Sed0011212 (gene) Chayote v1

Overview


Name	Sed0011212
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nodulin 22
Location	LG12: 5818565 .. 5821704 (-)
RNA-Seq Expression	Sed0011212
Synteny	Sed0011212

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAAATGCCATAGTTGATGGGCATATTTAATAATTTAGCACAAAAAAAAAATCTCTTCCTATTTATTTGCTGATGTATTATATCTCTGCACTTAGCTTTCACGGCCCTCTCTTCCATAATTGCATTCTCTTCCCTTCGTTCCGATTCAATTCCCCCATTCTCTCAAATCCTTTCATCACATAATTTCATTTTTCAGTTCCCATTTCTGAAAAATTAGGGTTCTAATCCATTCTCTTTTTCGTTTGATTCCTTTATGATTCCCCTTTTTTGTACTCTGAACAGTAACCCCATCAAGATTTCGATTCCTTGCGAAATTCGTCCCTCGTTTTTCATCAGGGCATCTTTGATTTCCCTTTTGATTTTGGTTCTGACCCTCGTTTTTGTTTCTTCTTCAAAACCTATTCCGATTGTGAAGAACAACGCCACCGTCGCCGCCATGAAGGTCCACCCATTGCCGAGGAAGCGAAATATCGCCGTTCGCAATAACCCCAATTCGAGAATCTCTCTCGAAGATCATCAATCCGTTCTGACCCACAAGAAACTCAGGAGATTACCCCATATCTTCAGCCGGGTTCTCGAGCTTCCGTTTCGATCCGATGCCGAGGTTTCGGTGGAAGAGAATCCTGATTGCTTTCGATTCATTGCTGAAACTGATGGTAGCATTAGCGATGGAGTTAGGGCTCATGCTGTGGAAATCCATCCTGGGGTTATTAAGATCGTTGTGCGTGAGAATGGGTCGTTGGAAATGGCGATCGATGAGCTCGAATTGGATATGTGGAGGTTTCGGTTGCCCGAGACGACGCTGCCCGAGCTTGCAAGTGCTGCGTTTGTTGATGGGGAGCTTGTTGTTACAGTTCCAAAGGGGATTGAGGAGGAGAATTCTGAAGATGGTGGAGATATCTGGGGAGATGGAATGGAAGGTCGGCTTGTTCTTGTACAGTAAATTGAATCCTTTCCCTTTTTTCCTTTTGGTTTTTGTACTAACTGTTGGAAATTTCCCTTTTCATCATTGTTAATGTTGTTCTGGATTTCCTGCTAGTTTTCCATTGCTGAATAAACTGACCCATTAGCTTAAAAGGAACTTAGAAAGAAAAGGCTAATTGTTTCTATCTGAATGATCACAAGAACCTGAAACCTAAGAAGCACGGACACGGACACGAGATACGGATAAGACACGACACGGACACGTAGATACGCCATTATTTAAAAATGCAGGACACGGATACGTCGAGGACACGCGATTTAATATTTTAGTTAGTTATAAGTCTACTGTCTACCCATAACAATGTCTAAATATTTTAGTTTTTATCTCATTTTCCTTTCCTATATTTTATTTTCTCTTTTTCTTTCATTTTTTCATTTTAGTCCATCTATCTTTGATAGACATCATCATCGACGACCTCCACCAACACTATCTGTTGTCGTGTCATCCGCCATTGGAAACAAATAAGTCTTAATTGAGGTGTTCATGAAGTTTCCATGAAGTGTCCGAAATTGAAAATAATAATAATAAAAGAGGACACCGAATTTTGAGTGTTGGACACGTGTCTGACGAGTGTCCAGAAGTATCGATGTTGGACACGAGTACGACACGGATACGTTGTCAAAATAGAAGTGTCCGTGCTTCCTAGCCTGAAACTTAACACTAAACCATGAAACTTTTTTTTTTTTTCTCTTGATTTCAAAACTACATGTGGGGGTGGAATAATTCGAAACTTGATTGGGAGATTTACTTTAACCAGTTCAAGTTGACACGCAACTCTGAAACATTGATAATTTTGCCTTAGCATTTGCTTATGGTAACTTGCGTGTGCAATTTGAACTCCTTTTCTTTTCTCCCCACAACATTCTAACCTGACCCTGCAAGCTTTGAAACAACTTGTGTTGCAAAATATGGGTCTTCTTTGAGGATAATTGTTGCATCTGAATTGTTATCTGTTGGGTTGAGTGAAACTGAGTATAACAGCTAACAATTGACAACTCAAATGGATAGTTTTAGACAGATAATGGTTGAAATTACCAGCATGATTTTGGTCTGTTCTCTTAGATTAGATTCCCTTTTTGTAGTTACTCTTGAACCCTCGTTTGTTCAGACTCGTGGAGGAATCTCGTTAGTTGAAGTTTGGAACTTCAAGACATGTTTTTTTAAGGTCTTAGGTTTGAGTCTAACAAGTGAGTTTAATTGTAGATTTTTTTTTGTTGCCTCTCGAGTATGGGCCTGGGGACGGGCGCGGATGTCCTGAGCAGAGTAGAATGGAGCTCTACTTTTTCGATTTCACAAAAAAAAAAGTTTTTATGCTTCTTCCTTTATTGCCACTGAACTCTGATGCTAATTGGCAGTTTACCTTCATTTGTTAATTGGCAAGAAGAAGTTCTGAGACTTGATTGCCAATGCAATTTGTTAGTGGTCTCAGCCCTTTTCTAGATATCATTTTGTCCTCATCTTTTGATTGTACCTCAAAAGACTTGTCCTTCTCCGTGGTTTGGAAAGTATTGCTTCTCTCTTGTCCATTTCATGGGTCCTATATGTGGGCATAAACTCATTGCTTTTTTTTTTGCATTTAAACCATAATGGGGCACTTTTCATGCTAGCCAAAGATAACATAACAAACCTTCTTTTAAGCATTTCTTTCACATATGCCATTTTCTAGTTGGCAAATTCTTATTCCTAAATCCCTAAACTGCTTTCTGCTTGCCCATTCTTGTTCTGTAGATCTTCTTTTTCCTTTTTATGGTTGACCTGTTGATTTGAGTCATAGCTGCATTCATGCTCTTTGATTTCATATCTAGAAATTAATTTTCGAATATTGTAGCCACATGTTTTGTGACAAGTGTTTTTAGATTCTATATGGAGCCATTAAGTGGAATAAAATGAGAGCAACCTGTACATACTATGATGAACAAACAGAAAAGACTTATTATTGAAGTTCCATGTAGCTGTCCATGTGAATGGCATTAGTTTCAATTGTCATCATTTTATGGTGGCCATTTAGCATTGCCTTTTATGTGTAATAATCCTTTTGGACTTGAAATGATTGCAGAGGAATGGCCTACAAACCCCAACCATAATAATGGGTAATTATTTTGATGTAAAAAAAGTGATTGTTTGGGGGCATTACAAAATGTTATTGCGTTGGGG

mRNA sequence

CATAAATGCCATAGTTGATGGGCATATTTAATAATTTAGCACAAAAAAAAAATCTCTTCCTATTTATTTGCTGATGTATTATATCTCTGCACTTAGCTTTCACGGCCCTCTCTTCCATAATTGCATTCTCTTCCCTTCGTTCCGATTCAATTCCCCCATTCTCTCAAATCCTTTCATCACATAATTTCATTTTTCAGTTCCCATTTCTGAAAAATTAGGGTTCTAATCCATTCTCTTTTTCGTTTGATTCCTTTATGATTCCCCTTTTTTGTACTCTGAACAGTAACCCCATCAAGATTTCGATTCCTTGCGAAATTCGTCCCTCGTTTTTCATCAGGGCATCTTTGATTTCCCTTTTGATTTTGGTTCTGACCCTCGTTTTTGTTTCTTCTTCAAAACCTATTCCGATTGTGAAGAACAACGCCACCGTCGCCGCCATGAAGGTCCACCCATTGCCGAGGAAGCGAAATATCGCCGTTCGCAATAACCCCAATTCGAGAATCTCTCTCGAAGATCATCAATCCGTTCTGACCCACAAGAAACTCAGGAGATTACCCCATATCTTCAGCCGGGTTCTCGAGCTTCCGTTTCGATCCGATGCCGAGGTTTCGGTGGAAGAGAATCCTGATTGCTTTCGATTCATTGCTGAAACTGATGGTAGCATTAGCGATGGAGTTAGGGCTCATGCTGTGGAAATCCATCCTGGGGTTATTAAGATCGTTGTGCGTGAGAATGGGTCGTTGGAAATGGCGATCGATGAGCTCGAATTGGATATGTGGAGGTTTCGGTTGCCCGAGACGACGCTGCCCGAGCTTGCAAGTGCTGCGTTTGTTGATGGGGAGCTTGTTGTTACAGTTCCAAAGGGGATTGAGGAGGAGAATTCTGAAGATGGTGGAGATATCTGGGGAGATGGAATGGAAGGTCGGCTTGTTCTTGTACAGTAAATTGAATCCTTTCCCTTTTTTCCTTTTGGTTTTTGTACTAACTGTTGGAAATTTCCCTTTTCATCATTGTTAATGTTGTTCTGGATTTCCTGCTAGTTTTCCATTGCTGAATAAACTGACCCATTAGCTTAAAAGGAACTTAGAAAGAAAAGGCTAATTGTTTCTATCTGAATGATCACAAGAACCTGAAACCTAAGAAGCACGGACACGGACACGAGATACGGATAAGACACGACACGGACACGTAGATACGCCATTATTTAAAAATGCAGGACACGGATACGTCGAGGACACGCGATTTAATATTTTAGTTAGTTATAAGTCTACTGTCTACCCATAACAATGTCTAAATATTTTAGTTTTTATCTCATTTTCCTTTCCTATATTTTATTTTCTCTTTTTCTTTCATTTTTTCATTTTAGTCCATCTATCTTTGATAGACATCATCATCGACGACCTCCACCAACACTATCTGTTGTCGTGTCATCCGCCATTGGAAACAAATAAGTCTTAATTGAGGTGTTCATGAAGTTTCCATGAAGTGTCCGAAATTGAAAATAATAATAATAAAAGAGGACACCGAATTTTGAGTGTTGGACACGTGTCTGACGAGTGTCCAGAAGTATCGATGTTGGACACGAGTACGACACGGATACGTTGTCAAAATAGAAGTGTCCGTGCTTCCTAGCCTGAAACTTAACACTAAACCATGAAACTTTTTTTTTTTTTCTCTTGATTTCAAAACTACATGTGGGGGTGGAATAATTCGAAACTTGATTGGGAGATTTACTTTAACCAGTTCAAGTTGACACGCAACTCTGAAACATTGATAATTTTGCCTTAGCATTTGCTTATGGTAACTTGCGTGTGCAATTTGAACTCCTTTTCTTTTCTCCCCACAACATTCTAACCTGACCCTGCAAGCTTTGAAACAACTTGTGTTGCAAAATATGGGTCTTCTTTGAGGATAATTGTTGCATCTGAATTGTTATCTGTTGGGTTGAGTGAAACTGAGTATAACAGCTAACAATTGACAACTCAAATGGATAGTTTTAGACAGATAATGGTTGAAATTACCAGCATGATTTTGGTCTGTTCTCTTAGATTAGATTCCCTTTTTGTAGTTACTCTTGAACCCTCGTTTGTTCAGACTCGTGGAGGAATCTCGTTAGTTGAAGTTTGGAACTTCAAGACATGTTTTTTTAAGGTCTTAGGTTTGAGTCTAACAAGTGAGTTTAATTGTAGATTTTTTTTTGTTGCCTCTCGAGTATGGGCCTGGGGACGGGCGCGGATGTCCTGAGCAGAGTAGAATGGAGCTCTACTTTTTCGATTTCACAAAAAAAAAAGTTTTTATGCTTCTTCCTTTATTGCCACTGAACTCTGATGCTAATTGGCAGTTTACCTTCATTTGTTAATTGGCAAGAAGAAGTTCTGAGACTTGATTGCCAATGCAATTTGTTAGTGGTCTCAGCCCTTTTCTAGATATCATTTTGTCCTCATCTTTTGATTGTACCTCAAAAGACTTGTCCTTCTCCGTGGTTTGGAAAGTATTGCTTCTCTCTTGTCCATTTCATGGGTCCTATATGTGGGCATAAACTCATTGCTTTTTTTTTTGCATTTAAACCATAATGGGGCACTTTTCATGCTAGCCAAAGATAACATAACAAACCTTCTTTTAAGCATTTCTTTCACATATGCCATTTTCTAGTTGGCAAATTCTTATTCCTAAATCCCTAAACTGCTTTCTGCTTGCCCATTCTTGTTCTGTAGATCTTCTTTTTCCTTTTTATGGTTGACCTGTTGATTTGAGTCATAGCTGCATTCATGCTCTTTGATTTCATATCTAGAAATTAATTTTCGAATATTGTAGCCACATGTTTTGTGACAAGTGTTTTTAGATTCTATATGGAGCCATTAAGTGGAATAAAATGAGAGCAACCTGTACATACTATGATGAACAAACAGAAAAGACTTATTATTGAAGTTCCATGTAGCTGTCCATGTGAATGGCATTAGTTTCAATTGTCATCATTTTATGGTGGCCATTTAGCATTGCCTTTTATGTGTAATAATCCTTTTGGACTTGAAATGATTGCAGAGGAATGGCCTACAAACCCCAACCATAATAATGGGTAATTATTTTGATGTAAAAAAAGTGATTGTTTGGGGGCATTACAAAATGTTATTGCGTTGGGG

Coding sequence (CDS)

ATGATTCCCCTTTTTTGTACTCTGAACAGTAACCCCATCAAGATTTCGATTCCTTGCGAAATTCGTCCCTCGTTTTTCATCAGGGCATCTTTGATTTCCCTTTTGATTTTGGTTCTGACCCTCGTTTTTGTTTCTTCTTCAAAACCTATTCCGATTGTGAAGAACAACGCCACCGTCGCCGCCATGAAGGTCCACCCATTGCCGAGGAAGCGAAATATCGCCGTTCGCAATAACCCCAATTCGAGAATCTCTCTCGAAGATCATCAATCCGTTCTGACCCACAAGAAACTCAGGAGATTACCCCATATCTTCAGCCGGGTTCTCGAGCTTCCGTTTCGATCCGATGCCGAGGTTTCGGTGGAAGAGAATCCTGATTGCTTTCGATTCATTGCTGAAACTGATGGTAGCATTAGCGATGGAGTTAGGGCTCATGCTGTGGAAATCCATCCTGGGGTTATTAAGATCGTTGTGCGTGAGAATGGGTCGTTGGAAATGGCGATCGATGAGCTCGAATTGGATATGTGGAGGTTTCGGTTGCCCGAGACGACGCTGCCCGAGCTTGCAAGTGCTGCGTTTGTTGATGGGGAGCTTGTTGTTACAGTTCCAAAGGGGATTGAGGAGGAGAATTCTGAAGATGGTGGAGATATCTGGGGAGATGGAATGGAAGGTCGGCTTGTTCTTGTACAGTAA

Protein sequence

MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFVSSSKPIPIVKNNATVAAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDAEVSVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDELELDMWRFRLPETTLPELASAAFVDGELVVTVPKGIEEENSEDGGDIWGDGMEGRLVLVQ

Homology

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BLAST of Sed0011212 vs. NCBI nr
Match: XP_008438664.1 (PREDICTED: uncharacterized protein LOC103483704 [Cucumis melo] >KAA0049357.1 nodulin 22 [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-87
Identity = 186/241 (77.18%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 1   MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFV--------SSSKPIPI 60
           MI  F  LNSNPIKISIP EIRPSFF RAS  SLLI VLTLVFV        + SK I  
Sbjct: 1   MISHFRPLNSNPIKISIPFEIRPSFFTRASSFSLLIWVLTLVFVVVVVGVSPAPSKSIAT 60

Query: 61  VKNNATV---AAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLE 120
           +KN   +     MKVHPLPRKRNIAVRNNP SR SLED   +  HKKLRRLPHIFSRVLE
Sbjct: 61  LKNEFEINSTTVMKVHPLPRKRNIAVRNNPTSRNSLEDQSPLNNHKKLRRLPHIFSRVLE 120

Query: 121 LPFRSDAEVSVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDE 180
           LPFRSDA+V VEEN DCFRFIA TDG+ISDGVRAHAVEIHPGVIKIVVREN SLEMAIDE
Sbjct: 121 LPFRSDADVLVEENTDCFRFIAVTDGNISDGVRAHAVEIHPGVIKIVVRENESLEMAIDE 180

Query: 181 LELDMWRFRLPETTLPELASAAFVDGELVVTVPKGIEEENSED-GGDIWGDGMEGRLVLV 230
           LELDMWRFRLPETT PELASAAFVDGEL+VTVPKG +EENS+D GGDI+ D MEGRLVLV
Sbjct: 181 LELDMWRFRLPETTRPELASAAFVDGELIVTVPKGNDEENSDDGGGDIFRDEMEGRLVLV 240

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BLAST of Sed0011212 vs. NCBI nr
Match: XP_022138274.1 (uncharacterized protein LOC111009490 [Momordica charantia])

HSP 1 Score: 331.6 bits (849), Expect = 5.2e-87
Identity = 185/242 (76.45%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 1   MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVF-VSSSKPIPIVKNNATV 60
           MI  F  LN+NPIKISIP +IRP+ F RASLI LLI+ L LV   + +KPI  VKN   +
Sbjct: 1   MILPFPPLNNNPIKISIPFKIRPALFTRASLIFLLIIALVLVVSPAPTKPIVSVKNKPEI 60

Query: 61  ---AAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDA 120
               AMKVHPLPRKRNI VR NPNSR SLED QS L HKKLRRLPHIFSRVL+LPFRSDA
Sbjct: 61  KNSTAMKVHPLPRKRNITVRYNPNSRNSLED-QSHLNHKKLRRLPHIFSRVLZLPFRSDA 120

Query: 121 EVSVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDELELDMWR 180
           +V +EENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRE+GS+EMA+DELELDMWR
Sbjct: 121 DVLIEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRESGSVEMAMDELELDMWR 180

Query: 181 FRLPETTLPELASAAFVDGELVVTVPKGIEEENSE--DGGDIWG-------DGMEGRLVL 230
           FRLPETT PELASAAFVDGEL+VTVPKG EEE+SE  DGGDIWG       DGM GRLVL
Sbjct: 181 FRLPETTRPELASAAFVDGELIVTVPKGNEEESSEDDDGGDIWGDGSGSFRDGMGGRLVL 240

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BLAST of Sed0011212 vs. NCBI nr
Match: XP_004134135.1 (uncharacterized protein LOC101205778 [Cucumis sativus] >KGN56976.1 hypothetical protein Csa_010513 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 6.8e-87
Identity = 182/233 (78.11%), Postives = 194/233 (83.26%), Query Frame = 0


Query: 8   LNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFV-------SSSKPIPIVKNNATV- 67
           LNSNPIKISIP EIRPSFF RAS ISL I VLTLVF+       + SKPI  +KN   + 
Sbjct: 8   LNSNPIKISIPFEIRPSFFTRASSISLSIWVLTLVFIVVGGVSPAPSKPIASLKNEFEIN 67

Query: 68  --AAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDAE 127
              AMKVHPLPRKRNIAVRNN   R SLED   +  HKKLRRLPHIFSRVLELPFRSDA+
Sbjct: 68  STTAMKVHPLPRKRNIAVRNNTTLRNSLEDQSLLNNHKKLRRLPHIFSRVLELPFRSDAD 127

Query: 128 VSVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDELELDMWRF 187
           V VEENPDCFRFIAETDG+ISDGVRAHAVEIHPGVIKIVVREN SLEM+IDELELDMWRF
Sbjct: 128 VLVEENPDCFRFIAETDGNISDGVRAHAVEIHPGVIKIVVRENESLEMSIDELELDMWRF 187

Query: 188 RLPETTLPELASAAFVDGELVVTVPKGIEEENSED-GGDIWGDGMEGRLVLVQ 230
           RLPETT PELASAAFVDGEL+VTVPKG +E NS+D GGDI+ D MEGRLVLVQ
Sbjct: 188 RLPETTRPELASAAFVDGELIVTVPKGNDEGNSDDGGGDIFRDEMEGRLVLVQ 240

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BLAST of Sed0011212 vs. NCBI nr
Match: XP_022979495.1 (uncharacterized protein LOC111479182 [Cucurbita maxima])

HSP 1 Score: 319.3 bits (817), Expect = 2.7e-83
Identity = 177/231 (76.62%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 1   MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFVSSSKPIPIVKNNA--T 60
           MIP F  LN+N I+IS           RASLISLLILVL L  V+ S+PI  V+     T
Sbjct: 1   MIPPFPFLNANSIQIS-----------RASLISLLILVLAL--VALSEPIASVEELEINT 60

Query: 61  VAAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDAEV 120
             AMKVHPLPRKRNIAVRNNPNSR SLED QS+L HKKLRRLPH+FSRVLELPFRSDA+V
Sbjct: 61  TTAMKVHPLPRKRNIAVRNNPNSRNSLED-QSLLNHKKLRRLPHVFSRVLELPFRSDADV 120

Query: 121 SVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDELELDMWRFR 180
            VEENPDCFRFIAETDG+ISDGVRAHAVEIHPGVIKIVVRE  SLEM +DELELDMWRFR
Sbjct: 121 LVEENPDCFRFIAETDGNISDGVRAHAVEIHPGVIKIVVRETASLEMTMDELELDMWRFR 180

Query: 181 LPETTLPELASAAFVDGELVVTVPKGIEEENSEDGGDIWGDGMEGRLVLVQ 230
           LPETT PELASAAFVDGEL+VTVPKG EE + + GGDIWGD MEGRLVLVQ
Sbjct: 181 LPETTRPELASAAFVDGELIVTVPKGNEENSDDGGGDIWGDEMEGRLVLVQ 217

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BLAST of Sed0011212 vs. NCBI nr
Match: KAG6582302.1 (hypothetical protein SDJN03_22304, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018714.1 hypothetical protein SDJN02_20585, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.9 bits (816), Expect = 3.5e-83
Identity = 177/231 (76.62%), Postives = 191/231 (82.68%), Query Frame = 0


Query: 1   MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFVSSSKPIPIVKNNA--T 60
           MI  F +LN+N I+IS           RASLISLLILVL L  V+SS+PI  V+     T
Sbjct: 1   MILPFPSLNANSIQIS-----------RASLISLLILVLAL--VASSEPIASVEELEINT 60

Query: 61  VAAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDAEV 120
             AMKVHPLPRKRNIAVRNNPNSR SLED QS+L HKKLRRLPH+FSRVLELPFRSDA+V
Sbjct: 61  TTAMKVHPLPRKRNIAVRNNPNSRNSLED-QSLLNHKKLRRLPHVFSRVLELPFRSDADV 120

Query: 121 SVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDELELDMWRFR 180
            VEENPDCFRFIAETDG+ISDGVRAHAVEIHPGVIKIVVRE  SLEM +DELELDMWRFR
Sbjct: 121 LVEENPDCFRFIAETDGNISDGVRAHAVEIHPGVIKIVVRETASLEMTMDELELDMWRFR 180

Query: 181 LPETTLPELASAAFVDGELVVTVPKGIEEENSEDGGDIWGDGMEGRLVLVQ 230
           LPETT PELASAAFVDGEL+VTVPKG EE + + GGDIWGD MEGRLVLVQ
Sbjct: 181 LPETTRPELASAAFVDGELIVTVPKGNEENSDDGGGDIWGDEMEGRLVLVQ 217

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BLAST of Sed0011212 vs. ExPASy TrEMBL
Match: A0A5A7U4T4 (Nodulin 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006010 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.6e-88
Identity = 186/241 (77.18%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 1   MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFV--------SSSKPIPI 60
           MI  F  LNSNPIKISIP EIRPSFF RAS  SLLI VLTLVFV        + SK I  
Sbjct: 1   MISHFRPLNSNPIKISIPFEIRPSFFTRASSFSLLIWVLTLVFVVVVVGVSPAPSKSIAT 60

Query: 61  VKNNATV---AAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLE 120
           +KN   +     MKVHPLPRKRNIAVRNNP SR SLED   +  HKKLRRLPHIFSRVLE
Sbjct: 61  LKNEFEINSTTVMKVHPLPRKRNIAVRNNPTSRNSLEDQSPLNNHKKLRRLPHIFSRVLE 120

Query: 121 LPFRSDAEVSVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDE 180
           LPFRSDA+V VEEN DCFRFIA TDG+ISDGVRAHAVEIHPGVIKIVVREN SLEMAIDE
Sbjct: 121 LPFRSDADVLVEENTDCFRFIAVTDGNISDGVRAHAVEIHPGVIKIVVRENESLEMAIDE 180

Query: 181 LELDMWRFRLPETTLPELASAAFVDGELVVTVPKGIEEENSED-GGDIWGDGMEGRLVLV 230
           LELDMWRFRLPETT PELASAAFVDGEL+VTVPKG +EENS+D GGDI+ D MEGRLVLV
Sbjct: 181 LELDMWRFRLPETTRPELASAAFVDGELIVTVPKGNDEENSDDGGGDIFRDEMEGRLVLV 240

[Close]

BLAST of Sed0011212 vs. ExPASy TrEMBL
Match: A0A1S3AXL9 (uncharacterized protein LOC103483704 OS=Cucumis melo OX=3656 GN=LOC103483704 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.6e-88
Identity = 186/241 (77.18%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 1   MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFV--------SSSKPIPI 60
           MI  F  LNSNPIKISIP EIRPSFF RAS  SLLI VLTLVFV        + SK I  
Sbjct: 1   MISHFRPLNSNPIKISIPFEIRPSFFTRASSFSLLIWVLTLVFVVVVVGVSPAPSKSIAT 60

Query: 61  VKNNATV---AAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLE 120
           +KN   +     MKVHPLPRKRNIAVRNNP SR SLED   +  HKKLRRLPHIFSRVLE
Sbjct: 61  LKNEFEINSTTVMKVHPLPRKRNIAVRNNPTSRNSLEDQSPLNNHKKLRRLPHIFSRVLE 120

Query: 121 LPFRSDAEVSVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDE 180
           LPFRSDA+V VEEN DCFRFIA TDG+ISDGVRAHAVEIHPGVIKIVVREN SLEMAIDE
Sbjct: 121 LPFRSDADVLVEENTDCFRFIAVTDGNISDGVRAHAVEIHPGVIKIVVRENESLEMAIDE 180

Query: 181 LELDMWRFRLPETTLPELASAAFVDGELVVTVPKGIEEENSED-GGDIWGDGMEGRLVLV 230
           LELDMWRFRLPETT PELASAAFVDGEL+VTVPKG +EENS+D GGDI+ D MEGRLVLV
Sbjct: 181 LELDMWRFRLPETTRPELASAAFVDGELIVTVPKGNDEENSDDGGGDIFRDEMEGRLVLV 240

[Close]

BLAST of Sed0011212 vs. ExPASy TrEMBL
Match: A0A6J1C9P7 (uncharacterized protein LOC111009490 OS=Momordica charantia OX=3673 GN=LOC111009490 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.9e-87
Identity = 186/242 (76.86%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 1   MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVF-VSSSKPIPIVKNNATV 60
           MI  F  LN+NPIKISIP +IRP+ F RASLI LLI+ L LV   + +KPI  VKN   +
Sbjct: 1   MILPFPPLNNNPIKISIPFKIRPALFTRASLIFLLIIALVLVVSPAPTKPIVSVKNKPEI 60

Query: 61  ---AAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDA 120
               AMKVHPLPRKRNI VR NPNSR SLED QS L HKKLRRLPHIFSRVLELPFRSDA
Sbjct: 61  KNSTAMKVHPLPRKRNITVRYNPNSRNSLED-QSHLNHKKLRRLPHIFSRVLELPFRSDA 120

Query: 121 EVSVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDELELDMWR 180
           +V +EENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRE+GS+EMA+DELELDMWR
Sbjct: 121 DVLIEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRESGSVEMAMDELELDMWR 180

Query: 181 FRLPETTLPELASAAFVDGELVVTVPKGIEEENSE--DGGDIWG-------DGMEGRLVL 230
           FRLPETT PELASAAFVDGEL+VTVPKG EEE+SE  DGGDIWG       DGM GRLVL
Sbjct: 181 FRLPETTRPELASAAFVDGELIVTVPKGNEEESSEDDDGGDIWGDGSGSFRDGMGGRLVL 240

[Close]

BLAST of Sed0011212 vs. ExPASy TrEMBL
Match: A0A0A0LA89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146610 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.3e-87
Identity = 182/233 (78.11%), Postives = 194/233 (83.26%), Query Frame = 0


Query: 8   LNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFV-------SSSKPIPIVKNNATV- 67
           LNSNPIKISIP EIRPSFF RAS ISL I VLTLVF+       + SKPI  +KN   + 
Sbjct: 8   LNSNPIKISIPFEIRPSFFTRASSISLSIWVLTLVFIVVGGVSPAPSKPIASLKNEFEIN 67

Query: 68  --AAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDAE 127
              AMKVHPLPRKRNIAVRNN   R SLED   +  HKKLRRLPHIFSRVLELPFRSDA+
Sbjct: 68  STTAMKVHPLPRKRNIAVRNNTTLRNSLEDQSLLNNHKKLRRLPHIFSRVLELPFRSDAD 127

Query: 128 VSVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDELELDMWRF 187
           V VEENPDCFRFIAETDG+ISDGVRAHAVEIHPGVIKIVVREN SLEM+IDELELDMWRF
Sbjct: 128 VLVEENPDCFRFIAETDGNISDGVRAHAVEIHPGVIKIVVRENESLEMSIDELELDMWRF 187

Query: 188 RLPETTLPELASAAFVDGELVVTVPKGIEEENSED-GGDIWGDGMEGRLVLVQ 230
           RLPETT PELASAAFVDGEL+VTVPKG +E NS+D GGDI+ D MEGRLVLVQ
Sbjct: 188 RLPETTRPELASAAFVDGELIVTVPKGNDEGNSDDGGGDIFRDEMEGRLVLVQ 240

[Close]

BLAST of Sed0011212 vs. ExPASy TrEMBL
Match: A0A6J1ITF0 (uncharacterized protein LOC111479182 OS=Cucurbita maxima OX=3661 GN=LOC111479182 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 177/231 (76.62%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 1   MIPLFCTLNSNPIKISIPCEIRPSFFIRASLISLLILVLTLVFVSSSKPIPIVKNNA--T 60
           MIP F  LN+N I+IS           RASLISLLILVL L  V+ S+PI  V+     T
Sbjct: 1   MIPPFPFLNANSIQIS-----------RASLISLLILVLAL--VALSEPIASVEELEINT 60

Query: 61  VAAMKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDAEV 120
             AMKVHPLPRKRNIAVRNNPNSR SLED QS+L HKKLRRLPH+FSRVLELPFRSDA+V
Sbjct: 61  TTAMKVHPLPRKRNIAVRNNPNSRNSLED-QSLLNHKKLRRLPHVFSRVLELPFRSDADV 120

Query: 121 SVEENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENGSLEMAIDELELDMWRFR 180
            VEENPDCFRFIAETDG+ISDGVRAHAVEIHPGVIKIVVRE  SLEM +DELELDMWRFR
Sbjct: 121 LVEENPDCFRFIAETDGNISDGVRAHAVEIHPGVIKIVVRETASLEMTMDELELDMWRFR 180

Query: 181 LPETTLPELASAAFVDGELVVTVPKGIEEENSEDGGDIWGDGMEGRLVLVQ 230
           LPETT PELASAAFVDGEL+VTVPKG EE + + GGDIWGD MEGRLVLVQ
Sbjct: 181 LPETTRPELASAAFVDGELIVTVPKGNEENSDDGGGDIWGDEMEGRLVLVQ 217

