Sed0011416 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGGCAGAAGCTGAGCAACAAAGAATCAGATCATCTACAAGAAGTTACAAAAATGAGTAGCAAAGTAGTAGAAGAACAGCAACAACAAGCTGAAATAATAGAGCTACAACAGGCTGTGTGTAAGTGCTGTGGGCTGAAAGAGGAATGCACAAAACCCTACATTTTAGAGGTCCAAAGATCCTTTTCAGGGAAATGGCTTTGTGGGCTTTGTTGTGAAGCTGTAAAAGAAAAGGTCTTGAAATCTCCCAACACACCCATTGACAAAGCTGTGGACTTTCACAAGGAGTTTTATGATACTTTCAACACCACCACAAGGCTCAACCCTAAACTTTCCTTGACCAGTTCCATGAGAAAGATTGCTCGAAAAAGTTTTGAGAATCGAAACTCGAATACGCTCTCTCGAAGCGTTAGCTGTGATCCAAGGATTAGTCTTCATGACTGA ATGGAAAGGCAGAAGCTGAGCAACAAAGAATCAGATCATCTACAAGAAGTTACAAAAATGAGTAGCAAAGTAGTAGAAGAACAGCAACAACAAGCTGAAATAATAGAGCTACAACAGGCTGTGTGTAAGTGCTGTGGGCTGAAAGAGGAATGCACAAAACCCTACATTTTAGAGGTCCAAAGATCCTTTTCAGGGAAATGGCTTTGTGGGCTTTGTTGTGAAGCTGTAAAAGAAAAGGTCTTGAAATCTCCCAACACACCCATTGACAAAGCTGTGGACTTTCACAAGGAGTTTTATGATACTTTCAACACCACCACAAGGCTCAACCCTAAACTTTCCTTGACCAGTTCCATGAGAAAGATTGCTCGAAAAAGTTTTGAGAATCGAAACTCGAATACGCTCTCTCGAAGCGTTAGCTGTGATCCAAGGATTAGTCTTCATGACTGA ATGGAAAGGCAGAAGCTGAGCAACAAAGAATCAGATCATCTACAAGAAGTTACAAAAATGAGTAGCAAAGTAGTAGAAGAACAGCAACAACAAGCTGAAATAATAGAGCTACAACAGGCTGTGTGTAAGTGCTGTGGGCTGAAAGAGGAATGCACAAAACCCTACATTTTAGAGGTCCAAAGATCCTTTTCAGGGAAATGGCTTTGTGGGCTTTGTTGTGAAGCTGTAAAAGAAAAGGTCTTGAAATCTCCCAACACACCCATTGACAAAGCTGTGGACTTTCACAAGGAGTTTTATGATACTTTCAACACCACCACAAGGCTCAACCCTAAACTTTCCTTGACCAGTTCCATGAGAAAGATTGCTCGAAAAAGTTTTGAGAATCGAAACTCGAATACGCTCTCTCGAAGCGTTAGCTGTGATCCAAGGATTAGTCTTCATGACTGA MERQKLSNKESDHLQEVTKMSSKVVEEQQQQAEIIELQQAVCKCCGLKEECTKPYILEVQRSFSGKWLCGLCCEAVKEKVLKSPNTPIDKAVDFHKEFYDTFNTTTRLNPKLSLTSSMRKIARKSFENRNSNTLSRSVSCDPRISLHD Homology
BLAST of Sed0011416 vs. NCBI nr
Match: KAE8651411.1 (hypothetical protein Csa_002275 [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 4.6e-44 Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of Sed0011416 vs. NCBI nr
Match: XP_031739128.1 (uncharacterized protein LOC116402862 [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 4.6e-44 Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of Sed0011416 vs. NCBI nr
Match: XP_008466651.1 (PREDICTED: uncharacterized protein LOC103504007 [Cucumis melo]) HSP 1 Score: 185.3 bits (469), Expect = 3.9e-43 Identity = 98/157 (62.42%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Sed0011416 vs. NCBI nr
Match: XP_038899593.1 (uncharacterized protein LOC120086851 [Benincasa hispida]) HSP 1 Score: 183.0 bits (463), Expect = 1.9e-42 Identity = 94/155 (60.65%), Postives = 117/155 (75.48%), Query Frame = 0
BLAST of Sed0011416 vs. NCBI nr
Match: XP_022135903.1 (uncharacterized protein LOC111007738 [Momordica charantia]) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 0
BLAST of Sed0011416 vs. ExPASy TrEMBL
Match: A0A0A0LE54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895120 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.2e-44 Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of Sed0011416 vs. ExPASy TrEMBL
Match: A0A1S3CRY2 (uncharacterized protein LOC103504007 OS=Cucumis melo OX=3656 GN=LOC103504007 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43 Identity = 98/157 (62.42%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Sed0011416 vs. ExPASy TrEMBL
Match: A0A6J1C661 (uncharacterized protein LOC111007738 OS=Momordica charantia OX=3673 GN=LOC111007738 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 9.7e-40 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 0
BLAST of Sed0011416 vs. ExPASy TrEMBL
Match: A0A6J1FAH1 (uncharacterized protein LOC111443561 OS=Cucurbita moschata OX=3662 GN=LOC111443561 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 4.8e-39 Identity = 92/153 (60.13%), Postives = 113/153 (73.86%), Query Frame = 0
BLAST of Sed0011416 vs. ExPASy TrEMBL
Match: A0A6J1IGD0 (uncharacterized protein LOC111476691 OS=Cucurbita maxima OX=3661 GN=LOC111476691 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.4e-38 Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 0
BLAST of Sed0011416 vs. TAIR 10
Match: AT2G25780.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 119.0 bits (297), Expect = 3.2e-27 Identity = 59/127 (46.46%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of Sed0011416 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 85.5 bits (210), Expect = 3.9e-17 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 0
BLAST of Sed0011416 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16 Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Sed0011416 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15 Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Sed0011416 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13 Identity = 44/116 (37.93%), Postives = 66/116 (56.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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