Sed0011087 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACTACTAAACAAAACAAAACAAGCCATCACAAACACTTGTTTCATATAAAACAATCCCAAAGGCTACGATATGACTATCGGATTAGGATTTGGCTTCCATCTTGGTTTGCGCGATCACCATGGTCATCGGCGACCGGGGTGCCAACCATGTCAAGCTGGGAAATGGGAAGTGATCACCGATCTCGGGTCGTCGTGCGTTCAAGATGTTGCGAAGTTCGCGGTGCAAGAACACAACAGTAAACATTGGGGATTAAACTTGACATACAGGCACACAATTGCAGCTTGGTACACTGAAGTGGAGAATGGAAGCTTGAAGTTACGTCTCCATATTCAAGTTGCACGTTCTTGTGGACGTACTGAAAACCATGAAGCTATTGTGCATGAAAAGAACACCGAATGTGGGAGAAACAAGATACTTGAATCATTCAGGCGTCTGTAGAGAAGTTACAAAAATTTCTCTTTTAAAATTCATCATATCTATATATGCCACTCATGTTGTATTGGATTTGATGATCTAAGTTTAATATACAATCAAAATAAACCTTATTATATAGCTAATCGTCTCTCTATGGTCAAAGTATTTATCATCAATATGTTGTTGCTTTCCTACTGATATATTCCCATAACTATAAATTTGTTTTGTTCGGAGATAGATTTTACGGTTATCTTGTTTGGTGGTAATCCATTTTAATAGCATTTGGTCTTTATTAG CAACTACTAAACAAAACAAAACAAGCCATCACAAACACTTGTTTCATATAAAACAATCCCAAAGGCTACGATATGACTATCGGATTAGGATTTGGCTTCCATCTTGGTTTGCGCGATCACCATGGTCATCGGCGACCGGGGTGCCAACCATGTCAAGCTGGGAAATGGGAAGTGATCACCGATCTCGGGTCGTCGTGCGTTCAAGATGTTGCGAAGTTCGCGGTGCAAGAACACAACAGTAAACATTGGGGATTAAACTTGACATACAGGCACACAATTGCAGCTTGGTACACTGAAGTGGAGAATGGAAGCTTGAAGTTACGTCTCCATATTCAAGTTGCACGTTCTTGTGGACGTACTGAAAACCATGAAGCTATTGTGCATGAAAAGAACACCGAATGTGGGAGAAACAAGATACTTGAATCATTCAGGCGTCTGTAGAGAAGTTACAAAAATTTCTCTTTTAAAATTCATCATATCTATATATGCCACTCATGTTGTATTGGATTTGATGATCTAAGTTTAATATACAATCAAAATAAACCTTATTATATAGCTAATCGTCTCTCTATGGTCAAAGTATTTATCATCAATATGTTGTTGCTTTCCTACTGATATATTCCCATAACTATAAATTTGTTTTGTTCGGAGATAGATTTTACGGTTATCTTGTTTGGTGGTAATCCATTTTAATAGCATTTGGTCTTTATTAG ATGACTATCGGATTAGGATTTGGCTTCCATCTTGGTTTGCGCGATCACCATGGTCATCGGCGACCGGGGTGCCAACCATGTCAAGCTGGGAAATGGGAAGTGATCACCGATCTCGGGTCGTCGTGCGTTCAAGATGTTGCGAAGTTCGCGGTGCAAGAACACAACAGTAAACATTGGGGATTAAACTTGACATACAGGCACACAATTGCAGCTTGGTACACTGAAGTGGAGAATGGAAGCTTGAAGTTACGTCTCCATATTCAAGTTGCACGTTCTTGTGGACGTACTGAAAACCATGAAGCTATTGTGCATGAAAAGAACACCGAATGTGGGAGAAACAAGATACTTGAATCATTCAGGCGTCTGTAG MTIGLGFGFHLGLRDHHGHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESFRRL Homology
BLAST of Sed0011087 vs. NCBI nr
Match: KAG6607543.1 (hypothetical protein SDJN03_00885, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16 Identity = 53/120 (44.17%), Postives = 68/120 (56.67%), Query Frame = 0
BLAST of Sed0011087 vs. NCBI nr
Match: KAG6607542.1 (hypothetical protein SDJN03_00884, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.8 bits (229), Expect = 2.2e-15 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Sed0011087 vs. NCBI nr
Match: XP_022989567.1 (uncharacterized protein LOC111486626 isoform X2 [Cucurbita maxima]) HSP 1 Score: 70.9 bits (172), Expect = 8.8e-09 Identity = 42/105 (40.00%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Sed0011087 vs. NCBI nr
Match: XP_022989566.1 (uncharacterized protein LOC111486626 isoform X1 [Cucurbita maxima]) HSP 1 Score: 70.9 bits (172), Expect = 8.8e-09 Identity = 42/105 (40.00%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Sed0011087 vs. NCBI nr
Match: AAC12676.1 (phloem filament protein [Cucurbita maxima]) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 0
BLAST of Sed0011087 vs. ExPASy Swiss-Prot
Match: P86472 (Cysteine proteinase inhibitor 1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CYT1 PE=1 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 8.0e-05 Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of Sed0011087 vs. ExPASy Swiss-Prot
Match: Q6TPK4 (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04 Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of Sed0011087 vs. ExPASy TrEMBL
Match: A0A6J1JKF7 (uncharacterized protein LOC111486626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486626 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.3e-09 Identity = 42/105 (40.00%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Sed0011087 vs. ExPASy TrEMBL
Match: A0A6J1JG70 (uncharacterized protein LOC111486626 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486626 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.3e-09 Identity = 42/105 (40.00%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Sed0011087 vs. ExPASy TrEMBL
Match: P94012 (Phloem filament protein OS=Cucurbita maxima OX=3661 GN=PP1 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.6e-09 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 0
BLAST of Sed0011087 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.3e-07 Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of Sed0011087 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 5.2e-07 Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|