Sed0011311 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTGGGCATAAACCAATCTACCACAAATTCTTTGGGCTCAAGTGGCCCAAGGCTGGCACTAACAAAAGAGGCCTGCTTTAAGGTGCGTGCCCAAATTGGGTTCTATCCATGGCAGCGCAGCAAGGTAATCGGGTGGAAGCTATCCTGTTATCTTCTTCTGAATCTAGAAACTAGTGTTTGTTGTGTTGGATATGAGCGCCATAACAATTTCAGCTGGGGCTGCCACTCCCAGAACACGTTGCTCCGTCCACACAGATAAATATGTAGCGACGAAACAAGTCTCAAAATTTAGGTACACCCACATCCCAAAAATCTCTTTTTCTCATGAAGAACGGGAAGTGAAGGAGAATCCAGGTTCATTAGGCAGAAGAGAAGCAATTGGCCGTGGATTCCTGTTTGGCGTTGCCAACATTGTTGTACAGCCACTGAGTGCAGCTGCTGAAGCTACATCATGTGAATTCAGAACAGCTCCATCAGGCCTTGGGTTCTGCGATAAAGTTGTGGGAACAGGCCCTGAGGCTGAGAAAGGACAGTTAATCAAGGTAATTTCTTTGTCTACCATATATATAATAGTTTGATGTTGAATCGTGGTAGGCGTAGTGTGTTTGTATGAACATAAATTGGTGATTGGATGCTTGGTTTTGTAGGCACACTATGTTGGAAAATTAGAAAGCGGAAAGGTGTTTGACAGCAGCTACAACCGGGGGAAACCATTAACCTTCCGAGTTGGGGTTGGTGAGGTATGGAGAAACATTGGATTGGGGAAGGAACTAAAATGATCTCATTATTGACTCGTGGAAGTGAAATAAATTAAAATGTTCACTTCAGGTTATAAAAGGCTGGGATGAAGGCATTCTTGGAGGGGATGGAGTTCCTGCAATGCTTCCGGGTACGTCCACTTCATTTATCATATGGAATTGTTAATTTTAATGGTTTTTTTGAAGTGTTTTTTTTTTACAGCATTTGTACTGGGAATTTCAAACGTATAACCTTTTTTATTAGTACTAGGTTGTACATATGATGTCATTGGACCGCTCCTTTTGACTTAATTGGAATGGTTTTGTAATTGTGTGTTGTGTGTTGTGTGGTTTGTGAAGGAGGGAAGCGAGTGCTAAAGCTTCCTCCAGAACTTGGGTATGGCGCAAGAGGTGCTGGATGTAGAGGAGGTACACCAATGAAATGTTTACTCTTTTTTTTTCAAGTACATAAATTGGAACTTGTGAACTCTCTCTGTGGAAGATATACGTTACTTACCCTATCCTGATTGTACTTAGTGTGTTGAGTTATTTTGATTTTGATTATGTAGGGTCTTGTATCATTCCTCCTAACTCGATTCTCCTATTTGACGTGGAGTACCTTGGGAAGCCATAATCGACATCAAAACTAAAACGGCATCTACAAGCCAACAAGTCAGATTATTCTAAATTCTTGTATAACATCAAAAACGAATTCTAAACCCATTTTCACTTGTTATGGAGAATTCTCTTTCTGAAATCCCTCTCACAACTCAGCTCATCACAACCAACATCTCATTTAGCAGCCTAGCACGATCTTTAATTAGACCTAATTTGTACTTAGTTCAACTTGTCACAACCAACATCTCACAACTCAGCTCATCACAACCAACACAATTGCTAAGCCATCAAAATTAACTGTGTTTATATATATAATACATAACTGTAAAATAAAATATTCAACTTGTCAATTGATTGAAGTTCATTACAATTTTGATTGATATGAATATTAGAAAACTCTAATTACATTTGCAAGTATAATCGACAAAATTCTCAACTTCATGTTAACTTCTATTCGTATGCTCGATTTATGATATTTATAAACTATTAACAATATTTTATCAGTAATTTGAATTAATAAACATTAATATACGAGCCGACTTTATCAGTGTCACTAAGGTCTCGTTTGATAACGTTTTCGTTTCCTGTTTCTTGTTTAAGAATAAGTAAAAGGATGTTGATACTTGATAGTTTACTTCTCAAGAGGGCACATAAACGGTGCGTGGTTGAGCGCTTGGCTTTGATGGTGTACTCCTTTCAAGATCTCAAATTCGAGGAGGTTGTGGTGATTAATTTTTTAGGTGGATCTCAATTTGGCTTTTGGTCCTACGATATAAGGATGGATCAGTGGTGCTCCCGGATTTAGAGAAGCAAAGGTCCAAGTTCATCGGGTCATAAAAGAATAGATGTAGCTTATACGACCTTAAATTATTTTATTTTCCATATGCAATATCAGTAAGCGTTTTATTTCTGTGTAACTTATAAATCAATTTTTTTGTAACACACATCTATCCATCTATATGTTGGTTTTGAAGTTCCAATATCTGATTTGATTTCACAGATACGAGCATTCGTTCCAGGGTTATTTGCCTTTACGATAGGCAATGGATTAAACCAAAGATATTTCAACATCTGAAGAGACTGGCACATTGAGACACTTATAGACTACTGCATCGGTTCTCATTGAGATTTTAAACTTCTGCATCATATGATCAAGTGATTCGTAGCAATTTATCTACTTTCAATGAACACGTTTTGCGAGGGGATAAATATTTTTATGAGGTTGAAATAGATTTTCCTTTTTTTTTACCGGGTAATCGAAACTTTGCTCCATTATAACAGAGGTAATCACGCCCGTTCTGAGGCCAAGCACCGAAAGACATCGAAGAAATGGAGAAACGAGAGGTGTCTACACATTAATGTCACATGTAAATCTCGAACTTTGGATCTTGAGGGGAGCACGCCTTCAAAGTCCAAGTCTTTAACCACTATGTCGCCCCTTCTAAGCTTACGAACCATTGAGGGTTAAAAGATTACTCCTATATGCATATATGCAGAGGCTCTGAAACATAACATACCTAAAGATTCATGTCACCTTAGATTATGGAGCATTAAGGATTAGAAAATCAGTACCGT GGTTGGGCATAAACCAATCTACCACAAATTCTTTGGGCTCAAGTGGCCCAAGGCTGGCACTAACAAAAGAGGCCTGCTTTAAGGTGCGTGCCCAAATTGGGTTCTATCCATGGCAGCGCAGCAAGGTAATCGGGTGGAAGCTATCCTGTTATCTTCTTCTGAATCTAGAAACTAGTGTTTGTTGTGTTGGATATGAGCGCCATAACAATTTCAGCTGGGGCTGCCACTCCCAGAACACGTTGCTCCGTCCACACAGATAAATATGTAGCGACGAAACAAGTCTCAAAATTTAGGTACACCCACATCCCAAAAATCTCTTTTTCTCATGAAGAACGGGAAGTGAAGGAGAATCCAGGTTCATTAGGCAGAAGAGAAGCAATTGGCCGTGGATTCCTGTTTGGCGTTGCCAACATTGTTGTACAGCCACTGAGTGCAGCTGCTGAAGCTACATCATGTGAATTCAGAACAGCTCCATCAGGCCTTGGGTTCTGCGATAAAGTTGTGGGAACAGGCCCTGAGGCTGAGAAAGGACAGTTAATCAAGGCACACTATGTTGGAAAATTAGAAAGCGGAAAGGTGTTTGACAGCAGCTACAACCGGGGGAAACCATTAACCTTCCGAGTTGGGGTTGGTGAGGTTATAAAAGGCTGGGATGAAGGCATTCTTGGAGGGGATGGAGTTCCTGCAATGCTTCCGGGAGGGAAGCGAGTGCTAAAGCTTCCTCCAGAACTTGGGTATGGCGCAAGAGGTGCTGGATGTAGAGGAGGGTCTTGTATCATTCCTCCTAACTCGATTCTCCTATTTGACGTGGAGTACCTTGGGAAGCCATAATCGACATCAAAACTAAAACGGCATCTACAAGCCAACAAGTCAGATTATTCTAAATTCTTGTATAACATCAAAAACGAATTCTAAACCCATTTTCACTTGTTATGGAGAATTCTCTTTCTGAAATCCCTCTCACAACTCAGCTCATCACAACCAACATCTCATTTAGCAGCCTAGCACGATCTTTAATTAGACCTAATTTGTACTTAGTTCAACTTGTCACAACCAACATCTCACAACTCAGCTCATCACAACCAACACAATTGCTAAGCCATCAAAATTAACTGTGTTTATATATATAATACATAACTGTAAAATAAAATATTCAACTTGTCAATTGATTGAAGTTCATTACAATTTTGATTGATATGAATATTAGAAAACTCTAATTACATTTGCAAGTATAATCGACAAAATTCTCAACTTCATGTTAACTTCTATTCGTATGCTCGATTTATGATATTTATAAACTATTAACAATATTTTATCAGTAATTTGAATTAATAAACATTAATATACGAGCCGACTTTATCAGTGTCACTAAGGTCTCGTTTGATAACGTTTTCGTTTCCTGTTTCTTGTTTAAGAATAAGTAAAAGGATGTTGATACTTGATAGTTTACTTCTCAAGAGGGCACATAAACGGTGCGTGGTTGAGCGCTTGGCTTTGATGGTGTACTCCTTTCAAGATCTCAAATTCGAGGAGGTTGTGGTGATTAATTTTTTAGGTGGATCTCAATTTGGCTTTTGGTCCTACGATATAAGGATGGATCAGTGGTGCTCCCGGATTTAGAGAAGCAAAGGTCCAAGTTCATCGGGTCATAAAAGAATAGATGTAGCTTATACGACCTTAAATTATTTTATTTTCCATATGCAATATCAATACGAGCATTCGTTCCAGGGTTATTTGCCTTTACGATAGGCAATGGATTAAACCAAAGATATTTCAACATCTGAAGAGACTGGCACATTGAGACACTTATAGACTACTGCATCGGTTCTCATTGAGATTTTAAACTTCTGCATCATATGATCAAGTGATTCGTAGCAATTTATCTACTTTCAATGAACACGTTTTGCGAGGGGATAAATATTTTTATGAGGTTGAAATAGATTTTCCTTTTTTTTTACCGGGTAATCGAAACTTTGCTCCATTATAACAGAGGTAATCACGCCCGTTCTGAGGCCAAGCACCGAAAGACATCGAAGAAATGGAGAAACGAGAGGTGTCTACACATTAATGTCACATGTAAATCTCGAACTTTGGATCTTGAGGGGAGCACGCCTTCAAAGTCCAAGTCTTTAACCACTATGTCGCCCCTTCTAAGCTTACGAACCATTGAGGGTTAAAAGATTACTCCTATATGCATATATGCAGAGGCTCTGAAACATAACATACCTAAAGATTCATGTCACCTTAGATTATGGAGCATTAAGGATTAGAAAATCAGTACCGT ATGAGCGCCATAACAATTTCAGCTGGGGCTGCCACTCCCAGAACACGTTGCTCCGTCCACACAGATAAATATGTAGCGACGAAACAAGTCTCAAAATTTAGGTACACCCACATCCCAAAAATCTCTTTTTCTCATGAAGAACGGGAAGTGAAGGAGAATCCAGGTTCATTAGGCAGAAGAGAAGCAATTGGCCGTGGATTCCTGTTTGGCGTTGCCAACATTGTTGTACAGCCACTGAGTGCAGCTGCTGAAGCTACATCATGTGAATTCAGAACAGCTCCATCAGGCCTTGGGTTCTGCGATAAAGTTGTGGGAACAGGCCCTGAGGCTGAGAAAGGACAGTTAATCAAGGCACACTATGTTGGAAAATTAGAAAGCGGAAAGGTGTTTGACAGCAGCTACAACCGGGGGAAACCATTAACCTTCCGAGTTGGGGTTGGTGAGGTTATAAAAGGCTGGGATGAAGGCATTCTTGGAGGGGATGGAGTTCCTGCAATGCTTCCGGGAGGGAAGCGAGTGCTAAAGCTTCCTCCAGAACTTGGGTATGGCGCAAGAGGTGCTGGATGTAGAGGAGGGTCTTGTATCATTCCTCCTAACTCGATTCTCCTATTTGACGTGGAGTACCTTGGGAAGCCATAA MSAITISAGAATPRTRCSVHTDKYVATKQVSKFRYTHIPKISFSHEEREVKENPGSLGRREAIGRGFLFGVANIVVQPLSAAAEATSCEFRTAPSGLGFCDKVVGTGPEAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPPELGYGARGAGCRGGSCIIPPNSILLFDVEYLGKP Homology
BLAST of Sed0011311 vs. NCBI nr
Match: XP_038877522.1 (peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Benincasa hispida]) HSP 1 Score: 354.0 bits (907), Expect = 9.1e-94 Identity = 171/213 (80.28%), Postives = 188/213 (88.26%), Query Frame = 0
BLAST of Sed0011311 vs. NCBI nr
Match: XP_008439427.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X1 [Cucumis melo] >KAA0052418.1 peptidyl-prolyl cis-trans isomerase FKBP13 [Cucumis melo var. makuwa]) HSP 1 Score: 354.0 bits (907), Expect = 9.1e-94 Identity = 170/213 (79.81%), Postives = 185/213 (86.85%), Query Frame = 0
BLAST of Sed0011311 vs. NCBI nr
Match: XP_004134516.1 (peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X1 [Cucumis sativus] >KGN49539.1 hypothetical protein Csa_003904 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92 Identity = 169/213 (79.34%), Postives = 184/213 (86.38%), Query Frame = 0
BLAST of Sed0011311 vs. NCBI nr
Match: XP_022925594.1 (peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X2 [Cucurbita moschata] >XP_023544801.1 peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X3 [Cucurbita pepo subsp. pepo] >KAG6581529.1 Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 348.2 bits (892), Expect = 5.0e-92 Identity = 172/213 (80.75%), Postives = 187/213 (87.79%), Query Frame = 0
BLAST of Sed0011311 vs. NCBI nr
Match: XP_022978964.1 (peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X2 [Cucurbita maxima]) HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91 Identity = 171/213 (80.28%), Postives = 186/213 (87.32%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy Swiss-Prot
Match: Q9SCY2 (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP13 PE=1 SV=2) HSP 1 Score: 247.7 bits (631), Expect = 1.2e-64 Identity = 130/219 (59.36%), Postives = 157/219 (71.69%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy Swiss-Prot
Match: Q9SCY3 (Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL4 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 5.3e-36 Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy Swiss-Prot
Match: P56989 (FK506-binding protein OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=fbp PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.7e-23 Identity = 57/105 (54.29%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy Swiss-Prot
Match: P0A0W2 (FK506-binding protein OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=fbp PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 59/114 (51.75%), Postives = 72/114 (63.16%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy Swiss-Prot
Match: P0A0W3 (FK506-binding protein OS=Neisseria meningitidis serogroup C OX=135720 GN=fbp PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.6e-22 Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy TrEMBL
Match: A0A5A7UB40 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00130 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 4.4e-94 Identity = 170/213 (79.81%), Postives = 185/213 (86.85%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy TrEMBL
Match: A0A1S3AYS0 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484240 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 4.4e-94 Identity = 170/213 (79.81%), Postives = 185/213 (86.85%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy TrEMBL
Match: A0A0A0KL42 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G538680 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92 Identity = 169/213 (79.34%), Postives = 184/213 (86.38%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy TrEMBL
Match: A0A6J1ECL9 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111432980 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.4e-92 Identity = 172/213 (80.75%), Postives = 187/213 (87.79%), Query Frame = 0
BLAST of Sed0011311 vs. ExPASy TrEMBL
Match: A0A6J1IVG8 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111478756 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91 Identity = 171/213 (80.28%), Postives = 186/213 (87.32%), Query Frame = 0
BLAST of Sed0011311 vs. TAIR 10
Match: AT5G45680.1 (FK506-binding protein 13 ) HSP 1 Score: 247.7 bits (631), Expect = 8.5e-66 Identity = 130/219 (59.36%), Postives = 157/219 (71.69%), Query Frame = 0
BLAST of Sed0011311 vs. TAIR 10
Match: AT4G39710.1 (FK506-binding protein 16-2 ) HSP 1 Score: 152.5 bits (384), Expect = 3.7e-37 Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of Sed0011311 vs. TAIR 10
Match: AT4G39710.2 (FK506-binding protein 16-2 ) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22 Identity = 54/113 (47.79%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Sed0011311 vs. TAIR 10
Match: AT4G25340.1 (FK506 BINDING PROTEIN 53 ) HSP 1 Score: 101.3 bits (251), Expect = 9.9e-22 Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 0
BLAST of Sed0011311 vs. TAIR 10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2 ) HSP 1 Score: 96.3 bits (238), Expect = 3.2e-20 Identity = 48/101 (47.52%), Postives = 62/101 (61.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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