Sed0011273 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGGTTTAGCCGTTTTTTTGTGTGTCTTTTCTTCATCCCTACTCGCAAGAAGAGTAGAATTATACGCGAGGGAACGATCTGAGTTTAGGGACGGCGGAAAGAGATCCGATGAACGGAGCGGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTAGTGATCGGAGCTCTGGCCTTCGGGTACCTAAATCTACAGCTCGTACTCAAACCCTACCTCGAGAAAGCTCAAACCTCTCTTCAAATTCCGGATTCGGATCCCTCCACAGTTCACAAAGACGACATTTCAAAGCTTGAGGATTAAGCTCCATCTTCGTCCATTTTGCCTCGGTATGTCTCAATTTAGCTTAGCGATAGATTAGGTTGGAATTTCTTAGGGTTCAAAGAGATATCGGAAGACGAAAGTTGGATCTAATGCTCTATTTGTTGAAGAATATAATAGATGCGAATAAACGATTGACATTTTTTGCTCTCTTTGATTAATGGGGAATCCTTTCAGTTTTTGTGGTATTGGCTGGCTCGCTGCTTAAATCTGAATTCTGAAAATTGCTATTCTCGGATTTTGCTCTTTCTTTTTGGTTGTTTGGTGTTGCTTAAGTTGTAAATGTCACTGATATGTCCCCGAACGAGTGGTGCGGTGCTTGAACGCCTGCGCTTTCAAGGTGTGCTTCCCTCAAGTTTCGAGTGTCAAAAATTACTCGTGACATTAATTTGTAGACACTTCCAGTGTCTTCATTCTTTGATGTCTCTCGGTGTATGGCTTAAGAACGAGAGTGCTTAGCCCGGG TTCGGTTTAGCCGTTTTTTTGTGTGTCTTTTCTTCATCCCTACTCGCAAGAAGAGTAGAATTATACGCGAGGGAACGATCTGAGTTTAGGGACGGCGGAAAGAGATCCGATGAACGGAGCGGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTAGTGATCGGAGCTCTGGCCTTCGGGTACCTAAATCTACAGCTCGTACTCAAACCCTACCTCGAGAAAGCTCAAACCTCTCTTCAAATTCCGGATTCGGATCCCTCCACAGTTCACAAAGACGACATTTCAAAGCTTGAGGATTAAGCTCCATCTTCGTCCATTTTGCCTCGGTATGTCTCAATTTAGCTTAGCGATAGATTAGGTTGGAATTTCTTAGGGTTCAAAGAGATATCGGAAGACGAAAGTTGGATCTAATGCTCTATTTGTTGAAGAATATAATAGATGCGAATAAACGATTGACATTTTTTGCTCTCTTTGATTAATGGGGAATCCTTTCAGTTTTTGTGGTATTGGCTGGCTCGCTGCTTAAATCTGAATTCTGAAAATTGCTATTCTCGGATTTTGCTCTTTCTTTTTGGTTGTTTGGTGTTGCTTAAGTTGTAAATGTCACTGATATGTCCCCGAACGAGTGGTGCGGTGCTTGAACGCCTGCGCTTTCAAGGTGTGCTTCCCTCAAGTTTCGAGTGTCAAAAATTACTCGTGACATTAATTTGTAGACACTTCCAGTGTCTTCATTCTTTGATGTCTCTCGGTGTATGGCTTAAGAACGAGAGTGCTTAGCCCGGG ATGAACGGAGCGGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTAGTGATCGGAGCTCTGGCCTTCGGGTACCTAAATCTACAGCTCGTACTCAAACCCTACCTCGAGAAAGCTCAAACCTCTCTTCAAATTCCGGATTCGGATCCCTCCACAGTTCACAAAGACGACATTTCAAAGCTTGAGGATTAA MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLED Homology
BLAST of Sed0011273 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 90.1 bits (222), Expect = 7.2e-15 Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of Sed0011273 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.0 bits (214), Expect = 6.1e-14 Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of Sed0011273 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus]) HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Sed0011273 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 1.4e-10 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Sed0011273 vs. NCBI nr
Match: KAG4960153.1 (hypothetical protein JHK87_036786 [Glycine soja] >KAG4971168.1 hypothetical protein JHK85_037589 [Glycine max] >KAG4977568.1 hypothetical protein JHK86_037042 [Glycine max] >KAG5113566.1 hypothetical protein JHK82_036835 [Glycine max] >KAG5130845.1 hypothetical protein JHK84_037242 [Glycine max]) HSP 1 Score: 63.5 bits (153), Expect = 7.2e-07 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Sed0011273 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Sed0011273 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.8e-11 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Sed0011273 vs. ExPASy TrEMBL
Match: A0A0R0GRJ1 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G207400 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-07 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Sed0011273 vs. ExPASy TrEMBL
Match: A0A371EJR3 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_55019 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-07 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of Sed0011273 vs. ExPASy TrEMBL
Match: A0A445I812 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_031311 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-07 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Sed0011273 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 2.9e-06 Identity = 22/32 (68.75%), Postives = 29/32 (90.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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