Sed0011196 (gene) Chayote v1

Overview


Name	Sed0011196
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription initiation factor TFIID subunit 11
Location	LG04: 5875410 .. 5879685 (-)
RNA-Seq Expression	Sed0011196
Synteny	Sed0011196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTGATCAATTCGCAAAATATTTCCACAAAAAAAATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTCGAGGAGCAGGAAGAATCTCCGCCGAACTCCCCCTCCGCCGCCGACGATCTCGAAATTCAGACCAATGCCGCCGCCACCGCCGCCGACGCTCTTGATTTGCACGACGGCGACGATGACCCAAAATCCGCTGCTGCCGCCGCCACAAATTCCGGTATTCCTTCTGGACCGTCTACTTCTATGTTTGTTTCATCTTCCTCCAATGTCTCCGCCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTGGAAGTTGAGCTCGCCAAATTCCCCTCCAGCGGCGATCCAGATAAGATGGCCAAGATGCAGTATGTTTTCTTGCCTCTCCCAATATATAGATTTGTCTTTTGCTTTTAAATGATCTTCTGCTTCCCTTAGTCTCAACGTTTTCGTTAACTGTGATGCTAAGAAATACTTCCTCTGTCGATTTTCTTGTCATGGTTATGATAATTCTTAGGTTAATTTACAAATTCTCAGCATTGATTGCGTTTGTGAACGGTTTCTCTTGAGCTTATATATAGTTGATGATATGAAATTACAGAAGGGTGGAGAGTCAAAACTGATACGAAGGAAAATCCTAGCTAGTAAGGTTTAGAAAGGCCTCCTATTAACCAAAAGATTATTAAGATTGTAATTTGTAGAGGGGATGGCATTTAAACCAAGAGAGAATCATAATAGAAATAGAATCTTAGAGACTATCAGAAGAAAATGAGGTTGTTTCTTTCAAACCAAATAACCAAAAAGCGAAAGCTCTATTCCTTTGTTGGCAAAGATAGGGATTTTTTTCTTTTTTCTTTTTTTGAGTTCAACAAAAGAGGATTGATGTGTTATGAAAATGACAATCAACAATTAAAAGAAAACTGTAAAAAAGTGTGAGAGAAGAACCCACAGAATTTACATGGTTCACTAACGGTGTGTTAGCTACATCCACGAGTAGAGGTGAGAAAATTTTATAATGGAGAGTGTGAATTGCAAAATGTCAATCGTAGGGGGCTAGAGTTTTAAGAGAGTTTATATAGTGCACTCTCACAAAATCCTATTATAGATAACGCCCAATTATATAAAAGTTCATGTATGAAAATAGAAACCTAAATGTATATTTCGTCTAGGCTTCAGGGCGTTGTTCTCGATCTCCCACCATGGGCCTCGCCCCTAGGACCTCGACTCGCTCACCGGGCAGCGAGACCCCGACTAAGTAATCATGGGGCATCAAACAGTTCAAGACATATCTCAATATGAGAGATTCGAACCCATGACCTTTTGGTTCATAGTCCACATTATTGCCAATGAGCTATTGCTCTTGTTGGCAAAGATGGGGAATTAACATCATGCTGTTGGGAATAGCCATAATCTGGTTCAAGACATTAGAACACATGGACCAATATTTGATCGGAAGGGGCATTGGGAAAGAAAGATGGTCTTGTGTCTCATCACTCAGTAGTATCAGTTGATAGAATGCTGACATCAAACACTCCATAGATAAAACTAGGTAAGTAGGCATTTTATTTTAATGCAATAACCACATCAGTCGGTAATCGGTTCCTCTTGCAAGTTTGAGGATCAATACCCCTAGATTTTTGTGGAATAAGGTAGATCACTAGTGGAACTAAATCACCTCCTTTATATGAAGAGCCAACACTGGTCAGGTGTTTTCTCAACTTTCCAATGATGTTCAATTTTTTTGTATGGTGTAGTCCTTTGGTCAGGAAATCATCAGTTGATTGGTATGGATATTGTTATCTAGTTTCTCATTTGGAATATTGATAATTTTGTAAAATTCACGATCTCTCAATGCCCTTGACTCCTTGCAAAATATTATGCTTTGAATTTGGCCTAGCTATTGCATGTTGCTTCCTCCTTTTCCAAATTACCACACATTCCCATTAAGAACAGTGCACTGGCCTTCAGTTTATTTTCTTCATCAAGATATTCAAATGGGTTTGCTTCTAAGATAGGCGTACTCGGTACTACTTCCTCCCAATTGCAAGTCCTGCCTCTCTTTGTCCTCGACTATTGTCCTTTCATCCCGCTTTCCATACTTGACTATTGTCCAACCACCTCTACTGAACTCTCTTCCACTAACGCTAGCTGCATTTCCATCCTCATTCCCATCACCCAGGAATACCAAAATTGATATGAACCAGCCTTGAAAGCCAATTTCTATCTATTTATTTATATCGCAAGAGTTCAGCATAAAAAAAGTGTAGCAAGGGGAATTCGAGAGCCCCAATCTCTCCAGTCTCTCTCAAATTGAGAAAGCCACTTAAATACAAAATGAATCTAACATAAAGAAAAAGTAAGGATTAAATACTCCCTTCTCCTGACAGCCCTAATAAACTCGTGTGGGACCCTCCATCTCTGACTAATTTGTAAGCATCGTCATTCTTTCTTATTTTTTCCCCTTTGAGTATACATCTTGAGCATCGGGGTCGTGTCATGCTCCTTCAAAACCACTCTTTATTTTGAATCTTTAATTTGAATGGCTCAATGATTGAAACTTATGTTCAGCTTTTATGGCCATCCATTAAGGGCCTAATTTTGAACAAAATGGTGTAAGACAAAGACTACTATTTGTCATCAAGCTGAAAGTCATGAATTTTTATCCCATCGTTTGGTATATAGACTAATTGTACATTACTTGTTTGGTAGTGGAATGTACTTCATTTTTATTTAAAACTTAGGTAGGAACTAAGTCCTTTATTCGGGACAATTAGGATTGTGTGCTTCAATTTCTTAAGCTTCTAGCGTGTTCTTGTACCTTCCAGTTTCTCTGGTACCTTCCTAAATATTTTCTCTTGTCATGATACTCACTCTGGGCTTTCGTCCTATTTATAATATAAGTCCTGCTTGGAAAAAGATGCACAAATTTTTGGCTGTTGCTCCAGAGAATTGGTCGGAAATGACTATTTAAGATTAATGCAAGATCATTTTTGTTCACCAGGATGCTTGCTTGAGTATCTTTATTTATTTGTTAATTTATTTATTCAAGTACTTGTTTAGGTTTCTTTATGGGTGATCTTTAAATGCTGCATTATAAAAAGTTCACTTTAGAAATAACTTTGTTGCGTCTCCAAGGGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCTCCTCAAGGTCCCGAGTTCGAGTCTTCCCTGTGACATTACTCCTTCGATGTCTCCGGTGCCTGACCTAGGGACGGGCGTGGCTCCTTAATTCAAAGAAAGAAAAAGAAATAACTTTGTTGCAAGTGTAACTTGTCTAACATTTTCCAGAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGGTATGAATCTTAACATTTTTTTTCATAGTGAGACATTAGAGATGGCAAAGAAGGATCGGGTGAGAATACCTTCTTCATTCCCGACCCGGGGGAATTTTAATCAGTCTCAACCTCATTCTCTTAGGGTCTAAGATGATTTTGGTGGATGGGCGTGAGCTAGCTATTGGGGTTTCTTTTTTATGAAGCATTAATCTTTATGAACATAAACTTGATCCATCTTGTTTCCTTTCACTTGTAAAGTGTAGCTATTAGCTAGCATCTCAGGAACACAGAAAATTTCTGTACCGATGACGATTGTAGTGTCTGGGATAGCAAAAATGTTCGTTGGTGAACTCGTAGAATCCGGTACGTATAAACTTTTCTAAAACCCAATTCATTGCTCATGTAGGACTCAGGAAAGATGCATTTTTTTTTTCTCGACTGTTTATAGCATTGTGAAGATCATGCATATTCCAAAATGACATTGACTCACTTCAGTACTTCTATTTTGTTTCAGCAAGAGTTGTTATGGCAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCTTATAGAAGATCAAAGCTTGAAGGTAAGATTCCAAGGAAATCAGTGCCGAGGCTCTTTCGTTAATCTGTCTGTTTCAGTTTATAATCTTTGGATTAGATTTCAATATAAAACCTCCAGCTTAGGCAAACAATCTCATATATATTACTAAAATTTCTAACCCTTTTGGTACAAATTGGCTTCTCAATTTTATCACTCACAAACTACTGAAAACCGAGGAAAACTCGAACATGGATTTACATGTTAATAGACACATAATAATTGTATAGTCTCCAAGGGATGAC

mRNA sequence

AAGTGATCAATTCGCAAAATATTTCCACAAAAAAAATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTCGAGGAGCAGGAAGAATCTCCGCCGAACTCCCCCTCCGCCGCCGACGATCTCGAAATTCAGACCAATGCCGCCGCCACCGCCGCCGACGCTCTTGATTTGCACGACGGCGACGATGACCCAAAATCCGCTGCTGCCGCCGCCACAAATTCCGGTATTCCTTCTGGACCGTCTACTTCTATGTTTGTTTCATCTTCCTCCAATGTCTCCGCCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTGGAAGTTGAGCTCGCCAAATTCCCCTCCAGCGGCGATCCAGATAAGATGGCCAAGATGCAAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTATTAGCTAGCATCTCAGGAACACAGAAAATTTCTGTACCGATGACGATTGTAGTGTCTGGGATAGCAAAAATGTTCGTTGGTGAACTCGTAGAATCCGCAAGAGTTGTTATGGCAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCTTATAGAAGATCAAAGCTTGAAGGTAAGATTCCAAGGAAATCAGTGCCGAGGCTCTTTCGTTAATCTGTCTGTTTCAGTTTATAATCTTTGGATTAGATTTCAATATAAAACCTCCAGCTTAGGCAAACAATCTCATATATATTACTAAAATTTCTAACCCTTTTGGTACAAATTGGCTTCTCAATTTTATCACTCACAAACTACTGAAAACCGAGGAAAACTCGAACATGGATTTACATGTTAATAGACACATAATAATTGTATAGTCTCCAAGGGATGAC

Coding sequence (CDS)

ATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTCGAGGAGCAGGAAGAATCTCCGCCGAACTCCCCCTCCGCCGCCGACGATCTCGAAATTCAGACCAATGCCGCCGCCACCGCCGCCGACGCTCTTGATTTGCACGACGGCGACGATGACCCAAAATCCGCTGCTGCCGCCGCCACAAATTCCGGTATTCCTTCTGGACCGTCTACTTCTATGTTTGTTTCATCTTCCTCCAATGTCTCCGCCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTGGAAGTTGAGCTCGCCAAATTCCCCTCCAGCGGCGATCCAGATAAGATGGCCAAGATGCAAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTATTAGCTAGCATCTCAGGAACACAGAAAATTTCTGTACCGATGACGATTGTAGTGTCTGGGATAGCAAAAATGTTCGTTGGTGAACTCGTAGAATCCGCAAGAGTTGTTATGGCAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCTTATAGAAGATCAAAGCTTGAAGGTAAGATTCCAAGGAAATCAGTGCCGAGGCTCTTTCGTTAA

Protein sequence

MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPKSAAAAATNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVESARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR

Homology

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BLAST of Sed0011196 vs. NCBI nr
Match: KAG7028341.1 (Transcription initiation factor TFIID subunit 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 211/223 (94.62%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATA-ADALDLHDGDDDPKSAAAAA 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AATA ADALDLHDGDD+PKSAAAAA
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADALDLHDGDDEPKSAAAAA 60

Query: 61  TNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           TNSGIPS  +TS+FVSSSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 SARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           +ARVVM ERNDSG IRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