[Close]

BLAST of Sed0011212 vs. TAIR 10
Match: AT3G22530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 178.7 bits (452), Expect = 5.3e-45
Identity = 113/206 (54.85%), Postives = 139/206 (67.48%), Query Frame = 0


Query: 30  SLISLLILVLTLVFVSSSKPIPIVKNNATVAAMKVHPLPRKRNIAVRNNPNSRISLEDHQ 89
           SL S L+L L L+  S  KP P         AM+VHP+PR  N       N+ I    H 
Sbjct: 10  SLFSYLLL-LNLI-QSIDKPNP--------EAMRVHPIPRNIN-------NTLIHHHHHN 69

Query: 90  SVL-THKKLRRLPHIFSRVLELPFRSDAEVSVEENPDCFRFIAETDGSIS-DG-VRAHAV 149
                 K LRRLPHIF+RVLELP RS+A+V+VEE  DCFRF+AET G  + DG +RA+ V
Sbjct: 70  PTREPGKNLRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMV 129

Query: 150 EIHPGVIKIVVRENG--SLEMAIDELELDMWRFRLPETTLPELASAAFVDGELVVTVPKG 209
           EIHPG+ KIVVR NG  SL +++DELELD+WRFRLPE+T PEL + A VDG+L+VTVPK 
Sbjct: 130 EIHPGITKIVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPKN 189

Query: 210 IEEENSEDGGDIWGDGM-EGRLVLVQ 230
            EEE+ + GG  +G G+  GRLVLVQ
Sbjct: 190 AEEEDDDGGGGDFGQGIGSGRLVLVQ 198

[Close]

BLAST of Sed0011212 vs. TAIR 10
Match: AT4G14830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22530.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 164.9 bits (416), Expect = 7.9e-41
Identity = 92/154 (59.74%), Postives = 110/154 (71.43%), Query Frame = 0


Query: 62  MKVHPLPRKRNIAVRNNPNSRISLEDHQSVLTHKKLRRLPHIFSRVLELPFRSDAEVSVE 121
           MK+HPLPR        N N+ I      +    KKLRRLPHIFSRVLELP +SDA+V+VE
Sbjct: 1   MKIHPLPR------NENNNNLIHHARDPTREPGKKLRRLPHIFSRVLELPLKSDADVAVE 60

Query: 122 ENPDCFRFIAETDGSISDGVRAHAVEIHPGVIKIVVRENG--SLEMAIDELELDMWRFRL 181
           E+ DCFRF+AETDG    GVRA+ VEIHPGV KI+VR NG  SL +++DELELD+WRFRL
Sbjct: 61  ESHDCFRFVAETDGGGGGGVRAYMVEIHPGVTKILVRTNGSSSLGLSLDELELDVWRFRL 120

Query: 182 PETTLPELASA-AFVDGELVVTVPKGIEEENSED 213
           PE+T PEL +     DGEL+VTVPK   E+N  D
Sbjct: 121 PESTRPELVTVDCDGDGELIVTVPK--IEDNGRD 146

The following BLAST results are available for this feature:

BLAST of Sed0011212 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438664.1	1.4e-87	77.18	PREDICTED: uncharacterized protein LOC103483704 [Cucumis melo] >KAA0049357.1 nod...	[more]
XP_022138274.1	5.2e-87	76.45	uncharacterized protein LOC111009490 [Momordica charantia]	[more]
XP_004134135.1	6.8e-87	78.11	uncharacterized protein LOC101205778 [Cucumis sativus] >KGN56976.1 hypothetical ...	[more]
XP_022979495.1	2.7e-83	76.62	uncharacterized protein LOC111479182 [Cucurbita maxima]	[more]
KAG6582302.1	3.5e-83	76.62	hypothetical protein SDJN03_22304, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0011212 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0011212 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4T4	6.6e-88	77.18	Nodulin 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006010 PE...	[more]
A0A1S3AXL9	6.6e-88	77.18	uncharacterized protein LOC103483704 OS=Cucumis melo OX=3656 GN=LOC103483704 PE=...	[more]
A0A6J1C9P7	1.9e-87	76.86	uncharacterized protein LOC111009490 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A0A0LA89	3.3e-87	78.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146610 PE=4 SV=1	[more]
A0A6J1ITF0	1.3e-83	76.62	uncharacterized protein LOC111479182 OS=Cucurbita maxima OX=3661 GN=LOC111479182...	[more]

BLAST of Sed0011212 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22530.1	5.3e-45	54.85	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G14830.1	7.9e-41	59.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33879	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 62..229
None	No IPR available	CDD	cd00298	ACD_sHsps_p23-like	coord: 120..203 e-value: 2.72375E-4 score: 36.7983

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011212.1	Sed0011212.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane