Sed0011249 (gene) Chayote v1

Overview


Name	Sed0011249
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NDR1/HIN1-like protein
Location	LG05: 2408312 .. 2409319 (-)
RNA-Seq Expression	Sed0011249
Synteny	Sed0011249

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCTCATCTCTCACCCCTATATTAACCCCCAATTCCTTAGCCCAGTCCCCAACAAACAACCCCACACTCCACAAATCCAAATGTCTTTAGCGTCAGAGAAATCCCCAAAACACTGCGCGATCAAGCAAGCATCAAAGCTCGACAAACGCTGCAAGAAACTCTTCCTCGCAGCATCCGCATTGCTATCAACAATTTCACTTCTGATACTCATCCTGTGGCTCATCCTCCATCCATGGAACCCACAATTCACCCTCAAACAAGCCCAAATTTACCAACTCAACCTAATCGACCTCCACCTCCTCAACTCCACCATCCAATTCACCCTCGCCGCTAAAAACCCAAATCACAAATTCGGGATCTACTTCGACCCGGTCCGGGTCTACGCGGTCTACAAGGCCCAGCAGATTTCTGTGGACTCTTGGATTCCTGGGTTTTACCAGGGGAAAGAGGAGAGTAACTTCTTGACGGCGGTCTTGGCCGGCGGCGGCAGCGGCGGCGTTCCGGTGGCGCCGTCGTTTCGGTTCGAGGTCGGCCGGGACCAGCGGGCGGGCCGGTTCGTGATGAATGTGAAGGCTGTGGGCCGGTTGAGGTGGAAGTTTGGGGGTTGGGTTTCGGGTCGCTACCGGTTCGATGTGGATTGCGTGGCGGTTCTGCCGTTTGGGCCGACGATTCCGGCCGCGCCGCTTAGTTTGAAGCAACCGACTCGCTGCTCCATTTCGATTTGATTTTTCGTTATTTTAATCTTTATGTTATATTGTGGACTTTGGTTGCTTTGTATATTACAATGTTTTTAGCTACCATAGATCTTGAAATACATTTTCACAATATTTATTGTAATTGATGGGTTGTATGATTGAGTATGATCGTGTTAGTTAAGCTTGCTTGGATGTGAGTAGTAAGATGAAGCGGTTCACTTTTATTGAGTAGGATTTTGAGTTTATGGAACATTTAGATATTATAGGATCATGATATTAAAACAGGTGTGAGTGAAAAAAAAGTTAGATGG

mRNA sequence

TACCCTCATCTCTCACCCCTATATTAACCCCCAATTCCTTAGCCCAGTCCCCAACAAACAACCCCACACTCCACAAATCCAAATGTCTTTAGCGTCAGAGAAATCCCCAAAACACTGCGCGATCAAGCAAGCATCAAAGCTCGACAAACGCTGCAAGAAACTCTTCCTCGCAGCATCCGCATTGCTATCAACAATTTCACTTCTGATACTCATCCTGTGGCTCATCCTCCATCCATGGAACCCACAATTCACCCTCAAACAAGCCCAAATTTACCAACTCAACCTAATCGACCTCCACCTCCTCAACTCCACCATCCAATTCACCCTCGCCGCTAAAAACCCAAATCACAAATTCGGGATCTACTTCGACCCGGTCCGGGTCTACGCGGTCTACAAGGCCCAGCAGATTTCTGTGGACTCTTGGATTCCTGGGTTTTACCAGGGGAAAGAGGAGAGTAACTTCTTGACGGCGGTCTTGGCCGGCGGCGGCAGCGGCGGCGTTCCGGTGGCGCCGTCGTTTCGGTTCGAGGTCGGCCGGGACCAGCGGGCGGGCCGGTTCGTGATGAATGTGAAGGCTGTGGGCCGGTTGAGGTGGAAGTTTGGGGGTTGGGTTTCGGGTCGCTACCGGTTCGATGTGGATTGCGTGGCGGTTCTGCCGTTTGGGCCGACGATTCCGGCCGCGCCGCTTAGTTTGAAGCAACCGACTCGCTGCTCCATTTCGATTTGATTTTTCGTTATTTTAATCTTTATGTTATATTGTGGACTTTGGTTGCTTTGTATATTACAATGTTTTTAGCTACCATAGATCTTGAAATACATTTTCACAATATTTATTGTAATTGATGGGTTGTATGATTGAGTATGATCGTGTTAGTTAAGCTTGCTTGGATGTGAGTAGTAAGATGAAGCGGTTCACTTTTATTGAGTAGGATTTTGAGTTTATGGAACATTTAGATATTATAGGATCATGATATTAAAACAGGTGTGAGTGAAAAAAAAGTTAGATGG

Coding sequence (CDS)

ATGTCTTTAGCGTCAGAGAAATCCCCAAAACACTGCGCGATCAAGCAAGCATCAAAGCTCGACAAACGCTGCAAGAAACTCTTCCTCGCAGCATCCGCATTGCTATCAACAATTTCACTTCTGATACTCATCCTGTGGCTCATCCTCCATCCATGGAACCCACAATTCACCCTCAAACAAGCCCAAATTTACCAACTCAACCTAATCGACCTCCACCTCCTCAACTCCACCATCCAATTCACCCTCGCCGCTAAAAACCCAAATCACAAATTCGGGATCTACTTCGACCCGGTCCGGGTCTACGCGGTCTACAAGGCCCAGCAGATTTCTGTGGACTCTTGGATTCCTGGGTTTTACCAGGGGAAAGAGGAGAGTAACTTCTTGACGGCGGTCTTGGCCGGCGGCGGCAGCGGCGGCGTTCCGGTGGCGCCGTCGTTTCGGTTCGAGGTCGGCCGGGACCAGCGGGCGGGCCGGTTCGTGATGAATGTGAAGGCTGTGGGCCGGTTGAGGTGGAAGTTTGGGGGTTGGGTTTCGGGTCGCTACCGGTTCGATGTGGATTGCGTGGCGGTTCTGCCGTTTGGGCCGACGATTCCGGCCGCGCCGCTTAGTTTGAAGCAACCGACTCGCTGCTCCATTTCGATTTGA

Protein sequence

MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQAQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGRYRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI

Homology

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BLAST of Sed0011249 vs. NCBI nr
Match: KAG7035776.1 (NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.4 bits (786), Expect = 9.8e-80
Identity = 151/214 (70.56%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MS    KSPKHCAIKQ  KLDK  KKLFLAASA LSTISLLIL+LWLIL P  P+F L+Q
Sbjct: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  AQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQ 120
           A +YQLNLIDLHLLNS+IQ TL++KNPN K GI++D ++VYA YK QQI++ + +PGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGR 180
           G+EESN LTA LAG     VPVAPSF +EVGRDQ AGRFV+ +KA+GRLRWK G WVSGR
Sbjct: 121 GQEESNLLTAFLAG---SSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGR 180

Query: 181 YRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           YRF+VDCVAV+PFGPT+P APL+L QPTRCS ++
Sbjct: 181 YRFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of Sed0011249 vs. NCBI nr
Match: XP_023533460.1 (NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6605814.1 NDR1/HIN1-like protein 26, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79
Identity = 151/214 (70.56%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MS    KSPKHCA KQ  KLDKR KKLFLAASA LSTISLLIL+LWLIL P  P+F L+Q
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  AQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQ 120
           A +YQLNLIDLHLLNS+IQ TL++KNPN K GI++D ++VYA YK QQI++ + +PGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGR 180
           G+EESN LTA LAG     VPVAPSF +EVGRDQ AGRFV+ +KA+GRLRWK G WVSGR
Sbjct: 121 GQEESNLLTAFLAG---SSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGR 180

Query: 181 YRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           YRF+VDCVAV+PFGPT+P APL+L QPTRCS ++
Sbjct: 181 YRFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of Sed0011249 vs. NCBI nr
Match: XP_022996419.1 (NDR1/HIN1-like protein 26 [Cucurbita maxima])

HSP 1 Score: 306.2 bits (783), Expect = 2.2e-79
Identity = 151/214 (70.56%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MS    KSPKHCA KQ  KLDKR KKLFLAASA LSTISLLIL+LWLIL P  P+F L+Q
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  AQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQ 120
           A +YQLNLIDLHLLNS+IQ TL++KNPN K GI++D ++VYA YK QQI++ + +PGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNKKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGR 180
           G+EESN LTA LAG     VPVAPSF +EVGRDQ AGRFV+ +KA+GRLRWK G WVSGR
Sbjct: 121 GQEESNLLTAFLAG---SSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGR 180

Query: 181 YRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           YRF+VDCVAV+PFGPT+P APL+L QPTRCS ++
Sbjct: 181 YRFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of Sed0011249 vs. NCBI nr
Match: XP_022957698.1 (NDR1/HIN1-like protein 26 [Cucurbita moschata])

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78
Identity = 150/214 (70.09%), Postives = 176/214 (82.24%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MS    KSPKHCA KQ  KLDK  KKLFLAASA LSTISLLIL+LWLIL P  P+F L+Q
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFDLRQ 60

Query: 61  AQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQ 120
           A +YQLNLIDLHLLNS+IQ TL++KNPN K GI++D ++VYA YK QQI++ + +PGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGR 180
           G+EESN LTA LAG     VPVAPSF +EVGRDQ AGRFV+ +KA+GRLRWK G WVSGR
Sbjct: 121 GQEESNLLTAFLAG---SSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGR 180

Query: 181 YRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           YRF+VDCVAV+PFGPT+P APL+L QPTRCS ++
Sbjct: 181 YRFNVDCVAVMPFGPTLPTAPLTLTQPTRCSTTL 211

[Close]

BLAST of Sed0011249 vs. NCBI nr
Match: XP_038906799.1 (NDR1/HIN1-like protein 26 [Benincasa hispida])

HSP 1 Score: 293.5 bits (750), Expect = 1.5e-75
Identity = 144/214 (67.29%), Postives = 173/214 (80.84%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MSLA  KSPKHCA KQ  K+ KR KKLFL  SA LSTISLLIL+LWLILHP  P+F +KQ
Sbjct: 1   MSLAHVKSPKHCANKQELKVHKRYKKLFLGVSAFLSTISLLILLLWLILHPSKPEFRVKQ 60

Query: 61  AQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQ 120
           A +YQLNLIDLHLLNS+IQ TL++KNPNH+ GIY+D ++VYA YK QQI++ + +P FYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAAYKGQQITLPTSLPPFYQ 120

Query: 121 GKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGR 180
             ++SN LTA LAG     VPVAPSF +EVG+DQ AGRFV+N+KA+GRLRWK G WVSG 
Sbjct: 121 AYQDSNLLTAFLAG---SSVPVAPSFGYEVGKDQSAGRFVLNLKAMGRLRWKVGSWVSGG 180

Query: 181 YRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           YRF+VDCVAV+PFGPT+P  PL+L  PTRCS ++
Sbjct: 181 YRFNVDCVAVMPFGPTLPMPPLTLNHPTRCSTTL 211

[Close]

BLAST of Sed0011249 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.6e-51
Identity = 104/216 (48.15%), Postives = 142/216 (65.74%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MS  S  SPKHCA K    ++ R KKLF   S   S + L+I ++WLILHP  P+F+L +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  AQIYQLNLI--DLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGF 120
           A IY LNL     HLLNS++Q TL +KNPN K GIY+D + VYA Y+ QQI+ ++ +P F
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVS 180
           YQ  EE N LTA L G     +PVA SF +++ R++  G+ ++ +K  G+LRWK G WVS
Sbjct: 121 YQSHEEINLLTAFLQG---TELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVS 180

Query: 181 GRYRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           G YRF+V+C+A++ FG  +   PL+  Q TRCS +I
Sbjct: 181 GAYRFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]

BLAST of Sed0011249 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.5e-26
Identity = 58/154 (37.66%), Postives = 91/154 (59.09%), Query Frame = 0


Query: 38  ISLLILILWLILHPWNPQFTLKQAQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDP 97
           + + I ++W+IL P  P+F L+ A +Y  NL   +LL S  Q T+A++N N + GIY+D 
Sbjct: 32  VLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGIYYDR 91

Query: 98  VRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAG 157
           + VYA Y+ QQI++ + IP  YQG +E N  +  + G     VP+AP     +G +Q  G
Sbjct: 92  LHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYG---NSVPIAPFNAVALGDEQNRG 151

Query: 158 RFVMNVKAVGRLRWKFGGWVSGRYRFDVDCVAVL 192
              + ++A GR+RWK G  ++G+Y   V C A +
Sbjct: 152 FVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

[Close]

BLAST of Sed0011249 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.5e-26
Identity = 64/175 (36.57%), Postives = 104/175 (59.43%), Query Frame = 0


Query: 22  KRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQAQIYQLNLI--DLHLLNSTIQ 81
           K  +++F +   +L  I L IL++W IL P  P+F L+ A +Y  N+     +LL S  Q
Sbjct: 13  KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 72

Query: 82  FTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGG 141
            TL+++NPN+K GIY+D + VYA Y++QQI+  + IP  YQG ++ +  +  + G     
Sbjct: 73  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYG---TS 132

Query: 142 VPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGRYRFDVDCVAVLPFG 195
           VP+AP     +  D+  G  ++ ++A GR+RWK G +++G+Y   V C A + FG
Sbjct: 133 VPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFG 184

[Close]

BLAST of Sed0011249 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 47/183 (25.68%), Postives = 88/183 (48.09%), Query Frame = 0


Query: 34  LLSTISLLI----LILWLILHPWNPQFTLKQAQIYQLNLIDLHLLNSTIQFTLAAKNPNH 93
           +L TI++L+    LI+WLI  P   +F +  A++ +  L   + L   +      +NPN 
Sbjct: 51  ILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNR 110

Query: 94  KFGIYFDPVRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGGVPVAPSFRFE 153
           + G+Y+D + V   Y  Q+  + + I  FYQG + +  +   L   G   V +    R +
Sbjct: 111 RIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLV--GQQLVLLDGGERKD 170

Query: 154 VGRDQRAGRFVMNVKAVGRLRWKFGGWVSGRYRFDVDCVAVLPFGPTIPAAPLSLKQPTR 213
           +  D  +  + ++ K   ++R+KFG   S R++  + C   +P   T  +    + QPT+
Sbjct: 171 LNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPL--TSNSTSGFVFQPTK 229

[Close]

BLAST of Sed0011249 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.0e-08
Identity = 43/155 (27.74%), Postives = 70/155 (45.16%), Query Frame = 0


Query: 34  LLSTISLLILILWLILHPWNPQFTLKQAQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGI 93
           L+  +   I IL+L+  P  P +++ + Q+ +  L     L +    T+ AKNPN K GI
Sbjct: 76  LVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTITAKNPNEKIGI 135

Query: 94  YF-DPVRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGR 153
           Y+ D  ++   Y   Q+S  S +P FYQG E +  +   + G       +  +      +
Sbjct: 136 YYEDGSKITVWYMEHQLSNGS-LPKFYQGHENTTVIYVEMTGQTQNASGLRTTLE---EQ 195

Query: 154 DQRAGRFVMNVKAVGRLRWKFGGWVSGRYRFDVDC 188
            QR G   + ++    +R KFG       RF V C
Sbjct: 196 QQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRC 226

[Close]

BLAST of Sed0011249 vs. ExPASy TrEMBL
Match: A0A6J1K8N8 (NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111491649 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.1e-79
Identity = 151/214 (70.56%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MS    KSPKHCA KQ  KLDKR KKLFLAASA LSTISLLIL+LWLIL P  P+F L+Q
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  AQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQ 120
           A +YQLNLIDLHLLNS+IQ TL++KNPN K GI++D ++VYA YK QQI++ + +PGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNKKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGR 180
           G+EESN LTA LAG     VPVAPSF +EVGRDQ AGRFV+ +KA+GRLRWK G WVSGR
Sbjct: 121 GQEESNLLTAFLAG---SSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGR 180

Query: 181 YRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           YRF+VDCVAV+PFGPT+P APL+L QPTRCS ++
Sbjct: 181 YRFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of Sed0011249 vs. ExPASy TrEMBL
Match: A0A6J1H101 (NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111459163 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.3e-79
Identity = 150/214 (70.09%), Postives = 176/214 (82.24%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MS    KSPKHCA KQ  KLDK  KKLFLAASA LSTISLLIL+LWLIL P  P+F L+Q
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFDLRQ 60

Query: 61  AQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQ 120
           A +YQLNLIDLHLLNS+IQ TL++KNPN K GI++D ++VYA YK QQI++ + +PGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGR 180
           G+EESN LTA LAG     VPVAPSF +EVGRDQ AGRFV+ +KA+GRLRWK G WVSGR
Sbjct: 121 GQEESNLLTAFLAG---SSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGR 180

Query: 181 YRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           YRF+VDCVAV+PFGPT+P APL+L QPTRCS ++
Sbjct: 181 YRFNVDCVAVMPFGPTLPTAPLTLTQPTRCSTTL 211

[Close]

BLAST of Sed0011249 vs. ExPASy TrEMBL
Match: A0A1S3AUK3 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483002 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.1e-75
Identity = 146/215 (67.91%), Postives = 176/215 (81.86%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MSLA  KSPKHCA KQ  K+ KR KKLFL  SA+LSTISLLIL+LWLIL P  P+F +KQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAILSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  AQIYQLNLI-DLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFY 120
           A +YQLNLI DLHLLNS+IQ TL++KNPNH+ GIY+D ++VYAVYK QQI++ + +P FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSG 180
           QG +E+N LTA LAG     VPVAPSF +EVGRDQ AGRFV+N+KA+GRLRWK G WVSG
Sbjct: 121 QGYQEANLLTAFLAG---SRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSG 180

Query: 181 RYRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
            YRF+V+CVAV+PFGPT+P  PL+L QPTRCS ++
Sbjct: 181 GYRFNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]

BLAST of Sed0011249 vs. ExPASy TrEMBL
Match: A0A5D3C6B2 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00100 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.5e-75
Identity = 146/215 (67.91%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MSLA  KSPKHCA KQ  K+ KR KKLFL  SA LSTISLLIL+LWLIL P  P+F +KQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  AQIYQLNLI-DLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFY 120
           A +YQLNLI DLHLLNS+IQ TL++KNPNH+ GIY+D ++VYAVYK QQI++ + +P FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSG 180
           QG +E+N LTA LAG     VPVAPSF +EVGRDQ AGRFV+N+KA+GRLRWK G WVSG
Sbjct: 121 QGYQEANLLTAFLAG---SRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSG 180

Query: 181 RYRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
            YRF+V+CVAV+PFGPT+P  PL+L QPTRCS ++
Sbjct: 181 GYRFNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]

BLAST of Sed0011249 vs. ExPASy TrEMBL
Match: A0A0A0KN27 (NDR1/HIN1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G139020 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.8e-74
Identity = 145/215 (67.44%), Postives = 173/215 (80.47%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MSLA  KSPKHCA KQ  K+ KR KKLFL  SA LSTISLLIL+LWLIL P  P+F +KQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  AQIYQLNLI-DLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFY 120
           A +YQLNLI DLHLLNS+IQ TL++KNPNH+ GIY+D ++VYAVYK QQI++ + +P FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSG 180
           QG +E N LTA LAG     VPVAPSF +EVGRDQ AGRFV+N+KA+GRLRWK G WVSG
Sbjct: 121 QGYQEGNLLTAFLAG---SRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSG 180

Query: 181 RYRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
            YRF+V+CVAV+PFGPT+P  PL+L QP RCS ++
Sbjct: 181 GYRFNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 212

[Close]

BLAST of Sed0011249 vs. TAIR 10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-52
Identity = 104/216 (48.15%), Postives = 142/216 (65.74%), Query Frame = 0


Query: 1   MSLASEKSPKHCAIKQASKLDKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQ 60
           MS  S  SPKHCA K    ++ R KKLF   S   S + L+I ++WLILHP  P+F+L +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  AQIYQLNLI--DLHLLNSTIQFTLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGF 120
           A IY LNL     HLLNS++Q TL +KNPN K GIY+D + VYA Y+ QQI+ ++ +P F
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVS 180
           YQ  EE N LTA L G     +PVA SF +++ R++  G+ ++ +K  G+LRWK G WVS
Sbjct: 121 YQSHEEINLLTAFLQG---TELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVS 180

Query: 181 GRYRFDVDCVAVLPFGPTIPAAPLSLKQPTRCSISI 215
           G YRF+V+C+A++ FG  +   PL+  Q TRCS +I
Sbjct: 181 GAYRFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]

BLAST of Sed0011249 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 132.1 bits (331), Expect = 5.3e-31
Identity = 71/198 (35.86%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 21  DKRCKKLFLAASALLSTISLLILILWLILHPWNPQFTLKQAQIYQLNLIDLHLLNSTIQF 80
           +K  K++       L+ +  ++ ++W ILHP  P+F L+ A IY  N+   + L S +Q 
Sbjct: 14  EKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQPNYLTSNLQV 73

Query: 81  TLAAKNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGGV 140
           TL+++NPN K GI++D + +YA Y+ QQ+++ + +P  YQG  +    +  L G     V
Sbjct: 74  TLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYG---TTV 133

Query: 141 PVAPSFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGRYRFDVDCVAVLP----FGPT 200
           PVAP F   + +D  AG  ++N+K  G +RWK G WVSGRYR  V+C A +     F   
Sbjct: 134 PVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYITLAGHFSGD 193

Query: 201 IPAAPLSLKQPTRCSISI 215
            PA    L Q  RC++ +
Sbjct: 194 GPAVKYQLVQ--RCAVDV 206

[Close]

BLAST of Sed0011249 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 122.5 bits (306), Expect = 4.2e-28
Identity = 68/186 (36.56%), Postives = 109/186 (58.60%), Query Frame = 0


Query: 32  SALLSTISLLILILWLILHPWNPQFTLKQAQIYQLNLI--DLHLLNSTIQFTLAAKNPNH 91
           S +L  I ++IL++W IL P  P+F L+ A ++  N+     +LL S  QFTL+++NPN 
Sbjct: 25  SIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPPNLLTSNFQFTLSSRNPND 84

Query: 92  KFGIYFDPVRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGGVPVAPSFRFE 151
           K GIY+D + VYA Y++QQI++ S +   YQG +E N  +  +   G   VPVAP   F 
Sbjct: 85  KIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNVWSPFV---GGYSVPVAPYNAFY 144

Query: 152 VGRDQRAGRFVMNVKAVGRLRWKFGGWVSGRYRFDVDCVAVLPFGPTIPAAPLSLKQPTR 211
           + +D  +G  ++ +   GR+RWK G +++G+Y   V C A++ FG +     +     T 
Sbjct: 145 LDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALINFGSSAAGVIVGKYMLTE 204

Query: 212 -CSISI 215
            CS+S+
Sbjct: 205 TCSVSV 207

[Close]

BLAST of Sed0011249 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-28
Identity = 64/194 (32.99%), Postives = 105/194 (54.12%), Query Frame = 0


Query: 25  KKLFLAASALLSTISLLILILWLILHPWNPQFTLKQAQIYQLNLIDLHLLNSTIQFTLAA 84
           +++  A   L+  ++ ++ ++W ILHP  P+F L+   I   N+   + L+S +Q T+++
Sbjct: 22  RRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNVSQPNFLSSNLQVTVSS 81

Query: 85  KNPNHKFGIYFDPVRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGGVPVAP 144
           +NPN K GI++D + +Y  Y+ Q++++   +P  YQG  E    +  L G     VPVAP
Sbjct: 82  RNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVWSPFLIG---SAVPVAP 141

Query: 145 SFRFEVGRDQRAGRFVMNVKAVGRLRWKFGGWVSGRYRFDVDCVAVL----PFGPTIPAA 204
                +  D  AG  ++N+K  G +RWK G WVSG YR  V+C A +        T PA 
Sbjct: 142 YLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFITVTGKLTGTGPAI 201

Query: 205 PLSLKQPTRCSISI 215
              L Q  RC++ +
Sbjct: 202 KYQLVQ--RCAVDV 210

[Close]

BLAST of Sed0011249 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 118.6 bits (296), Expect = 6.0e-27
Identity = 58/154 (37.66%), Postives = 91/154 (59.09%), Query Frame = 0


Query: 38  ISLLILILWLILHPWNPQFTLKQAQIYQLNLIDLHLLNSTIQFTLAAKNPNHKFGIYFDP 97
           + + I ++W+IL P  P+F L+ A +Y  NL   +LL S  Q T+A++N N + GIY+D 
Sbjct: 32  VLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGIYYDR 91

Query: 98  VRVYAVYKAQQISVDSWIPGFYQGKEESNFLTAVLAGGGSGGVPVAPSFRFEVGRDQRAG 157
           + VYA Y+ QQI++ + IP  YQG +E N  +  + G     VP+AP     +G +Q  G
Sbjct: 92  LHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYG---NSVPIAPFNAVALGDEQNRG 151

Query: 158 RFVMNVKAVGRLRWKFGGWVSGRYRFDVDCVAVL 192
              + ++A GR+RWK G  ++G+Y   V C A +
Sbjct: 152 FVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

The following BLAST results are available for this feature:

BLAST of Sed0011249 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035776.1	9.8e-80	70.56	NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023533460.1	1.7e-79	70.56	NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6605814.1 NDR1/HIN1-l...	[more]
XP_022996419.1	2.2e-79	70.56	NDR1/HIN1-like protein 26 [Cucurbita maxima]	[more]
XP_022957698.1	1.1e-78	70.09	NDR1/HIN1-like protein 26 [Cucurbita moschata]	[more]
XP_038906799.1	1.5e-75	67.29	NDR1/HIN1-like protein 26 [Benincasa hispida]	[more]

BLAST of Sed0011249 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI03	2.6e-51	48.15	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ54	8.5e-26	37.66	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9SRN0	8.5e-26	36.57	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9FNH6	2.2e-10	25.68	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q8LD98	8.0e-08	27.74	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of Sed0011249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8N8	1.1e-79	70.56	NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111491649 PE=4 SV=1	[more]
A0A6J1H101	5.3e-79	70.09	NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111459163 PE=4 SV=...	[more]
A0A1S3AUK3	2.1e-75	67.91	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483002 PE=4 SV=1	[more]
A0A5D3C6B2	3.5e-75	67.91	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KN27	1.8e-74	67.44	NDR1/HIN1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G139020 PE=4 SV=1	[more]

BLAST of Sed0011249 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53730.1	1.9e-52	48.15	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G44220.1	5.3e-31	35.86	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	4.2e-28	36.56	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G22200.1	7.1e-28	32.99	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	6.0e-27	37.66	NDR1/HIN1-like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 81..187 e-value: 3.0E-8 score: 34.1
None	No IPR available	PANTHER	PTHR31415:SF20	NDR1/HIN1-LIKE PROTEIN 26	coord: 24..213
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 24..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011249.1	Sed0011249.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma