Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAATCTCTGTATTCAAAGAACGAATGAAGTTCTTCGAAACCTATTTCATCTGCTATTCATCTTCGACGACTCTTTGATAGTAAAAAAGGTATGATTTTTTTTTTTGAATCGTTTCTTTTTAACTCTGAAAACGTCCGATTCGGGCGAAATGCGATTCAAAATTACGATATGAATCGATTTCTTCAGGATTCGTTTCGAATCGTACGTTTTGAATCGAAAAACGCACGTTTTTTATAACCTCGTTAACTTGAGTTCAGGTCTTGGGACGGGTGTGGGTGTCCTTAGGTATGTAGTGGGTCGAAACTATGATTGCCGATTATGAAAATACGTAAGCTTCTGAATTTAGGGAAGGTATCACAAAAATGTATTTTACCGTAGTCGACCACCATGGGTTGGCTTAGTGGTCAAGAGGGTCTCTAAAAACCTAAAGGTTTCAATTCATAGTTTCAATTCATGGTGACGACTAACAAGTCACTGACCACCTACTTAAAAATGAATTTTCTTCAGGTTTCTTTGACATCTAAATGTCATAGGGTCAAGTAAGTTGTCATGTGAGAATATTCGAGGTTTGTGTAAATTGATCTGAACACTCACAGATATTCAAAAAAAGATAGATTTCCTGTGTCCTCCCATCATGTATTTATTTTATCTGGTTGTGCCTGGTAGTTCTTATGATTCATATCTGATGCTGGGAGCTTGGATATCAGGGTGCTGGCAGCATATGACCATAGAGGTGTTTATCGAAGTATGAGCATCATGCAGATAACAGCTACACAGAGTTCTATTTGTGCCAATAATTCAACATGCCTTGTTTCTAAGTTAATATATCCATCATTCCATGCCAGTCAGTCACGAAGTGCTTTTGTGAACCTTAGTGCCAATGCATCTTATTTCAAGCAAGGTCTACCAGTATTGAAGTATAAACATCGAAGGGTCGGATTAAAACATCGGCATACCCTAATTGTTTCCTTATTTGGTAGCAAGGGAAATGACAGTGGTGATGGGGTGAGAACATCTACTAGTTTGTGATCATTGGTTGTGTATTCTTCAAATTGTTTCTTATGTTAGTAAAATTTATTCTCTTATGCCTTATTCTGCCTGTAATCCTTTGTCTAGCCTTCTTCTTTCTTCTTTCTTCTTTCTTTTCTTTTTATTTATTTGTCAACAGATATTTTGGACGTTCTAAAAGAAAAGAAATGTTTATAATTTGGTTTTCAATAGTTTGAAAATTTTCTAAGAAGTGGTGCAACAAAAAATGTTTATAACTCTGGATAGTATAATATGTTTCTTGCTATTCTTTTATTTCTCATTAGGTTTCTAGAGTACATTTAATTGGTGATTCTCTGCAGAATGAGGAAATTTAGCTTAACATTGTTATTTCTATCTTGTTACTGACGAGTGTTTAACATACATCTATGCATTAAATTAACTTTGGGAATGTCAGCAATTGTTGTATTTTTTCATCAATCCATTAACTTTTCATGTTCGATCATACTTTTCTGATTTCAAGCTCCTATTTTTTTTTATATTTGGAAAATAAGTTCAGAATTGCTGCTAGTTTGGTAAGGTTACCTTGATAGGTTGAGATATATGACAAGAAATTACCATCTGTTTTATTCTCTATTCAGCCATTCCCAAAGGGAAACAATTTAGATTAGTTCATTTTTGTTTTTTCTAGTTTAATTTTTTTTTAGTTCTAGTCGTTTGGAAGGAGGATTAGGAGCGTTTATTTATTTTATTCACTATTATGAGCATTTCCCTATTCTGGTTTGGAATTTCATGTGTAAATCATAACATTTGGAGTTTGATAAGTTGCTATTTAAAAGGTTTCTCGAAATTGATATAGCAATATTATTCTCTTTTTTTCTTTTTTCTAGCAGGGTTCTCCATGGAAAGCTTTTGACAAAGTTTTTGAAAATTTTAAGAAAGGAGGAGGGTCAGTAGAAGATGTATTGCGTCAGCAAATTGAAAAGAAAGAGTTCTTTGATGGTGGAGATGGTGGAAATAGACCCCCAAGAGGTGGTGGCGGTGGCAGCGGTAGCGGTAGCGAAGATAGCTCTAGTGGGTCTGAGGATGATAACCTTGCAGCAATTATGGAAGAAACACTGCAAGTGGTTCTTGCAACCATGGGCTTTATTTTCTTGGTAATAATCCTTATTCTTGAAAATTACAAAGTAGAGGAATTCACTGTCCCATGCTAAAATGGAGGGTGTGTACTTCGACAAAGTACCTTGTAACGAAAAGTTCTCCTATAATAGAATTCGTGGATAACTACTAGATCTGCTATTATTTATTTCTTATGATCTATCTAAATATTGTAAGATCAGATAGATTTTTCCGTCGAAGTGCAATTGGTTAATGAGCTAGCCTCTAGATGAGATGGTGATGCTATTAAGACCTTTTATTAGTCGAGCTAAGAGAAGAGTTCTATGATTCAGAAAGCTGCAAAGAGAGGATTTTGATCTATGAAAGTCTCTGGTTCCTATAAAAAAAAAGAAAAAGAAAACGATTTTAATCTGTAAAATTTACTCTTTTCAAACTAGCATTAGTAGTGTTGTGGCTTCTATTGCCTTCAGGGTCAAGTTCGTTGCTTTGGATGCATGTCATGATGTTGAGAAGTTTACAAAGCTTCACATCTTTTCTTGTTTGAATGTTTGTATGGACAGTACATTTACATCCTTAGGGGGGAAGAGCTGACTCGATTGGTGCGGGATTACATCAAGTATCTCTTCGGAGGAAGCAAGAGTGTCCGTTTGAAGCGATCGATGTACGAATGGGGAGTGTTTTACCAGAGACTGACTGAAAAGAAGCAATATGATGAATACTGGCTGGAGAAAGCTATTCTGAACACCCCAACTTGGTGGGATCATCCAGATAATTACAGGCGTACTGTAATGGCTTATATCGATTCGAAGAATCCAAAACAGAAGTCCGCATCAGCATCATATGACGACGACGACGAAGATGATGAGCGAAGTGATGATGATAAGCTAAGTGATGATGAGCCAGATTCTGATGAGGAATACTGAGTCCTTTTGCTTTAAACCAACCTGATTTTTTTTCTTCTTCTGGAATGTTAAGTTGGATATTGTATGGGGATGTTGGTGTAATGATGTACATCAATCTATTTGGTCACTTGTTTTCACCAATCTTTAAAATGTTCCAAGTTTTTTAACTGAACCCCAAATCTTTCTTAGCTCTTGGTAGCTTAAAGGTTAGCTCTTGGTAGCTTAATAGTTTTCTTTTTTTTTTTCATTTTTTCTTTTTAGC
mRNA sequence
ACAAAATCTCTGTATTCAAAGAACGAATGAAGTTCTTCGAAACCTATTTCATCTGCTATTCATCTTCGACGACTCTTTGATAGTAAAAAAGGGTGCTGGCAGCATATGACCATAGAGGTGTTTATCGAAGTATGAGCATCATGCAGATAACAGCTACACAGAGTTCTATTTGTGCCAATAATTCAACATGCCTTGTTTCTAAGTTAATATATCCATCATTCCATGCCAGTCAGTCACGAAGTGCTTTTGTGAACCTTAGTGCCAATGCATCTTATTTCAAGCAAGGTCTACCAGTATTGAAGTATAAACATCGAAGGGTCGGATTAAAACATCGGCATACCCTAATTGTTTCCTTATTTGGTAGCAAGGGAAATGACAGTGGTGATGGGGGTTCTCCATGGAAAGCTTTTGACAAAGTTTTTGAAAATTTTAAGAAAGGAGGAGGGTCAGTAGAAGATGTATTGCGTCAGCAAATTGAAAAGAAAGAGTTCTTTGATGGTGGAGATGGTGGAAATAGACCCCCAAGAGGTGGTGGCGGTGGCAGCGGTAGCGGTAGCGAAGATAGCTCTAGTGGGTCTGAGGATGATAACCTTGCAGCAATTATGGAAGAAACACTGCAAGTGGTTCTTGCAACCATGGGCTTTATTTTCTTGTACATTTACATCCTTAGGGGGGAAGAGCTGACTCGATTGGTGCGGGATTACATCAAGTATCTCTTCGGAGGAAGCAAGAGTGTCCGTTTGAAGCGATCGATGTACGAATGGGGAGTGTTTTACCAGAGACTGACTGAAAAGAAGCAATATGATGAATACTGGCTGGAGAAAGCTATTCTGAACACCCCAACTTGGTGGGATCATCCAGATAATTACAGGCGTACTGTAATGGCTTATATCGATTCGAAGAATCCAAAACAGAAGTCCGCATCAGCATCATATGACGACGACGACGAAGATGATGAGCGAAGTGATGATGATAAGCTAAGTGATGATGAGCCAGATTCTGATGAGGAATACTGAGTCCTTTTGCTTTAAACCAACCTGATTTTTTTTCTTCTTCTGGAATGTTAAGTTGGATATTGTATGGGGATGTTGGTGTAATGATGTACATCAATCTATTTGGTCACTTGTTTTCACCAATCTTTAAAATGTTCCAAGTTTTTTAACTGAACCCCAAATCTTTCTTAGCTCTTGGTAGCTTAAAGGTTAGCTCTTGGTAGCTTAATAGTTTTCTTTTTTTTTTTCATTTTTTCTTTTTAGC
Coding sequence (CDS)
ATGAGCATCATGCAGATAACAGCTACACAGAGTTCTATTTGTGCCAATAATTCAACATGCCTTGTTTCTAAGTTAATATATCCATCATTCCATGCCAGTCAGTCACGAAGTGCTTTTGTGAACCTTAGTGCCAATGCATCTTATTTCAAGCAAGGTCTACCAGTATTGAAGTATAAACATCGAAGGGTCGGATTAAAACATCGGCATACCCTAATTGTTTCCTTATTTGGTAGCAAGGGAAATGACAGTGGTGATGGGGGTTCTCCATGGAAAGCTTTTGACAAAGTTTTTGAAAATTTTAAGAAAGGAGGAGGGTCAGTAGAAGATGTATTGCGTCAGCAAATTGAAAAGAAAGAGTTCTTTGATGGTGGAGATGGTGGAAATAGACCCCCAAGAGGTGGTGGCGGTGGCAGCGGTAGCGGTAGCGAAGATAGCTCTAGTGGGTCTGAGGATGATAACCTTGCAGCAATTATGGAAGAAACACTGCAAGTGGTTCTTGCAACCATGGGCTTTATTTTCTTGTACATTTACATCCTTAGGGGGGAAGAGCTGACTCGATTGGTGCGGGATTACATCAAGTATCTCTTCGGAGGAAGCAAGAGTGTCCGTTTGAAGCGATCGATGTACGAATGGGGAGTGTTTTACCAGAGACTGACTGAAAAGAAGCAATATGATGAATACTGGCTGGAGAAAGCTATTCTGAACACCCCAACTTGGTGGGATCATCCAGATAATTACAGGCGTACTGTAATGGCTTATATCGATTCGAAGAATCCAAAACAGAAGTCCGCATCAGCATCATATGACGACGACGACGAAGATGATGAGCGAAGTGATGATGATAAGCTAAGTGATGATGAGCCAGATTCTGATGAGGAATACTGA
Protein sequence
MSIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKHRRVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEFFDGGDGGNRPPRGGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYIYILRGEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAILNTPTWWDHPDNYRRTVMAYIDSKNPKQKSASASYDDDDEDDERSDDDKLSDDEPDSDEEY
Homology
BLAST of Sed0011106 vs. NCBI nr
Match:
XP_038895689.1 (uncharacterized protein LOC120083861 [Benincasa hispida])
HSP 1 Score: 420.6 bits (1080), Expect = 1.1e-113
Identity = 222/283 (78.45%), Postives = 249/283 (87.99%), Query Frame = 0
Query: 1 MSIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKH 60
MS MQITATQ+SIC+N S CLVSK IYPSFHASQSRS VNLSAN S FKQGLPVLKYKH
Sbjct: 1 MSSMQITATQNSICSNKSICLVSKSIYPSFHASQSRSVLVNLSANGSSFKQGLPVLKYKH 60
Query: 61 RRVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEF 120
RRVGLKH+HT IVSLFGSKG D+GDGGSPWKAFD+V ENFKK G SVEDVLRQQIEKKEF
Sbjct: 61 RRVGLKHQHTPIVSLFGSKGKDTGDGGSPWKAFDQVVENFKK-GRSVEDVLRQQIEKKEF 120
Query: 121 FDGGDGGNRPPRGGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYIYILR 180
+DGG+GG RPP GGG GSGS DSSSGSEDD+LA I++ETLQVVLAT+GFIFLYIYI+
Sbjct: 121 YDGGNGGKRPPSGGG---GSGSGDSSSGSEDDSLAGILDETLQVVLATLGFIFLYIYIIN 180
Query: 181 GEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAILNTPTWW 240
GEEL RL +DYIKYLFGGSKSVRL+RSMY+WG FYQ+LTEKKQYDEYWLEKAILNTPTWW
Sbjct: 181 GEELARLAKDYIKYLFGGSKSVRLRRSMYQWGRFYQKLTEKKQYDEYWLEKAILNTPTWW 240
Query: 241 DHPDNYRRTVMAYIDSKNPKQKSASASYDDDDEDDERSDDDKL 284
DHPDNYRRTVMA+I+S++ K+ AS Y + D+ + SDD+++
Sbjct: 241 DHPDNYRRTVMAHIESQHQKENFASDDYGEVDKPN--SDDEEI 277
BLAST of Sed0011106 vs. NCBI nr
Match:
XP_022140099.1 (uncharacterized protein LOC111010834 [Momordica charantia])
HSP 1 Score: 402.1 bits (1032), Expect = 4.0e-108
Identity = 211/281 (75.09%), Postives = 238/281 (84.70%), Query Frame = 0
Query: 1 MSIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKH 60
MS MQITATQ+SIC++ S C+ SK IYPSF A++SRSA VNLSANASYFKQGLPVLKYKH
Sbjct: 1 MSSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKH 60
Query: 61 RRVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEF 120
RR GL H+HT IVSLFGSKG +SGDGGSPWK FDKV ENFKK G SVEDVLRQQIEKKEF
Sbjct: 61 RRAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKK-GRSVEDVLRQQIEKKEF 120
Query: 121 FDGGDGGNRPPRGGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYIYILR 180
+DGGDGG RPP GGG GS DSSSGSEDD+L I++ETLQV+LAT+GFIFLYIYI+
Sbjct: 121 YDGGDGGKRPPSGGG-----GSGDSSSGSEDDSLGGIIDETLQVILATIGFIFLYIYIIS 180
Query: 181 GEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAILNTPTWW 240
GEELTRL +DYIK++FGGSKSVRLKR+MY+WG FYQ+LTEKKQYDEYWLEKAI+NTPTWW
Sbjct: 181 GEELTRLAKDYIKFVFGGSKSVRLKRAMYKWGRFYQKLTEKKQYDEYWLEKAIINTPTWW 240
Query: 241 DHPDNYRRTVMAYIDSKNPKQKSASASYDDDDEDDERSDDD 282
DHPD YRR VM Y++S+ Q SAS DD + D SDD+
Sbjct: 241 DHPDKYRRAVMDYMESQYENQHSASNVNDDAEMDVSNSDDE 275
BLAST of Sed0011106 vs. NCBI nr
Match:
XP_008444591.1 (PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo])
HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-107
Identity = 209/282 (74.11%), Postives = 239/282 (84.75%), Query Frame = 0
Query: 1 MSIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKH 60
MS MQITATQ+SICAN S CLVSK IYPSFHA+QS A VNLSANASYFKQGLP+LKYKH
Sbjct: 1 MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60
Query: 61 RRVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEF 120
RRVGLKH+HT IVSLFGSKG S DGGSPWKAFDKV E+FKK GGSVEDVLR+QIEKKEF
Sbjct: 61 RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKK-GGSVEDVLRKQIEKKEF 120
Query: 121 FDGGDGGNRPPR------GGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFL 180
+DGGDGG RPP GGGGG GSGSEDSSSG++D +LA ++ETLQVVLAT+GFIF+
Sbjct: 121 YDGGDGGRRPPSGGGGGGGGGGGGGSGSEDSSSGAKDFSLAEALDETLQVVLATLGFIFM 180
Query: 181 YIYILRGEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAIL 240
Y Y+L GEE+TRL++DYIKY FGGSKSVRL+R+MYEWG FYQRLT KK+YDE+WLEKAI+
Sbjct: 181 YFYLLNGEEVTRLLKDYIKYRFGGSKSVRLRRAMYEWGRFYQRLTAKKKYDEFWLEKAII 240
Query: 241 NTPTWWDHPDNYRRTVMAYIDSKNPKQKSASASYDDDDEDDE 277
NTPTWWDHPDNYR MAY ++N ++ AS + D+D+E
Sbjct: 241 NTPTWWDHPDNYRHAAMAYGKAENQEKNFASDDDGETDDDEE 281
BLAST of Sed0011106 vs. NCBI nr
Match:
KGN65868.1 (hypothetical protein Csa_023343 [Cucumis sativus])
HSP 1 Score: 372.1 bits (954), Expect = 4.5e-99
Identity = 199/276 (72.10%), Postives = 224/276 (81.16%), Query Frame = 0
Query: 1 MSIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKH 60
MS MQITATQ+SICAN S CLVSK IYPSFHA+QSR A VNLSANASYFKQGLPVLKY+H
Sbjct: 1 MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
Query: 61 RRVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEF 120
RRVGLK++HT IVSL+GSKG S DGGSPWK DKV E+FK G SVEDVLRQQIEKKEF
Sbjct: 61 RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFK--GRSVEDVLRQQIEKKEF 120
Query: 121 FDGGDGGNRPPRGGGGG----SGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYI 180
+DGGDGG RPP GGGG SG G EDSSSGSED +L IM+E LQV+LAT+G +F+YI
Sbjct: 121 YDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYI 180
Query: 181 YILRGEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAILNT 240
YIL GEEL+RL +DYIKYLFGGSKSVRLKR+MY WG FYQ L +KK+YD+YWLEKAIL+T
Sbjct: 181 YILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILST 240
Query: 241 PTWWDHPDNYRRTVMAYIDSKNPKQKSASASYDDDD 273
PTWWD+PD Y ++N KQ AS YD+ D
Sbjct: 241 PTWWDNPDKYMPK-----KAQNQKQNVASDDYDETD 269
BLAST of Sed0011106 vs. NCBI nr
Match:
XP_022994855.1 (uncharacterized protein LOC111490456 [Cucurbita maxima])
HSP 1 Score: 356.3 bits (913), Expect = 2.5e-94
Identity = 190/291 (65.29%), Postives = 226/291 (77.66%), Query Frame = 0
Query: 2 SIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKHR 61
S+MQITATQ+S+C N S CLVSK YPSF ASQ+RSAFVN SAN SY K+GLPVLKY HR
Sbjct: 3 SMMQITATQNSLCPNKSLCLVSKSSYPSFLASQTRSAFVNPSANTSYLKKGLPVLKYDHR 62
Query: 62 RVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEFF 121
RVGLKHR+T I SLFGSKG D+GDGGSPWKAFDKV ENFKK G SVED+LRQQIE K+F+
Sbjct: 63 RVGLKHRYTPIASLFGSKGKDNGDGGSPWKAFDKVVENFKK-GRSVEDILRQQIENKDFY 122
Query: 122 DGGDGGNRPPRGGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYIYILRG 181
DGGDGG PP GGGG SG DSSS SED N+ I+EET+ VVLAT+G + +YIYI+ G
Sbjct: 123 DGGDGGRTPPGGGGGSSGG---DSSSESEDHNILGILEETMHVVLATIGLVLVYIYIIEG 182
Query: 182 EELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQY-DEYWLEKAILNTPTWW 241
+EL L +DYIKYLFG +S RLK +MY WG FY+R T KKQ DEYWLEKAILNTPTWW
Sbjct: 183 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTRKKQKPDEYWLEKAILNTPTWW 242
Query: 242 DHPDNYRRTVMAYIDSKNPKQ---------KSASASYDDDDEDDERSDDDK 283
DHPD YR +M Y++S+ ++ S+S+SYDD++ ++ SDD++
Sbjct: 243 DHPDKYRYAIMEYLESQRQQESPAASSSSSSSSSSSYDDEEYEESNSDDEQ 289
BLAST of Sed0011106 vs. ExPASy TrEMBL
Match:
A0A6J1CES8 (uncharacterized protein LOC111010834 OS=Momordica charantia OX=3673 GN=LOC111010834 PE=4 SV=1)
HSP 1 Score: 402.1 bits (1032), Expect = 2.0e-108
Identity = 211/281 (75.09%), Postives = 238/281 (84.70%), Query Frame = 0
Query: 1 MSIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKH 60
MS MQITATQ+SIC++ S C+ SK IYPSF A++SRSA VNLSANASYFKQGLPVLKYKH
Sbjct: 1 MSSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKH 60
Query: 61 RRVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEF 120
RR GL H+HT IVSLFGSKG +SGDGGSPWK FDKV ENFKK G SVEDVLRQQIEKKEF
Sbjct: 61 RRAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKK-GRSVEDVLRQQIEKKEF 120
Query: 121 FDGGDGGNRPPRGGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYIYILR 180
+DGGDGG RPP GGG GS DSSSGSEDD+L I++ETLQV+LAT+GFIFLYIYI+
Sbjct: 121 YDGGDGGKRPPSGGG-----GSGDSSSGSEDDSLGGIIDETLQVILATIGFIFLYIYIIS 180
Query: 181 GEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAILNTPTWW 240
GEELTRL +DYIK++FGGSKSVRLKR+MY+WG FYQ+LTEKKQYDEYWLEKAI+NTPTWW
Sbjct: 181 GEELTRLAKDYIKFVFGGSKSVRLKRAMYKWGRFYQKLTEKKQYDEYWLEKAIINTPTWW 240
Query: 241 DHPDNYRRTVMAYIDSKNPKQKSASASYDDDDEDDERSDDD 282
DHPD YRR VM Y++S+ Q SAS DD + D SDD+
Sbjct: 241 DHPDKYRRAVMDYMESQYENQHSASNVNDDAEMDVSNSDDE 275
BLAST of Sed0011106 vs. ExPASy TrEMBL
Match:
A0A1S3BA69 (uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=4 SV=1)
HSP 1 Score: 400.6 bits (1028), Expect = 5.7e-108
Identity = 209/282 (74.11%), Postives = 239/282 (84.75%), Query Frame = 0
Query: 1 MSIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKH 60
MS MQITATQ+SICAN S CLVSK IYPSFHA+QS A VNLSANASYFKQGLP+LKYKH
Sbjct: 1 MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60
Query: 61 RRVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEF 120
RRVGLKH+HT IVSLFGSKG S DGGSPWKAFDKV E+FKK GGSVEDVLR+QIEKKEF
Sbjct: 61 RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKK-GGSVEDVLRKQIEKKEF 120
Query: 121 FDGGDGGNRPPR------GGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFL 180
+DGGDGG RPP GGGGG GSGSEDSSSG++D +LA ++ETLQVVLAT+GFIF+
Sbjct: 121 YDGGDGGRRPPSGGGGGGGGGGGGGSGSEDSSSGAKDFSLAEALDETLQVVLATLGFIFM 180
Query: 181 YIYILRGEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAIL 240
Y Y+L GEE+TRL++DYIKY FGGSKSVRL+R+MYEWG FYQRLT KK+YDE+WLEKAI+
Sbjct: 181 YFYLLNGEEVTRLLKDYIKYRFGGSKSVRLRRAMYEWGRFYQRLTAKKKYDEFWLEKAII 240
Query: 241 NTPTWWDHPDNYRRTVMAYIDSKNPKQKSASASYDDDDEDDE 277
NTPTWWDHPDNYR MAY ++N ++ AS + D+D+E
Sbjct: 241 NTPTWWDHPDNYRHAAMAYGKAENQEKNFASDDDGETDDDEE 281
BLAST of Sed0011106 vs. ExPASy TrEMBL
Match:
A0A0A0LVP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1)
HSP 1 Score: 372.1 bits (954), Expect = 2.2e-99
Identity = 199/276 (72.10%), Postives = 224/276 (81.16%), Query Frame = 0
Query: 1 MSIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKH 60
MS MQITATQ+SICAN S CLVSK IYPSFHA+QSR A VNLSANASYFKQGLPVLKY+H
Sbjct: 1 MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
Query: 61 RRVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEF 120
RRVGLK++HT IVSL+GSKG S DGGSPWK DKV E+FK G SVEDVLRQQIEKKEF
Sbjct: 61 RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFK--GRSVEDVLRQQIEKKEF 120
Query: 121 FDGGDGGNRPPRGGGGG----SGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYI 180
+DGGDGG RPP GGGG SG G EDSSSGSED +L IM+E LQV+LAT+G +F+YI
Sbjct: 121 YDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYI 180
Query: 181 YILRGEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAILNT 240
YIL GEEL+RL +DYIKYLFGGSKSVRLKR+MY WG FYQ L +KK+YD+YWLEKAIL+T
Sbjct: 181 YILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILST 240
Query: 241 PTWWDHPDNYRRTVMAYIDSKNPKQKSASASYDDDD 273
PTWWD+PD Y ++N KQ AS YD+ D
Sbjct: 241 PTWWDNPDKYMPK-----KAQNQKQNVASDDYDETD 269
BLAST of Sed0011106 vs. ExPASy TrEMBL
Match:
A0A6J1K2H4 (uncharacterized protein LOC111490456 OS=Cucurbita maxima OX=3661 GN=LOC111490456 PE=4 SV=1)
HSP 1 Score: 356.3 bits (913), Expect = 1.2e-94
Identity = 190/291 (65.29%), Postives = 226/291 (77.66%), Query Frame = 0
Query: 2 SIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKHR 61
S+MQITATQ+S+C N S CLVSK YPSF ASQ+RSAFVN SAN SY K+GLPVLKY HR
Sbjct: 3 SMMQITATQNSLCPNKSLCLVSKSSYPSFLASQTRSAFVNPSANTSYLKKGLPVLKYDHR 62
Query: 62 RVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEFF 121
RVGLKHR+T I SLFGSKG D+GDGGSPWKAFDKV ENFKK G SVED+LRQQIE K+F+
Sbjct: 63 RVGLKHRYTPIASLFGSKGKDNGDGGSPWKAFDKVVENFKK-GRSVEDILRQQIENKDFY 122
Query: 122 DGGDGGNRPPRGGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYIYILRG 181
DGGDGG PP GGGG SG DSSS SED N+ I+EET+ VVLAT+G + +YIYI+ G
Sbjct: 123 DGGDGGRTPPGGGGGSSGG---DSSSESEDHNILGILEETMHVVLATIGLVLVYIYIIEG 182
Query: 182 EELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKKQY-DEYWLEKAILNTPTWW 241
+EL L +DYIKYLFG +S RLK +MY WG FY+R T KKQ DEYWLEKAILNTPTWW
Sbjct: 183 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTRKKQKPDEYWLEKAILNTPTWW 242
Query: 242 DHPDNYRRTVMAYIDSKNPKQ---------KSASASYDDDDEDDERSDDDK 283
DHPD YR +M Y++S+ ++ S+S+SYDD++ ++ SDD++
Sbjct: 243 DHPDKYRYAIMEYLESQRQQESPAASSSSSSSSSSSYDDEEYEESNSDDEQ 289
BLAST of Sed0011106 vs. ExPASy TrEMBL
Match:
A0A6J1GSZ4 (uncharacterized protein LOC111457207 OS=Cucurbita moschata OX=3662 GN=LOC111457207 PE=4 SV=1)
HSP 1 Score: 350.1 bits (897), Expect = 8.8e-93
Identity = 189/299 (63.21%), Postives = 227/299 (75.92%), Query Frame = 0
Query: 2 SIMQITATQSSICANNSTCLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKHR 61
S+MQITATQ+S+C N S CLVSK YPSF ASQ+RSAFVN SANASY K+GLPVLKY HR
Sbjct: 3 SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62
Query: 62 RVGLKHRHTLIVSLFGSKGNDSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEFF 121
RVGLKHR+T I SLFGSKG D+ DGGSPWKAFDKV ENFKK G SVED+LRQQIE K+F+
Sbjct: 63 RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKK-GRSVEDILRQQIENKDFY 122
Query: 122 DGGDGGNRPPRGGGGGSGSGSEDSSSGSEDDNLAAIMEETLQVVLATMGFIFLYIYILRG 181
DGGDGG PP GGGGG GS DSSS SED ++ I+EET+ VVLAT+G + +YIYI+ G
Sbjct: 123 DGGDGGRTPP-GGGGGGGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYIIEG 182
Query: 182 EELTRLVRDYIKYLFGGSKSVRLKRSMYEWGVFYQRLTEKK-QYDEYWLEKAILNTPTWW 241
+EL L +DYIKYLFG +S RLK +MY WG FY+R T+KK + DEYWLEKAILNTPTWW
Sbjct: 183 QELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTPTWW 242
Query: 242 DHPDNYRRTVMAYIDSKNPKQK-----------------SASASYDDDDEDDERSDDDK 283
DHPD YR +M Y++S+ + S+S+SYDD++ ++ SDD++
Sbjct: 243 DHPDKYRYAIMEYLESQGQLESPASSSSSSSSSSSSYDASSSSSYDDEEYEESNSDDEQ 299
BLAST of Sed0011106 vs. TAIR 10
Match:
AT2G43630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 206.8 bits (525), Expect = 2.3e-53
Identity = 117/243 (48.15%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 20 CLVSKLIYPSFHASQSRSAFVNLSANASYFKQGLPVLKYKHRRVGLKHRHTLIVSLFGSK 79
C+ S I S L A A+ Q P+L ++ R K + + V LFG K
Sbjct: 23 CISSVPIRSSVRFDHFPRTSFTLRATAAVSTQFSPLLDHRRRLPTGKSKQSSAVCLFGGK 82
Query: 80 GN-DSGDGGSPWKAFDKVFENFKKGGGSVEDVLRQQIEKKEFFDGGDGGNRPPRGGGGGS 139
D D SPWKA +K G SVED+LR+QI+KK+F+D GGN PPRGGG G
Sbjct: 83 DKPDGSDEISPWKAIEKAM-----GKKSVEDMLREQIQKKDFYDTDSGGNMPPRGGGSGG 142
Query: 140 GSGSED---SSSGSEDDNLAAIMEETLQVVLATMGFIFLYIYILRGEELTRLVRDYIKYL 199
G G+ + SG ED LA I +ETLQVVLAT+GFIFLY YI+ GEEL +L RDYI++L
Sbjct: 143 GGGNGEERPEGSGGEDGGLAGIADETLQVVLATLGFIFLYTYIITGEELVKLARDYIRFL 202
Query: 200 FGGSKSVRLKRSMYEWGVFYQRLTEKKQYDEYWLEKAILNTPTWWDHPDNYRRTVMAYID 259
G K+VRL R+M W F ++++ ++ YDEYWLEKAI+NTPTW+D P+ YRR + AY+D
Sbjct: 203 MGRPKTVRLTRAMDSWNGFLEKMSRQRVYDEYWLEKAIINTPTWYDSPEKYRRVIKAYVD 260
BLAST of Sed0011106 vs. TAIR 10
Match:
AT3G59640.1 (glycine-rich protein )
HSP 1 Score: 138.3 bits (347), Expect = 1.0e-32
Identity = 92/197 (46.70%), Postives = 119/197 (60.41%), Query Frame = 0
Query: 40 VNLSANASYFKQGLPVLKYKHRRVGLKHRHTLIVSLFG--SKGNDSGDGGSPWKAFDKVF 99
+ SA++S Q P+ ++ R R +V L G K N S + S W+A +K
Sbjct: 45 IRASASSSMSSQFSPLQNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAM 104
Query: 100 ENFKKGGGSVEDVLRQQIEKKEFFDGGDGGNRPP--RGGGGGSGSGSEDSSSGS--EDDN 159
G SVED+LR+QI+KK D G PP RGGGGG +G + S GS ED
Sbjct: 105 -----GKKSVEDMLREQIQKK------DTGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGG 164
Query: 160 LAAIMEETLQVVLATMGFIFLYIYILRGEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGV 219
LA+ +ETLQVVLAT+GFIFLY YI+ GEEL RL RDYI+YL G KSVRL R M W
Sbjct: 165 LASFGDETLQVVLATLGFIFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSR 224
Query: 220 FYQRLTEKKQYDEYWLE 231
F+++++ KK Y+EYWL+
Sbjct: 225 FFEKMSRKKVYNEYWLK 226
BLAST of Sed0011106 vs. TAIR 10
Match:
AT3G59640.2 (glycine-rich protein )
HSP 1 Score: 138.3 bits (347), Expect = 1.0e-32
Identity = 92/197 (46.70%), Postives = 119/197 (60.41%), Query Frame = 0
Query: 40 VNLSANASYFKQGLPVLKYKHRRVGLKHRHTLIVSLFG--SKGNDSGDGGSPWKAFDKVF 99
+ SA++S Q P+ ++ R R +V L G K N S + S W+A +K
Sbjct: 45 IRASASSSMSSQFSPLQNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAM 104
Query: 100 ENFKKGGGSVEDVLRQQIEKKEFFDGGDGGNRPP--RGGGGGSGSGSEDSSSGS--EDDN 159
G SVED+LR+QI+KK D G PP RGGGGG +G + S GS ED
Sbjct: 105 -----GKKSVEDMLREQIQKK------DTGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGG 164
Query: 160 LAAIMEETLQVVLATMGFIFLYIYILRGEELTRLVRDYIKYLFGGSKSVRLKRSMYEWGV 219
LA+ +ETLQVVLAT+GFIFLY YI+ GEEL RL RDYI+YL G KSVRL R M W
Sbjct: 165 LASFGDETLQVVLATLGFIFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSR 224
Query: 220 FYQRLTEKKQYDEYWLE 231
F+++++ KK Y+EYWL+
Sbjct: 225 FFEKMSRKKVYNEYWLK 226
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038895689.1 | 1.1e-113 | 78.45 | uncharacterized protein LOC120083861 [Benincasa hispida] | [more] |
XP_022140099.1 | 4.0e-108 | 75.09 | uncharacterized protein LOC111010834 [Momordica charantia] | [more] |
XP_008444591.1 | 1.2e-107 | 74.11 | PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo] | [more] |
KGN65868.1 | 4.5e-99 | 72.10 | hypothetical protein Csa_023343 [Cucumis sativus] | [more] |
XP_022994855.1 | 2.5e-94 | 65.29 | uncharacterized protein LOC111490456 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CES8 | 2.0e-108 | 75.09 | uncharacterized protein LOC111010834 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
A0A1S3BA69 | 5.7e-108 | 74.11 | uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=... | [more] |
A0A0A0LVP5 | 2.2e-99 | 72.10 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1 | [more] |
A0A6J1K2H4 | 1.2e-94 | 65.29 | uncharacterized protein LOC111490456 OS=Cucurbita maxima OX=3661 GN=LOC111490456... | [more] |
A0A6J1GSZ4 | 8.8e-93 | 63.21 | uncharacterized protein LOC111457207 OS=Cucurbita moschata OX=3662 GN=LOC1114572... | [more] |