Sed0011319 (gene) Chayote v1

Overview


Name	Sed0011319
Type	gene
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S6
Location	LG02: 52558884 .. 52560422 (-)
RNA-Seq Expression	Sed0011319
Synteny	Sed0011319

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTTCGGCCGTACCTTACATTTCTCTTCTTCCATTTGTACTGCAATACTAACTTACTTTGAGCTCCCCAGTTTAACATCGCCAATCCCACTACTGGGTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTGTAAGCTTTCATTCCCCTTTATTCTTCAATCTCTTCTTTCAATCATGAATGCACCATTTTTATGAGTGTTCAACCATCTAAAATCAGAAGCTTTAGCCATTCCATTCATATTCTGTTTGAATTTCTTCATGGACTAATTATCCCTTGGAGAGGTATGGGTGTGCTGTTTTGTCGTCCAATACATGAAATTTTAGTTCCTAGTTGCTGTCTCTATGAGTTTGCTGATGGAGGATTTTCCTCTTCTCAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGATTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCCAGTCCGCCTCTTACTACACAGAGGTTTGTGAAACTGTTTTTGGTTAACCCATTCAATCATATTTGTTACCCTTCTTATTTGTTTCCATTAATTTCTGGTATTATCAAACTGATACAAGTATGTGGTCGACTTTTGTGCCCAGGTACCCCGTGTTTCCGTGGTTTTGGAAGGCGTAATGGTGAATGCAGGAGGAAGTCTGTGCGTGGACCTTCCTGTTCTGAATCTGGTAATTGTGAAGAAGGGAGACAGTGACCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAACTTTTCAATCTGTCCAAGGAGGATGATGTTCGAAAGTATGTCAACACATACCCTAGAACATTCACCACAAAATCTGGTAAGGTTTACGAATGCTTTTTGTAGATTTTATACCTGTCATAACAAACTAAGTTGGTGTTTAGAGGGGCTGTGATTTTCCAACAGTGATTGCTTTCTTGATAGATGGTGCAAGTTCAAATTCGAGGTTTAAACTTCAATACTTATTTAATAAAGTTGGATAGTTAGATGGGATGTATTCGTATGACAATCTATTATTTGTATATACCCAACGTTTCTGGATGAACCTTCACTTGACATTGGATTACATTGTTGTTCAATATTGCCCGTCCCTGTTTGCTCATCTAGATGGGTTGTGCTTAATAAGGCTGGAACAAGAAAGTTATAGGGGTTAATGGTCTTGGCGACGGATTAGTCTCAGAATTTGCTTTTATACAACTTGTTTTTTGAGTTTCTGTCTATTCTGGAATAGTTTATGATGATTTGATTTGATTGGCAGGCAAAAAGGTTAGCAAAGCTCCCAAGATTCAGAGGTTAGTCACCCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCAGAGAAGAAGAAGAGAATTGTGAAAGCCAAGTCGGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAGCGTCGCAGTGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCGTCCATCGCTGCTTAG

mRNA sequence

ATGAAGTTTAACATCGCCAATCCCACTACTGGGTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTTTGCTGTCTCTATGAGTTTGCTGATGGAGGATTTTCCTCTTCTCAGGAATTCAAGGGCTATGGAGTTTTGACCCCTGGCCCAGTCCGCCTCTTACTACACAGAGGTACCCCGTGTTTCCGTGGTTTTGGAAGGCGTAATGGTGAATGCAGGAGGAAGTCTAAGGGAGACAGTGACCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAACTTTTCAATCTGTCCAAGGAGGATGATGTTCGAAAGTATGTCAACACATACCCTAGAACATTCACCACAAAATCTGGTAAGTCACCCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCAGAGAAGAAGAAGAGAATTGTGAAAGCCAAGTCGGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAGCGTCGCAGTGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCGTCCATCGCTGCTTAG

Coding sequence (CDS)

ATGAAGTTTAACATCGCCAATCCCACTACTGGGTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTTTGCTGTCTCTATGAGTTTGCTGATGGAGGATTTTCCTCTTCTCAGGAATTCAAGGGCTATGGAGTTTTGACCCCTGGCCCAGTCCGCCTCTTACTACACAGAGGTACCCCGTGTTTCCGTGGTTTTGGAAGGCGTAATGGTGAATGCAGGAGGAAGTCTAAGGGAGACAGTGACCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAACTTTTCAATCTGTCCAAGGAGGATGATGTTCGAAAGTATGTCAACACATACCCTAGAACATTCACCACAAAATCTGGTAAGTCACCCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCAGAGAAGAAGAAGAGAATTGTGAAAGCCAAGTCGGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAGCGTCGCAGTGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCGTCCATCGCTGCTTAG

Protein sequence

MKFNIANPTTGCQKKLEIDDDQKLCCLYEFADGGFSSSQEFKGYGVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKSKGDSDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKSPPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

Homology

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BLAST of Sed0011319 vs. NCBI nr
Match: XP_022131886.1 (40S ribosomal protein S6 [Momordica charantia])

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-76
Identity = 175/249 (70.28%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY RTFTTK+GK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. NCBI nr
Match: XP_022951611.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023002727.1 40S ribosomal protein S6-like [Cucurbita maxima] >XP_023538404.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo] >KAG7020222.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-76
Identity = 176/249 (70.68%), Postives = 181/249 (72.69%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY RTFTTKSGK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo] >KAG6597045.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028519.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-76
Identity = 176/249 (70.68%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY R+FTTKSGK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. NCBI nr
Match: KAG6585304.1 (40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-76
Identity = 176/249 (70.68%), Postives = 181/249 (72.69%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 93  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 152

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 153 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 212

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY RTFTTKSGK        
Sbjct: 213 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 272

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 273 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 332

[Close]

BLAST of Sed0011319 vs. NCBI nr
Match: XP_004133785.1 (40S ribosomal protein S6 [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_010258 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-76
Identity = 176/249 (70.68%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY R+FTTKSGK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.3e-73
Identity = 163/243 (67.08%), Postives = 173/243 (71.19%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   Y+        G +  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY RTFT K GK+       
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 193
                PLTLQRKR RIAEKKKR+ KAKSEAAEYQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 265.0 bits (676), Expect = 6.8e-70
Identity = 159/249 (63.86%), Postives = 170/249 (68.27%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFN+ANPTTGCQKKLEIDDDQKL   ++        G +  +EFKGY            
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG GRR GE RRKS                   KG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           SDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTY RTFT K GK        
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKR RIA+KKKRI KA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 264.6 bits (675), Expect = 8.9e-70
Identity = 159/250 (63.60%), Postives = 172/250 (68.80%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFN+ANPTTGCQKKLEIDDDQKL   Y+        G +  +EFKGY            
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG GRR GE RRKS                   KG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTY R FT K GK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 199
                PLTLQRKR RIA+KKK+I KA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 4.6e-50
Identity = 125/182 (68.68%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 45  GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGDSDLPG 104
           GVLTPG VRLLL+RGTPCFRG+GRRNGE RRKS                   KG++DLPG
Sbjct: 21  GVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPG 80

Query: 105 LTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTT--KSGKSP-------PL 164
           LTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    FTT  K  K+P       PL
Sbjct: 81  LTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAEFTTKWKGSKAPKIQRLVTPL 140

Query: 165 TLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSI 199
           TLQRKR RIA+KKKRI KAKSEAAEYQKLLASRLKEQRE+RSESLAKKRSRLSAASKPSI
Sbjct: 141 TLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQREKRSESLAKKRSRLSAASKPSI 199

[Close]

BLAST of Sed0011319 vs. ExPASy Swiss-Prot
Match: Q5E995 (40S ribosomal protein S6 OS=Bos taurus OX=9913 GN=RPS6 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.0e-38
Identity = 113/242 (46.69%), Postives = 135/242 (55.79%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MK NI+ P TGCQK +E+DD++KL   YE          +  +E+KGY            
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLT G VRLLL +G  C+R   RR GE +RKS                   KG+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKSP------ 180
            D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   P     K GK P      
Sbjct: 121 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKP---LNKDGKKPRTKAPK 180

Query: 181 ------PLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL 191
                 P  LQ KR RIA KK+R  K K EAAEY KLLA R+KE +E+R E +AK+R RL
Sbjct: 181 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RL 236

[Close]

BLAST of Sed0011319 vs. ExPASy TrEMBL
Match: A0A6J1ICI3 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 176/249 (70.68%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY R+FTTKSGK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. ExPASy TrEMBL
Match: A0A6J1KKB1 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111496500 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 176/249 (70.68%), Postives = 181/249 (72.69%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY RTFTTKSGK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. ExPASy TrEMBL
Match: A0A0A0L5R5 (40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 176/249 (70.68%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY R+FTTKSGK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. ExPASy TrEMBL
Match: A0A6J1BQQ2 (40S ribosomal protein S6 OS=Momordica charantia OX=3673 GN=LOC111004918 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 175/249 (70.28%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY RTFTTK+GK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. ExPASy TrEMBL
Match: A0A6J1G9P2 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 176/249 (70.68%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFNIANPTTGCQKKLEIDDDQKL   ++        G S  +EFKGY            
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG+GRRNGE RRKS                   KGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY R+FTTKSGK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKRGRIAEKKKRI KAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e )

HSP 1 Score: 265.0 bits (676), Expect = 4.8e-71
Identity = 159/249 (63.86%), Postives = 170/249 (68.27%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFN+ANPTTGCQKKLEIDDDQKL   ++        G +  +EFKGY            
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG GRR GE RRKS                   KG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           SDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTY RTFT K GK        
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 199
                PLTLQRKR RIA+KKKRI KA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 )

HSP 1 Score: 264.6 bits (675), Expect = 6.3e-71
Identity = 159/250 (63.60%), Postives = 172/250 (68.80%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFN+ANPTTGCQKKLEIDDDQKL   Y+        G +  +EFKGY            
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGD 120
                GVLTPG VRLLLHRGTPCFRG GRR GE RRKS                   KG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS------- 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTY R FT K GK        
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 ----PPLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 199
                PLTLQRKR RIA+KKK+I KA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

[Close]

BLAST of Sed0011319 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 )

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-56
Identity = 129/185 (69.73%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 45  GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-------------------KGDSDLPG 104
           GVLTPG VRLLLHRGTPCFRG GRR GE RRKS                   KG++DLPG
Sbjct: 4   GVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPG 63

Query: 105 LTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKS-----------P 164
           LTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTY R FT K GK             
Sbjct: 64  LTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVT 123

Query: 165 PLTLQRKRGRIAEKKKRIVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASK 199
           PLTLQRKR RIA+KKK+I KA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL SAA+K
Sbjct: 124 PLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAK 183

[Close]

BLAST of Sed0011319 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e )

HSP 1 Score: 175.6 bits (444), Expect = 3.9e-44
Identity = 117/220 (53.18%), Postives = 134/220 (60.91%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLCCLYE----FADGGFSSSQEFKGY------------ 60
           MKFN+ANPTTGCQKKLEIDDDQKL   ++        G +  +EFKGY            
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  -----GVLTPGPVRLLLHRGTPCFRGFGRRNGECRRKS-KGDSDLPGLTDTEKPRMRGPK 120
                GVLTPG VRLLLHRGTPCFRG GRR GE RRKS +G    P L+      ++  K
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGK 120

Query: 121 RASKIRKLFNLSKEDDVRKYVNTYPRTFTTKSGKSPPLTLQRKRGRIAEKKKRIVKAKSE 180
           + SK  K+  L                         PLTLQRKR RIA+KKKRI KA S+
Sbjct: 121 KVSKAPKIQRL-----------------------VTPLTLQRKRARIADKKKRIAKANSD 180

Query: 181 AAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA 199
           AA+YQKLLASRLKEQR+RRSESLAKKRSRLS+A    +AA
Sbjct: 181 AADYQKLLASRLKEQRDRRSESLAKKRSRLSSAPAKPVAA 197

The following BLAST results are available for this feature:

BLAST of Sed0011319 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131886.1	2.7e-76	70.28	40S ribosomal protein S6 [Momordica charantia]	[more]
XP_022951611.1	2.7e-76	70.68	40S ribosomal protein S6-like [Cucurbita moschata] >XP_023002727.1 40S ribosomal...	[more]
XP_022948606.1	2.7e-76	70.68	40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal prot...	[more]
KAG6585304.1	2.7e-76	70.68	40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004133785.1	2.7e-76	70.68	40S ribosomal protein S6 [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_...	[more]

BLAST of Sed0011319 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3V8	2.3e-73	67.08	40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1	[more]
P51430	6.8e-70	63.86	40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3	[more]
O48549	8.9e-70	63.60	40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2	[more]
P29345	4.6e-50	68.68	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV...	[more]
Q5E995	4.0e-38	46.69	40S ribosomal protein S6 OS=Bos taurus OX=9913 GN=RPS6 PE=2 SV=1	[more]

BLAST of Sed0011319 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICI3	1.3e-76	70.68	40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1	[more]
A0A6J1KKB1	1.3e-76	70.68	40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111496500 PE=3 SV=1	[more]
A0A0A0L5R5	1.3e-76	70.68	40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1	[more]
A0A6J1BQQ2	1.3e-76	70.28	40S ribosomal protein S6 OS=Momordica charantia OX=3673 GN=LOC111004918 PE=3 SV=...	[more]
A0A6J1G9P2	1.3e-76	70.68	40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1	[more]

BLAST of Sed0011319 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10360.1	4.8e-71	63.86	Ribosomal protein S6e	[more]
AT4G31700.1	6.3e-71	63.60	ribosomal protein S6	[more]
AT4G31700.2	1.2e-56	69.73	ribosomal protein S6	[more]
AT5G10360.2	3.9e-44	53.18	Ribosomal protein S6e	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..165
None	No IPR available	GENE3D	1.20.5.2650		coord: 93..183 e-value: 1.7E-26 score: 94.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..186
None	No IPR available	PANTHER	PTHR11502:SF22	40S RIBOSOMAL PROTEIN S6-LIKE	coord: 78..198
None	No IPR available	PANTHER	PTHR11502:SF22	40S RIBOSOMAL PROTEIN S6-LIKE	coord: 39..77
None	No IPR available	PANTHER	PTHR11502:SF22	40S RIBOSOMAL PROTEIN S6-LIKE	coord: 1..29
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 1..88 e-value: 2.5E-14 score: 63.6
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 78..198
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 1..29
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 39..77
IPR014401	Ribosomal protein S6, eukaryotic	PIRSF	PIRSF002129	RPS6e	coord: 1..44 e-value: 5.3E-8 score: 30.4 coord: 77..198 e-value: 7.2E-33 score: 111.8 coord: 32..79 e-value: 4.4E-7 score: 27.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011319.1	Sed0011319.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome