Sed0011178 (gene) Chayote v1

Overview
NameSed0011178
Typegene
OrganismSechium edule (Chayote v1)
Descriptionpre-mRNA-splicing factor CWC25-like isoform X2
LocationLG13: 2872501 .. 2877623 (+)
RNA-Seq ExpressionSed0011178
SyntenySed0011178
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTAATAAAAAAAAAATAATAAATGGAGTATGGTGGACAACATTATATGAGTTCTTCTCCTTCCCGTAAGACGAAGCCCTAAGTTTCCCACTCTGTGCTTTTCACTTCCTTCGGTTCACACAAACTCCGGCGACCCAATGTCGCGTCGTGAACCTCGAGAATCCGATTCCAGGCGCTACCGTTCCAGATTCGACAGAGATTCCAGGTATCTCTTTCCGATTGCATTCCTTTATTCGCTGCTGAAGAATTTCTTCGTTTTCAATGTGTTTTCCTTGCCTTATCGGACGATTCCGGAATTTCCATGTTTTTTTGTTCAGATATGATTGAGTATTGCCGTGTGTGTTATTTTGTTGTTTGATGTTTTTGTAATCCGGAGGAACACTTGTCGTAGGCTCGTTTGATGAACATTTGGTTTTTGATTTTTGTAATTTAGGTTTTAGGGTTTAGCTCTGCGGATGGATGAACGTAATTGTCAAATCACTTCTTGTCTGTCTCTTGGGTTCGGGCTTTGAGACGGGGGCTCCTGTTCTTGGGTAAAGTGGAGTGAAGCTCCAATTTCTGTCCCCAAAAAAAACAAAAAAATAACTAAAATTTGAAAACTAATAAATGTAGCTTTTAGAAATTTGTTTTGGTTTTTGCAATTGATTATGATTGAACTACTTTCTTAAGTGGAGATAAACCCTTTGTAAAGAATTTGAGTAAAAACAAGCTTAAATTGTAAAAAAACTAAAAACAAAAGACCAAATGGTTATGGGATGGGGTCTTAGCTTTGTGATTCTTTCTTGTTCGGTTATGTTCCTTCATTTTTGTTCAATTTGTTATGTTTATTGATACGCGGTTTGTTGATGTGATAAGTTTAAATGGGTCTCAAGGAATTGGGTTTTATAGGGCTCTTTTGTATCTGGAGTTTGTTTTGAAGATGGAATCAAAATGTACTAATTCTCTCTGTATCATGTATGTTTGTTGGACTGTCTTTGAGCCGTGCTCTAGTATTTTCTCACGAGTGACATGATGTGAGAAGTGTTTTTCTTATAAAAGTTTGTAAATTTGAGCTGTAAATAGTATTAGTTTCACTAGTTCGTTTGTATGGAAGGAGAGGACGAGTAGTTCATTCTTGATTTTTTTTTCGAAGATGACATTGTAATTTACAATTTCCCAGCTTATGTTGATTGGACTCCCTGCATCATTGCTTGGTCCATCATTTTCTCGCTAGTGATGTGAGATTGTTGATGAAAAAAACTGTGAATTTGGGATCAATAAATGTATTATAAAAGTTTTATGCTTGTTATTAGCTAGGAAGAAGCTGATAGAACTTGAAAATAATAGACAACTAATTTACAAGATAAACCAAGACCCTCCCTCCTGAGAACTCTCTCCCCTATCTTCTTCAATCTCCACTCCCTCTATTTATAACCATAATGGCCTGACCAACTCCCTAACTATTTACTAATCTACCCATCAATAACATTCGTATCATTATCCACCCCTTAAACACACCTTGTCCTTCAAGCGTGTGTAAGAAAATGAAAATTTGAGGTTGTAAATCCACATAAACCAGCTCACGCTTTGATATTTCCTTTTTTTATTTCCATGTTTATTGATATGATATGTGCTTGACTGCTCCCATGTATTTTGAAGTGCTTAGACTGTGAAGCTTATGCCAATTTGTAGTTGAAGCAGTCGATTGTGAATGTTTGAGTGAAAATTGTACTTTGGCCAATCGATTTTGAAACACATTCCTTTGGTAGTTTCTTTTATCCAATCAAATGAGAAATATGTTGCTTGCATGGTTATATTTCTCGTTTCCAGCTACAAAGATCATGTATTTTGATTGTTACCAAAGAAACGATCGGACAGTTACTTTTGCCATGCTCAGTCTCATAGTTGCCTGTGTATTACTTCTAGTTTCTAATTACTTCATGGTTATTTATGGCTACTTGGTAGCATATCCTTGTCAGCCCTGCATTATGCCAATTATATGTCCCCTTGTTTGAAAATAGTAAAAGAATATTATGTTTTGCTGTCTTGCTTAGTCATAAGCGAGGTCTCTGAAGAGAAATACATGATCTTATTTTTGGATATTGCATCAATAAGATGGCTCCATTGTTTTTCTTTCAATTGAATTCAAATAATATGTCAGGTTGAATAAGCGATTATTACATTACGTGTAGTCTGATGATAGTATACTTAATCATGAAACTCTAATGTGACTTATTGTTTCTAGTCCGAAGAGGTCAAGGAGGGACAAGAAATCATTCGAGGAGAAGTTAACTAGAAACTCTAGTTCTCATGGCGAAGATAATAAAGAACGTGATAAAAAACATGAGCTACGACATGAGGGGAAAGATATTATACCCCATGAGTCTTCACTAGCACTTGATTCTAATCCAGAAGGTGGGATTAGAAAAGGAGCAAACAAGAACAGTGATGGGAGGGATGGAGAGACTAAACATTCATTAAATCCCAGTGAAGTACCACGTTCACGATCTAATCTTCAGGTTTGAGCTACATTAAAGCATTTTTCAATTAATTATGATAATTTCTTTCTTGTATAGTTTCTTAAAAATAAAATAACAGGAATCTAGTTTGGTTGTTCTCATCCATGATTTAACCAATTTTAATTGCGATCTTAAGAGCTATTGGTAACCAGCATCTCAAAGCTCATTATCTATACCCAATGCCCATTACCATTCTTTAATTTTCATCTCAACTTCCAAGTTAGTAATAAGATTGGAAGCGTCAAAATTTTTCTGTAATTACATCATTCGTTGCTTTTCATATGAACTATCAAAGTGGGTGTGCTGCAAGATCTGGACGTAAATGAATTCGTGTGGGGGATTTCCTTTGAATTTGATGGAATCCATAACCTGCGTTATATTTCATACAAATATATAGGATACAAGGTAATGGCAGTCAAATGTTTTTTTCTTTGTTTTTTAAATTTTTTTTTAAAGTGATTTAGGCATTTGAAGTGGGTCGCCTCAGTGAGGTGCAAGGCCTGGTGCTTCAACGATACTCTGCACACTTTATAACGATGTTGTAACATTGTTTGTTGGCTAATAGCATAGCTAACAAGAGCTATAGCTCAGTGCAGAATATGTGCCTATAAACTAAGAGGTCATGGGTTCGAATCTTCCACCTTCAGTCGTTGAACTAAAAAAACATCCTTTGATGGCTTATGAAGGATATGTTGTTAGGTCAAATAAGTACTACAATATTTTTTTGTTGAATTAAATAAAAAGTACTACTATATTTTTTTACAATCTTTATATTGGATAGTTGTGGAATTTCATCATCCGTATCGATAAAATTAAGTATTTAGCTAAGTAATAATTCTCTATTTCTCTATCCTCTATCCTCTACTCTATACCCCTCCTGCCTTTTTCATTCTTTGTTGCAATTTAAATTACCCCACATTTTTGCTGGGCTGATGTAATTGGAATCTTGTTCAGCCATGTGCCTTCAAGTGCATCCGTGTATATAACTTCTTAGGCTTGCCTGTGCATGTCTTATAACAGCACGATGAACGTGGTAATGACGGGCCAGTTGGTCGAAGCTTTGGTCGGAGCACAACTAGTGGTGGGTTTCCTTACTCTCTTTTAAGCCTCAATTCCAACTTTTTTTATGAGATTTTTTTCTTTTTCTCTTTGCAACGTCATGTGTATAATATAACATCGTTTGGTATATTCCTTGTAACATTACTAACAATACCTATTACGCATGCATTATTATTCTTATTATATTCACTCTCAATTCTTAATATTTGTACCTGTTTGTTCCCCGACACTCATGGATTAGTGGTAATGGAGTGAGAGAAACTATTGAAGTTTTATATGGTGTACTTTTGGATTTCATCTTAAATGGATAGGGAATTGGAAAGAAATCCTACTACAATTAGTTTCTTCTGGTGCCAAAAAGGCTATAGTATACTGTTGTAGAGGATGCGTTCTTATTTTCACATTGTTGCCAAAATGTTTTTTATATACAATCTTGTAGATGTCACGTTCATATTTAGACTTATATTGTGAAATGTCTTGCACGGGATAATTTATATTTTTTTATACTTTTTGGGCTAGCTTATGTACACCTCGACTATTATCACGGGACATATCACTTGATCCTACAACCCCTATGTTAATTTAAAATCTGTACCTTTCTATTCGTGCTTCTCTTCTCATGATTTAGTGTTTGTTTTCTTCTTTTCTTTTTTAGAGCGAGGTTGGTGGAAGGATTCAAAGGATCAGGATAAGGATAGGTCATCTGGAAAGACGACAACTCACAATTCACAGCGAAGAGATGAGATACCAAAAAGCATGAGGGAGGATAATCACACAAGAAACCGCGACGGGTCCTCGAAACTAGAGGTTGATGCACCACCTCCTGCTCGGAGACGACCTGCATTTAGGGAGAAGAAGGTTATAGCTGACAGTGAAAATGTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAATTGAGTGATCCACACAACCAACCTCAGGATGGAAGGGAACGAAGGGAAGAAAGAGGCCGCGACACCCGTTATTCCGAGAAACTTAACAAGCATTTCACTAGAGACATGGCCATTAAAAGAGATGAGATGAAGGGCGGTGGCAGCTACCCGGTGAGGGAAAGGTATGGCAATGGGAGTGGCAGCGGGGATTACAGGGGAAGAGACAGCTTCGGTGGGAGGCAAGGATTTCGAGCTGGTGGTGGTACCCGTGTAGAGAAATGGAAGCATGACCTGTTTCACGAGGCTAACCGGAGTCCAACCCCAAAGAACGAAGAGGACCAAATTGCCAAGGTTGAAGCTCTTCTTGCTTCTTAGGATATAATAATATCTAGCATCTGATTTTGTTGAGTCTTTGGTGAAATGCATTGACAAAAATATTGAAGCATTTGAAATGATTCAGCTTGTGTTTTTTTGCTTCTTAAACATCGTCTCTTATTTGTTCTTTTGCTTGTTACATCTCGATGTAATTGAATTGTCGAATTGTCGAATTGTCTCATGTTATCAAACACAAACTAATGTATTTCATGAGAGCTTCAGTTGTCGATCATGAACTAATGATTTTTTTTTTTTAATTTTAAAATAAGGGTTACAACGTCCCGTTTCTATCAAAA

mRNA sequence

TGTTAATAAAAAAAAAATAATAAATGGAGTATGGTGGACAACATTATATGAGTTCTTCTCCTTCCCGTAAGACGAAGCCCTAAGTTTCCCACTCTGTGCTTTTCACTTCCTTCGGTTCACACAAACTCCGGCGACCCAATGTCGCGTCGTGAACCTCGAGAATCCGATTCCAGGCGCTACCGTTCCAGATTCGACAGAGATTCCAGTCCGAAGAGGTCAAGGAGGGACAAGAAATCATTCGAGGAGAAGTTAACTAGAAACTCTAGTTCTCATGGCGAAGATAATAAAGAACGTGATAAAAAACATGAGCTACGACATGAGGGGAAAGATATTATACCCCATGAGTCTTCACTAGCACTTGATTCTAATCCAGAAGGTGGGATTAGAAAAGGAGCAAACAAGAACAGTGATGGGAGGGATGGAGAGACTAAACATTCATTAAATCCCAGTGAAGTACCACGTTCACGATCTAATCTTCAGCACGATGAACGTGGTAATGACGGGCCAGTTGGTCGAAGCTTTGGTCGGAGCACAACTAGTGAGCGAGGTTGGTGGAAGGATTCAAAGGATCAGGATAAGGATAGGTCATCTGGAAAGACGACAACTCACAATTCACAGCGAAGAGATGAGATACCAAAAAGCATGAGGGAGGATAATCACACAAGAAACCGCGACGGGTCCTCGAAACTAGAGGTTGATGCACCACCTCCTGCTCGGAGACGACCTGCATTTAGGGAGAAGAAGGTTATAGCTGACAGTGAAAATGTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAATTGAGTGATCCACACAACCAACCTCAGGATGGAAGGGAACGAAGGGAAGAAAGAGGCCGCGACACCCGTTATTCCGAGAAACTTAACAAGCATTTCACTAGAGACATGGCCATTAAAAGAGATGAGATGAAGGGCGGTGGCAGCTACCCGGTGAGGGAAAGGTATGGCAATGGGAGTGGCAGCGGGGATTACAGGGGAAGAGACAGCTTCGGTGGGAGGCAAGGATTTCGAGCTGGTGGTGGTACCCGTGTAGAGAAATGGAAGCATGACCTGTTTCACGAGGCTAACCGGAGTCCAACCCCAAAGAACGAAGAGGACCAAATTGCCAAGGTTGAAGCTCTTCTTGCTTCTTAGGATATAATAATATCTAGCATCTGATTTTGTTGAGTCTTTGGTGAAATGCATTGACAAAAATATTGAAGCATTTGAAATGATTCAGCTTGTGTTTTTTTGCTTCTTAAACATCGTCTCTTATTTGTTCTTTTGCTTGTTACATCTCGATGTAATTGAATTGTCGAATTGTCGAATTGTCTCATGTTATCAAACACAAACTAATGTATTTCATGAGAGCTTCAGTTGTCGATCATGAACTAATGATTTTTTTTTTTTAATTTTAAAATAAGGGTTACAACGTCCCGTTTCTATCAAAA

Coding sequence (CDS)

ATGTCGCGTCGTGAACCTCGAGAATCCGATTCCAGGCGCTACCGTTCCAGATTCGACAGAGATTCCAGTCCGAAGAGGTCAAGGAGGGACAAGAAATCATTCGAGGAGAAGTTAACTAGAAACTCTAGTTCTCATGGCGAAGATAATAAAGAACGTGATAAAAAACATGAGCTACGACATGAGGGGAAAGATATTATACCCCATGAGTCTTCACTAGCACTTGATTCTAATCCAGAAGGTGGGATTAGAAAAGGAGCAAACAAGAACAGTGATGGGAGGGATGGAGAGACTAAACATTCATTAAATCCCAGTGAAGTACCACGTTCACGATCTAATCTTCAGCACGATGAACGTGGTAATGACGGGCCAGTTGGTCGAAGCTTTGGTCGGAGCACAACTAGTGAGCGAGGTTGGTGGAAGGATTCAAAGGATCAGGATAAGGATAGGTCATCTGGAAAGACGACAACTCACAATTCACAGCGAAGAGATGAGATACCAAAAAGCATGAGGGAGGATAATCACACAAGAAACCGCGACGGGTCCTCGAAACTAGAGGTTGATGCACCACCTCCTGCTCGGAGACGACCTGCATTTAGGGAGAAGAAGGTTATAGCTGACAGTGAAAATGTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAATTGAGTGATCCACACAACCAACCTCAGGATGGAAGGGAACGAAGGGAAGAAAGAGGCCGCGACACCCGTTATTCCGAGAAACTTAACAAGCATTTCACTAGAGACATGGCCATTAAAAGAGATGAGATGAAGGGCGGTGGCAGCTACCCGGTGAGGGAAAGGTATGGCAATGGGAGTGGCAGCGGGGATTACAGGGGAAGAGACAGCTTCGGTGGGAGGCAAGGATTTCGAGCTGGTGGTGGTACCCGTGTAGAGAAATGGAAGCATGACCTGTTTCACGAGGCTAACCGGAGTCCAACCCCAAAGAACGAAGAGGACCAAATTGCCAAGGTTGAAGCTCTTCTTGCTTCTTAG

Protein sequence

MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRHEGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGNDGPVGRSFGRSTTSERGWWKDSKDQDKDRSSGKTTTHNSQRRDEIPKSMREDNHTRNRDGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREERGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFRAGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Homology
BLAST of Sed0011178 vs. NCBI nr
Match: XP_023548006.1 (pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503.4 bits (1295), Expect = 1.5e-138
Identity = 272/340 (80.00%), Postives = 304/340 (89.41%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+RYRSRFDR+ SPKRSRRD+K  EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D+ PHESSLALDS+PEGG+ KGAN+NSD R+G TK SLNP+EVPRSRS  QHD+RG+
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKKLSDPH QPQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPH-QPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK GG Y VRERYGNG G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRGG-YSVRERYGNGGGGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

BLAST of Sed0011178 vs. NCBI nr
Match: XP_023521659.1 (pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.0 bits (1286), Expect = 1.6e-137
Identity = 271/340 (79.71%), Postives = 304/340 (89.41%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS R+RSRFD +SSPKRSRRD+K+ EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREIRESDSNRHRSRFDGESSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D+ PHESSLALDS+PEGG+ KGAN+NSD R+G TK SLNP+EVPRSRS  QHD+RG+
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKKLSDPH QPQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPH-QPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK GG Y VRERYGNG G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRGG-YSVRERYGNGGGGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

BLAST of Sed0011178 vs. NCBI nr
Match: XP_022942670.1 (pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_022942671.1 pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 498.0 bits (1281), Expect = 6.2e-137
Identity = 270/340 (79.41%), Postives = 302/340 (88.82%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+RYRSRFD++ SPKRSRRD+K  EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D  PHESSLALDS+PEGG+ KGAN+NSD R+G TK SLNP+EVPRSRS  QHD+RG+
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKK SDPH QPQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPH-QPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK GG Y VRERYGNG G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRGG-YSVRERYGNGGGGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

BLAST of Sed0011178 vs. NCBI nr
Match: XP_022984546.1 (pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima])

HSP 1 Score: 496.9 bits (1278), Expect = 1.4e-136
Identity = 269/340 (79.12%), Postives = 302/340 (88.82%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+RYRSRFDR+ SPKRSRRD+K  EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D+ PHESSLALDS+PEGG+ KGAN+NSD R+G TK +LNP+EVPRSRS  QHD+RG+
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKKLSDPH  PQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPH-PPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK GG Y VRERYGNG G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRGG-YSVRERYGNGGGGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEAQIAKVEALLAS 338

BLAST of Sed0011178 vs. NCBI nr
Match: KAG6600285.1 (hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030943.1 hypothetical protein SDJN02_04980 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.5 bits (1277), Expect = 1.8e-136
Identity = 269/340 (79.12%), Postives = 301/340 (88.53%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+RYRSRFD++ SPKRSRRD+K  EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D  PHESSLALDS+PEGG+ KGAN+NSD R+G TK SLNP+E PRSRS  QHD+RG+
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKK SDPH QPQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPH-QPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK GG Y VRERYGNG G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRGG-YSVRERYGNGGGGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

BLAST of Sed0011178 vs. ExPASy TrEMBL
Match: A0A6J1FPJ0 (pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.0e-137
Identity = 270/340 (79.41%), Postives = 302/340 (88.82%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+RYRSRFD++ SPKRSRRD+K  EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D  PHESSLALDS+PEGG+ KGAN+NSD R+G TK SLNP+EVPRSRS  QHD+RG+
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKK SDPH QPQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPH-QPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK GG Y VRERYGNG G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRGG-YSVRERYGNGGGGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

BLAST of Sed0011178 vs. ExPASy TrEMBL
Match: A0A6J1J5K1 (pre-mRNA-splicing factor CWC25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482807 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 6.7e-137
Identity = 269/340 (79.12%), Postives = 302/340 (88.82%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+RYRSRFDR+ SPKRSRRD+K  EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D+ PHESSLALDS+PEGG+ KGAN+NSD R+G TK +LNP+EVPRSRS  QHD+RG+
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKKLSDPH  PQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPH-PPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK GG Y VRERYGNG G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRGG-YSVRERYGNGGGGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEAQIAKVEALLAS 338

BLAST of Sed0011178 vs. ExPASy TrEMBL
Match: A0A6J1FQX4 (pre-mRNA-splicing factor CWC25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 1.0e-129
Identity = 260/340 (76.47%), Postives = 292/340 (85.88%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+RYRSRFD++ SPKRSRRD+K  EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D  PHESSLALDS+PEGG+ KGAN+NSD R+G TK SLNP+EVPRSRS  QHD+RG+
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKK SDPH QPQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPH-QPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK G             G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRG-------------GGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 326

BLAST of Sed0011178 vs. ExPASy TrEMBL
Match: A0A6J1JAV5 (pre-mRNA-splicing factor CWC25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482807 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 2.3e-129
Identity = 259/340 (76.18%), Postives = 292/340 (85.88%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+RYRSRFDR+ SPKRSRRD+K  EEKL+RNSSSH EDNK+RD+KHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
           EG+D+ PHESSLALDS+PEGG+ KGAN+NSD R+G TK +LNP+EVPRSRS  QHD+RG+
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGS 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS++S RGWWKDSK+QDK  DR+SGKT T+NSQRRDEIP++++EDNHTR R
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVD+  PAR+RPAFREKK+  D+EN EKAGMASESKKLSDPH  PQDGRERREE
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPH-PPQDGRERREE 240

Query: 241 RGRDTRYSEKLNKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 300
           RGRDTRYS+KL+KH T DMA KRDEMK G             G G+YRGRD FGGRQG+ 
Sbjct: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRG-------------GGGNYRGRDRFGGRQGYP 300

Query: 301 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           A GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Sbjct: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEAQIAKVEALLAS 326

BLAST of Sed0011178 vs. ExPASy TrEMBL
Match: A0A0A0KV12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.4e-121
Identity = 256/341 (75.07%), Postives = 285/341 (83.58%), Query Frame = 0

Query: 1   MSRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGEDNKERDKKHELRH 60
           MSRRE RESDS+R+RSRFDR+ SPKRS+RD+K+ EEKL+RNSSSH EDNKERD+KHELR 
Sbjct: 1   MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRL 60

Query: 61  EGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERGN 120
            G+D+IPHESSLAL+S PEGG   GAN+NSDGRDG TKHS+NP+EVPRSRS  QHDER N
Sbjct: 61  VGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSN 120

Query: 121 DGPVGRSFGRSTTSERGWWKDSKDQDK--DRSSGKTTTHNSQRRDEIPKSMREDNHTRNR 180
            G VGRSFGRS TSERGWWKDSKD DK  DR+SGK+ T+ SQ+RDE P++ RED H    
Sbjct: 121 AGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRH---H 180

Query: 181 DGSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREE 240
           DGSSKLEVDA  PAR+RPAFREKK+  D+E+ EK  M  ESKK +D H Q Q+GRERREE
Sbjct: 181 DGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSNDLH-QIQEGRERREE 240

Query: 241 RGRDTRYSEKL-NKHFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGF 300
           RGRD RYSEKL NKH   DMA KRDEMK  G YPVRERYGNGSG G+YRGRD FGGRQG+
Sbjct: 241 RGRDPRYSEKLNNKHSNGDMASKRDEMKRVG-YPVRERYGNGSGGGNYRGRDRFGGRQGY 300

Query: 301 RAGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           R   GTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALL+S
Sbjct: 301 RT-SGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 335

BLAST of Sed0011178 vs. TAIR 10
Match: AT3G19650.1 (cyclin-related )

HSP 1 Score: 125.9 bits (315), Expect = 6.0e-29
Identity = 125/340 (36.76%), Postives = 172/340 (50.59%), Query Frame = 0

Query: 2   SRREPRESDSRRYRSRFDRDSSPKRSRRDKKSFEEKLTRNSSSHGED--NKERDKKHELR 61
           +RRE R+SD RR+RSR DR+ SPKRSRRD K   E++         D  + E++ +  LR
Sbjct: 3   TRRESRDSDPRRHRSRIDREPSPKRSRRDGKPEAERVLSKKDLDVRDGTDTEKNSRQSLR 62

Query: 62  HEGKDIIPHESSLALDSNPEGGIRKGANKNSDGRDGETKHSLNPSEVPRSRSNLQHDERG 121
                    ++ L LD++   G RK + K   G    TK + + S+VPRSR   QHD+R 
Sbjct: 63  ---------DAPLELDAH---GSRKDSEKKHSGHHETTKAAPHLSQVPRSRPYSQHDDRR 122

Query: 122 NDGPVGRSFGRSTTSERGWWKDSKDQDKDRSSGKTTTHNSQRRDEIPKSMREDNHTRNRD 181
           +DG V     R  TS RG W+ S+DQ   R+     + +  R+DE   S R D    + D
Sbjct: 123 SDGKV----DRRPTSVRGSWRSSRDQSNRRAGDDEKSQH--RKDEDKSSWRHDRFRESDD 182

Query: 182 GSSKLEVDAPPPARRRPAFREKKVIADSENVEKAGMASESKKLSDPHNQPQDGRERREER 241
               L       +R+RPAFREKK+       E+ G  ++  +  D  +   + R + E  
Sbjct: 183 TQGAL-------SRKRPAFREKKI------AEETGNNTDRTRTEDGKDTNLNNRRQNERN 242

Query: 242 GRDTRYSEKLNK-HFTRDMAIKRDEMKGGGSYPVRERYGNGSGSGDYRGRDSFGGRQGFR 301
            R   +SE+  +    RD    RD+ +G GS   R+ Y       D R R +  GR GF 
Sbjct: 243 WRSNTHSERHERPAMGRDRVWNRDDERGAGS---RQSY-----QAD-RDRFNGNGRSGFS 302

Query: 302 AGGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
                  +KW HDLF EAN+SP    EE+QIAKVEALLAS
Sbjct: 303 GSWTRNEKKWDHDLFDEANKSPAKATEEEQIAKVEALLAS 302

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023548006.11.5e-13880.00pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1... [more]
XP_023521659.11.6e-13779.71pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo][more]
XP_022942670.16.2e-13779.41pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_02294267... [more]
XP_022984546.11.4e-13679.12pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima][more]
KAG6600285.11.8e-13679.12hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FPJ03.0e-13779.41pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1J5K16.7e-13779.12pre-mRNA-splicing factor CWC25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1FQX41.0e-12976.47pre-mRNA-splicing factor CWC25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1JAV52.3e-12976.18pre-mRNA-splicing factor CWC25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A0A0KV121.4e-12175.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G19650.16.0e-2936.76cyclin-related [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103
NoneNo IPR availablePANTHERPTHR36364OS03G0203000 PROTEINcoord: 1..338

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0011178.1Sed0011178.1mRNA