHESKHPKIPFEEDKVTNLH+VRV AEASKPKPGVRGS KK
Sbjct: 61  SMQIHHESKHPKIPFEEDKVTNLHAVRVTAEASKPKPGVRGSYKK 105

[Close]

BLAST of Sed0011478 vs. ExPASy TrEMBL
Match: A0A6J1JHR8 (uncharacterized protein LOC111485822 OS=Cucurbita maxima OX=3661 GN=LOC111485822 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           TMQIHHESKHPKIP+EEDKV NLH+VRV AEASKPKPGVRGS KK
Sbjct: 61  TMQIHHESKHPKIPYEEDKVVNLHAVRVAAEASKPKPGVRGSFKK 105

[Close]

BLAST of Sed0011478 vs. ExPASy TrEMBL
Match: A0A6J1H903 (uncharacterized protein LOC111461652 OS=Cucurbita moschata OX=3662 GN=LOC111461652 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           TMQIHHESKHPKIP+EEDKV NLH+VRV AEASKPKPGVRGS KK
Sbjct: 61  TMQIHHESKHPKIPYEEDKVVNLHAVRVAAEASKPKPGVRGSFKK 105

[Close]

BLAST of Sed0011478 vs. ExPASy TrEMBL
Match: A0A5D3D8D3 (Zinc finger (C2H2 type) family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00090 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.4e-47
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           +MQIHHESKHPKIPFEEDKVTNLH+VRV AEASK KPGVRGS KK
Sbjct: 61  SMQIHHESKHPKIPFEEDKVTNLHAVRVTAEASKTKPGVRGSYKK 105

[Close]

BLAST of Sed0011478 vs. TAIR 10
Match: AT3G02790.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-43
Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAA TNRGGGKAGIADRTG++KGGHAK+ECP+CKITAP +K
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK 106
           TMQIHHESKHP I +EE K+ NLH+V      SKPKPG+RGSLKK
Sbjct: 61  TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK 105

[Close]

BLAST of Sed0011478 vs. TAIR 10
Match: AT5G16470.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 164.9 bits (416), Expect = 3.6e-41
Identity = 80/106 (75.47%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKE+ AK DAA TNRGGGKAG+ADRTG++KGGHAK+ECP+CKIT PD+K
Sbjct: 1   MTGKAKPKKHTAKELQAKADAALTNRGGGKAGLADRTGKEKGGHAKYECPHCKITVPDLK 60

Query: 61  TMQIHHESKHPKIPFEEDKVTNLH-SVRVVAEASKPKPGVRGSLKK 106
           TMQIHHESKHPK+ +EE +  NLH ++   AE+SKPKPG+RGSLKK
Sbjct: 61  TMQIHHESKHPKLTYEEPR--NLHEALAAPAESSKPKPGIRGSLKK 104

The following BLAST results are available for this feature:

BLAST of Sed0011478 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443699.1	1.1e-47	91.43	PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo] >KAA0038267.1 Zin...	[more]
XP_022961022.1	2.4e-47	90.48	uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022961023.1 unchar...	[more]
XP_023516233.1	3.2e-47	89.52	uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo] >XP_023516234....	[more]
XP_038901282.1	4.1e-47	89.52	protein METHYLENE BLUE SENSITIVITY 1-like [Benincasa hispida]	[more]
TYK19814.1	9.2e-47	90.48	Zinc finger (C2H2 type) family protein [Cucumis melo var. makuwa]	[more]

BLAST of Sed0011478 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8S0	1.4e-42	79.05	Protein METHYLENE BLUE SENSITIVITY 1 OS=Arabidopsis thaliana OX=3702 GN=MBS1 PE=...	[more]
Q9FFD8	5.1e-40	75.47	Protein METHYLENE BLUE SENSITIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MBS2 PE=...	[more]

BLAST of Sed0011478 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9G3	5.3e-48	91.43	Zinc finger (C2H2 type) family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B9F4	5.3e-48	91.43	uncharacterized protein LOC103487230 OS=Cucumis melo OX=3656 GN=LOC103487230 PE=...	[more]
A0A6J1JHR8	1.2e-47	90.48	uncharacterized protein LOC111485822 OS=Cucurbita maxima OX=3661 GN=LOC111485822...	[more]
A0A6J1H903	1.2e-47	90.48	uncharacterized protein LOC111461652 OS=Cucurbita moschata OX=3662 GN=LOC1114616...	[more]
A0A5D3D8D3	4.4e-47	90.48	Zinc finger (C2H2 type) family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Sed0011478 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02790.1	1.0e-43	79.05	zinc finger (C2H2 type) family protein	[more]
AT5G16470.1	3.6e-41	75.47	zinc finger (C2H2 type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR21213	GEO09665P1-RELATED	coord: 1..105
None	No IPR available	PANTHER	PTHR21213:SF19	PROTEIN METHYLENE BLUE SENSITIVITY 1	coord: 1..105
None	No IPR available	SUPERFAMILY	118359	Expressed protein At2g23090/F21P24.15	coord: 29..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011478.1	Sed0011478.1	mRNA