Sed0011055 (gene) Chayote v1

Overview


Name	Sed0011055
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nuclear transcription factor Y subunit B
Location	LG07: 39930068 .. 39934672 (-)
RNA-Seq Expression	Sed0011055
Synteny	Sed0011055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTCCCATAATTAGTAAAATAAAGAATGAAAAAGAAATAAAAGCCTGGTTGGTTTCTCATCTTCATCTTCTTGGTTTCTCCAGCGTCCGATCTTTGATTCTTTAAAAATCAAAATTTGGACCAATCCCCCATCTCCGTTTCTTTCTCTAAATTCCTCTGCGCGCCAAATACGAATTCATTCTTCAGGTACTTTCTCTCTCTTCTCTTTCCATTCCATTTCCATGGCTGCCGGACTTAGGGTTTCGGATCCAGGAACTCCCTCACATGGCAGAGCTTCCCACCAGTCCGGCCGAGAGCGGCGGCGACCAGAGCCCCAACACCGGCGCCGGCTCCGGCGGCGTTCGCGAGCAGGATCGTTACCTCCCCATCGCCAACATCAGTCGGATCATGAAGAAGGCCTTGCCTGCCAACGGCAAGATCGCTAAGGACGCTAAGGACACCGTCCAGGAGTGCGTCTCTGAGTTCATTAGCTTCATCACCAGCGAGTGCGTTTCTCTTTCTCATCTTTCTTTTTTGCTTCTTTTGGCTTTTTTTGTTGATCTGCGTTTGTTTTTGTTGTTGTTTGTGTGTGTGTGTAGGGCGAGTGATAAGTGCCAGAAGGAGAAGAGGAAGACTATTAATGGCGATGATTTGCTTTGGGCGATGGCTACGTTGGGCTTCGAGGATTTTATCGATCCCCTTAAGTCCTACCTTACTAGGTACAGAGAGGTAATATTCTTTCTTATCTTTTGCTCCTGAATGGTTCTGTAATTGTTGTGGACGTCCATGAGTAAAGCTATTTTACTTTTGTTTATATGTGACTGTCCGGTTCAGTTTAAGCACACCTCTAATATTGTCGGTTAACATACCGTCTCGTCCTACAACATTTGAATGTCAAGAAAACTGGTAGGAAATTGTAAGGTACCCAACCTAGTGGTATATTAGCAATAAGGGTATTGTAAGGGTAGAAGGGTGAAATTAGAGAGAAACACTAGGCTCAACCCTAGAAATCCCTCCCTCTTGATTATGCTAACCCAAGCCAAGACTCTCCAAATACATCGATATCTTTCTCCCCACTCCTCTACTCCTATTTATACCCCTTCACCAACTAACTCTCTGTTATATTACCCTTCTACCCTTACAATACCCCTATTACTAATATACCCCTAAGTTGGGCGTGTTACAGAAATTAATTCGTAGGTAGGTGATCACATTGTATTGGACCCATAATTTCTTAATTACTTAAGACATTCTCGACCACTAGGTCACTCCAATGGTTTGAGTAAAGCAATTAGAGTTCTTCTCACAATTTCTATTACTTATTGTGAATCGTTTGAGCTTTGAGAGTGCTTCAGTCGATTAAATGGTTAAACTTTTCTCGGTTGATCCGGAGATGTTTATGTATATCTTGACATTTTGAATAAATTTGTTCGGTTTCTTTTTAACAAGGCTATTTAATTGTTTGATCTCATCACTACGATGTGCTCACTTTTTTTTTTTGCCTGTTTTCTTCTCTTTGTTGGTGTGGCCTGGGGGCAATGGTGTTGCTACAGTTGGAGGTAATTAAAACCAGCTCTTAAACTTCGTATTCTATTGGTTTATTGTACCCCACCCCCTGACTCTAATCTAAGCTTTCTTTGGGAGCGATGTATGTGATGAGCTTTTCTGTTAAAATATGAACTTTTCCAGTGTGATGCTAAAGGATCTTCTAGGGGTGGTGACGAATCTGCTAAAAGAGACGCCGTCGGGGCCTTGCCTGGTCAAAATTCCCAGGTTTAGTTACTTCCCATACAATCTTGCTTTCAACTTCTTACAGAGAGATTTTAATTATTTTCATGGTGACATGGATTGAATTTTTTTTTTTCTTTATCATGTAATTTTCTTAACATCTTTTGTGTATATATATGCAGCAGTACCTGCAGCATGGAGCAATGACCTACATTAACACTCAAGTAATAATCTCTCTTCTCTCAACTTGCCAGCATGATATTGAAGAATGCCCTCCTTTTTATTGCTAATAATTGGATTGATGTTTATGGTTATTATTAGCTTTTTTCTATTACCAGTATTTTCTTTAATTTATTGAGTGTTGCGTAGGAGATGGACCTGTTTATTCTCTTTCCTTCTTTTATATATATATAACCTTTGTTTTTGATACAATGTTTGCTTGTCAAGAAGCTCGTAGAATTTCATCATGGTTAGTGGTGGTCACTGTGGAGATTGAATCCATTTCTCCAAAATCCACTTTGTTTTTCCTCGTGCCCAACATCACTAGGCCAATGGCAGCTTATATTTAATTGATATACTTTTAATGTTTAGAAGAAGATATATTATTAAATAAGTAAATAAAACTTGATTATTCTACCATTCAAATAGTCCCCATAGTCAAGACTCGAGACAAATTTCCTTACATTTTTTTCACATAGGAATTTCTTGACGTATCTTAATGTATCTTATAGTTTGGTTGTTCAGAAAAGAAGATTCCATGGTCTTGAAAATTTGTCTGCACAAAGATACGTTTCACCTGGAACAATATCCTACACCTAGCATAAAATTGTCTGAGATCTTTGGTGATCTGCTCTTTGATGAATGCCTAGAAGATTTTCATGTTATGGCGGTTGTGTAACATTGATAATGTAATGGTGGTTAAATGCATAGTTTGGAACAATTTTGCATAGTGTCTTTGTTTTATTTTGTTGTAAACTTTGGCTTTCAATTTAATAAAATGGAAATACAAACAGAAGATGGATGAAATCCCTTAATTCATCCCAAATACATCAAAAGAACTACACAAATAAAGGTCCAGTTATAAGTAAACTCACCAACTATTAGGACAATTACAAACAGTCCAGAGCGGTACAAGACTTTAAATAGAGACCTTTATAAGGAGGATAAATTATTATGAGTAGCTACCACGATGTGGTTGTTACTTGTTTCTCACATGACCATCAAATGCGTGTTCAAAAAAACATTTCTTCAATCTCTCAATCATGCATATAACGGGATCGGCGGATTGAACTCCTATCAACCAAGAGTCTTCCTCTTACCTATGAAAGCAAGGGCTCCCTTCAAGTCTTCCAAACCTCCTATATGCCCTGCTCTTTTTGTGCTCTTTCATTCTTTTCTCAATAAAAAGCTTGTTATCATAATTAAAAAAAAAAAAAAAGCCTTCCAAACCTGTTCTTACCGGCTATATTTGGGCACAAGACTACAAAAGATTGGAAAAAATATATGCCAAGCTTACTAAAACATAATTTAGTGAAGAGGGCTTTCCTTTGTATCAATTAGGTTGTACAGGTCAGATATCCGGATTGAGCCTGCCTCTGGAACCAAACTTGGAGAAATTTTCTTTCCTTACCCACTTTCAATTACTTTTTTTCCCTGGACTCAAAGAACTTTCTTAATCAACTTTTAATTTGATTTCTCATTGATGCAGTTATTATGAATTTATGATGACATAATCTACTACCTTAGAACCAGGGTATCCTAAAGGTTATGAGTACAAATCTTCCACATGGCGGTATTCATGAACAAATATCTCATGCGTACCCTTTTTTGGTGTGAAAAATTATGGGATCAGGACAGTAGTCTCTTGATAAAATAGGCGGAAGTCTGTACAGGCATCAAAATGGGCTTCAATGAAAAGAAGTGTTAAAATATGGAAAATTAGTGGGTTTTGATCCTTAGCTTTTAATTCCCATCTAATCTTCAACAAGTTCTTTGAAATTAAGTAATCATGTAGTAGATTGTCAATTTCTTATTTTATTTTATCCGATGCTCTACTTGTTGCCTTTTTGTGGTTTTGCATTTAAATTTGTCCAAATATATTGCATCTTTATACATCCGTTTCTTTAGAAAATTATGATATATCCTGGAGGTTAGATGTGTCGTCTGATGAATAATATTAATTACAGTCATGTTAACACACACACATATACGTCCCCAAGGGGTAGCGCAGTGGTTGAAGACTTGAGCTTTGAGGATATGCTGTCCTCATGGTTCCAGGTTCGAGACTCAGACATTACTCCTTCGATGTCTTCTGTGCCTAGCCTAGGGATGGGCGTGGTTACATTGTTTCAAAAAAACACACACACATATACACTAGAAGTTAGAGTGGGATTTTGATGATATTTTTGCTGAATCGGTGATTTTTATTAACTTCCTATGTTTGTAGGGACAACATTTGATCATTCCTTCAATGCAGAATAACGAGTAGGAGTCTCCTCCATTCACTTGGATTGCCTGAAATCTGAGGCTGGTAGAAGCGTTCAACACCTACATAGCATCTTTACAATTGATTTGGCTAATTTACTATGAGATGATGGTATTATATATATGTGTGTGTGTGTGTGTGTATTTCTGGGGGTTTCTGTGTTGGGTCTGGATTTGATTTTGGTTTGAGTTGGGCTTTAAGATGGGCTTCGCTTTCGTTGAATCTGTCAGCTAAAGTTATTGTAAATTTGGGACCTTCAAATTAGTAATTGGAAACTGGAAATATTGTTCTCTTTCTCACTTCTGTTTCTTTTGGTTTTGAATGATTAAGAAAATGATTCATATACCCTCTCCCTCCCTTTTATCATTATTTGGCTTTCTACTCTCTCCACCCATACAAATCTTAGAAGCA

mRNA sequence

AAATTCCCATAATTAGTAAAATAAAGAATGAAAAAGAAATAAAAGCCTGGTTGGTTTCTCATCTTCATCTTCTTGGTTTCTCCAGCGTCCGATCTTTGATTCTTTAAAAATCAAAATTTGGACCAATCCCCCATCTCCGTTTCTTTCTCTAAATTCCTCTGCGCGCCAAATACGAATTCATTCTTCAGGAACTCCCTCACATGGCAGAGCTTCCCACCAGTCCGGCCGAGAGCGGCGGCGACCAGAGCCCCAACACCGGCGCCGGCTCCGGCGGCGTTCGCGAGCAGGATCGTTACCTCCCCATCGCCAACATCAGTCGGATCATGAAGAAGGCCTTGCCTGCCAACGGCAAGATCGCTAAGGACGCTAAGGACACCGTCCAGGAGTGCGTCTCTGAGTTCATTAGCTTCATCACCAGCGAGGCGAGTGATAAGTGCCAGAAGGAGAAGAGGAAGACTATTAATGGCGATGATTTGCTTTGGGCGATGGCTACGTTGGGCTTCGAGGATTTTATCGATCCCCTTAAGTCCTACCTTACTAGGTACAGAGAGTTGGAGTGTGATGCTAAAGGATCTTCTAGGGGTGGTGACGAATCTGCTAAAAGAGACGCCGTCGGGGCCTTGCCTGGTCAAAATTCCCAGCAGTACCTGCAGCATGGAGCAATGACCTACATTAACACTCAAGGACAACATTTGATCATTCCTTCAATGCAGAATAACGAGTAGGAGTCTCCTCCATTCACTTGGATTGCCTGAAATCTGAGGCTGGTAGAAGCGTTCAACACCTACATAGCATCTTTACAATTGATTTGGCTAATTTACTATGAGATGATGGTATTATATATATGTGTGTGTGTGTGTGTGTATTTCTGGGGGTTTCTGTGTTGGGTCTGGATTTGATTTTGGTTTGAGTTGGGCTTTAAGATGGGCTTCGCTTTCGTTGAATCTGTCAGCTAAAGTTATTGTAAATTTGGGACCTTCAAATTAGTAATTGGAAACTGGAAATATTGTTCTCTTTCTCACTTCTGTTTCTTTTGGTTTTGAATGATTAAGAAAATGATTCATATACCCTCTCCCTCCCTTTTATCATTATTTGGCTTTCTACTCTCTCCACCCATACAAATCTTAGAAGCA

Coding sequence (CDS)

ATGGCAGAGCTTCCCACCAGTCCGGCCGAGAGCGGCGGCGACCAGAGCCCCAACACCGGCGCCGGCTCCGGCGGCGTTCGCGAGCAGGATCGTTACCTCCCCATCGCCAACATCAGTCGGATCATGAAGAAGGCCTTGCCTGCCAACGGCAAGATCGCTAAGGACGCTAAGGACACCGTCCAGGAGTGCGTCTCTGAGTTCATTAGCTTCATCACCAGCGAGGCGAGTGATAAGTGCCAGAAGGAGAAGAGGAAGACTATTAATGGCGATGATTTGCTTTGGGCGATGGCTACGTTGGGCTTCGAGGATTTTATCGATCCCCTTAAGTCCTACCTTACTAGGTACAGAGAGTTGGAGTGTGATGCTAAAGGATCTTCTAGGGGTGGTGACGAATCTGCTAAAAGAGACGCCGTCGGGGCCTTGCCTGGTCAAAATTCCCAGCAGTACCTGCAGCATGGAGCAATGACCTACATTAACACTCAAGGACAACATTTGATCATTCCTTCAATGCAGAATAACGAGTAG

Protein sequence

MAELPTSPAESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

Homology

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BLAST of Sed0011055 vs. NCBI nr
Match: XP_022138908.1 (nuclear transcription factor Y subunit B-1-like isoform X1 [Momordica charantia] >XP_022138909.1 nuclear transcription factor Y subunit B-1-like isoform X1 [Momordica charantia])

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 165/178 (92.70%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDA
Sbjct: 1   MAEAPTSPAGGSHESGGEQSPNT----GGVREQDRYLPIANISRIMKKALPANGKIAKDA 60

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFED+IDPLKSYLTRYR
Sbjct: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYR 120

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
           ELECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GAMTYINTQGQHLIIPSMQNNE
Sbjct: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYMQPGAMTYINTQGQHLIIPSMQNNE 174

[Close]

BLAST of Sed0011055 vs. NCBI nr
Match: XP_038891399.1 (nuclear transcription factor Y subunit B-1-like [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 8.5e-82
Identity = 160/178 (89.89%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSPA    ESGG+QSPNT    GGVREQDR+LPIANISRIMKKALPANGKIAKDA
Sbjct: 1   MAEPPTSPAGGSHESGGEQSPNT----GGVREQDRFLPIANISRIMKKALPANGKIAKDA 60

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISF+TSEASDKCQKEKRKTINGDDLLWAMATLGFE++IDPLKSYLTRYR
Sbjct: 61  KDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLTRYR 120

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
           ELECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GA+TYINTQGQH+IIPSMQNNE
Sbjct: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYMQPGALTYINTQGQHMIIPSMQNNE 174

[Close]

BLAST of Sed0011055 vs. NCBI nr
Match: XP_022138910.1 (nuclear transcription factor Y subunit B-1-like isoform X2 [Momordica charantia])

HSP 1 Score: 313.9 bits (803), Expect = 8.5e-82
Identity = 164/178 (92.13%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDA
Sbjct: 1   MAEAPTSPAGGSHESGGEQSPNT----GGVREQDRYLPIANISRIMKKALPANGKIAKDA 60

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFED+IDPLKSYLTRYR
Sbjct: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYR 120

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
           ELECDAKGSSRGGDESAKRDAVGALPGQNS QY+Q GAMTYINTQGQHLIIPSMQNNE
Sbjct: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNS-QYMQPGAMTYINTQGQHLIIPSMQNNE 173

[Close]

BLAST of Sed0011055 vs. NCBI nr
Match: XP_022138911.1 (nuclear transcription factor Y subunit B-1-like isoform X3 [Momordica charantia])

HSP 1 Score: 311.6 bits (797), Expect = 4.2e-81
Identity = 163/178 (91.57%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDA
Sbjct: 1   MAEAPTSPAGGSHESGGEQSPNT----GGVREQDRYLPIANISRIMKKALPANGKIAKDA 60

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFED+IDPLKSYLTRYR
Sbjct: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYR 120

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
             ECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GAMTYINTQGQHLIIPSMQNNE
Sbjct: 121 --ECDAKGSSRGGDESAKRDAVGALPGQNSQQYMQPGAMTYINTQGQHLIIPSMQNNE 172

[Close]

BLAST of Sed0011055 vs. NCBI nr
Match: XP_022957208.1 (nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita moschata] >XP_023532936.1 nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.4 bits (786), Expect = 8.0e-80
Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSP     ESGG+QSP T    GG REQDR+LPIANISRIMKKALPANGKIAKDA
Sbjct: 12  MAEPPTSPPGGSHESGGEQSPIT----GGAREQDRFLPIANISRIMKKALPANGKIAKDA 71

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISF+TSEASDKCQKEKRKTINGDDLLWAMATLGFE++IDPLKSYLTRYR
Sbjct: 72  KDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLTRYR 131

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
           ELECDAKGSSRGGDESAKRDAVGA+PGQNSQQY+Q GA+TYINTQGQHLIIPSMQNNE
Sbjct: 132 ELECDAKGSSRGGDESAKRDAVGAMPGQNSQQYMQSGALTYINTQGQHLIIPSMQNNE 185

[Close]

BLAST of Sed0011055 vs. ExPASy Swiss-Prot
Match: Q67XJ2 (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-53
Identity = 113/163 (69.33%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 10  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFIS 69
           ESGGDQSP     S  VREQDR+LPIANISRIMK+ LP NGKIAKDAK+T+QECVSEFIS
Sbjct: 15  ESGGDQSPR----SLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFIS 74

Query: 70  FITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGG 129
           F+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+IDPLK YL RYRE+E D KGS +GG
Sbjct: 75  FVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGG 134

Query: 130 DESAKRDAVGALPGQNSQ--QYLQHGAMT---YINTQGQHLII 168
           + SAKRD     P Q SQ  Q  Q G+ +   Y N+QG ++++
Sbjct: 135 ESSAKRD---GQPSQVSQFSQVPQQGSFSQGPYGNSQGSNMMV 170

[Close]

BLAST of Sed0011055 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-53
Identity = 111/170 (65.29%), Postives = 129/170 (75.88%), Query Frame = 0


Query: 1   MAELPTSPAESGGDQ---SPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAK 60
           MAE P SP   GG     SP  G G G VREQDR+LPIANISRIMKKA+PANGKIAKDAK
Sbjct: 1   MAEAPASPGGGGGSHESGSPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAK 60

Query: 61  DTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRE 120
           +TVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFED+I+PLK YL +YRE
Sbjct: 61  ETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYRE 120

Query: 121 LECDAKGSSRGGDESAKRDAVGALPGQNS------QQYLQHGAMTYINTQ 162
           +E D+K +++  D S K+DA+G +   +S      QQ   +  M Y+  Q
Sbjct: 121 MEGDSKLTAKSSDGSIKKDALGHVGASSSAAEGMGQQGAYNQGMGYMQPQ 170

[Close]

BLAST of Sed0011055 vs. ExPASy Swiss-Prot
Match: Q8VYK4 (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.9e-53
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 10  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFIS 69
           ESGGDQSP     S  VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFIS
Sbjct: 16  ESGGDQSPR----SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFIS 75

Query: 70  FITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGG 129
           F+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+++PLK YL RYRE+E D KGS++GG
Sbjct: 76  FVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGG 135

Query: 130 DESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP 169
           D +AK+D   +  GQ SQ  L H    Y N+Q  QH+++P
Sbjct: 136 DPNAKKDGQSSQNGQFSQ--LAHQG-PYGNSQAQQHMMVP 168

[Close]

BLAST of Sed0011055 vs. ExPASy Swiss-Prot
Match: Q9SLG0 (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NFYB1 PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 2.5e-52
Identity = 107/144 (74.31%), Postives = 117/144 (81.25%), Query Frame = 0


Query: 1   MAELPTSPAESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTV 60
           MA+ P+SPA  GG+         G VREQDRYLPIANISRIMKKALP NGKI KDAKDTV
Sbjct: 1   MADTPSSPAGDGGE-------SGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTV 60

Query: 61  QECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELEC 120
           QECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFED+++PLK YL RYRELE 
Sbjct: 61  QECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEG 120

Query: 121 DAKGSSRGGDESAKRDAVGALPGQ 145
           D KGS + GD S  RDA G + G+
Sbjct: 121 DNKGSGKSGDGS-NRDAGGGVSGE 136

[Close]

BLAST of Sed0011055 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 3.3e-52
Identity = 110/177 (62.15%), Postives = 130/177 (73.45%), Query Frame = 0


Query: 1   MAELPTSPAESGGDQSPNT----------GAGSGGVREQDRYLPIANISRIMKKALPANG 60
           MA+ P SP   GG     +          G G GGVREQDR+LPIANISRIMKKA+PANG
Sbjct: 1   MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANG 60

Query: 61  KIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKS 120
           KIAKDAK+TVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFED+I+PLK 
Sbjct: 61  KIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKV 120

Query: 121 YLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNS------QQYLQHGAMTYINTQ 162
           YL +YRE+E D+K +++ GD S K+D +G+  G +S      QQ   +  M Y+  Q
Sbjct: 121 YLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQ 177

[Close]

BLAST of Sed0011055 vs. ExPASy TrEMBL
Match: A0A6J1CEF2 (nuclear transcription factor Y subunit B-1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009975 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.8e-84
Identity = 165/178 (92.70%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDA
Sbjct: 1   MAEAPTSPAGGSHESGGEQSPNT----GGVREQDRYLPIANISRIMKKALPANGKIAKDA 60

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFED+IDPLKSYLTRYR
Sbjct: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYR 120

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
           ELECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GAMTYINTQGQHLIIPSMQNNE
Sbjct: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYMQPGAMTYINTQGQHLIIPSMQNNE 174

[Close]

BLAST of Sed0011055 vs. ExPASy TrEMBL
Match: A0A6J1CAU0 (nuclear transcription factor Y subunit B-1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009975 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.1e-82
Identity = 164/178 (92.13%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDA
Sbjct: 1   MAEAPTSPAGGSHESGGEQSPNT----GGVREQDRYLPIANISRIMKKALPANGKIAKDA 60

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFED+IDPLKSYLTRYR
Sbjct: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYR 120

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
           ELECDAKGSSRGGDESAKRDAVGALPGQNS QY+Q GAMTYINTQGQHLIIPSMQNNE
Sbjct: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNS-QYMQPGAMTYINTQGQHLIIPSMQNNE 173

[Close]

BLAST of Sed0011055 vs. ExPASy TrEMBL
Match: A0A6J1CB30 (nuclear transcription factor Y subunit B-1-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111009975 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.1e-81
Identity = 163/178 (91.57%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDA
Sbjct: 1   MAEAPTSPAGGSHESGGEQSPNT----GGVREQDRYLPIANISRIMKKALPANGKIAKDA 60

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFED+IDPLKSYLTRYR
Sbjct: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYR 120

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
             ECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GAMTYINTQGQHLIIPSMQNNE
Sbjct: 121 --ECDAKGSSRGGDESAKRDAVGALPGQNSQQYMQPGAMTYINTQGQHLIIPSMQNNE 172

[Close]

BLAST of Sed0011055 vs. ExPASy TrEMBL
Match: A0A6J1KDC7 (nuclear transcription factor Y subunit B-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493865 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.9e-80
Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSP     ESGG+QSP T    GG REQDR+LPIANISRIMKKALPANGKIAKDA
Sbjct: 12  MAEPPTSPPGGSHESGGEQSPIT----GGAREQDRFLPIANISRIMKKALPANGKIAKDA 71

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISF+TSEASDKCQKEKRKTINGDDLLWAMATLGFE++IDPLKSYLTRYR
Sbjct: 72  KDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLTRYR 131

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
           ELECDAKGSSRGGDESAKRDAVGA+PGQNSQQY+Q GA+TYINTQGQHLIIPSMQNNE
Sbjct: 132 ELECDAKGSSRGGDESAKRDAVGAMPGQNSQQYMQSGALTYINTQGQHLIIPSMQNNE 185

[Close]

BLAST of Sed0011055 vs. ExPASy TrEMBL
Match: A0A6J1KK09 (nuclear transcription factor Y subunit B-1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493865 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.9e-80
Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDA 60
           MAE PTSP     ESGG+QSP T    GG REQDR+LPIANISRIMKKALPANGKIAKDA
Sbjct: 1   MAEPPTSPPGGSHESGGEQSPIT----GGAREQDRFLPIANISRIMKKALPANGKIAKDA 60

Query: 61  KDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYR 120
           KDTVQECVSEFISF+TSEASDKCQKEKRKTINGDDLLWAMATLGFE++IDPLKSYLTRYR
Sbjct: 61  KDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLTRYR 120

Query: 121 ELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE 175
           ELECDAKGSSRGGDESAKRDAVGA+PGQNSQQY+Q GA+TYINTQGQHLIIPSMQNNE
Sbjct: 121 ELECDAKGSSRGGDESAKRDAVGAMPGQNSQQYMQSGALTYINTQGQHLIIPSMQNNE 174

[Close]

BLAST of Sed0011055 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 209.5 bits (532), Expect = 2.1e-54
Identity = 113/163 (69.33%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 10  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFIS 69
           ESGGDQSP     S  VREQDR+LPIANISRIMK+ LP NGKIAKDAK+T+QECVSEFIS
Sbjct: 15  ESGGDQSPR----SLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFIS 74

Query: 70  FITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGG 129
           F+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+IDPLK YL RYRE+E D KGS +GG
Sbjct: 75  FVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGG 134

Query: 130 DESAKRDAVGALPGQNSQ--QYLQHGAMT---YINTQGQHLII 168
           + SAKRD     P Q SQ  Q  Q G+ +   Y N+QG ++++
Sbjct: 135 ESSAKRD---GQPSQVSQFSQVPQQGSFSQGPYGNSQGSNMMV 170

[Close]

BLAST of Sed0011055 vs. TAIR 10
Match: AT2G37060.1 (nuclear factor Y, subunit B8 )

HSP 1 Score: 209.1 bits (531), Expect = 2.8e-54
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 10  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFIS 69
           ESGGDQSP     S  VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFIS
Sbjct: 16  ESGGDQSPR----SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFIS 75

Query: 70  FITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGG 129
           F+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+++PLK YL RYRE+E D KGS++GG
Sbjct: 76  FVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGG 135

Query: 130 DESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP 169
           D +AK+D   +  GQ SQ  L H    Y N+Q  QH+++P
Sbjct: 136 DPNAKKDGQSSQNGQFSQ--LAHQG-PYGNSQAQQHMMVP 168

[Close]

BLAST of Sed0011055 vs. TAIR 10
Match: AT2G37060.2 (nuclear factor Y, subunit B8 )

HSP 1 Score: 209.1 bits (531), Expect = 2.8e-54
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 10  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFIS 69
           ESGGDQSP     S  VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFIS
Sbjct: 16  ESGGDQSPR----SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFIS 75

Query: 70  FITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGG 129
           F+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+++PLK YL RYRE+E D KGS++GG
Sbjct: 76  FVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGG 135

Query: 130 DESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP 169
           D +AK+D   +  GQ SQ  L H    Y N+Q  QH+++P
Sbjct: 136 DPNAKKDGQSSQNGQFSQ--LAHQG-PYGNSQAQQHMMVP 168

[Close]

BLAST of Sed0011055 vs. TAIR 10
Match: AT2G37060.3 (nuclear factor Y, subunit B8 )

HSP 1 Score: 209.1 bits (531), Expect = 2.8e-54
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 10  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFIS 69
           ESGGDQSP     S  VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFIS
Sbjct: 16  ESGGDQSPR----SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFIS 75

Query: 70  FITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGG 129
           F+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+++PLK YL RYRE+E D KGS++GG
Sbjct: 76  FVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGG 135

Query: 130 DESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP 169
           D +AK+D   +  GQ SQ  L H    Y N+Q  QH+++P
Sbjct: 136 DPNAKKDGQSSQNGQFSQ--LAHQG-PYGNSQAQQHMMVP 168

[Close]

BLAST of Sed0011055 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-53
Identity = 107/144 (74.31%), Postives = 117/144 (81.25%), Query Frame = 0


Query: 1   MAELPTSPAESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTV 60
           MA+ P+SPA  GG+         G VREQDRYLPIANISRIMKKALP NGKI KDAKDTV
Sbjct: 1   MADTPSSPAGDGGE-------SGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTV 60

Query: 61  QECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKSYLTRYRELEC 120
           QECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFED+++PLK YL RYRELE 
Sbjct: 61  QECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEG 120

Query: 121 DAKGSSRGGDESAKRDAVGALPGQ 145
           D KGS + GD S  RDA G + G+
Sbjct: 121 DNKGSGKSGDGS-NRDAGGGVSGE 136

The following BLAST results are available for this feature:

BLAST of Sed0011055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138908.1	1.2e-83	92.70	nuclear transcription factor Y subunit B-1-like isoform X1 [Momordica charantia]...	[more]
XP_038891399.1	8.5e-82	89.89	nuclear transcription factor Y subunit B-1-like [Benincasa hispida]	[more]
XP_022138910.1	8.5e-82	92.13	nuclear transcription factor Y subunit B-1-like isoform X2 [Momordica charantia]	[more]
XP_022138911.1	4.2e-81	91.57	nuclear transcription factor Y subunit B-1-like isoform X3 [Momordica charantia]	[more]
XP_022957208.1	8.0e-80	88.20	nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita moschata] ...	[more]

BLAST of Sed0011055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XJ2	3.0e-53	69.33	Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
P25209	3.0e-53	65.29	Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1	[more]
Q8VYK4	3.9e-53	70.00	Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SLG0	2.5e-52	74.31	Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q60EQ4	3.3e-52	62.15	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Sed0011055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEF2	5.8e-84	92.70	nuclear transcription factor Y subunit B-1-like isoform X1 OS=Momordica charanti...	[more]
A0A6J1CAU0	4.1e-82	92.13	nuclear transcription factor Y subunit B-1-like isoform X2 OS=Momordica charanti...	[more]
A0A6J1CB30	2.1e-81	91.57	nuclear transcription factor Y subunit B-1-like isoform X3 OS=Momordica charanti...	[more]
A0A6J1KDC7	3.9e-80	88.20	nuclear transcription factor Y subunit B-1-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1KK09	3.9e-80	88.20	nuclear transcription factor Y subunit B-1-like isoform X3 OS=Cucurbita maxima O...	[more]

BLAST of Sed0011055 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53340.1	2.1e-54	69.33	nuclear factor Y, subunit B10	[more]
AT2G37060.1	2.8e-54	70.00	nuclear factor Y, subunit B8	[more]
AT2G37060.2	2.8e-54	70.00	nuclear factor Y, subunit B8	[more]
AT2G37060.3	2.8e-54	70.00	nuclear factor Y, subunit B8	[more]
AT2G38880.2	1.8e-53	74.31	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 60..78 score: 54.07 coord: 98..116 score: 33.61 coord: 79..97 score: 39.35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR11064:SF134	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED	coord: 1..155
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 32..96 e-value: 5.6E-28 score: 97.0
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 22..153 e-value: 1.9E-46 score: 159.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 29..131
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..155
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 63..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011055.1	Sed0011055.1	mRNA
Sed0011055.2	Sed0011055.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding