Sed0011306 (gene) Chayote v1

Overview
NameSed0011306
Typegene
OrganismSechium edule (Chayote v1)
Descriptionpolyadenylate-binding protein RBP47B'
LocationLG05: 8070485 .. 8076272 (+)
RNA-Seq ExpressionSed0011306
SyntenySed0011306
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTATATTAGCGTACTTGGGAGTTCTGGTCCGGCGAGGGAAACCCTAGACGGAGCAAGTGTGAAGAGTTCGCAGGTTTATTCAAAACCTCTTCAATTTTTCATGTTTATACCGTAATTTGATTATCAAGCACTCGGTTTCCCCCCAAGTTTTGCCCCAAAATCTGTAGATTCACCGATCCATTCACAGATTGGGTGGAATCGGAGCATCATACACAGTACACAAACAAGCCAATTACCGAAGCAAGTTAAGCCAATGCGTCAGTAGATTCGATGGCGACTATGGCAGGCCAACCAGCGCACCATCAACCAACTACGCTCGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCCTACCTTAATTCTTGCTTTGCTCACTCCGGCGAGGTTCGTTCACTTGTTTTTCTTTAATTATAACCACTTTCTGTGTTAAATGATTGTACTCAAGTTGTTAAAGGTGTGTAAGTGGTTTTTCAATTTTGGCTATGCATTATACGATTGTTATATAGGTATGGAATTGGTCAGTTTTGTTATACTATTTGGAGGTGAATTTGGGTGCATTGAATACGAATGTGTTGGGTGTATTGTTCTATTTCTGTGGGAGATGAACAACGGGGAGGGCTTTTCTTATGACGTTTCATGCTACCCACTGGGGATGAGTTCAATGCTTGAGATTATTATGAAAACAGAACAACAATCAAAGGAAACAATAAAGAAAACGTGAGAGAAAACACTCAGATTTACATGGTTTATTAACCATGTGTTAACTATGTCCACGGGTGGAAGAGAGAATGGTTTTATTTAGGAGATACAAAATACATGATGTCGATTAAATGTGGCTAAGGTTTTAAGAAAGTTTGTACAGTGGACTCTCATCAAACCCCATTACAAAATATGGCCCAAATACGAAAATATAAACTAAATTACATATTTTGCCTTGGTTTCAGGGGCGATGCTTCTGAGCTCCCTCCCGGGAGATTGGGAAGTGAGACCCCCGGCTAATTAATCATGAGGCACCATAGTTCAAAGATACATCTCAACAATGATAATAACCCATACGAATATGTTATTGGATCTTGATGTCTATTAGTTGTCTTTTGTGTTTTTTGTATTTGAGTAGGAGCTTTGTTAATTAATTCTTCTCTTTTTCAGGTAGTATCAATTAAAATTATTCGCAATAAGATCACTGGGCAACCCGAGGGTTATGGATTTGTGGAGTTTGTTTCCCATGCGGCAGCAGAAAGAATTTTGCAGACTTACAATGGGGCACAGATGCCTGGGACTGAACAAACTTTCAGGTTGAATTGGGCCTCTTTTGGGACTGGAGAAAGGCGCCCTGATGCTGGCCCTGAGCATTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGATTATCTGCTGCAGGAGACCTTTAGAGCGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAATACTGGACGTTCAAAGGGCTATGGGTTTGTTAAATTTTCTGATGAAAACGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGTAGCAACGCCCAAAAAGACCACTGGTGTTCAGCAGCAATATAGTCTAGGTAAAGGTAATATACATCACTGCCTTTTATTTTCTCCACATAGTCATTCTCACGTTTTCTAATATTCTTGTAACTCACATGGAGTGGCTATGGCTATAAGCTCTTTAGCCATCCACTCTAGTTTCTAGCCCTTACTTTTTTATTTGCATGAAACTGGTCTGTTTCCTGTCTGTGCCAGTCAAAGATATAAAGCGGGTTGGCTTTAAAATTTGAGTTTCACCTTTGTCAATGAATGCTATCTTTTGGAGATTGTGAAGAATCAATTTTTTTACATCAATAAACCTCAACTAGGAGTTCTGTAGTTACAAATGGTCCCTAAAAGTATAAAGTTTTAGCAGATATGAAATTACATTGGTGTTCTTAGACTAAGAAGCACAGACACGGACAAGAGATACGGATATGTAAACACACAATTATTTAAAAATGAAGGACATGGATACATCGAGGATATGCAATTTATTATTATTTTTTATAATATACTATTAAAAAATGAAATCCAAAATATTTTAGCTAGTTATAACTATAAGCCTACCCATAATAATCTTTAAATATTTTAGTTTTTATCTCATTTTCCCTCCCTCCATTTTATTTTCTCTCTTTCTTTTCTTTTTTCATTATAGTCCATCTATCTTTGATAGACATTGTTGTCGACGGCCTCCGCCACCACTACCCGTGGTCGTATCATCCGCCATTGGAAACAAATAAGTTTTAATTGAGGTGTCTATGAAGTGTCCAAAATTGAAAATAATAATAATAGAGGACACAAAATTGAGTGTCGGACACGTGTCCAACGAGTGTCCAGAAGTATCGGTGTCGGACACGAGTATGACACGGATACGTTGTCAAAATAGAAGTGTTCGTGCTTCCTAGTTCTTAGATTTAATATGAAAACTTATCGAAGTTTATATTTAAGTATAAGAATGTTTATGTCAAAATATAATTTTTTTTTCTTGGATAATAGTTATTCAGTGTCAAAAATATTTTCTTAATGCCTTGTGAGAGATCATGGATTAGCCTAGTGGTCAAAAAAGGGTTTTCAGATCTAAGAGGTTATGGATTCAATCCATGGTTATCACGTACCTAGGAATAAATTTCCTACGGATTTCTTGACAACTAAATATTTTTTTTTCTTTAAATATTCATGAGTGTTTGGGCTAGCTTAGCGCATCTCGACCATTCTCACGGGACATACCGTCTGACCCTTATTAGCATTTGGATGTCAAGGAAACTCGTAAAAAATTAATTTCTTAGTAGGTGACCACCATGGATTGAAACCATCACCTCTTAGTTCTCAAGACCCTCTTGAACACTAGGTCAATCCATGATGATTGACAACTAAATCTTGTAGGATTAGATGGTTTGTCTTGTGAGAATAGTTGAGGTACCCTTATGCTGACTGAGCCAGACACTCCAGATATTAATATAAAATGCCTTGTTGTAGAGGATATCTGCTGAATTAAGAATGAAAAAGAATTGATTGTTGTTATTATTTTTCTTTCACCTGAAGAGAATCTTAGGAGGAGATAGTAATTTACTATTTTTGAACTCGTACTTACCAATGTGCTCTTGTCTCAGCAATGTACCCAGTTCCAGCCTACACTACACCCGTGCCTGTGCTTCCAGCTCCAGCAGGTTATGATGCGGATAACACAACTGTAAGTGAAGTGACAGTGTTACTCTTTCTGGTTTTTGTGCTTTCTCTCACTACGTTGCTGGTTATGCAGATCTTTGTTGGCAACTTGGATCCTAATATTACCGAGGAGGAGCTGAAGCAAACGTTTTTGCAGTTTGGTGAGATTGTTTATGTGAATATTCCTGCTGTGAAAGGCTATGGTTTTGTTCAGTTTGGTTCGAGGTATGTTTAGCATGATTAACTTTATTGATGTAAGTCGAGTAAATTGCATATCTTCTTGCTCTTGTTCCTATGTTTTGAAAGCAGACTGCAAATGAAAATAATGGTCAGGGAGTGGGAGAAAGAAAATTCTTATTAACTTCACATTCTTGAGTTGTGGGATTAAATATGTTCTCCTACTTGTAACCATGCAGGGCTTCAGCTGAAGAAGCCATTCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAATTCCAGCCACCAATCAGGTAATTGACCTATTGCGGTCCAGAACAAATATTTTATTTTAATTATTAAAATCAAATTTCCTTTGTTGATGTGTTAGGTAATTATGTTGTTTATCAATGCTTGGGTACAAATTTCAAAACTCTGATTGCACAACCAGTTTGTGTATAAACGGTATCGTTTTTTGTTTAGCCTGTGAATTTGAAATATCATCTTTAGGGAAAGAAAGCTTACATGTAATCATAGTAAATATTATTCTTTTGCATTTTTTTGTAAATGTTAAAACATCATGGTATGAAAATAAGATCTAACGAAAAAGTCTGAGGGCATGCCCTCATAAAACTACATATGACAAAATCATCAAGCCTATACCAGACAAATCATTTACGAAGTTATACCAGGTTCAATCACTTACTAAATGTATTACGTATGGTTTAAAATATTGTACTTCGTCAAAAAAAAAAAAATTATTAAAAAACTTTGACTTTCCATATTTTCTGTACTTGCCTTGGTTCATTGGTTATGCTTAAGCATGTCTACTTCTCTGTTAGCAAGCTCTCACAATAACCCGCATAATGCTCATAGCGAACTAGAGCTTGCTGTTTTGATTAGCCTTTGATTTTGATGAGAATGGTGATTGTTTTGTAGGACATGGCTACGTGGGGTCAGCAAGTTATACCGAGTGTTTACTATAGTGGCTATGGAGGAGCTTATGATGCTTATGGTTATGGGGCTGTACAAGATCCATCTTTATATGCATATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTAAGTTTCATTCTTTTTAGGCATCTTTGTGCAATAGATATAAACTCTCCAAGTAGATAATAAGCCGAGTGATTGTTATCATCTATTTGTCTGCAGCCATTTGCAATTGGAGTCCTTTGAGTGAATTCAATTGTTCTTTCAGGATGCTAAGGCTTAGAATCGGAATAAAATGTGTGGGAATCATTGCAATATATTTATAGAAAATGGTCGATCTAATTCAGAAAATCTATTTTTGATGATCCTGCAACTATTTATATGAACTCTTTTCTTTTAGGTTGACGGTGTACAAGATTTGACCGCCGTAGCCGGTGCTGTCCCTGCGGTGGAACAGGGGGAGGAATGGAATGATACGCTGGGCACACCAGATGTTGAGTAGTAAGTATTTTTCCTCTTTTGTTCCTTATTGAAGATTTATAGACTTACATAAACTTGCATTGACATCAAACTATGGATTTGGCAGTTTGAATAATGCATACCTCTCGAAACACGAAAGCGGCATTCTAGGGTGGCCGTTATGGTTGACTACCTCATCACTGGTTAGGCAAACATGAGCTTGATGCTTCTTGTGTCCGTGGTCTGTAGTAATAGGGTTGTCACTGTGCAAAGGGCAGCTGGAGGAAAAATATGGTATGTGCTTATATACGCTTGACCATACTCGGGGTAGATGATATCGACATTATACTGTTGCCGTGTGCTTTAAAAGATCAGTGCGCTTAATTTAATAATTCATTTTTCCTCTATACGAACGGGGTTGCGGGGTTAGGTGCTTTATCTATATATTTAATGATGCTCTCTGCTGTTTGGAAAGGTAGTTTTCGTATCAGGAGAACATCTGTGCTTTGATCTGTTTCCCATATTCATATAGTCAACTATAGTCAATGTCTTTCATTTGGGTTTGTCTGTGTTTTAACAGGTAGCTTTAGCTGATAAACTGTTTCGTCGGTTGCGATTTTGCAAAAAGAAAATGAAAGCTGAAATGAGATGACGTTTTTATTGGAAGGAGTGATGGTTGTTGCTAAATAAAACAAATTCTCAATATTCTAGAAATTTGGCTATTTTAACTTTTTTTCTTGTCTATCTAATTTGGAGAAAATCACTATCCTTCTACTCGTGTCAATGAGGGATCATTACTGATTTCAAGTCTTTTTTTAAACTTGGAAGATTAGGTAGAAAATAATTATAAATATGGTTACTTTTTTAAAAAAATTATTAATTAGGG

mRNA sequence

AATTTATATTAGCGTACTTGGGAGTTCTGGTCCGGCGAGGGAAACCCTAGACGGAGCAAGTGTGAAGAGTTCGCAGGTTTATTCAAAACCTCTTCAATTTTTCATGTTTATACCGTAATTTGATTATCAAGCACTCGGTTTCCCCCCAAGTTTTGCCCCAAAATCTGTAGATTCACCGATCCATTCACAGATTGGGTGGAATCGGAGCATCATACACAGTACACAAACAAGCCAATTACCGAAGCAAGTTAAGCCAATGCGTCAGTAGATTCGATGGCGACTATGGCAGGCCAACCAGCGCACCATCAACCAACTACGCTCGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCCTACCTTAATTCTTGCTTTGCTCACTCCGGCGAGGTAGTATCAATTAAAATTATTCGCAATAAGATCACTGGGCAACCCGAGGGTTATGGATTTGTGGAGTTTGTTTCCCATGCGGCAGCAGAAAGAATTTTGCAGACTTACAATGGGGCACAGATGCCTGGGACTGAACAAACTTTCAGGTTGAATTGGGCCTCTTTTGGGACTGGAGAAAGGCGCCCTGATGCTGGCCCTGAGCATTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGATTATCTGCTGCAGGAGACCTTTAGAGCGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAATACTGGACGTTCAAAGGGCTATGGGTTTGTTAAATTTTCTGATGAAAACGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGTAGCAACGCCCAAAAAGACCACTGGTGTTCAGCAGCAATATAGTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACACCCGTGCCTGTGCTTCCAGCTCCAGCAGGTTATGATGCGGATAACACAACTATCTTTGTTGGCAACTTGGATCCTAATATTACCGAGGAGGAGCTGAAGCAAACGTTTTTGCAGTTTGGTGAGATTGTTTATGTGAATATTCCTGCTGTGAAAGGCTATGGTTTTGTTCAGTTTGGTTCGAGGGCTTCAGCTGAAGAAGCCATTCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAATTCCAGCCACCAATCAGGACATGGCTACGTGGGGTCAGCAAGTTATACCGAGTGTTTACTATAGTGGCTATGGAGGAGCTTATGATGCTTATGGTTATGGGGCTGTACAAGATCCATCTTTATATGCATATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGACGGTGTACAAGATTTGACCGCCGTAGCCGGTGCTGTCCCTGCGGTGGAACAGGGGGAGGAATGGAATGATACGCTGGGCACACCAGATGTTGAGTATTTGAATAATGCATACCTCTCGAAACACGAAAGCGGCATTCTAGGGTGGCCGTTATGGTTGACTACCTCATCACTGGTTAGGCAAACATGAGCTTGATGCTTCTTGTGTCCGTGGTCTGTAGTAATAGGGTTGTCACTGTGCAAAGGGCAGCTGGAGGAAAAATATGGTATGTGCTTATATACGCTTGACCATACTCGGGGTAGATGATATCGACATTATACTGTTGCCGTGTGCTTTAAAAGATCAGTGCGCTTAATTTAATAATTCATTTTTCCTCTATACGAACGGGGTTGCGGGGTTAGGTGCTTTATCTATATATTTAATGATGCTCTCTGCTGTTTGGAAAGGTAGTTTTCGTATCAGGAGAACATCTGTGCTTTGATCTGTTTCCCATATTCATATAGTCAACTATAGTCAATGTCTTTCATTTGGGTTTGTCTGTGTTTTAACAGGTAGCTTTAGCTGATAAACTGTTTCGTCGGTTGCGATTTTGCAAAAAGAAAATGAAAGCTGAAATGAGATGACGTTTTTATTGGAAGGAGTGATGGTTGTTGCTAAATAAAACAAATTCTCAATATTCTAGAAATTTGGCTATTTTAACTTTTTTTCTTGTCTATCTAATTTGGAGAAAATCACTATCCTTCTACTCGTGTCAATGAGGGATCATTACTGATTTCAAGTCTTTTTTTAAACTTGGAAGATTAGGTAGAAAATAATTATAAATATGGTTACTTTTTTAAAAAAATTATTAATTAGGG

Coding sequence (CDS)

ATGGCGACTATGGCAGGCCAACCAGCGCACCATCAACCAACTACGCTCGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCCTACCTTAATTCTTGCTTTGCTCACTCCGGCGAGGTAGTATCAATTAAAATTATTCGCAATAAGATCACTGGGCAACCCGAGGGTTATGGATTTGTGGAGTTTGTTTCCCATGCGGCAGCAGAAAGAATTTTGCAGACTTACAATGGGGCACAGATGCCTGGGACTGAACAAACTTTCAGGTTGAATTGGGCCTCTTTTGGGACTGGAGAAAGGCGCCCTGATGCTGGCCCTGAGCATTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGATTATCTGCTGCAGGAGACCTTTAGAGCGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAATACTGGACGTTCAAAGGGCTATGGGTTTGTTAAATTTTCTGATGAAAACGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGTAGCAACGCCCAAAAAGACCACTGGTGTTCAGCAGCAATATAGTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACACCCGTGCCTGTGCTTCCAGCTCCAGCAGGTTATGATGCGGATAACACAACTATCTTTGTTGGCAACTTGGATCCTAATATTACCGAGGAGGAGCTGAAGCAAACGTTTTTGCAGTTTGGTGAGATTGTTTATGTGAATATTCCTGCTGTGAAAGGCTATGGTTTTGTTCAGTTTGGTTCGAGGGCTTCAGCTGAAGAAGCCATTCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAATTCCAGCCACCAATCAGGACATGGCTACGTGGGGTCAGCAAGTTATACCGAGTGTTTACTATAGTGGCTATGGAGGAGCTTATGATGCTTATGGTTATGGGGCTGTACAAGATCCATCTTTATATGCATATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGACGGTGTACAAGATTTGACCGCCGTAGCCGGTGCTGTCCCTGCGGTGGAACAGGGGGAGGAATGGAATGATACGCTGGGCACACCAGATGTTGAGTATTTGAATAATGCATACCTCTCGAAACACGAAAGCGGCATTCTAGGGTGGCCGTTATGGTTGACTACCTCATCACTGGTTAGGCAAACATGA

Protein sequence

MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLDPNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWGRIPATNQDMATWGQQVIPSVYYSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQQVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSLVRQT
Homology
BLAST of Sed0011306 vs. NCBI nr
Match: XP_008437079.1 (PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo])

HSP 1 Score: 784.6 bits (2025), Expect = 4.1e-223
Identity = 384/424 (90.57%), Postives = 397/424 (93.63%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MAT+AGQP HHQPTT+EEVRTLWIGDLQYWVDESYLNSCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQYSLGKAMYPVPAYTT VPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEI YV IPA KG GFVQFG+RASAEEAIQKMQGKIIGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQ 360
           WGR PA  QD+ATWGQQV P+ +  Y GYGG YDAYGYG VQDPSLYAYGAYSGYASYPQ
Sbjct: 301 WGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQ 360

Query: 361 QVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSL 420
           QVDGVQDL  VAGAVP+VEQGEEWNDTL TPDV+YLN+AYLSKHES ILGWPLWLTTSSL
Sbjct: 361 QVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTTSSL 420

Query: 421 VRQT 423
           VRQT
Sbjct: 421 VRQT 422

BLAST of Sed0011306 vs. NCBI nr
Match: XP_022958490.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 783.5 bits (2022), Expect = 9.2e-223
Identity = 383/425 (90.12%), Postives = 396/425 (93.18%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MA MAGQPAHHQPTT+EEVRTLWIGDLQYWVDESYLNSCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG+QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFR QYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQY+LGKAMYPVP+YTTPVPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEIVY  IPA KG GFVQFG+R SAEEAIQKMQGK+IGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIP---SVYYSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYP 360
           WGR PA  QD+ATWGQQV P   S YY GYGGAYDAYGYG VQDPSLYAYGAYSGY SYP
Sbjct: 301 WGRNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYP 360

Query: 361 QQVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSS 420
           QQVDGVQDL AVAGAVPAVEQ EEWNDTL TPDVE+LN AYLSKHES ILGWPLWLTTSS
Sbjct: 361 QQVDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSS 420

Query: 421 LVRQT 423
           LV+QT
Sbjct: 421 LVKQT 423

BLAST of Sed0011306 vs. NCBI nr
Match: XP_023533305.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 783.5 bits (2022), Expect = 9.2e-223
Identity = 384/425 (90.35%), Postives = 395/425 (92.94%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MA MAGQPAHHQPTT+EEVRTLWIGDLQYWVDESYLNSCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG+QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFR QYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQYSLGKAMYPVPAYTTPVPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEIVY  IPA KG GFVQFG+R SAEEAIQKMQGK+IGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIP---SVYYSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYP 360
           WGR PA  QD+ATWGQQV P   S YY GYGGAYDAYGYG VQDPSLYAYGAYSGY SYP
Sbjct: 301 WGRNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYP 360

Query: 361 QQVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSS 420
           Q VDGVQDL AVAGAVPAVEQ EEWNDTL TPDVE+LN AYLSKHES ILGWPLWLTTSS
Sbjct: 361 QPVDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSS 420

Query: 421 LVRQT 423
           LV+QT
Sbjct: 421 LVKQT 423

BLAST of Sed0011306 vs. NCBI nr
Match: KAG6606177.1 (Polyadenylate-binding protein RBP47B', partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 779.2 bits (2011), Expect = 1.7e-221
Identity = 381/425 (89.65%), Postives = 393/425 (92.47%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MA MAGQPAHHQPTT+EEVRTLWIGDLQYWVDESYLNSCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG+QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFR QYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQYSLGKAMYPVP+YTTPVPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPSYTTPVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEIVY  IPA KG GFVQFG+R SAEEAIQKMQGK+IGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIP---SVYYSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYP 360
           WGR PA  QD+ATWGQQV P   S YY GYGGAYDAYGYG  QDPSLYAYGAYSGY SYP
Sbjct: 301 WGRNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVAQDPSLYAYGAYSGYTSYP 360

Query: 361 QQVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSS 420
           Q  DGVQDL AVAGAVPAVEQ EEWNDTL TPDVE+LN AYLSKHES ILGWPLWLTTSS
Sbjct: 361 QPADGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSS 420

Query: 421 LVRQT 423
           LV+QT
Sbjct: 421 LVKQT 423

BLAST of Sed0011306 vs. NCBI nr
Match: XP_022969897.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022969898.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 778.9 bits (2010), Expect = 2.3e-221
Identity = 382/424 (90.09%), Postives = 397/424 (93.63%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MAT+A QP HHQPT++EEVRTLWIGDLQYWVDESYL+SCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQY+ GKAMYPVPAYTTPVPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEI YV IPA +G GFVQFG+RASAEEAIQKMQGKIIGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQ 360
           WGR PA  QD+ATWGQQV P+ +  Y GYGGAYDAYGYG VQDPSLYAYGAYSGYASYPQ
Sbjct: 301 WGRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQ 360

Query: 361 QVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSL 420
           QVDGVQDL AVAGAVPAVEQGEEWNDTL TPDVE LN+AYLSKHES ILGWPLWLTTSSL
Sbjct: 361 QVDGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSL 420

Query: 421 VRQT 423
           VRQT
Sbjct: 421 VRQT 422

BLAST of Sed0011306 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 5.9e-156
Identity = 284/421 (67.46%), Postives = 326/421 (77.43%), Query Frame = 0

Query: 7   QPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P TLEEVRTLWIGDLQYWVDE+YL SCF+ +GE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNG QMPGTE TFRLNWASFG+G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKF++E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISVATPKKTTGVQQQYSLGKAMYPV---PAYTTPVPVLPAPAGYDADNTTIFVGNLDPNI 246
           IS ATPKK  GVQQQY + KA+YPV    A   PV    AP   D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE++YV IPA KGYG+VQF +R SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 IPATNQDMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQQVD 366
            P   QD   W  Q  P+ +  Y GYG  YDAY YGA QDPS+YAYG Y GY  YPQQ +
Sbjct: 311 NP--GQD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGE 370

Query: 367 GVQDLT-AVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSLVR 422
           G QD++ + AG V   EQ  E  D L TPDV+ LN AYLS H S ILG P+W  TSSL  
Sbjct: 371 GTQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTS 422

BLAST of Sed0011306 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-107
Identity = 208/343 (60.64%), Postives = 245/343 (71.43%), Query Frame = 0

Query: 18  EVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAERI 77
           EVR+LWIGDLQYW+DE+YL++CF H+GE+VS K+IRNK TGQ EGYGF+EF SHAAAE I
Sbjct: 82  EVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETI 141

Query: 78  LQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQY 137
           LQTYNG  MP  EQ FR+NWAS G GERR D+  EH+IFVGDLA DVTDY+LQETF++ Y
Sbjct: 142 LQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGDLAADVTDYILQETFKSVY 201

Query: 138 PSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTRPMRISVATPKKTTG 197
            SVRGAKVVTD  TGRSKGYGFVKF+DE+E+ RAM+EMNGV CSTRPMRI  A  KK  G
Sbjct: 202 SSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVG 261

Query: 198 VQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLDPNITEEELKQTFLQFGE 257
             Q     KA Y  P  T            D +NTTIFVG LDP + EE L+Q F  +GE
Sbjct: 262 TPQ-----KATYQNPQAT--------QGESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGE 321

Query: 258 IVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWGRIPATNQ-DMATWGQ 317
           +V+V I A K  GFVQFG+RASAE+A+  + G  +G Q +R SWGR P++ Q D   WG 
Sbjct: 322 LVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQTDQTQWGG 381

Query: 318 QVIPSVYYSGYGGAYDAYGYG-AVQDPSLYAYGAYSGYASYPQ 359
                 YY GYG  Y+AYGY    QDP++Y YG Y GYA+Y Q
Sbjct: 382 S--GGAYY-GYGQGYEAYGYAPPAQDPNMY-YGNYPGYANYQQ 406

BLAST of Sed0011306 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.3e-106
Identity = 203/357 (56.86%), Postives = 251/357 (70.31%), Query Frame = 0

Query: 7   QPAHHQPTTL----EEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEG 66
           Q     PT +    E+ +T+WIGDLQ W+DESYL+SCF+ +GEV+S+KIIRNK TGQ E 
Sbjct: 67  QKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSER 126

Query: 67  YGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAP 126
           YGFVEF +HAAAE++LQ+YNG  MP TEQ FRLNWA F TGE+R + G + SIFVGDLA 
Sbjct: 127 YGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLAS 186

Query: 127 DVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCST 186
           DVTD +L++TF ++YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAM+EMNGVYCS+
Sbjct: 187 DVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSS 246

Query: 187 RPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLDPN 246
           R MRI VATPKK +   +QYS    +      +       + +  D+ NTTIFVG LD  
Sbjct: 247 RAMRIGVATPKKPS-AHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSE 306

Query: 247 ITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWG 306
           +T+EEL+Q+F QFGE+V V IPA KG GFVQF  R+SA+EAIQK+ G IIG+Q VR SWG
Sbjct: 307 VTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWG 366

Query: 307 RIPATNQDMATWGQQVIPSVYYSGYGGA--YDAYGYGAV--QDPSLYAYGAYSGYAS 356
           R PA  Q     G Q     +  GY G   Y  YGYGA   QD  +YA GA  G +S
Sbjct: 367 RSPANKQMRTDSGSQ-----WNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASS 417

BLAST of Sed0011306 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 7.4e-106
Identity = 201/351 (57.26%), Postives = 244/351 (69.52%), Query Frame = 0

Query: 13  PTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYGFVEFVSHA 72
           P   +EV+TLWIGDLQ W+DESY+ +CFA +GEV S+K+IR+K +GQ +GYGFVEF S A
Sbjct: 83  PAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRA 142

Query: 73  AAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAPDVTDYLLQET 132
           AA+RILQTYNG  MP  E  FRLNWAS   GE+R D  P+++IFVGDLA DVTDYLLQET
Sbjct: 143 AADRILQTYNGQMMPNVEMVFRLNWAS--AGEKRDDT-PDYTIFVGDLAADVTDYLLQET 202

Query: 133 FRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTRPMRISVATP 192
           FR  YPSV+GAKVVTD  T RSKGYGFVKF D  E+ RAM+EMNG+ CS+RPMRI  A  
Sbjct: 203 FRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAAN 262

Query: 193 KKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLDPNITEEELKQTF 252
           KKTTGVQ++    +                A +  D +NTTIFVG LDPN+TE+ LKQ F
Sbjct: 263 KKTTGVQERVPNAQG---------------AQSENDPNNTTIFVGGLDPNVTEDVLKQVF 322

Query: 253 LQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWGRIPATNQ--- 312
             +GE+V+V IP  K  GFVQ+ +R SAE+A+  +QG +IG Q VR SWGR  +  Q   
Sbjct: 323 APYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQH 382

Query: 313 DMATWGQQVIPSVYYSGYGGAYDAY-GYGAVQDPSLYAYGAYSGYASYPQQ 360
           D   WG       YY GYG  Y+AY GY   QDP++Y YGAY+GY +Y QQ
Sbjct: 383 DSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQ 415

BLAST of Sed0011306 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.4e-101
Identity = 196/350 (56.00%), Postives = 241/350 (68.86%), Query Frame = 0

Query: 5   AGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAH+GE+VS K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGAQMPG-TEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N A +P   +Q FRLNWAS  +G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+FSDE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISVATPKK-TTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLDPN 244
           PMRI  A  KK  TG +  Y    A       TT           D +NTT+FVG LD +
Sbjct: 227 PMRIGPAASKKGVTGQRDSYQSSAA-----GVTT---------DNDPNNTTVFVGGLDAS 286

Query: 245 ITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWG 304
           +T++ LK  F Q+GEIV+V IPA K  GFVQF  ++ AEEA++ + G  +G   VR SWG
Sbjct: 287 VTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWG 346

Query: 305 RIPATNQDMATWGQQVIPSVYYSGYGGAYDAYGYGAVQDPSLYAYGAYSG 353
           R P+  Q     G       YY GYG   + YGY   QDP+ Y YG YSG
Sbjct: 347 RSPSNKQS----GDP--SQFYYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

BLAST of Sed0011306 vs. ExPASy TrEMBL
Match: A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 784.6 bits (2025), Expect = 2.0e-223
Identity = 384/424 (90.57%), Postives = 397/424 (93.63%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MAT+AGQP HHQPTT+EEVRTLWIGDLQYWVDESYLNSCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQYSLGKAMYPVPAYTT VPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEI YV IPA KG GFVQFG+RASAEEAIQKMQGKIIGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQ 360
           WGR PA  QD+ATWGQQV P+ +  Y GYGG YDAYGYG VQDPSLYAYGAYSGYASYPQ
Sbjct: 301 WGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQ 360

Query: 361 QVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSL 420
           QVDGVQDL  VAGAVP+VEQGEEWNDTL TPDV+YLN+AYLSKHES ILGWPLWLTTSSL
Sbjct: 361 QVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTTSSL 420

Query: 421 VRQT 423
           VRQT
Sbjct: 421 VRQT 422

BLAST of Sed0011306 vs. ExPASy TrEMBL
Match: A0A6J1H3K6 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459701 PE=4 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 4.5e-223
Identity = 383/425 (90.12%), Postives = 396/425 (93.18%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MA MAGQPAHHQPTT+EEVRTLWIGDLQYWVDESYLNSCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG+QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFR QYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQY+LGKAMYPVP+YTTPVPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEIVY  IPA KG GFVQFG+R SAEEAIQKMQGK+IGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIP---SVYYSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYP 360
           WGR PA  QD+ATWGQQV P   S YY GYGGAYDAYGYG VQDPSLYAYGAYSGY SYP
Sbjct: 301 WGRNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYP 360

Query: 361 QQVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSS 420
           QQVDGVQDL AVAGAVPAVEQ EEWNDTL TPDVE+LN AYLSKHES ILGWPLWLTTSS
Sbjct: 361 QQVDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSS 420

Query: 421 LVRQT 423
           LV+QT
Sbjct: 421 LVKQT 423

BLAST of Sed0011306 vs. ExPASy TrEMBL
Match: A0A6J1HXL5 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 1.1e-221
Identity = 382/424 (90.09%), Postives = 397/424 (93.63%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MAT+A QP HHQPT++EEVRTLWIGDLQYWVDESYL+SCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQY+ GKAMYPVPAYTTPVPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEI YV IPA +G GFVQFG+RASAEEAIQKMQGKIIGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQ 360
           WGR PA  QD+ATWGQQV P+ +  Y GYGGAYDAYGYG VQDPSLYAYGAYSGYASYPQ
Sbjct: 301 WGRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQ 360

Query: 361 QVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSL 420
           QVDGVQDL AVAGAVPAVEQGEEWNDTL TPDVE LN+AYLSKHES ILGWPLWLTTSSL
Sbjct: 361 QVDGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSL 420

Query: 421 VRQT 423
           VRQT
Sbjct: 421 VRQT 422

BLAST of Sed0011306 vs. ExPASy TrEMBL
Match: A0A1S3ASS8 (polyadenylate-binding protein RBP47B' isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 1.4e-221
Identity = 384/429 (89.51%), Postives = 397/429 (92.54%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MAT+AGQP HHQPTT+EEVRTLWIGDLQYWVDESYLNSCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQYSLGKAMYPVPAYTT VPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEI YV IPA KG GFVQFG+RASAEEAIQKMQGKIIGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTS 300

Query: 301 WGRIPATNQ-----DMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGY 360
           WGR PA  Q     D+ATWGQQV P+ +  Y GYGG YDAYGYG VQDPSLYAYGAYSGY
Sbjct: 301 WGRNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGY 360

Query: 361 ASYPQQVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWL 420
           ASYPQQVDGVQDL  VAGAVP+VEQGEEWNDTL TPDV+YLN+AYLSKHES ILGWPLWL
Sbjct: 361 ASYPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWL 420

Query: 421 TTSSLVRQT 423
           TTSSLVRQT
Sbjct: 421 TTSSLVRQT 427

BLAST of Sed0011306 vs. ExPASy TrEMBL
Match: A0A6J1E2I3 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430253 PE=4 SV=1)

HSP 1 Score: 777.7 bits (2007), Expect = 2.5e-221
Identity = 381/424 (89.86%), Postives = 397/424 (93.63%), Query Frame = 0

Query: 1   MATMAGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQP 60
           MAT+A QP HHQPT++EEVRTLWIGDLQYWVDESYL+SCFAH+GEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG QMPGTEQTFRLNWASFG GERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKF+DENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLD 240
           STRPMRIS ATPKKT GVQQQY+ GKAMYPVPAYTTPVPVL  PA YDA+NTTIFVGNLD
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVL--PADYDANNTTIFVGNLD 240

Query: 241 PNITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTS 300
           PNITEEELKQTFLQFGEI YV IPA +G GFVQFG+RASAEEAIQKMQGKIIGQQVVRTS
Sbjct: 241 PNITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTS 300

Query: 301 WGRIPATNQDMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQ 360
           WGR PA  QD+ATWGQQV P+ +  Y GYGGAYDAYGYG VQDPSLYAYGAYSGYASYPQ
Sbjct: 301 WGRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQ 360

Query: 361 QVDGVQDLTAVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSL 420
           QVDGVQDL AVAGAVPA+EQGEEWNDTL TPDVE LN+AYLSKHES ILGWPLWLTTSSL
Sbjct: 361 QVDGVQDLAAVAGAVPALEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSL 420

Query: 421 VRQT 423
           VRQT
Sbjct: 421 VRQT 422

BLAST of Sed0011306 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 552.0 bits (1421), Expect = 4.2e-157
Identity = 284/421 (67.46%), Postives = 326/421 (77.43%), Query Frame = 0

Query: 7   QPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P TLEEVRTLWIGDLQYWVDE+YL SCF+ +GE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNG QMPGTE TFRLNWASFG+G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKF++E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISVATPKKTTGVQQQYSLGKAMYPV---PAYTTPVPVLPAPAGYDADNTTIFVGNLDPNI 246
           IS ATPKK  GVQQQY + KA+YPV    A   PV    AP   D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE++YV IPA KGYG+VQF +R SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 IPATNQDMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQQVD 366
            P   QD   W  Q  P+ +  Y GYG  YDAY YGA QDPS+YAYG Y GY  YPQQ +
Sbjct: 311 NP--GQD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGE 370

Query: 367 GVQDLT-AVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSLVR 422
           G QD++ + AG V   EQ  E  D L TPDV+ LN AYLS H S ILG P+W  TSSL  
Sbjct: 371 GTQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTS 422

BLAST of Sed0011306 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 545.8 bits (1405), Expect = 3.0e-155
Identity = 281/418 (67.22%), Postives = 322/418 (77.03%), Query Frame = 0

Query: 7   QPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P TLEEVRTLWIGDLQYWVDE+YL SCF+ +GE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNG QMPGTE TFRLNWASFG+G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKF++E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLDPNITEE 246
           IS ATPKK  GVQQQY + K   P  A   PV    AP   D   TTI V NLD N+TEE
Sbjct: 191 ISAATPKKNVGVQQQY-VTKVTVP-SAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEE 250

Query: 247 ELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWGRIPA 306
           ELK+ F Q GE++YV IPA KGYG+VQF +R SAEEA+Q+MQG++IGQQ VR SW + P 
Sbjct: 251 ELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNP- 310

Query: 307 TNQDMATWGQQVIPSVY--YSGYGGAYDAYGYGAVQDPSLYAYGAYSGYASYPQQVDGVQ 366
             QD   W  Q  P+ +  Y GYG  YDAY YGA QDPS+YAYG Y GY  YPQQ +G Q
Sbjct: 311 -GQD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGEGTQ 370

Query: 367 DLT-AVAGAVPAVEQGEEWNDTLGTPDVEYLNNAYLSKHESGILGWPLWLTTSSLVRQ 422
           D++ + AG V   EQ  E  D L TPDV+ LN AYLS H S ILG P+W  TSSL  Q
Sbjct: 371 DISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQ 418

BLAST of Sed0011306 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 370.5 bits (950), Expect = 1.7e-102
Identity = 196/350 (56.00%), Postives = 241/350 (68.86%), Query Frame = 0

Query: 5   AGQPAHHQPTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAH+GE+VS K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGAQMPG-TEQTFRLNWASFGTGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N A +P   +Q FRLNWAS  +G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+FSDE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISVATPKK-TTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLDPN 244
           PMRI  A  KK  TG +  Y    A       TT           D +NTT+FVG LD +
Sbjct: 227 PMRIGPAASKKGVTGQRDSYQSSAA-----GVTT---------DNDPNNTTVFVGGLDAS 286

Query: 245 ITEEELKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWG 304
           +T++ LK  F Q+GEIV+V IPA K  GFVQF  ++ AEEA++ + G  +G   VR SWG
Sbjct: 287 VTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWG 346

Query: 305 RIPATNQDMATWGQQVIPSVYYSGYGGAYDAYGYGAVQDPSLYAYGAYSG 353
           R P+  Q     G       YY GYG   + YGY   QDP+ Y YG YSG
Sbjct: 347 RSPSNKQS----GDP--SQFYYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

BLAST of Sed0011306 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 363.6 bits (932), Expect = 2.1e-100
Identity = 194/352 (55.11%), Postives = 236/352 (67.05%), Query Frame = 0

Query: 13  PTTLEEVRTLWIGDLQYWVDESYLNSCFAHSGEVVSIKIIRNKITGQPEGYGFVEFVSHA 72
           P +  +V++LWIGDLQ W+DE+Y+ S FA SGE  S K+IRNK+TGQ EGYGF+EFVSH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 73  AAERILQTYNGAQMPGTEQTFRLNWASFGTGERR-PDAGPEHSIFVGDLAPDVTDYLLQE 132
            AER+LQTYNGA MP TEQTFRLNWA  G GE+R    GP+H+IFVGDLAP+VTDY+L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 133 TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTRPMRISVAT 192
           TF+  Y SV+GAKVV D  TGRSKGYGFV+F+DENE+ RAM+EMNG YCSTRPMRI  A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 193 PKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAG-YDADNTTIFVGNLDPNITEEELKQ 252
            K    +Q       AMY             A AG  D +NTTIFVG LD N+T++ELK 
Sbjct: 233 NKNALPMQ------PAMYQ--------NTQGANAGDNDPNNTTIFVGGLDANVTDDELKS 292

Query: 253 TFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWGRIPATNQD 312
            F QFGE+++V IP  K  GFVQ+ ++ASAE A+  + G  +G Q +R SWGR P    D
Sbjct: 293 IFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSD 352

Query: 313 MATWGQQVIPSVYYSGYGGAYDAYGYGA---VQDPSLYAYGAYSGYASYPQQ 360
            A W        YY         YGY A    QDP+ Y YG Y+GY +Y QQ
Sbjct: 353 QAQWN----GGGYYGYPPQPQGGYGYAAQPPTQDPNAY-YGGYTGYGNYQQQ 385

BLAST of Sed0011306 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 361.7 bits (927), Expect = 8.1e-100
Identity = 198/355 (55.77%), Postives = 241/355 (67.89%), Query Frame = 0

Query: 11  HQPTTLEEVRTLWIGDLQYWVDESYLNSCF--AHSGEVVSIKIIRNKITGQPEGYGFVEF 70
           HQ     E +T+W+GDLQ W+DE+YLNS F  A   E+VS+K+IRNK  G  EGYGFVEF
Sbjct: 94  HQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEF 153

Query: 71  VSHAAAERILQTYNGAQMPGTEQTFRLNWASFGTGERR-PDAGPEHSIFVGDLAPDVTDY 130
            SH  A+++LQ +NGA MP T+Q FRLNWASF TGE+R  + GP+ SIFVGDLAPDV+D 
Sbjct: 154 ESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213

Query: 131 LLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMSEMNGVYCSTRPMRI 190
           LL ETF  +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AM+EMNGV CS+R MRI
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273

Query: 191 SVATPKKTTGVQQQYSLGKAMYPVPAYTTPVPVLPAPAGYDADNTTIFVGNLDPNITEEE 250
             ATP+KT G QQQ        P  A+T         +  D  NTTIFVG LD ++T+E+
Sbjct: 274 GPATPRKTNGYQQQ----GGYMPSGAFTR--------SEGDTINTTIFVGGLDSSVTDED 333

Query: 251 LKQTFLQFGEIVYVNIPAVKGYGFVQFGSRASAEEAIQKMQGKIIGQQVVRTSWGRIPAT 310
           LKQ F +FGEIV V IP  KG GFVQF +R +AEEA++K+ G +IG+Q VR SWGR PA 
Sbjct: 334 LKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPAN 393

Query: 311 NQDMATWGQQVIPSVYYSGYGGAYDAYGYGAVQ-DPSLY-AYGAYSGYASYPQQV 361
            Q    +G Q +   YY G    Y+ YGY   Q DP +Y A   Y  Y  + QQV
Sbjct: 394 KQPRDKYGNQWV-DPYYGGQ--FYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQQV 433

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008437079.14.1e-22390.57PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo][more]
XP_022958490.19.2e-22390.12polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata][more]
XP_023533305.19.2e-22390.35polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pep... [more]
KAG6606177.11.7e-22189.65Polyadenylate-binding protein RBP47B', partial [Cucurbita argyrosperma subsp. so... [more]
XP_022969897.12.3e-22190.09polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022... [more]
Match NameE-valueIdentityDescription
Q8VXZ95.9e-15667.46Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'... [more]
Q9LEB41.3e-10760.64Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4... [more]
Q9LEB33.3e-10656.86Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4... [more]
Q0J9Y27.4e-10657.26RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=... [more]
Q9SAB32.4e-10156.00Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P... [more]
Match NameE-valueIdentityDescription
A0A1S3ATQ62.0e-22390.57polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1H3K64.5e-22390.12polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3... [more]
A0A6J1HXL51.1e-22190.09polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366... [more]
A0A1S3ASS81.4e-22189.51polyadenylate-binding protein RBP47B' isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1E2I32.5e-22189.86polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3... [more]
Match NameE-valueIdentityDescription
AT5G19350.14.2e-15767.46RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G19350.23.0e-15567.22RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G11650.21.7e-10256.00RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G54900.12.1e-10055.11RNA-binding protein 45A [more]
AT1G47500.18.1e-10055.77RNA-binding protein 47C' [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 21..96
e-value: 4.0E-14
score: 62.9
coord: 233..300
e-value: 2.2E-22
score: 90.4
coord: 114..188
e-value: 3.9E-21
score: 86.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 22..90
e-value: 3.3E-14
score: 52.5
coord: 234..297
e-value: 2.8E-19
score: 68.7
coord: 115..180
e-value: 3.5E-16
score: 58.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 113..192
score: 17.642843
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 232..304
score: 17.387012
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 20..100
score: 15.238032
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 225..310
e-value: 5.3E-24
score: 86.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 101..209
e-value: 2.0E-23
score: 84.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 19..99
e-value: 3.9E-24
score: 86.6
NoneNo IPR availablePANTHERPTHR47640TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATEDcoord: 10..359
NoneNo IPR availablePANTHERPTHR47640:SF6POLYADENYLATE-BINDING PROTEIN RBP45A-RELATEDcoord: 10..359
NoneNo IPR availableCDDcd12344RRM1_SECp43_likecoord: 21..101
e-value: 1.81388E-48
score: 156.654
NoneNo IPR availableCDDcd12345RRM2_SECp43_likecoord: 112..191
e-value: 3.07889E-53
score: 168.611
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 217..329
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 104..205
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 8..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0011306.1Sed0011306.1mRNA
Sed0011306.2Sed0011306.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding