Sed0011251 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAAGAGAGAGAAACACAAAGAAGAAGAAGAAGAAGAAGGGATTCTAGAGAGAGAAACAGAGACTAATCAATGGATGATGCAATGGCAAGGAAGAAGACGAAGAAGAAGAAGAGAATTACATTCGGTTTCCAGAAGCTAAGAGAGTCGTGGAAGTGGAAATTCCTCAGAGATTTCAAGTGGAAGAGATTGAATCTTCAGATCGGTTTCTTCGATGCGATCATCTTCCGAATCGTCTCTCTGTTCGAGGCCGTTGCGTTGGTCGGCATCGCCGGATTCTTCTTCCTCTGCTGTGGCGGCTGCCGCTTCTGATCGATTTGTATGTTCTTCGAAACTTCGTAATTAACCGATTTCTCTGTATGTAATTTTCATTTAAGTTTTCTTCCTCTTCTGTTTTGTTTTCTTAATTCGTTCGTTGATTGTTTCTGCCAAAGCTGTGAAAGCAAAATGTGAATTCCAATTTCTTTGATCCATTTGTCTCTCTTGTGGCTGCTGCCGCTTCTGATTGAATCTGCGAACTGAATCGATCGGTTCGTGTGTTCTTCGAAACTTCGTAATTA TAGAAGAGAGAGAAACACAAAGAAGAAGAAGAAGAAGAAGGGATTCTAGAGAGAGAAACAGAGACTAATCAATGGATGATGCAATGGCAAGGAAGAAGACGAAGAAGAAGAAGAGAATTACATTCGGTTTCCAGAAGCTAAGAGAGTCGTGGAAGTGGAAATTCCTCAGAGATTTCAAGTGGAAGAGATTGAATCTTCAGATCGGTTTCTTCGATGCGATCATCTTCCGAATCGTCTCTCTGTTCGAGGCCGTTGCGTTGGTCGGCATCGCCGGATTCTTCTTCCTCTGCTGTGGCGGCTGCCGCTTCTGATCGATTTGTATGTTCTTCGAAACTTCGTAATTAACCGATTTCTCTGTATGTAATTTTCATTTAAGTTTTCTTCCTCTTCTGTTTTGTTTTCTTAATTCGTTCGTTGATTGTTTCTGCCAAAGCTGTGAAAGCAAAATGTGAATTCCAATTTCTTTGATCCATTTGTCTCTCTTGTGGCTGCTGCCGCTTCTGATTGAATCTGCGAACTGAATCGATCGGTTCGTGTGTTCTTCGAAACTTCGTAATTA ATGGATGATGCAATGGCAAGGAAGAAGACGAAGAAGAAGAAGAGAATTACATTCGGTTTCCAGAAGCTAAGAGAGTCGTGGAAGTGGAAATTCCTCAGAGATTTCAAGTGGAAGAGATTGAATCTTCAGATCGGTTTCTTCGATGCGATCATCTTCCGAATCGTCTCTCTGTTCGAGGCCGTTGCGTTGGTCGGCATCGCCGGATTCTTCTTCCTCTGCTGTGGCGGCTGCCGCTTCTGA MDDAMARKKTKKKKRITFGFQKLRESWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAVALVGIAGFFFLCCGGCRF Homology
BLAST of Sed0011251 vs. NCBI nr
Match: KGN49382.1 (hypothetical protein Csa_004198 [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 0
BLAST of Sed0011251 vs. NCBI nr
Match: KAG7034699.1 (hypothetical protein SDJN02_04429, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 127.5 bits (319), Expect = 5.2e-26 Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Sed0011251 vs. NCBI nr
Match: KAG6581417.1 (hypothetical protein SDJN03_21419, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19 Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of Sed0011251 vs. NCBI nr
Match: ESR62900.1 (hypothetical protein CICLE_v10017350mg [Citrus clementina]) HSP 1 Score: 72.4 bits (176), Expect = 2.0e-09 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Sed0011251 vs. NCBI nr
Match: KDO78130.1 (hypothetical protein CISIN_1g036027mg [Citrus sinensis]) HSP 1 Score: 72.4 bits (176), Expect = 2.0e-09 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Sed0011251 vs. ExPASy TrEMBL
Match: A0A0A0KLX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522750 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 0
BLAST of Sed0011251 vs. ExPASy TrEMBL
Match: A0A067GHI9 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036027mg PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.5e-10 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Sed0011251 vs. ExPASy TrEMBL
Match: V4UFE9 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017350mg PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.5e-10 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Sed0011251 vs. ExPASy TrEMBL
Match: A0A7N2LSF8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Sed0011251 vs. ExPASy TrEMBL
Match: A0A061GEB5 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029517 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.8e-09 Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Sed0011251 vs. TAIR 10
Match: AT5G46295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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