Sed0011065 (gene) Chayote v1

Overview


Name	Sed0011065
Type	gene
Organism	Sechium edule (Chayote v1)
Description	BHLH domain-containing protein
Location	LG12: 5342868 .. 5343536 (-)
RNA-Seq Expression	Sed0011065
Synteny	Sed0011065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCTGCACCAACTCCGTGATTCCACTTTTTCCGCAGTTATTGCCGGCGCATCACCCTCAAGCCGCTGAGAACAACGCTTCCACCTCAAGAAAGCGTCACAAAGCTTTGGAACCCAGCGATGGCGCACAGAGGAAGGGAAGAGCGAAGAGGAAGAAGATGACCGAGAGTTTCGACGTTCTTCACTCTCTCGTGCCGAATATCTCTCCCAAGGTCAGCGGATTCGACTCTCTCGCTATTGTATAATCCGGCTACTTCTACATTTCTTGATCGCGATTATAATCTGGTTTTCGATGTTGAAATGATCAGGCTACGAGGGAGAAAATCGTTACGGAGACGATCCAGTTCATCCAGTTTCTGCAGAAGCAGTTGGTGAGGCTGGAAATGGAGAAGAAGCCAGTGGAATCGGTGAAATCGGATTCATCCGGCGACGTCGTCGTCTCGGTCTCCGGCAACATCGTGTTGTTTGGGATTATTGCTTCTGTTCGACGAGGTATGGTGACACAGATTTTAATGGCGTTTGAGAGACACCAGGCTGAAGTTCTTGCAGCTAATGTTGCTGTTAACCATGGAAATTTAAGTTTATCAGTTACAGCTTCTGTACACGATTACGTTGAGAATACCATAGAGAAGATTAGAAACGATATCCTGAACTTAGAGAAGTAA

mRNA sequence

ATGGAAGCCTGCACCAACTCCGTGATTCCACTTTTTCCGCAGTTATTGCCGGCGCATCACCCTCAAGCCGCTGAGAACAACGCTTCCACCTCAAGAAAGCGTCACAAAGCTTTGGAACCCAGCGATGGCGCACAGAGGAAGGGAAGAGCGAAGAGGAAGAAGATGACCGAGAGTTTCGACGTTCTTCACTCTCTCGTGCCGAATATCTCTCCCAAGGCTACGAGGGAGAAAATCGTTACGGAGACGATCCAGTTCATCCAGTTTCTGCAGAAGCAGTTGGTGAGGCTGGAAATGGAGAAGAAGCCAGTGGAATCGGTGAAATCGGATTCATCCGGCGACGTCGTCGTCTCGGTCTCCGGCAACATCGTGTTGTTTGGGATTATTGCTTCTGTTCGACGAGGTATGGTGACACAGATTTTAATGGCGTTTGAGAGACACCAGGCTGAAGTTCTTGCAGCTAATGTTGCTGTTAACCATGGAAATTTAAGTTTATCAGTTACAGCTTCTGTACACGATTACGTTGAGAATACCATAGAGAAGATTAGAAACGATATCCTGAACTTAGAGAAGTAA

Coding sequence (CDS)

ATGGAAGCCTGCACCAACTCCGTGATTCCACTTTTTCCGCAGTTATTGCCGGCGCATCACCCTCAAGCCGCTGAGAACAACGCTTCCACCTCAAGAAAGCGTCACAAAGCTTTGGAACCCAGCGATGGCGCACAGAGGAAGGGAAGAGCGAAGAGGAAGAAGATGACCGAGAGTTTCGACGTTCTTCACTCTCTCGTGCCGAATATCTCTCCCAAGGCTACGAGGGAGAAAATCGTTACGGAGACGATCCAGTTCATCCAGTTTCTGCAGAAGCAGTTGGTGAGGCTGGAAATGGAGAAGAAGCCAGTGGAATCGGTGAAATCGGATTCATCCGGCGACGTCGTCGTCTCGGTCTCCGGCAACATCGTGTTGTTTGGGATTATTGCTTCTGTTCGACGAGGTATGGTGACACAGATTTTAATGGCGTTTGAGAGACACCAGGCTGAAGTTCTTGCAGCTAATGTTGCTGTTAACCATGGAAATTTAAGTTTATCAGTTACAGCTTCTGTACACGATTACGTTGAGAATACCATAGAGAAGATTAGAAACGATATCCTGAACTTAGAGAAGTAA

Protein sequence

MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFDVLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESVKSDSSGDVVVSVSGNIVLFGIIASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTASVHDYVENTIEKIRNDILNLEK

Homology

[Close]

BLAST of Sed0011065 vs. NCBI nr
Match: XP_022955986.1 (uncharacterized protein LOC111457820 [Cucurbita moschata] >XP_022956015.1 uncharacterized protein LOC111457838 isoform X1 [Cucurbita moschata])

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 150/198 (75.76%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEACT+SV+ L P +LP H  +AAEN ASTSRKR +ALE + G QRKGR KRK+M+ESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDS-SGD 120
           VL SLVPN+SPKATRE IV+ETIQFI+ LQKQL+RLEMEKKP+ESV       SDS  G 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 VVVSVSGNIVLFGII-ASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTASVHD 180
           V+VSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAV+HGNL+L+VTASVH 
Sbjct: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180

Query: 181 YVENTIEKIRNDILNLEK 191
           YVENTIE+IRNDIL+L+K
Sbjct: 181 YVENTIEQIRNDILSLKK 198

[Close]

BLAST of Sed0011065 vs. NCBI nr
Match: KAG6582238.1 (Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018637.1 Transcription factor bHLH95 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 150/198 (75.76%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEACT+SV+ L P +LP H  +AAEN ASTSRKR +ALE + G QRKGR KRK+M+ESFD
Sbjct: 1   MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDS-SGD 120
           VL SLVPN+SPKATRE IV+ETIQFI+ LQKQL+RLEMEKKP+ESV       SDS  G 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 VVVSVSGNIVLFGII-ASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTASVHD 180
           V+VSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAV+HGNL+L+VTASVH 
Sbjct: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180

Query: 181 YVENTIEKIRNDILNLEK 191
           YVENTIE+IRNDIL+L+K
Sbjct: 181 YVENTIEQIRNDILSLKK 198

[Close]

BLAST of Sed0011065 vs. NCBI nr
Match: XP_023528352.1 (uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 8.5e-67
Identity = 149/201 (74.13%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEACT+SV+ L P +LP H  +AAEN ASTSRKR +ALE + G QRKGR KRK+M+ESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDS---- 120
           VL SLVPN+SPKATRE IV+ETIQFI+ LQKQL RLEMEKKP+ESV       SDS    
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLTRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 SGDVVVSVSGNIVLFGII-ASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTAS 180
            G V+VSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAV+HGNL+L+VTAS
Sbjct: 121 DGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS 180

Query: 181 VHDYVENTIEKIRNDILNLEK 191
           +H YVENTIE+IRNDIL+L+K
Sbjct: 181 IHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of Sed0011065 vs. NCBI nr
Match: XP_022979931.1 (uncharacterized protein LOC111479473 [Cucurbita maxima])

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-66
Identity = 149/203 (73.40%), Postives = 170/203 (83.74%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEACT+SV+ L P +LP H  +AAEN ASTSRKR +ALE + G QRKGR KRK+M+ESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRWRALEANGGEQRKGREKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDS---- 120
           VL SLVPN+SPKATRE IV+ETIQFI+ LQKQL+RLEMEKKP+ESV       SDS    
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGD 120

Query: 121 --SGDVVVSVSGNIVLFGII-ASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVT 180
              G V+VSVS NIVLFGII ASVRRGMVT+ILMAFERHQAEVLAANVAV+HGNL+L+VT
Sbjct: 121 GGDGGVIVSVSSNIVLFGIIFASVRRGMVTRILMAFERHQAEVLAANVAVSHGNLTLTVT 180

Query: 181 ASVHDYVENTIEKIRNDILNLEK 191
           ASVH YVENTIE+IRNDIL+L+K
Sbjct: 181 ASVHGYVENTIEQIRNDILSLKK 203

[Close]

BLAST of Sed0011065 vs. NCBI nr
Match: XP_038885840.1 (transcription factor bHLH95-like [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-64
Identity = 146/201 (72.64%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEACT+SV+PLFP +LP H  +A E  AS SRKR +ALE + G Q+K R KRK+M+ESFD
Sbjct: 1   MEACTDSVVPLFPLILPVHQSEATEKKASASRKRIRALEANGGVQKKEREKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDSS--- 120
           VL SLVPN+SPKATRE IV+ETIQFI+FLQKQL+RLEMEKK  ESV       SDSS   
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEFLQKQLMRLEMEKKSSESVTMLPSTNSDSSGGG 120

Query: 121 -GDVVVSVSGNIVLFG-IIASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTAS 180
            G V+VSVSGNIVLFG IIASV+RGMVTQILM FERHQAEVLAANVAV+HGNL+L+VTAS
Sbjct: 121 GGGVIVSVSGNIVLFGIIIASVQRGMVTQILMVFERHQAEVLAANVAVSHGNLTLTVTAS 180

Query: 181 VHDYVENTIEKIRNDILNLEK 191
           VH YVENTIE I+NDIL+L+K
Sbjct: 181 VHGYVENTIELIKNDILSLKK 201

[Close]

BLAST of Sed0011065 vs. ExPASy TrEMBL
Match: A0A6J1GWN9 (uncharacterized protein LOC111457820 OS=Cucurbita moschata OX=3662 GN=LOC111457838 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 150/198 (75.76%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEACT+SV+ L P +LP H  +AAEN ASTSRKR +ALE + G QRKGR KRK+M+ESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDS-SGD 120
           VL SLVPN+SPKATRE IV+ETIQFI+ LQKQL+RLEMEKKP+ESV       SDS  G 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 VVVSVSGNIVLFGII-ASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTASVHD 180
           V+VSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAV+HGNL+L+VTASVH 
Sbjct: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180

Query: 181 YVENTIEKIRNDILNLEK 191
           YVENTIE+IRNDIL+L+K
Sbjct: 181 YVENTIEQIRNDILSLKK 198

[Close]

BLAST of Sed0011065 vs. ExPASy TrEMBL
Match: A0A6J1IS55 (uncharacterized protein LOC111479473 OS=Cucurbita maxima OX=3661 GN=LOC111479473 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.7e-66
Identity = 149/203 (73.40%), Postives = 170/203 (83.74%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEACT+SV+ L P +LP H  +AAEN ASTSRKR +ALE + G QRKGR KRK+M+ESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRWRALEANGGEQRKGREKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDS---- 120
           VL SLVPN+SPKATRE IV+ETIQFI+ LQKQL+RLEMEKKP+ESV       SDS    
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGD 120

Query: 121 --SGDVVVSVSGNIVLFGII-ASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVT 180
              G V+VSVS NIVLFGII ASVRRGMVT+ILMAFERHQAEVLAANVAV+HGNL+L+VT
Sbjct: 121 GGDGGVIVSVSSNIVLFGIIFASVRRGMVTRILMAFERHQAEVLAANVAVSHGNLTLTVT 180

Query: 181 ASVHDYVENTIEKIRNDILNLEK 191
           ASVH YVENTIE+IRNDIL+L+K
Sbjct: 181 ASVHGYVENTIEQIRNDILSLKK 203

[Close]

BLAST of Sed0011065 vs. ExPASy TrEMBL
Match: A0A5A7U767 (Transcription factor bHLH95-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00480 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.9e-62
Identity = 139/201 (69.15%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEAC++SV+PLFP +LP HH +A E  AS SRKR +ALE + G Q+K + KRK+M+ESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDSSG-- 120
           VL SLVPN+SPKATRE IV+  IQFI+FLQKQL+RLEMEKK  ESV       SDSSG  
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGGN 120

Query: 121 --DVVVSVSGNIVLFG-IIASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTAS 180
              V+VS+SGNIVLFG IIASV+RGMVTQIL+ FERH+ EVLAANV V+HGNL+L+VTAS
Sbjct: 121 GDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTAS 180

Query: 181 VHDYVENTIEKIRNDILNLEK 191
           VH YVENTIE+IRNDIL+L+K
Sbjct: 181 VHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of Sed0011065 vs. ExPASy TrEMBL
Match: A0A0A0L5R7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151510 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.9e-62
Identity = 140/202 (69.31%), Postives = 165/202 (81.68%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEAC++SVIPLFP +LP HH +A E  AS SRKR +ALE + G Q+K + KRK+M+ESFD
Sbjct: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDSSG-- 120
           VL SLVPN+SPKATRE IV+  IQFI+FLQKQL+RLEMEKK  ESV       SDSSG  
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120

Query: 121 ---DVVVSVSGNIVLFG-IIASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTA 180
               V+VS+SGNIVLFG IIASV+RG+VTQIL+ FERH+AEVLAANV V+HGNL+L+VTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHDYVENTIEKIRNDILNLEK 191
           SVH YVENTIE+IRNDIL L+K
Sbjct: 181 SVHGYVENTIEQIRNDILGLKK 202

[Close]

BLAST of Sed0011065 vs. ExPASy TrEMBL
Match: A0A1S4DSM0 (transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103483801 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.9e-62
Identity = 139/201 (69.15%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   MEACTNSVIPLFPQLLPAHHPQAAENNASTSRKRHKALEPSDGAQRKGRAKRKKMTESFD 60
           MEAC++SV+PLFP +LP HH +A E  AS SRKR +ALE + G Q+K + KRK+M+ESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLHSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEKKPVESV------KSDSSG-- 120
           VL SLVPN+SPKATRE IV+  IQFI+FLQKQL+RLEMEKK  ESV       SDSSG  
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGGN 120

Query: 121 --DVVVSVSGNIVLFG-IIASVRRGMVTQILMAFERHQAEVLAANVAVNHGNLSLSVTAS 180
              V+VS+SGNIVLFG IIASV+RGMVTQIL+ FERH+ EVLAANV V+HGNL+L+VTAS
Sbjct: 121 GDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTAS 180

Query: 181 VHDYVENTIEKIRNDILNLEK 191
           VH YVENTIE+IRNDIL+L+K
Sbjct: 181 VHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of Sed0011065 vs. TAIR 10
Match: AT1G49770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 9.8e-05
Identity = 33/98 (33.67%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 16  LPAH--HPQAAENNASTSRKRHKALEPSDGAQRK-----------GRAKRKKMTESFDVL 75
           LP+H  HP + E   +T +K  K  + +D    +            R +RKKM + F  L
Sbjct: 34  LPSHPSHP-SPEIQTTTVKKGKKRTKRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKL 93

Query: 76  HSLVPNISPKATREKIVTETIQFIQFLQKQLVRLEMEK 101
           H+L+P + PKA +  IV E +  I+ L++ L +LEM+K
Sbjct: 94  HALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQK 130

The following BLAST results are available for this feature:

BLAST of Sed0011065 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955986.1	2.2e-67	75.76	uncharacterized protein LOC111457820 [Cucurbita moschata] >XP_022956015.1 unchar...	[more]
KAG6582238.1	2.2e-67	75.76	Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma ...	[more]
XP_023528352.1	8.5e-67	74.13	uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo]	[more]
XP_022979931.1	5.5e-66	73.40	uncharacterized protein LOC111479473 [Cucurbita maxima]	[more]
XP_038885840.1	2.3e-64	72.64	transcription factor bHLH95-like [Benincasa hispida]	[more]

BLAST of Sed0011065 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0011065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWN9	1.1e-67	75.76	uncharacterized protein LOC111457820 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]
A0A6J1IS55	2.7e-66	73.40	uncharacterized protein LOC111479473 OS=Cucurbita maxima OX=3661 GN=LOC111479473...	[more]
A0A5A7U767	8.9e-62	69.15	Transcription factor bHLH95-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0L5R7	8.9e-62	69.31	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151510 PE=4 S...	[more]
A0A1S4DSM0	8.9e-62	69.15	transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103483801 PE=4 SV...	[more]

BLAST of Sed0011065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49770.1	9.8e-05	33.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 26..110 e-value: 3.4E-8 score: 35.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 49..101
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 49..90 e-value: 2.3E-4 score: 21.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 39..89 score: 9.616458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..46
None	No IPR available	PANTHER	PTHR31945:SF53	HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN	coord: 7..186
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 7..186
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 49..97 e-value: 2.10654E-9 score: 49.4872

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011065.1	Sed0011065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding