Sed0011113 (gene) Chayote v1

Overview


Name	Sed0011113
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LOB domain-containing protein
Location	LG03: 759494 .. 762064 (+)
RNA-Seq Expression	Sed0011113
Synteny	Sed0011113

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTGCCTTAGGTTTTTGCAGGCCCCCCTTTTCTCTCTTTCTCTTAATTCTCCTCTCTTTTTTTCTAGGGTTTCTAATTCCCTTTTATTTCCTCATTTCTTTTTAAAAAAATACATATTATTTTTATGTATCTCTCTCATCTCTTTCAAACAAGCATCTCAAAAGGTAACCCCCTAATTTCTAACTTTGATCCTTTATTATTATTGCTTAACAAGACCAAGAATTGGTAGATCTTCTTAATGATTTTATTTTTGTTTGCTTAATTTTTAACTATTTCTGGAATTGATGATATATATATATATATTTTTTGAAGATGGATTAAAAAATGAGACTTCTAGTGATATGATATACAATGGGCTGGTAGCTAAGGGTTTACATTGAATGCATGAATTTGTTTCATAATTAAATAATAGGCCATCAATTGGGTAGCAATTATTCTGTTTATTAAATTTTAAGGATTTATATATGTTTTTTTTCCTTTAATGATGCAAGGATTTATATATTTTAGTACAAAGGAAGGTGGAATTTTTAATGTTTCAGCTGCAGAAATAGTAATGTTGGTGTGCTCTGTGCAGTGAAGAGAGATTCAATTCAGACAATTTGAATTATTAATTGTTTTAGGTGGATAGTATAGATTAATGATTTTAATTTTTTTTTTTCTTAAAAGAGTTTAATGGAAGTAAGGAGAGGGAAAGTAGTTCGTTTGACGATAAAGTTATTTAATATGGTTTATAATAATTATTGTCAATGTGACTTATATTATAAATGTATGGATCAGAGAATTAAATTAAATGCGTTTTTCACCCATGTATTTATTGATTTACAGTAGCTGTGATCAAATTATGAGGAGAGTAGATATTATAAAACTTTCCTTGTGAAGTAAGAAAATTTTATTAATTATGAGGAGAGTAGATAATGAATTAAAAGGAAACGACATAAATTAATTACTTATCAATCTAAGAAACGCTAAAAAAAAGGGGGAAAAAAGCTATTTATTTAGTTTTCTTTTAGGATTGTTAGAATTTTAATATGAGATATTTAAATATAAAATACTACCAAGATAATAGATAATTTATTTAAGTGAGGTTTAAATATATAATTAAAATCAATTCCATTTTGCGGATCAAAAAAAAAAAAAAAGAAAAAAAGAAAAATCAATTCCATTTAGGAAATGGTAATCGATGGCTTTAGTCTCTATAAATATACCATTTAGATTGAGTCAATTCCCTAAAGAAACCTCCTATTGAGCAATCGATATTTATTCAAGTCATAGCAAAAAATACTTTCGAGAGGAAATTCAAGATTCGTTGACTGGGACGTGGTGTAAAGAAACTCCGAACTTATTCACAGCCAATACTTAAGTAAGTAACCTAAACGCTCTTTTAGGTCAATTTTAGTTTAAAAATTATAAATTGTTCAATCTCAATTCACTTTCACTGTGAGTAAGGCCTTCCAATTCTCTACAATTAAATTATACATGTCAATCAAGCTACGTTCACATTGACATTCAAGTAAATATATATATATATATATATATATATAAAATAATAAATCAGCAATCAATATATAAAGATTTGAGTTTATAACCTCCCAACCTTATTATATTAGTTTAATGTTGCAAACTGTTTTATAATTATAAGGGCTAAAAACATGATTTCATATTAAAGAAAAAAAAGGGAAGAATAAACCTTTTCATATGAAATATTTATCTTTGTATTGTCAACACCTTATACCCTCACTCACATATTGTAAAAAAAAACATATTTTAATACTTAAGTTAGGTACAAAAGTTATTCCATTAAAAGAAAAATAGTATTATATATATATATATATATAAATAGTAACCATTGATAGAAGTTATTATTTTTAATATATAACACATTTTGTTGTTAGGTTGATAGAAAGGTAAAATGGCTTCTTCAAGCTACTCCTCAAGCTCTCCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCAGACTGCATATTTGCACCCTACTTTCCTCCCGAAGAGCCAACCAAATTCGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTCCTCAACGAGGTCCAGCCACACCAGCGCGAGGACATGGTCAATTCTCTAGCCTACGAGGCCGAGGCTCGCATGAAAGACCCCGTCTACGGCTGCGTCGGGGCCATCTCCATGCTGCAGCGACAAGTCATTCACCTGCAGAAGGAACTCGACGCTACAAACGCTGATTTGGTACGATACTCACAATTTGGAAGGAGGGCGCCTGCGGGTTCGGGGAGTCGACGTCACTCTGGCGTTTGTTTTGTTTCTCCCTCAAATAACAATGAACATGGTGACCATCCTTATTGCCATGATAAAGAGGAAGGGAATTGAAAGCTTTGTGTGTCATTGTGAGTGAGAGGTTGTTGCCTTTTTTTTCTTCTTTCCTCCATTCTGTTCATCCTATGCTCTTCTTCTAAGGTTTTTGGTACTTTCTTTTTTCTTAAATCTATCATAAAGATGGCGTTTTATTTTATTTTTATTTCACTTTTTTTTGCTATTATTTATTTTTTAATTGGG

mRNA sequence

CTTTTGCCTTAGGTTTTTGCAGGCCCCCCTTTTCTCTCTTTCTCTTAATTCTCCTCTCTTTTTTTCTAGGGTTTCTAATTCCCTTTTATTTCCTCATTTCTTTTTAAAAAAATACATATTATTTTTATGTATCTCTCTCATCTCTTTCAAACAAGCATCTCAAAAGGTTGATAGAAAGGTAAAATGGCTTCTTCAAGCTACTCCTCAAGCTCTCCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCAGACTGCATATTTGCACCCTACTTTCCTCCCGAAGAGCCAACCAAATTCGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTCCTCAACGAGGTCCAGCCACACCAGCGCGAGGACATGGTCAATTCTCTAGCCTACGAGGCCGAGGCTCGCATGAAAGACCCCGTCTACGGCTGCGTCGGGGCCATCTCCATGCTGCAGCGACAAGTCATTCACCTGCAGAAGGAACTCGACGCTACAAACGCTGATTTGGTACGATACTCACAATTTGGAAGGAGGGCGCCTGCGGGTTCGGGGAGTCGACGTCACTCTGGCGTTTGTTTTGTTTCTCCCTCAAATAACAATGAACATGGTGACCATCCTTATTGCCATGATAAAGAGGAAGGGAATTGAAAGCTTTGTGTGTCATTGTGAGTGAGAGGTTGTTGCCTTTTTTTTCTTCTTTCCTCCATTCTGTTCATCCTATGCTCTTCTTCTAAGGTTTTTGGTACTTTCTTTTTTCTTAAATCTATCATAAAGATGGCGTTTTATTTTATTTTTATTTCACTTTTTTTTGCTATTATTTATTTTTTAATTGGG

Coding sequence (CDS)

ATGGCTTCTTCAAGCTACTCCTCAAGCTCTCCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCAGACTGCATATTTGCACCCTACTTTCCTCCCGAAGAGCCAACCAAATTCGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTCCTCAACGAGGTCCAGCCACACCAGCGCGAGGACATGGTCAATTCTCTAGCCTACGAGGCCGAGGCTCGCATGAAAGACCCCGTCTACGGCTGCGTCGGGGCCATCTCCATGCTGCAGCGACAAGTCATTCACCTGCAGAAGGAACTCGACGCTACAAACGCTGATTTGGTACGATACTCACAATTTGGAAGGAGGGCGCCTGCGGGTTCGGGGAGTCGACGTCACTCTGGCGTTTGTTTTGTTTCTCCCTCAAATAACAATGAACATGGTGACCATCCTTATTGCCATGATAAAGAGGAAGGGAATTGA

Protein sequence

MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQFGRRAPAGSGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN

Homology

[Close]

BLAST of Sed0011113 vs. NCBI nr
Match: XP_038890699.1 (LOB domain-containing protein 25-like [Benincasa hispida] >XP_038890700.1 LOB domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 261.5 bits (667), Expect = 4.5e-66
Identity = 136/165 (82.42%), Postives = 144/165 (87.27%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSSY S+SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ
Sbjct: 1   MASSSY-SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY------ 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY      
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 --SQFGRRAPAGSGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
             SQFGRRA   S +R HSG+ F+SP ++N+H D  YCHDKEEGN
Sbjct: 121 PPSQFGRRAATASITRHHSGLSFLSPLSSNDH-DASYCHDKEEGN 163

[Close]

BLAST of Sed0011113 vs. NCBI nr
Match: KAA0037575.1 (LOB domain-containing protein 25 [Cucumis melo var. makuwa] >TYK03097.1 LOB domain-containing protein 25 [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 134/167 (80.24%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSSY ++SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ
Sbjct: 1   MASSSY-TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY------ 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY      
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSAR 120

Query: 121 --SQFGRRAPAG--SGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
             SQ+GRRA     S +R HSG+ F+SP ++N H D PYCH+KEEGN
Sbjct: 121 PPSQYGRRATTASVSSTRHHSGLSFLSPLSSNHH-DDPYCHEKEEGN 165

[Close]

BLAST of Sed0011113 vs. NCBI nr
Match: XP_008458802.1 (PREDICTED: LOB domain-containing protein 25 [Cucumis melo] >XP_016902322.1 PREDICTED: LOB domain-containing protein 25 [Cucumis melo])

HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64
Identity = 133/167 (79.64%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSSY ++SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ
Sbjct: 1   MASSSY-TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY------ 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY      
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSAR 120

Query: 121 --SQFGRRAPAG--SGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
             SQ+GRRA     S +R HSG+ F+SP ++N H D PYCH+ EEGN
Sbjct: 121 PPSQYGRRATTASVSSTRHHSGLSFLSPLSSNHH-DDPYCHENEEGN 165

[Close]

BLAST of Sed0011113 vs. NCBI nr
Match: XP_011655399.1 (LOB domain-containing protein 25 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 9.5e-64
Identity = 133/166 (80.12%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSSY ++SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ
Sbjct: 1   MASSSY-TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY------ 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY      
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSAR 120

Query: 121 --SQFGRRAPAGS-GSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
             SQ+GRRA   S  +R HSG+ F+SP +++ H D  YCHDKEEGN
Sbjct: 121 PPSQYGRRATTASVSTRHHSGLSFLSPLSSSHH-DSTYCHDKEEGN 164

[Close]

BLAST of Sed0011113 vs. NCBI nr
Match: XP_022991035.1 (LOB domain-containing protein 25-like [Cucurbita maxima])

HSP 1 Score: 252.7 bits (644), Expect = 2.1e-63
Identity = 129/157 (82.17%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS  S+SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV 
Sbjct: 1   MASSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQFGRR 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY+  G R
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 APAGSGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
            P G  +   SGVCF+SP N+N+  D PYCHDKEE N
Sbjct: 121 -PYGRRAAAQSGVCFISPLNSNDRHD-PYCHDKEEEN 155

[Close]

BLAST of Sed0011113 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 196.4 bits (498), Expect = 2.4e-49
Identity = 93/123 (75.61%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 8   SSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDM 67
           ++SPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQRED 
Sbjct: 36  TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDA 95

Query: 68  VNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQ-FGRRAPAGSG 127
           VNSLAYEAEAR+KDPVYGCVGAIS+LQRQV+ LQ+EL+ TNADL+RY+   G    +  G
Sbjct: 96  VNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTSAYG 155

Query: 128 SRR 130
            RR
Sbjct: 156 GRR 158

[Close]

BLAST of Sed0011113 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.9e-49
Identity = 95/114 (83.33%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS S +SPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY 115
           PHQRED VNSLAYEAEAR++DPVYGCVGAIS LQRQV  LQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of Sed0011113 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40
Identity = 78/118 (66.10%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASS  S++SPCAACKFLRRKC  +C+FAPYFPP++P KFANVHK+FGASNV+KLLNE+ 
Sbjct: 1   MASS--STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQFG 119
           P QRED VNSLAYEA+ R++DPVYGCVG IS+LQ Q+  LQ +L    ++L +Y   G
Sbjct: 61  PSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLG 116

[Close]

BLAST of Sed0011113 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-38
Identity = 74/125 (59.20%), Postives = 95/125 (76.00%), Query Frame = 0


Query: 3   SSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 62
           +++  + SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P+
Sbjct: 30  TAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPY 89

Query: 63  QREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQFGRRAP 122
           QRED VNSLAYEA+ R++DPVYGCV  IS+LQR +  LQ++L     +L +Y Q    A 
Sbjct: 90  QREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAA 149

Query: 123 AGSGS 128
           A S S
Sbjct: 150 AASAS 154

[Close]

BLAST of Sed0011113 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-38
Identity = 74/125 (59.20%), Postives = 95/125 (76.00%), Query Frame = 0


Query: 3   SSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 62
           +++  + SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P+
Sbjct: 30  TAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPY 89

Query: 63  QREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQFGRRAP 122
           QRED VNSLAYEA+ R++DPVYGCV  IS+LQR +  LQ++L     +L +Y Q    A 
Sbjct: 90  QREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAA 149

Query: 123 AGSGS 128
           A S S
Sbjct: 150 AASAS 154

[Close]

BLAST of Sed0011113 vs. ExPASy TrEMBL
Match: A0A5A7T800 (LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00190 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.4e-65
Identity = 134/167 (80.24%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSSY ++SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ
Sbjct: 1   MASSSY-TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY------ 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY      
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSAR 120

Query: 121 --SQFGRRAPAG--SGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
             SQ+GRRA     S +R HSG+ F+SP ++N H D PYCH+KEEGN
Sbjct: 121 PPSQYGRRATTASVSSTRHHSGLSFLSPLSSNHH-DDPYCHEKEEGN 165

[Close]

BLAST of Sed0011113 vs. ExPASy TrEMBL
Match: A0A1S3C8P8 (LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64
Identity = 133/167 (79.64%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSSY ++SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ
Sbjct: 1   MASSSY-TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY------ 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY      
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSAR 120

Query: 121 --SQFGRRAPAG--SGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
             SQ+GRRA     S +R HSG+ F+SP ++N H D PYCH+ EEGN
Sbjct: 121 PPSQYGRRATTASVSSTRHHSGLSFLSPLSSNHH-DDPYCHENEEGN 165

[Close]

BLAST of Sed0011113 vs. ExPASy TrEMBL
Match: A0A0A0KSE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.6e-64
Identity = 133/166 (80.12%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSSY ++SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ
Sbjct: 1   MASSSY-TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY------ 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY      
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSAR 120

Query: 121 --SQFGRRAPAGS-GSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
             SQ+GRRA   S  +R HSG+ F+SP +++ H D  YCHDKEEGN
Sbjct: 121 PPSQYGRRATTASVSTRHHSGLSFLSPLSSSHH-DSTYCHDKEEGN 164

[Close]

BLAST of Sed0011113 vs. ExPASy TrEMBL
Match: A0A6J1JRR4 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111487747 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 129/157 (82.17%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS  S+SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV 
Sbjct: 1   MASSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQFGRR 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY+  G R
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 APAGSGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
            P G  +   SGVCF+SP N+N+  D PYCHDKEE N
Sbjct: 121 -PYGRRAAAQSGVCFISPLNSNDRHD-PYCHDKEEEN 155

[Close]

BLAST of Sed0011113 vs. ExPASy TrEMBL
Match: A0A6J1E293 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430146 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 128/157 (81.53%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS  S+SPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV 
Sbjct: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQFGRR 120
           PHQRED VNSLAYEAEARMKDPVYGCVGAIS+LQRQVI LQKELDATNADLVRY+  G R
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 APAGSGSRRHSGVCFVSPSNNNEHGDHPYCHDKEEGN 158
            P G  +   SGVCF+SP N N+  D PYC DKEE N
Sbjct: 121 -PYGRRAAAQSGVCFISPLNTNDRHD-PYCRDKEEQN 155

[Close]

BLAST of Sed0011113 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-50
Identity = 93/123 (75.61%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 8   SSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDM 67
           ++SPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQRED 
Sbjct: 36  TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDA 95

Query: 68  VNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRYSQ-FGRRAPAGSG 127
           VNSLAYEAEAR+KDPVYGCVGAIS+LQRQV+ LQ+EL+ TNADL+RY+   G    +  G
Sbjct: 96  VNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTSAYG 155

Query: 128 SRR 130
            RR
Sbjct: 156 GRR 158

[Close]

BLAST of Sed0011113 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 194.5 bits (493), Expect = 6.4e-50
Identity = 95/114 (83.33%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS S +SPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY 115
           PHQRED VNSLAYEAEAR++DPVYGCVGAIS LQRQV  LQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of Sed0011113 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 194.5 bits (493), Expect = 6.4e-50
Identity = 95/114 (83.33%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS S +SPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY 115
           PHQRED VNSLAYEAEAR++DPVYGCVGAIS LQRQV  LQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of Sed0011113 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 194.5 bits (493), Expect = 6.4e-50
Identity = 95/114 (83.33%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS S +SPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY 115
           PHQRED VNSLAYEAEAR++DPVYGCVGAIS LQRQV  LQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of Sed0011113 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 194.5 bits (493), Expect = 6.4e-50
Identity = 95/114 (83.33%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 1   MASSSYSSSSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS S +SPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDMVNSLAYEAEARMKDPVYGCVGAISMLQRQVIHLQKELDATNADLVRY 115
           PHQRED VNSLAYEAEAR++DPVYGCVGAIS LQRQV  LQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

The following BLAST results are available for this feature:

BLAST of Sed0011113 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890699.1	4.5e-66	82.42	LOB domain-containing protein 25-like [Benincasa hispida] >XP_038890700.1 LOB do...	[more]
KAA0037575.1	1.1e-64	80.24	LOB domain-containing protein 25 [Cucumis melo var. makuwa] >TYK03097.1 LOB doma...	[more]
XP_008458802.1	4.3e-64	79.64	PREDICTED: LOB domain-containing protein 25 [Cucumis melo] >XP_016902322.1 PREDI...	[more]
XP_011655399.1	9.5e-64	80.12	LOB domain-containing protein 25 [Cucumis sativus]	[more]
XP_022991035.1	2.1e-63	82.17	LOB domain-containing protein 25-like [Cucurbita maxima]	[more]

BLAST of Sed0011113 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	2.4e-49	75.61	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	8.9e-49	83.33	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	1.2e-40	66.10	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
A2WXT0	1.4e-38	59.20	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	1.4e-38	59.20	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of Sed0011113 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T800	5.4e-65	80.24	LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C8P8	2.1e-64	79.64	LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV...	[more]
A0A0A0KSE8	4.6e-64	80.12	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV...	[more]
A0A6J1JRR4	1.0e-63	82.17	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148774...	[more]
A0A6J1E293	1.1e-62	81.53	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]

BLAST of Sed0011113 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	1.7e-50	75.61	LOB domain-containing protein 25	[more]
AT5G63090.2	6.4e-50	83.33	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	6.4e-50	83.33	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	6.4e-50	83.33	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	6.4e-50	83.33	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..157
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 4..122
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 4..122
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 11..107 e-value: 9.7E-42 score: 141.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 10..111 score: 27.370764

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011113.2	Sed0011113.2	mRNA
Sed0011113.1	Sed0011113.1	mRNA