Sed0011461 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCAAGCTGTAATCAATGGTCCAAAGCTCACCCCCTCATTTCTTTTTCTATTCTTCTTTTTTTCTCTTGCAAATTGTTAACGTTAGGTTTTCGATTGTAGCTTTCGATTTGAGGTGATCCATCATCTTCACAGTTGGTATCATAGCTTCGAAGATAGCGTTCATGATGGAAAAAAGTGACTTTGGGTTATGGAAAAGGAAGATAAAGGCTCTTCTGGTTCATCAGAAGGTCGCGAAGATTCTGAGTGTCAAAGATGATAAATCTGTGGCTATGAAAGAGCAAGCAAAGCACCATTATTCTTTACCTTGGAGACAACGTCTTAAGAAGAATCGGTGAAGTGCAAGGTGTTGCAGAGCTTGGGAAGAAGCTCCATGAGATAGATGTATGTTGCGAAATCTCTTACTCATGGAAAGGTAATCAGATTTATCTCAAAGACATTCGAAGAAAATCTTGATGAATTCAATATAATTTACACTCATTTGGTTAATTCAGGTGAGAAGATTGATCCGGAGAATCAGGCAGTAATTTTGTTAAATTCTTTACCAGAAAAATATACAAAGAAGTGAAATCTGCGATGAAGTATGGAACAGACTTGATTACCAGCGGCGTAAGATCAAAGGAACTCGAAATGAAGGTTGAAAATATTGAATCAGAAGCTTTGTTCATCAAGAACAAGAATTCAAAATATAACAATTTCAAGAACACAAAGCAAGGCTCGAAATCTGGTAAGACAAGTCAATCTAATTCTACACATTCTACTGGCAATGTCAAGGGACTCCATGCTTTGCAGAAGCAAGGATGAATAGAGAAAAAAAAATGTAATAAAGTCTATTTCTGCAAACATTACATAATCGAGAAGTCAACGAGGAAAAGTTTCTCTAGATCTTCTTCGAAAACTTCTGAGGTATTGCAGCTTGTTCATTCAGATTTATGGGGTTCTGCAAAAGTTGCAACTCATGGAGGAGCTCGTTATTATCTCTCAATAGTTGATGACTACTCTAGAAAACTTTGGGTTTATATGCTGAAATCAAAGGACGAAAATTTTGAAAAGTTCCAAATTTGGGAAAGACTTGTAGAGAACCAAACAGGTAAAAGAGTCAAAATTTTGCGAACTGATAATGGACCTTAATATTTGAATTTGAGGTTTGGAAGTCTCTGCAATGAAAGTGGCATAGTAAGGCATTTTATGGTTCTAGGAACGCCTCAACAGAATGGCCTTGTAGAACGATACAATCGCACAATTCTTGAAAAAGTTCGATGTATGTTATCAAATGCTTAGATGCCTAAGTCTTTTTGGGGAGAGGCAGTTCTAACTGTAGCCTATATAATTAATCGATGTCCATCAACTGCTCTAGATTCTAAAACTCCTTAAGAGATTTGGAATGGATCTGCACCAAAGCTGAATCACTTGAGAGTGTTTGGATGTGCAACATATGCACATTTGAAGCAAGGAAAATTAGAGGCAAGTGCAAAGAAGTGTGTGTTTATCGGCTATCCAGTTTGGGATAAAATGTTACAAAATTTGGTCTATCGAACCTAGTAAAAACAAGTGTTTTATCAGTAGAGATGTCATTTTCAATGAGGAAGTGATGCCATGGAAGGATTCGCAGAATATAAGTCACTCGCTGATGTAGAGTGCTTTTGAAATTGAATTGGATGAAGTAGTGACCTCAAAGAATAAAGGAAATGATGGTCAAGAAATAGAACCTGTTGATACTTCACCTAAACTTGAGCCAATTCAAATCCCCAGTGATACAAGTGATGGTTTAGGTTCATACCAACTTGCCAGTGATAGAGAAAGAAGGACAATTAGACCTCTTAACAGGTATGGTGAAGCTAAAATTGCAACTTATGCATTGAACTGTTTTGAAGAAATTTCTTTTAGTGAACCTGCCTCCTATAAAGAAGCACTTCTATCTCCTAAGGCAGAAGATTGGAAGAAGGTAATGCATATTGAATATGAATCCCTCATGAAGAATCAAACATGGATACTTGTCCCAACTCCTAAAAATAAGAAAGTAGTTTCTTGTAAATGGATTTACAAACTGAAACTGGGAGTAAAAGCATCAGATAAGCTTAGATTGAAGGCTAGACTTGTAGAAAAAGGGTATATACAAGAGGAAGGCACTGATTTTAATGAGGTATTTTCACCAGTTGTAAAACACACCTCAATTCCTGCACTGTTGTCCTTAATTACAACAGATGGATGTTACTACAGCTAGCGGAAGCCATTAAGGAGTTAATTTGGCTGAAGGGACTTGTAACAGAGATGCTAGGAGAAGAAAGTAGCATAGAGAAATGCAGTGTGATAGTGAAATATTTCGAAAAATATTGTTCACATTACATACGAGATGTTGTACAAGATGGAACCATATCACTGTGGAAAGTTGGCACAGAACACAATCCGGCGGACTTGTTTACTAAGGCGACGATGAACGAGAGATTTTCATATCTCTGTGGCCTTTTGAAGATGGGAGCTGGATACACTACTGTGGAGAAGATAAAGAGTTCTCAGGTCAACGGAGGATTTTGTTGTTTGACTTGCTTCTCCACCTCATCATTGGGCAAATAGGTGGTGTGGGTTTATTGTGCATTCTCATTCGTTGGATTATAAGTCGTAATCAGTGGTCCAAAGCTCACCACCTCATTTTATTGATTTCATTTTGTATATGCCTATTAGATGTATAAAAGAG TTTCAAGCTGTAATCAATGGTCCAAAGCTCACCCCCTCATTTCTTTTTCTATTCTTCTTTTTTTCTCTTGCAAATTGTTAACGTTAGGTTTTCGATTGTAGCTTTCGATTTGAGGTGATCCATCATCTTCACAGTTGGTATCATAGCTTCGAAGATAGCGTTCATGATGGAAAAAAGTGACTTTGGGTTATGGAAAAGGAAGATAAAGGCTCTTCTGGTTCATCAGAAGGTCGCGAAGATTCTGAGTGTCAAAGATGATAAATCTGTGGCTATGAAAGAGCAAGCAAAGCACCATTATTCTTTACCTTGGAGACAACGTCTTAAGAAGAATCGGTGAAGTGCAAGGTGTTGCAGAGCTTGGGAAGAAGCTCCATGAGATAGATGTATGTTGCGAAATCTCTTACTCATGGAAAGGTGAGAAGATTGATCCGGAGAATCAGGCAGTAATTTTGTTAAATTCTTTACCAGAAAAATATACAAAGAAGTGAAATCTGCGATGAAGTATGGAACAGACTTGATTACCAGCGGCGTAAGATCAAAGGAACTCGAAATGAAGGTTGAAAATATTGAATCAGAAGCTTTGTTCATCAAGAACAAGAATTCAAAATATAACAATTTCAAGAACACAAAGCAAGGCTCGAAATCTGGTAAGACAAGTCAATCTAATTCTACACATTCTACTGGCAATGTCAAGGGACTCCATGCTTTGCAGAAGCAAGGATGAATAGAGAAAAAAAAATGTAATAAAGTCTATTTCTGCAAACATTACATAATCGAGAAGTCAACGAGGAAAAGTTTCTCTAGATCTTCTTCGAAAACTTCTGAGGTATTGCAGCTTGTTCATTCAGATTTATGGGGTTCTGCAAAAGTTGCAACTCATGGAGGAGCTCGTTATTATCTCTCAATAGTTGATGACTACTCTAGAAAACTTTGGGTTTATATGCTGAAATCAAAGGACGAAAATTTTGAAAAGTTCCAAATTTGGGAAAGACTTGTAGAGAACCAAACAGGTAAAAGAGTCAAAATTTTGCGAACTGATAATGGACCTTAATATTTGAATTTGAGGTTTGGAAGTCTCTGCAATGAAAGTGGCATAGTAAGGCATTTTATGGTTCTAGGAACGCCTCAACAGAATGGCCTTGTAGAACGATACAATCGCACAATTCTTGAAAAAGTTCGATGTATGTTATCAAATGCTTAGATGCCTAAGTCTTTTTGGGGAGAGGCAGTTCTAACTGTAGCCTATATAATTAATCGATGTCCATCAACTGCTCTAGATTCTAAAACTCCTTAAGAGATTTGGAATGGATCTGCACCAAAGCTGAATCACTTGAGAGTGTTTGGATGTGCAACATATGCACATTTGAAGCAAGGAAAATTAGAGGCAAGTGCAAAGAAGTGTGTGTTTATCGGCTATCCAGTTTGGGATAAAATGTTACAAAATTTGGTCTATCGAACCTAGTAAAAACAAGTGTTTTATCAGTAGAGATGTCATTTTCAATGAGGAAGTGATGCCATGGAAGGATTCGCAGAATATAAGTCACTCGCTGATGTAGAGTGCTTTTGAAATTGAATTGGATGAAGTAGTGACCTCAAAGAATAAAGGAAATGATGGTCAAGAAATAGAACCTGTTGATACTTCACCTAAACTTGAGCCAATTCAAATCCCCAGTGATACAAGTGATGGTTTAGGTTCATACCAACTTGCCAGTGATAGAGAAAGAAGGACAATTAGACCTCTTAACAGGTATGGTGAAGCTAAAATTGCAACTTATGCATTGAACTGTTTTGAAGAAATTTCTTTTAGTGAACCTGCCTCCTATAAAGAAGCACTTCTATCTCCTAAGGCAGAAGATTGGAAGAAGGTAATGCATATTGAATATGAATCCCTCATGAAGAATCAAACATGGATACTTGTCCCAACTCCTAAAAATAAGAAAGTAGTTTCTTGTAAATGGATTTACAAACTGAAACTGGGAGTAAAAGCATCAGATAAGCTTAGATTGAAGGCTAGACTTGTAGAAAAAGGGTATATACAAGAGGAAGGCACTGATTTTAATGAGGTATTTTCACCAGTTGTAAAACACACCTCAATTCCTGCACTGTTGTCCTTAATTACAACAGATGGATGTTACTACAGCTAGCGGAAGCCATTAAGGAGTTAATTTGGCTGAAGGGACTTGTAACAGAGATGCTAGGAGAAGAAAGTAGCATAGAGAAATGCAGTGTGATAGTGAAATATTTCGAAAAATATTGTTCACATTACATACGAGATGTTGTACAAGATGGAACCATATCACTGTGGAAAGTTGGCACAGAACACAATCCGGCGGACTTGTTTACTAAGGCGACGATGAACGAGAGATTTTCATATCTCTGTGGCCTTTTGAAGATGGGAGCTGGATACACTACTGTGGAGAAGATAAAGAGTTCTCAGGTCAACGGAGGATTTTGTTGTTTGACTTGCTTCTCCACCTCATCATTGGGCAAATAGGTGGTGTGGGTTTATTGTGCATTCTCATTCGTTGGATTATAAGTCGTAATCAGTGGTCCAAAGCTCACCACCTCATTTTATTGATTTCATTTTGTATATGCCTATTAGATGTATAAAAGAG ATGTTACTACAGCTAGCGGAAGCCATTAAGGAGTTAATTTGGCTGAAGGGACTTGTAACAGAGATGCTAGGAGAAGAAAGTAGCATAGAGAAATGCAGTGTGATAGTGAAATATTTCGAAAAATATTGTTCACATTACATACGAGATGTTGTACAAGATGGAACCATATCACTGTGGAAAGTTGGCACAGAACACAATCCGGCGGACTTGTTTACTAAGGCGACGATGAACGAGAGATTTTCATATCTCTGTGGCCTTTTGAAGATGGGAGCTGGATACACTACTGTGGAGAAGATAAAGAGTTCTCAGGTCAACGGAGGATTTTGTTGTTTGACTTGCTTCTCCACCTCATCATTGGGCAAATAG MLLQLAEAIKELIWLKGLVTEMLGEESSIEKCSVIVKYFEKYCSHYIRDVVQDGTISLWKVGTEHNPADLFTKATMNERFSYLCGLLKMGAGYTTVEKIKSSQVNGGFCCLTCFSTSSLGK Homology
BLAST of Sed0011461 vs. NCBI nr
Match: AAD32759.1 (putative retroelement pol polyprotein [Arabidopsis thaliana]) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-06 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0
BLAST of Sed0011461 vs. NCBI nr
Match: CAA7046581.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 62.4 bits (150), Expect = 3.1e-06 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Sed0011461 vs. NCBI nr
Match: CAA7062683.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 62.4 bits (150), Expect = 3.1e-06 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Sed0011461 vs. NCBI nr
Match: CAA7052282.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 62.0 bits (149), Expect = 4.1e-06 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of Sed0011461 vs. NCBI nr
Match: OAE29077.1 (hypothetical protein AXG93_1626s1040 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 61.2 bits (147), Expect = 6.9e-06 Identity = 33/103 (32.04%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Sed0011461 vs. ExPASy TrEMBL
Match: Q9SH77 (Putative retroelement pol polyprotein OS=Arabidopsis thaliana OX=3702 GN=At2g07550 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 5.2e-07 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0
BLAST of Sed0011461 vs. ExPASy TrEMBL
Match: A0A6D2KFT3 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS33816 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Sed0011461 vs. ExPASy TrEMBL
Match: A0A6D2L7N3 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS49919 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Sed0011461 vs. ExPASy TrEMBL
Match: A0A6D2KWL8 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS39517 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.0e-06 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of Sed0011461 vs. ExPASy TrEMBL
Match: A0A176W7N9 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Marchantia polymorpha subsp. ruderalis OX=1480154 GN=AXG93_1626s1040 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.4e-06 Identity = 33/103 (32.04%), Postives = 56/103 (54.37%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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