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BLAST of Sed0011196 vs. NCBI nr
Match: XP_022940909.1 (transcription initiation factor TFIID subunit 11 [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 3.6e-101
Identity = 210/223 (94.17%), Postives = 215/223 (96.41%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATA-ADALDLHDGDDDPKSAAAAA 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AAT  ADALDLHDGDD+PKSAAAAA
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAA 60

Query: 61  TNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           TNSGIPS  +TS+FVSSSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 SARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           +ARVVM ERNDSG IRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

[Close]

BLAST of Sed0011196 vs. NCBI nr
Match: KAG6596814.1 (Transcription initiation factor TFIID subunit 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.9 bits (969), Expect = 6.1e-101
Identity = 210/223 (94.17%), Postives = 215/223 (96.41%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATA-ADALDLHDGDDDPKSAAAAA 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AATA ADALDLHDGDD+PKSAAAAA
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADALDLHDGDDEPKSAAAAA 60

Query: 61  TNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
            NSGIPS  +TS+FVSSSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  KNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 SARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           +ARVVM ERNDSG IRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

[Close]

BLAST of Sed0011196 vs. NCBI nr
Match: XP_023538856.1 (transcription initiation factor TFIID subunit 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 4.0e-100
Identity = 211/225 (93.78%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATA-ADALDLHDGDDDPKSAAAA- 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AATA ADALDLHDGDD+PKSAAAA 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADALDLHDGDDEPKSAAAAA 60

Query: 61  -ATNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKM 120
            ATNSGIPS  +TS+FVSSSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKM
Sbjct: 61  TATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKM 120

Query: 121 QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL 180
           QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL
Sbjct: 121 QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL 180

Query: 181 VESARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           VE+ARVVM ERNDSG IRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 VETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 225

[Close]

BLAST of Sed0011196 vs. NCBI nr
Match: XP_023005534.1 (transcription initiation factor TFIID subunit 11 [Cucurbita maxima])

HSP 1 Score: 374.4 bits (960), Expect = 6.8e-100
Identity = 208/224 (92.86%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATA-ADALDLHDGDDDPK-SAAAA 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AATA ADA+DLHDGDDDPK +AAAA
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAA 60

Query: 61  ATNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQ 120
           ATNSG+PS  +TS+FVSSSSN+SAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQ
Sbjct: 61  ATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQ 120

Query: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180
           AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV
Sbjct: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180

Query: 181 ESARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           E+ARVVM ERNDSG IRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 ETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 224

[Close]

BLAST of Sed0011196 vs. ExPASy Swiss-Prot
Match: Q9M565 (Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702 GN=TAF11 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-53
Identity = 127/223 (56.95%), Postives = 155/223 (69.51%), Query Frame = 0


Query: 1   MKQSKDPFEAAF-EEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPKSAAAAA 60
           MK SKDPFEAA  EEQEESPP SP         +       D     D D+ P       
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEID--QTQDEDERPVDVRRPM 60

Query: 61  TNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
             +       TS+ V+ + N     K K++D+EEEEEN++VEL K+P+S DP KMAKMQ 
Sbjct: 61  KKA------KTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQT 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVE
Sbjct: 121 ILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVE 180

Query: 181 SARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           +ARVVMAER +SGPIRPCH+RE+YRR KLEGK+P++SVPRLFR
Sbjct: 181 TARVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

[Close]

BLAST of Sed0011196 vs. ExPASy Swiss-Prot
Match: F4HR03 (Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=3702 GN=TAF11B PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.8e-37
Identity = 106/223 (47.53%), Postives = 130/223 (58.30%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPKSAAAAAT 60
           MK SKDPFEAA EEQEESP           ++T             +GD+          
Sbjct: 32  MKHSKDPFEAAMEEQEESP-----------VETEQTL---------EGDE---------- 91

Query: 61  NSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA-KMQA 120
                                A  K K     E +   EVE  K  +  DP   A KMQ 
Sbjct: 92  --------------------RAVKKCKTSVVAEAKNKDEVEFTKNITGADPVTRANKMQK 151

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVE
Sbjct: 152 ILSQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVE 204

Query: 181 SARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           +ARVVM ER +SGPIRPCH+RE+YRR KL+GK+P++SV RLFR
Sbjct: 212 TARVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

[Close]

BLAST of Sed0011196 vs. ExPASy Swiss-Prot
Match: Q99JX1 (Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf11 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.0e-18
Identity = 75/188 (39.89%), Postives = 112/188 (59.57%), Query Frame = 0


Query: 33  TNAAATAADALDL-----HDGDDDPKSAAA--AATNSGIPSGPSTSMFVSSSSNVSAAPK 92
           T  A  AAD   +      DGD D K AAA  +   S   S  + +   +SS    AA K
Sbjct: 24  TPGALVAADTEGIPEETDRDGDADLKEAAAEESELKSQDVSDVTAAERENSSLLTPAAKK 83

Query: 93  TKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANM 152
            K D ++++E+  +V         D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +
Sbjct: 84  LKLDIKDKKEKKQKV---------DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAI 143

Query: 153 KRLLASISGTQKISVPMTIVVSGIAKMFVGELVESARVVMAERNDSGPIRPCHLREAYRR 212
           KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  ++ P++P H+REA RR
Sbjct: 144 KRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGETPPLQPKHMREAVRR 201

Query: 213 SKLEGKIP 214
            K +G+IP
Sbjct: 204 LKSKGQIP 201

[Close]

BLAST of Sed0011196 vs. ExPASy Swiss-Prot
Match: Q54XM9 (Transcription initiation factor TFIID subunit 11 OS=Dictyostelium discoideum OX=44689 GN=taf11 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.4e-17
Identity = 62/175 (35.43%), Postives = 103/175 (58.86%), Query Frame = 0


Query: 47  DGDDDPKSAAAAATNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFP 106
           D D+D   + +  ++S      S S   S S + S+  +  +DD++E   N+        
Sbjct: 282 DSDEDSDDSDSDESDSDDSDSDSDSDSDSDSDSDSSEGEGNDDDDDESTFNL-------- 341

Query: 107 SSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVV 166
           S     +  +M  ++  F+E+Q +R+E ++R+ FQ+AN+K+++ S+  +  ++    IV+
Sbjct: 342 SEMQVRENTQMNTLIKHFSEDQQTRFEYYKRSSFQRANIKKVMQSVL-SAPVNQTSAIVM 401

Query: 167 SGIAKMFVGELVESARVVMAERNDSGPIRPCHLREAYRRSKLEGKIP--RKSVPR 220
            GIAK+FVGE+VE AR +M E  ++GPIRP H+REAYRR K    IP  +KSVP+
Sbjct: 402 GGIAKVFVGEIVELARSIMEEWRETGPIRPRHIREAYRRLKESNSIPYYKKSVPK 447

[Close]

BLAST of Sed0011196 vs. ExPASy Swiss-Prot
Match: Q5RA91 (Transcription initiation factor TFIID subunit 11 OS=Pongo abelii OX=9601 GN=TAF11 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.4e-17
Identity = 75/209 (35.89%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 9   EAAFEEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPKSAAAAATNSGIPSGP 68
           E    ++  + P  P A D   I  +            DGD D     AAA    + S  
Sbjct: 14  ETGESDETAAAPGDPGATDTDGIPEDT-----------DGDADADLKEAAAEEGELKSQD 73

Query: 69  STSMFV----SSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQF 128
            + +       SS    AA K K D +E++E+  +V         D D++ KMQ ++S F
Sbjct: 74  ISDLTTVEREDSSLLTPAAKKLKIDTKEKKEKKQKV---------DEDEIQKMQILVSSF 133

Query: 129 TEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVESARVV 188
           +EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V
Sbjct: 134 SEEQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDV 193

Query: 189 MAERNDSGPIRPCHLREAYRRSKLEGKIP 214
             +  +  P++P H+REA RR K +G+IP
Sbjct: 194 CEKWGEMPPLQPKHMREAVRRLKSKGQIP 201

[Close]

BLAST of Sed0011196 vs. ExPASy TrEMBL
Match: A0A6J1FLN4 (transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC111446328 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101
Identity = 210/223 (94.17%), Postives = 215/223 (96.41%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATA-ADALDLHDGDDDPKSAAAAA 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AAT  ADALDLHDGDD+PKSAAAAA
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAA 60

Query: 61  TNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           TNSGIPS  +TS+FVSSSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 SARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           +ARVVM ERNDSG IRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

[Close]

BLAST of Sed0011196 vs. ExPASy TrEMBL
Match: A0A6J1KZI1 (transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111498496 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.3e-100
Identity = 208/224 (92.86%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATA-ADALDLHDGDDDPK-SAAAA 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AATA ADA+DLHDGDDDPK +AAAA
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAA 60

Query: 61  ATNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQ 120
           ATNSG+PS  +TS+FVSSSSN+SAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQ
Sbjct: 61  ATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQ 120

Query: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180
           AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV
Sbjct: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180

Query: 181 ESARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           E+ARVVM ERNDSG IRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 ETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 224

[Close]

BLAST of Sed0011196 vs. ExPASy TrEMBL
Match: A0A6J1DFN0 (transcription initiation factor TFIID subunit 11 OS=Momordica charantia OX=3673 GN=LOC111020384 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 205/226 (90.71%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPK----SAA 60
           MKQSKDPFEAAFEEQEESPPNSPSAAD +EIQTN A  A+DALD HDGDDDPK    +AA
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADVVEIQTNVA--ASDALDSHDGDDDPKAATAAAA 60

Query: 61  AAATNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAK 120
           A AT+SGIPS P+TSMFVSSSSNVSAAPKTK+DDEEEEEENVEVELAKFPSSGDPDKMAK
Sbjct: 61  AVATHSGIPSAPTTSMFVSSSSNVSAAPKTKDDDEEEEEENVEVELAKFPSSGDPDKMAK 120

Query: 121 MQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGE 180
           MQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGE
Sbjct: 121 MQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGE 180

Query: 181 LVESARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           LVE+ARVVM ERND+GPIRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 LVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 224

[Close]

BLAST of Sed0011196 vs. ExPASy TrEMBL
Match: A0A5D3D798 (Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001040 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93
Identity = 200/222 (90.09%), Postives = 205/222 (92.34%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPKSAAAAAT 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T  A   ADA DL DGDDDPKS A+ AT
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKS-ASVAT 60

Query: 61  NSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAI 120
           +S  P   +TSMFVSSSS+VSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAI
Sbjct: 61  HSVTPVS-TTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAI 120

Query: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVES 180
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE+
Sbjct: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 180

Query: 181 ARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           ARVVM ERNDSGPIRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 ARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]

BLAST of Sed0011196 vs. ExPASy TrEMBL
Match: A0A0A0L5S4 (TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.3e-93
Identity = 198/222 (89.19%), Postives = 206/222 (92.79%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPKSAAAAAT 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T  A + ADA DL DGDDDPKS A+ AT
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKS-ASVAT 60

Query: 61  NSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAI 120
           +S  P+  +TSMFVSSSS+VS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAI
Sbjct: 61  HSVAPAS-TTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAI 120

Query: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVES 180
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE+
Sbjct: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 180

Query: 181 ARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           ARVVM ERND+GPIRPCHLREAYRR KLEGKIPRKSVPRLFR
Sbjct: 181 ARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]

BLAST of Sed0011196 vs. TAIR 10
Match: AT4G20280.1 (TBP-associated factor 11 )

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-54
Identity = 127/223 (56.95%), Postives = 155/223 (69.51%), Query Frame = 0


Query: 1   MKQSKDPFEAAF-EEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPKSAAAAA 60
           MK SKDPFEAA  EEQEESPP SP         +       D     D D+ P       
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEID--QTQDEDERPVDVRRPM 60

Query: 61  TNSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
             +       TS+ V+ + N     K K++D+EEEEEN++VEL K+P+S DP KMAKMQ 
Sbjct: 61  KKA------KTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQT 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVE
Sbjct: 121 ILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVE 180

Query: 181 SARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           +ARVVMAER +SGPIRPCH+RE+YRR KLEGK+P++SVPRLFR
Sbjct: 181 TARVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

[Close]

BLAST of Sed0011196 vs. TAIR 10
Match: AT1G20000.1 (TBP-associated factor 11B )

HSP 1 Score: 156.4 bits (394), Expect = 2.7e-38
Identity = 106/223 (47.53%), Postives = 130/223 (58.30%), Query Frame = 0


Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAATAADALDLHDGDDDPKSAAAAAT 60
           MK SKDPFEAA EEQEESP           ++T             +GD+          
Sbjct: 32  MKHSKDPFEAAMEEQEESP-----------VETEQTL---------EGDE---------- 91

Query: 61  NSGIPSGPSTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA-KMQA 120
                                A  K K     E +   EVE  K  +  DP   A KMQ 
Sbjct: 92  --------------------RAVKKCKTSVVAEAKNKDEVEFTKNITGADPVTRANKMQK 151

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVE
Sbjct: 152 ILSQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVE 204

Query: 181 SARVVMAERNDSGPIRPCHLREAYRRSKLEGKIPRKSVPRLFR 223
           +ARVVM ER +SGPIRPCH+RE+YRR KL+GK+P++SV RLFR
Sbjct: 212 TARVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

The following BLAST results are available for this feature:

BLAST of Sed0011196 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028341.1	1.2e-101	94.62	Transcription initiation factor TFIID subunit 11 [Cucurbita argyrosperma subsp. ...	[more]
XP_022940909.1	3.6e-101	94.17	transcription initiation factor TFIID subunit 11 [Cucurbita moschata]	[more]
KAG6596814.1	6.1e-101	94.17	Transcription initiation factor TFIID subunit 11, partial [Cucurbita argyrosperm...	[more]
XP_023538856.1	4.0e-100	93.78	transcription initiation factor TFIID subunit 11 [Cucurbita pepo subsp. pepo]	[more]
XP_023005534.1	6.8e-100	92.86	transcription initiation factor TFIID subunit 11 [Cucurbita maxima]	[more]

BLAST of Sed0011196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M565	2.9e-53	56.95	Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702...	[more]
F4HR03	3.8e-37	47.53	Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=370...	[more]
Q99JX1	4.0e-18	39.89	Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf...	[more]
Q54XM9	4.4e-17	35.43	Transcription initiation factor TFIID subunit 11 OS=Dictyostelium discoideum OX=...	[more]
Q5RA91	4.4e-17	35.89	Transcription initiation factor TFIID subunit 11 OS=Pongo abelii OX=9601 GN=TAF1...	[more]

BLAST of Sed0011196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLN4	1.7e-101	94.17	transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KZI1	3.3e-100	92.86	transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1DFN0	1.2e-97	90.71	transcription initiation factor TFIID subunit 11 OS=Momordica charantia OX=3673 ...	[more]
A0A5D3D798	1.0e-93	90.09	Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0L5S4	2.3e-93	89.19	TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=...	[more]

BLAST of Sed0011196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20280.1	2.1e-54	56.95	TBP-associated factor 11	[more]
AT1G20000.1	2.7e-38	47.53	TBP-associated factor 11B	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006809	TAFII28-like protein domain	PFAM	PF04719	TAFII28	coord: 120..205 e-value: 6.2E-32 score: 109.5
IPR006809	TAFII28-like protein domain	CDD	cd08048	TAF11	coord: 124..207 e-value: 3.39698E-39 score: 128.453
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 124..213 e-value: 3.2E-31 score: 109.3
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 124..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..83
None	No IPR available	PANTHER	PTHR13218:SF21	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11B	coord: 1..222
IPR045127	Transcription initiation factor TFIID subunit 11-like	PANTHER	PTHR13218	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED	coord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011196.1	Sed0011196.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0051123	RNA polymerase II preinitiation complex assembly
biological_process	GO:0006413	translational initiation
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
cellular_component	GO:0005669	transcription factor TFIID complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003713	transcription coactivator activity
molecular_function	GO:0003743	translation initiation factor activity