Sed0011023 (gene) Chayote v1

Overview


Name	Sed0011023
Type	gene
Organism	Sechium edule (Chayote v1)
Description	15.4 kDa class V heat shock protein
Location	LG01: 10729873 .. 10730622 (-)
RNA-Seq Expression	Sed0011023
Synteny	Sed0011023

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACTTGCCAAAATATCCAGTGGTCTATTTAAAGCTTGGAAGGGCGTCGTTAAAACCCTATCTGCTCTGATTGGCCCCGCCAAAACCCGCCAACACCAAAATCATTCATCCCTTTCTGAAAGCATCAACAATGGAGATTTCAATCTCAAATTCAGCATCCTTCCAGGCCTCATTTCTTCCTCTTCTCCACCTTCCCCACTACCATTACGCCGTTCCTCGGAACAACGTGCAGTGGATTCGAACTCCCCATTCTCACGTCTTCGCCGCCGATCTCCCAGGTACGCTTCCGATTTTCCAATCCATTTCTCGATCTCGATCTCTCACTTGCCAGATCTACGCGCAGGTGTTCGGAAGGAGGAGATTAAAGTGGAGGTCGAAGATTCGCGGTACCTAATCATCCGAACAGAGGCCGTGGCTGTGGATGGATCGGTTACTGCGCCGGCGAAGAGCTTCTCGAGGAAGTTTCGGCTTCCGGTTTTGGTGGATGTGGATGCCATTTTGGCTGGATTCGTGGACGGCGTTTTGGAGATTACGGTGCCGAGATCCTTCAGAACTGCCTCCTCTGTTCTTCTGCCGGTCCATTCCTCCGACGATCGGCTTCGACTGCTCGCTAGGGCTGCTTGATTGGGATTCCGAACTCACCCCATCCATCCTTTCGATTTTATCTTTTCTGAATCAGAAATCATGTAACATTTTAGGTAAAAATTGTAAGTCAATTTTAAATTATCTGCATAATCATTAATACTGC

mRNA sequence

CTCAACTTGCCAAAATATCCAGTGGTCTATTTAAAGCTTGGAAGGGCGTCGTTAAAACCCTATCTGCTCTGATTGGCCCCGCCAAAACCCGCCAACACCAAAATCATTCATCCCTTTCTGAAAGCATCAACAATGGAGATTTCAATCTCAAATTCAGCATCCTTCCAGGCCTCATTTCTTCCTCTTCTCCACCTTCCCCACTACCATTACGCCGTTCCTCGGAACAACGTGCAGTGGATTCGAACTCCCCATTCTCACGTCTTCGCCGCCGATCTCCCAGGTGTTCGGAAGGAGGAGATTAAAGTGGAGGTCGAAGATTCGCGGTACCTAATCATCCGAACAGAGGCCGTGGCTGTGGATGGATCGGTTACTGCGCCGGCGAAGAGCTTCTCGAGGAAGTTTCGGCTTCCGGTTTTGGTGGATGTGGATGCCATTTTGGCTGGATTCGTGGACGGCGTTTTGGAGATTACGGTGCCGAGATCCTTCAGAACTGCCTCCTCTGTTCTTCTGCCGGTCCATTCCTCCGACGATCGGCTTCGACTGCTCGCTAGGGCTGCTTGATTGGGATTCCGAACTCACCCCATCCATCCTTTCGATTTTATCTTTTCTGAATCAGAAATCATGTAACATTTTAGGTAAAAATTGTAAGTCAATTTTAAATTATCTGCATAATCATTAATACTGC

Coding sequence (CDS)

ATGGAGATTTCAATCTCAAATTCAGCATCCTTCCAGGCCTCATTTCTTCCTCTTCTCCACCTTCCCCACTACCATTACGCCGTTCCTCGGAACAACGTGCAGTGGATTCGAACTCCCCATTCTCACGTCTTCGCCGCCGATCTCCCAGGTGTTCGGAAGGAGGAGATTAAAGTGGAGGTCGAAGATTCGCGGTACCTAATCATCCGAACAGAGGCCGTGGCTGTGGATGGATCGGTTACTGCGCCGGCGAAGAGCTTCTCGAGGAAGTTTCGGCTTCCGGTTTTGGTGGATGTGGATGCCATTTTGGCTGGATTCGTGGACGGCGTTTTGGAGATTACGGTGCCGAGATCCTTCAGAACTGCCTCCTCTGTTCTTCTGCCGGTCCATTCCTCCGACGATCGGCTTCGACTGCTCGCTAGGGCTGCTTGA

Protein sequence

MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRTASSVLLPVHSSDDRLRLLARAA

Homology

[Close]

BLAST of Sed0011023 vs. NCBI nr
Match: XP_022933175.1 (15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kDa class V heat shock protein [Cucurbita pepo subsp. pepo] >KAG6584081.1 15.4 kDa class V heat shock protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019683.1 15.4 kDa class V heat shock protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177.9 bits (450), Expect = 6.0e-41
Identity = 101/142 (71.13%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 1   MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEV 60
           MEIS S+ AS   S  P L  P+YHYAVP+N V W +T  SHVF+ADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRT 120
           EDSRYLIIRT+  AVDG VT PAKSFSRKFRLPVLVDVDAI AGF +GVLEITVPRS RT
Sbjct: 61  EDSRYLIIRTQ--AVDG-VTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRT 120

Query: 121 ASSVLLPVHSSDDRLRLLARAA 143
            S  ++    S D+L+LLARAA
Sbjct: 121 RS--VIHQTDSSDQLQLLARAA 137

[Close]

BLAST of Sed0011023 vs. NCBI nr
Match: XP_038894889.1 (15.4 kDa class V heat shock protein [Benincasa hispida])

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40
Identity = 98/142 (69.01%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEV 60
           MEIS SN +S   SF P L  P++HY +P N V W++T  SH+F+ADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHNSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRT 120
           EDSRYLIIRTE  AVDG VT PAKSFSRKFRLPVL+DVD I AGF +GVLEITVPRSFR 
Sbjct: 61  EDSRYLIIRTE--AVDG-VTVPAKSFSRKFRLPVLIDVDGISAGFENGVLEITVPRSFRR 120

Query: 121 ASSVLLPVHSSDDRLRLLARAA 143
           +S     V  S D+L+LLARAA
Sbjct: 121 SS-----VIHSPDQLQLLARAA 134

[Close]

BLAST of Sed0011023 vs. NCBI nr
Match: XP_023001317.1 (15.4 kDa class V heat shock protein [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-40
Identity = 103/144 (71.53%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 1   MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEV 60
           MEIS S+ AS   S  P L  P+YHYAVP+N V W +T  SHVF+ADLPGVRKEEIKVEV
Sbjct: 1   MEISTSH-ASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRT 120
           EDSRYLIIRT+  AVDG VT PAKSFSRKFRLPVLVDVDAI AGF +GVLEITVPRSFRT
Sbjct: 61  EDSRYLIIRTQ--AVDG-VTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRT 120

Query: 121 ASSVLLPVHSSD--DRLRLLARAA 143
            S     +H +D  D+L+LLARAA
Sbjct: 121 RS----VIHQTDSPDQLQLLARAA 136

[Close]

BLAST of Sed0011023 vs. NCBI nr
Match: XP_022140087.1 (15.4 kDa class V heat shock protein [Momordica charantia])

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-40
Identity = 100/140 (71.43%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 3   ISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEVED 62
           + ISN  S +  F P L  P+YHYA+P+N V W++TP SH+F+ADLPGVRKEEIKVEVED
Sbjct: 26  MEISNRPSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVED 85

Query: 63  SRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRTAS 122
           SRYLIIRTE  AVDG V   AKSFSRKFRLPVLVDVDAI AGF +GVLEITVPRSFR A 
Sbjct: 86  SRYLIIRTE--AVDG-VEELAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRA- 145

Query: 123 SVLLPVHSSDDRLRLLARAA 143
           SV+LP   S D+L+LLARAA
Sbjct: 146 SVILPT-DSPDQLQLLARAA 160

[Close]

BLAST of Sed0011023 vs. NCBI nr
Match: ADU55781.1 (HSP15 [Citrullus lanatus])

HSP 1 Score: 175.3 bits (443), Expect = 3.9e-40
Identity = 99/142 (69.72%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEV 60
           MEIS SN +S   SF P L  P++HY +P N V W++T  SH+F+ADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRT 120
           EDSRYLIIRTE  AVDG VT PAKSFSRKFRLPVLVDVDAI AGF +GVLEITVPRSFR 
Sbjct: 61  EDSRYLIIRTE--AVDG-VTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRR 120

Query: 121 ASSVLLPVHSSDDRLRLLARAA 143
           +S     +HS D   +LLARAA
Sbjct: 121 SS----VIHSPD---QLLARAA 132

[Close]

BLAST of Sed0011023 vs. ExPASy Swiss-Prot
Match: O49710 (15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.9e-22
Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 31  NNVQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLIIRTEAVAVDGSVTAPAKSFSRKF 90
           N+V+W ++P SH F+ DLPG+RKEEIKVE+EDS YLIIRTEA  +      P K+F RKF
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPM-SPPDQPLKTFKRKF 85

Query: 91  RLPVLVDVDAILAGFVDGVLEITVPRSFRTASSVLLPVHSSDDRLRLLARAA 143
           RLP  +D+  I AG+ DGVL + VP+   T    L+      + L+LLARAA
Sbjct: 86  RLPESIDMIGISAGYEDGVLTVIVPKRIMTRR--LIDPSDVPESLQLLARAA 134

[Close]

BLAST of Sed0011023 vs. ExPASy Swiss-Prot
Match: Q7EZ57 (18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP18.8 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.5e-18
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 31  NNVQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLIIRTE---AVAVDGSVTAPAKSFS 90
           ++V W  T  +H+++A LPGVRKEEI+VEVED+ YL+IRTE       DG      +SF+
Sbjct: 55  SHVSWEETAAAHLYSASLPGVRKEEIRVEVEDAMYLVIRTELDDGGDGDGGGGGGRRSFA 114

Query: 91  RKFRLPVLVDVDAILAGFVDGVLEITVPRSFRTASSVL 126
           RKFRLP +VD D I A +  GVL +TVPR    A  V+
Sbjct: 115 RKFRLPAMVDADGISAEYTHGVLRVTVPRLHTRARPVV 152

[Close]

BLAST of Sed0011023 vs. ExPASy Swiss-Prot
Match: Q05832 (18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.2e-13
Identity = 48/120 (40.00%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 17  PLLHLPHYHYAVPRN------------NVQWIRTPHSHVFAADLPGVRKEEIKVEVEDSR 76
           P   LP     VPR+             + W  TP +HVF ADLPGV+KEE+KVEVED  
Sbjct: 29  PFFGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGN 88

Query: 77  YLII-------RTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRS 118
            L I       + E       V   +  F RKFRLP    VD + AG  +GVL +TVP++
Sbjct: 89  VLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPKN 148

[Close]

BLAST of Sed0011023 vs. ExPASy Swiss-Prot
Match: P27777 (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.5e-13
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 33  VQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLIIRTEAVAVDGS-------VTAPAKS 92
           + W  TP SHVF ADLPGV+KEE+KVEVE+   L+I  +              V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 93  FSRKFRLPVLVDVDAILAGFVDGVLEITVPRS 118
           F R+FRLP    VD + AG  +GVL +TVP++
Sbjct: 105 FMRRFRLPENAKVDQVKAGLENGVLTVTVPKA 136

[Close]

BLAST of Sed0011023 vs. ExPASy Swiss-Prot
Match: Q943E6 (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.5e-13
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 33  VQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLIIRTEAVAVDGS-------VTAPAKS 92
           + W  TP SHVF ADLPGV+KEE+KVEVE+   L+I  +              V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 93  FSRKFRLPVLVDVDAILAGFVDGVLEITVPRS 118
           F R+FRLP    VD + AG  +GVL +TVP++
Sbjct: 105 FMRRFRLPENAKVDQVKAGMENGVLTVTVPKA 136

[Close]

BLAST of Sed0011023 vs. ExPASy TrEMBL
Match: A0A6J1F477 (15.4 kDa class V heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC111440034 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.9e-41
Identity = 101/142 (71.13%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 1   MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEV 60
           MEIS S+ AS   S  P L  P+YHYAVP+N V W +T  SHVF+ADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRT 120
           EDSRYLIIRT+  AVDG VT PAKSFSRKFRLPVLVDVDAI AGF +GVLEITVPRS RT
Sbjct: 61  EDSRYLIIRTQ--AVDG-VTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRT 120

Query: 121 ASSVLLPVHSSDDRLRLLARAA 143
            S  ++    S D+L+LLARAA
Sbjct: 121 RS--VIHQTDSSDQLQLLARAA 137

[Close]

BLAST of Sed0011023 vs. ExPASy TrEMBL
Match: A0A6J1KG72 (15.4 kDa class V heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111495481 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 103/144 (71.53%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 1   MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEV 60
           MEIS S+ AS   S  P L  P+YHYAVP+N V W +T  SHVF+ADLPGVRKEEIKVEV
Sbjct: 1   MEISTSH-ASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRT 120
           EDSRYLIIRT+  AVDG VT PAKSFSRKFRLPVLVDVDAI AGF +GVLEITVPRSFRT
Sbjct: 61  EDSRYLIIRTQ--AVDG-VTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRT 120

Query: 121 ASSVLLPVHSSD--DRLRLLARAA 143
            S     +H +D  D+L+LLARAA
Sbjct: 121 RS----VIHQTDSPDQLQLLARAA 136

[Close]

BLAST of Sed0011023 vs. ExPASy TrEMBL
Match: A0A6J1CFU3 (15.4 kDa class V heat shock protein OS=Momordica charantia OX=3673 GN=LOC111010826 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.4e-40
Identity = 100/140 (71.43%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 3   ISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEVED 62
           + ISN  S +  F P L  P+YHYA+P+N V W++TP SH+F+ADLPGVRKEEIKVEVED
Sbjct: 26  MEISNRPSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVED 85

Query: 63  SRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRTAS 122
           SRYLIIRTE  AVDG V   AKSFSRKFRLPVLVDVDAI AGF +GVLEITVPRSFR A 
Sbjct: 86  SRYLIIRTE--AVDG-VEELAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRA- 145

Query: 123 SVLLPVHSSDDRLRLLARAA 143
           SV+LP   S D+L+LLARAA
Sbjct: 146 SVILPT-DSPDQLQLLARAA 160

[Close]

BLAST of Sed0011023 vs. ExPASy TrEMBL
Match: H6TB34 (HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.9e-40
Identity = 99/142 (69.72%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEV 60
           MEIS SN +S   SF P L  P++HY +P N V W++T  SH+F+ADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRSFRT 120
           EDSRYLIIRTE  AVDG VT PAKSFSRKFRLPVLVDVDAI AGF +GVLEITVPRSFR 
Sbjct: 61  EDSRYLIIRTE--AVDG-VTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRR 120

Query: 121 ASSVLLPVHSSDDRLRLLARAA 143
           +S     +HS D   +LLARAA
Sbjct: 121 SS----VIHSPD---QLLARAA 132

[Close]

BLAST of Sed0011023 vs. ExPASy TrEMBL
Match: A0A5D3BMI3 (15.4 kDa class V heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005860 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.3e-35
Identity = 95/143 (66.43%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 1   MEISISNSASFQASFLPLLHLPHYHYAVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEV 60
           MEISIS+         PLL  P+Y Y +P N V W++T  SH+F+ADLPGVRKEEIKVEV
Sbjct: 1   MEISISDPR-------PLL-FPYYRYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVAVDGSVTAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPR-SFR 120
           EDSRYLIIRTE  AVDG VT+PAKSFSRKFRLPV+VDVD I AGF +GVLEITVPR SFR
Sbjct: 61  EDSRYLIIRTE--AVDG-VTSPAKSFSRKFRLPVMVDVDGISAGFENGVLEITVPRSSFR 120

Query: 121 TASSVLLPVHSSDDRLRLLARAA 143
             +     V  S D+L+LLARAA
Sbjct: 121 RRA-----VAHSPDQLQLLARAA 127

[Close]

BLAST of Sed0011023 vs. TAIR 10
Match: AT4G21870.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-23
Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 31  NNVQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLIIRTEAVAVDGSVTAPAKSFSRKF 90
           N+V+W ++P SH F+ DLPG+RKEEIKVE+EDS YLIIRTEA  +      P K+F RKF
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPM-SPPDQPLKTFKRKF 85

Query: 91  RLPVLVDVDAILAGFVDGVLEITVPRSFRTASSVLLPVHSSDDRLRLLARAA 143
           RLP  +D+  I AG+ DGVL + VP+   T    L+      + L+LLARAA
Sbjct: 86  RLPESIDMIGISAGYEDGVLTVIVPKRIMTRR--LIDPSDVPESLQLLARAA 134

[Close]

BLAST of Sed0011023 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13
Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 27  AVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLII-------RTEAVAVDGSV 86
           A+    V W  T  +HVF ADLPG++KEE+KVE+ED   L I       + E       V
Sbjct: 42  AIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRV 101

Query: 87  TAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPR 117
              +  FSRKFRLP  V +D + A   +GVL +TVP+
Sbjct: 102 ERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPK 138

[Close]

BLAST of Sed0011023 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.3e-13
Identity = 40/97 (41.24%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 27  AVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLII-------RTEAVAVDGSV 86
           A+    V W  T  +HVF ADLPG++KEE+KVE+ED   L I       + E       V
Sbjct: 44  AITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRV 103

Query: 87  TAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPR 117
              +  FSRKF+LP  V +D + A   +GVL +TVP+
Sbjct: 104 ERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPK 140

[Close]

BLAST of Sed0011023 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.3e-13
Identity = 39/98 (39.80%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 27  AVPRNNVQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLIIRTEAVAVDGS-------V 86
           A+    V W  TP +HVF ADLPG++KEE+KVE+E+   L I  E              V
Sbjct: 42  AIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRV 101

Query: 87  TAPAKSFSRKFRLPVLVDVDAILAGFVDGVLEITVPRS 118
              +  F+R+FRLP  V +D + A   +GVL +TVP++
Sbjct: 102 ERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKA 139

[Close]

BLAST of Sed0011023 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 5.6e-13
Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 33  VQWIRTPHSHVFAADLPGVRKEEIKVEVEDSRYLIIRTEAVAVDGS-------VTAPAKS 92
           V W  TP +HVF ADLPG+RKEE+KVEVED   L I  E    +         V   +  
Sbjct: 52  VDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGK 111

Query: 93  FSRKFRLPVLVDVDAILAGFVDGVLEITVPR 117
           F+R+FRLP    ++ I A   +GVL +TVP+
Sbjct: 112 FTRRFRLPENAKMEEIKASMENGVLSVTVPK 142

The following BLAST results are available for this feature:

BLAST of Sed0011023 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933175.1	6.0e-41	71.13	15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kD...	[more]
XP_038894889.1	1.3e-40	69.01	15.4 kDa class V heat shock protein [Benincasa hispida]	[more]
XP_023001317.1	2.3e-40	71.53	15.4 kDa class V heat shock protein [Cucurbita maxima]	[more]
XP_022140087.1	3.0e-40	71.43	15.4 kDa class V heat shock protein [Momordica charantia]	[more]
ADU55781.1	3.9e-40	69.72	HSP15 [Citrullus lanatus]	[more]

BLAST of Sed0011023 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49710	2.9e-22	51.79	15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 P...	[more]
Q7EZ57	2.5e-18	50.00	18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q05832	3.2e-13	40.00	18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1	[more]
P27777	5.5e-13	43.48	16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q943E6	5.5e-13	43.48	16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Sed0011023 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F477	2.9e-41	71.13	15.4 kDa class V heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC11144003...	[more]
A0A6J1KG72	1.1e-40	71.53	15.4 kDa class V heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111495481 ...	[more]
A0A6J1CFU3	1.4e-40	71.43	15.4 kDa class V heat shock protein OS=Momordica charantia OX=3673 GN=LOC1110108...	[more]
H6TB34	1.9e-40	69.72	HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5D3BMI3	5.3e-35	66.43	15.4 kDa class V heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Sed0011023 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21870.1	2.1e-23	51.79	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	1.9e-13	42.27	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	4.3e-13	41.24	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	4.3e-13	39.80	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	5.6e-13	43.96	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 35..118 e-value: 2.5E-15 score: 56.4
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 24..131 score: 18.544291
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 8..124 e-value: 5.6E-21 score: 76.8
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 14..117
None	No IPR available	PANTHER	PTHR11527:SF97	15.4 KDA CLASS V HEAT SHOCK PROTEIN	coord: 1..141
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011023.1	Sed0011023.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding