Homology
BLAST of Sed0011014 vs. NCBI nr
Match:
XP_022154411.1 (mediator of RNA polymerase II transcription subunit 15a [Momordica charantia])
HSP 1 Score: 1969.9 bits (5102), Expect = 0.0e+00
Identity = 1168/1377 (84.82%), Postives = 1236/1377 (89.76%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MDT+NWRP QGGEP ++SGDWRSQLQ DSRQRIVNKIMETLKRHLPVSG+EGLSEL+KIA
Sbjct: 1 MDTSNWRPPQGGEPPLDSGDWRSQLQNDSRQRIVNKIMETLKRHLPVSGNEGLSELRKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIY AATSQSDYLRKISLKMLTMETKSQ+ MGN LPSNS+VP NKPLD+ SQSM
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQS-SMGNPLPSNSMVPSNKPLDTASQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLSS--------QSSSSLSSAVSPVSGLASASMPN 180
Q +NQ VP+SSNQPQSRQQLLS QSSSSL SAV PV+GLA +SMP
Sbjct: 121 PSQAINQS---TVPLSSNQPQSRQQLLSQNIQNTIAPQSSSSLPSAVPPVTGLAPSSMPT 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVSQQQQQQSQTQQQQL 240
+VGQ+ +MQ+VSGV+QN VGN++GQGVPSNVF NSQRPIQGRQVVSQQQQQQSQ+QQQ L
Sbjct: 181 MVGQSSSMQSVSGVSQN-VGNTVGQGVPSNVFPNSQRPIQGRQVVSQQQQQQSQSQQQYL 240
Query: 241 FLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTS----- 300
+ Q QLQQQ++KQK+Q GS+ HQLMQ HMSQQQQNL+ PNQLQSSQQ VLQTS
Sbjct: 241 Y---QHQLQQQLIKQKYQQGSMSHQLMQPHMSQQQQNLIQPNQLQSSQQSVLQTSSVMQP 300
Query: 301 SVMQPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPT 360
SVMQPSLSNLQQ+QQSPIQQPTQSMLQQPSQPVLRQ QQS H +HQQP+MPQQT LP+
Sbjct: 301 SVMQPSLSNLQQSQQSPIQQPTQSMLQQPSQPVLRQQQQSQPHAAMHQQPTMPQQTMLPS 360
Query: 361 QQQQQLIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPSQQQH 420
QQQQQLIS QPNSSNMQQN LIGQQ+S+GDMQQQL QQSRSHGQQSNLSNMQ PPSQQQ
Sbjct: 361 QQQQQLISQQPNSSNMQQNSLIGQQSSLGDMQQQLPQQSRSHGQQSNLSNMQSPPSQQQQ 420
Query: 421 QLMAPQSNLSNL---QQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQ 480
QLM Q+NLSNL QQQQLGPQSNVSGL QQQ+HG QSGNSNMQ+NQH VHML QNK Q
Sbjct: 421 QLMTQQNNLSNLQQQQQQQLGPQSNVSGL-QQQIHGTQSGNSNMQTNQHSVHMLHQNKVQ 480
Query: 481 M-QQTPQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPL-QQQQPPNTMSHELQ 540
M QQ P NTSNLLSTQGQQGQLQ SQQLMSQIPLQSTQVQQQVPL QQQQPPN MSHELQ
Sbjct: 481 MQQQPPPNTSNLLSTQGQQGQLQPSQQLMSQIPLQSTQVQQQVPLQQQQQPPNVMSHELQ 540
Query: 541 QRLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIY 600
QRLQ GQAP SLLQ QNVMDQ KQ+YH+Q ALPETSSTSLDSTAQTGQAN GDWQEEIY
Sbjct: 541 QRLQVSGQAPGSLLQPQNVMDQQKQVYHSQRALPETSSTSLDSTAQTGQANAGDWQEEIY 600
Query: 601 QKIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQ 660
QKIKAMK+LYF ELKEMYQKILPKL QFDS PQQPK EQLNKL+AFK ILERLL+FLQV
Sbjct: 601 QKIKAMKELYFFELKEMYQKILPKLNQFDSLPQQPKLEQLNKLKAFKSILERLLAFLQVP 660
Query: 661 KSSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQS 720
KS+IV+GFKDKI YE+QIVSFLNSNRPRN VSTLQPGQLPA+HM SIQQSQ QMT+LQS
Sbjct: 661 KSNIVLGFKDKIGHYEKQIVSFLNSNRPRNPVSTLQPGQLPASHMHSIQQSQSQMTSLQS 720
Query: 721 SENQINSQLHSASMQGSVAPVQQNNMNNMQHNSLSTFSGSAPQQNMMIPIQPGSNLESGQ 780
ENQINSQLHSA+MQ SVAPVQQNNMNNMQHNSLS+FSGSA QQNM P+QPGS LESGQ
Sbjct: 721 PENQINSQLHSANMQCSVAPVQQNNMNNMQHNSLSSFSGSAAQQNMTSPMQPGSGLESGQ 780
Query: 781 GNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPNMLQHQHLK 840
GNSLSSLQQVAAGSLQQN AN+SQRAN+SSL SQNGVN LQQNIS+LQSNPNMLQHQHLK
Sbjct: 781 GNSLSSLQQVAAGSLQQNPANTSQRANSSSLSSQNGVNPLQQNISALQSNPNMLQHQHLK 840
Query: 841 QQDPQQLMQS-QQLKQQLHQRHLQQMKQQIMQQ-QQQQQQPQLHQQQPQLHQQGKQQLST 900
QQDPQQLMQS QQLKQQL QRH+ Q+KQQ++QQ QQQQQQPQ HQQQ QLHQQGKQQL T
Sbjct: 841 QQDPQQLMQSPQQLKQQLQQRHIHQLKQQMLQQHQQQQQQPQSHQQQSQLHQQGKQQLPT 900
Query: 901 --QMQAHQMSHLNQM-EINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTSFPISP 960
QMQAHQMSHLN + EIND+KMRQGL KPGMFQ LPATQR Y+H Q+KPGTSFPISP
Sbjct: 901 QMQMQAHQMSHLNPINEINDLKMRQGLAVKPGMFQHLPATQRSAYSHPQLKPGTSFPISP 960
Query: 961 PIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPF-VPSPST-PLAPSPMPGDS 1020
PIFQAASPQV QNSSPQVDQQSLLSSI KTGTPLQSASSPF VPSPST P+APSP+PGDS
Sbjct: 961 PIFQAASPQVAQNSSPQVDQQSLLSSITKTGTPLQSASSPFVVPSPSTSPVAPSPIPGDS 1020
Query: 1021 EKP--TVSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTV 1080
EKP VSSL NAGNTGQQT+VSGTQA SLAIGTPGISASPLLAEFSGTDG Y NALPTV
Sbjct: 1021 EKPMSAVSSLTNAGNTGQQTSVSGTQAQSLAIGTPGISASPLLAEFSGTDGSYVNALPTV 1080
Query: 1081 SGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL 1140
SGKS+VTEQPLERLIK VKSM+PKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL
Sbjct: 1081 SGKSNVTEQPLERLIKAVKSMSPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL 1140
Query: 1141 VAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPSDLES 1200
VAMTKCRLQARNFVSHDG NGTKKMRRYTSAMPLNV SSAGSVNDVFK +E SDLES
Sbjct: 1141 VAMTKCRLQARNFVSHDGLNGTKKMRRYTSAMPLNVVSSAGSVNDVFKPLTGAETSDLES 1200
Query: 1201 TATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVKCS 1260
TATSSVKRPRVEA+HVLLEEIREINQRLIDTVVVISDEVVDPSALVAAA GSEGTIVKCS
Sbjct: 1201 TATSSVKRPRVEANHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAADGSEGTIVKCS 1260
Query: 1261 FSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK 1320
FSAVALSP+LKSQY SAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK
Sbjct: 1261 FSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK 1320
Query: 1321 SRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSTA 1346
SRFSISLRNLSQPMSLG+IARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS A
Sbjct: 1321 SRFSISLRNLSQPMSLGEIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSAA 1368
BLAST of Sed0011014 vs. NCBI nr
Match:
XP_022988664.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 1964.9 bits (5089), Expect = 0.0e+00
Identity = 1164/1381 (84.29%), Postives = 1225/1381 (88.70%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MD+NNWRP QGGE GV++GDWRSQLQPDSR RIVNKIMETLKRHLPVSGHEGLSEL+KIA
Sbjct: 1 MDSNNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQ +LPSNS+VP NKPLDSTSQSM
Sbjct: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQT----TALPSNSMVPTNKPLDSTSQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLS--------SQSSSSLSSAVSPVSGLASASMPN 180
Q QVLNQG M PMSSNQPQ RQQLLS SQSSSSL S+V PV+GLASA M N
Sbjct: 121 QSQVLNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMAN 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVS--QQQQQQSQTQQQ 240
IVGQNP+MQNVSGV Q+SVGN+MGQGV +NVF+NSQRPIQGRQVVS QQQQQQSQ+QQQ
Sbjct: 181 IVGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQ 240
Query: 241 QLFLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTSSVM 300
QLF QQQ LQQQIMKQKFQ GS+PHQLMQSH+ QQQ NLMPPNQLQSSQQ SVM
Sbjct: 241 QLFF-QQQHLQQQIMKQKFQQGSMPHQLMQSHIPQQQTNLMPPNQLQSSQQ------SVM 300
Query: 301 QPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPTQQQ 360
QPSLSNLQQNQQS IQQPTQSMLQQP QPVLRQ QQS QH VLHQQP+M QQ SL +QQQ
Sbjct: 301 QPSLSNLQQNQQSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQ 360
Query: 361 QQLIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPS------Q 420
QQLI+ Q NSSNMQQN LI QNSVGDMQQQL QQSRSHGQQSNLSNMQ PPS Q
Sbjct: 361 QQLINQQSNSSNMQQNSLI--QNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQ 420
Query: 421 QQHQLMAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQ 480
QQ QLM QS+LSNLQQ QLGPQSNVSGLQQQQMHG QSGNSNMQSNQH VHM+QQNK Q
Sbjct: 421 QQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQ 480
Query: 481 M-QQTPQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPLQQQQPPNTMSHELQQ 540
M QQ PQN SNLLSTQGQQGQLQSSQQLMSQIPLQS QVQQQV LQQQ NT+SHELQQ
Sbjct: 481 MQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQPQSNTLSHELQQ 540
Query: 541 RLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIYQ 600
RLQAGGQAP LLQ+QNVMDQ KQLYH Q LPETSSTSLDSTAQTGQANGGDWQEEIYQ
Sbjct: 541 RLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQ 600
Query: 601 KIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQK 660
KIK+MK+LY ELKEMYQKILPK+ QFDS PQQPKSEQLNKLRAF+ ILERL++FLQV K
Sbjct: 601 KIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPK 660
Query: 661 SSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQSS 720
++IV+GFKDKI YE+QIVSFLNSNRPRN VSTLQ GQLPA+HMQS+QQSQ QMT LQS
Sbjct: 661 NNIVIGFKDKIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSP 720
Query: 721 ENQINSQLHSASMQGSVAPVQQ---------NNMNNMQHNSLSTFSGSAPQQNMMIPIQP 780
ENQIN QLHSA+MQGSVAPVQQ NNMNNMQHNSL TFSGSAPQQNM IP+QP
Sbjct: 721 ENQINPQLHSANMQGSVAPVQQNNMNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQP 780
Query: 781 GSNLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPN 840
GS+LESGQGNSLSSLQQV A SLQQN ANSSQR NNSSL SQNGVN LQ NISSLQSN N
Sbjct: 781 GSSLESGQGNSLSSLQQVGAVSLQQNPANSSQRVNNSSLASQNGVNVLQPNISSLQSNTN 840
Query: 841 MLQHQHLKQQDPQQLMQS-QQLKQQLHQRHLQQMKQQIMQ-QQQQQQQPQLHQQQPQLHQ 900
+LQHQH+KQQDPQQL+QS QQLKQQ+ QRH+Q +KQQ++Q QQQQQQQPQLHQQQ QL Q
Sbjct: 841 ILQHQHMKQQDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQ 900
Query: 901 QGKQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTS 960
QGKQQL TQMQAHQMSHLNQ+EIND+KMRQG+ AKPGMFQ P TQR YTH QMKPGTS
Sbjct: 901 QGKQQLPTQMQAHQMSHLNQIEINDLKMRQGVAAKPGMFQH-PGTQRSAYTHPQMKPGTS 960
Query: 961 FPISPPIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPF-VPSPSTPLAPSPM 1020
FPISPPIFQA SPQVTQNSSPQVDQQ++ SS+ + GTPLQSASSPF VPSPSTPLAPSPM
Sbjct: 961 FPISPPIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPM 1020
Query: 1021 PGDSEKPT--VSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANA 1080
PGDSEKPT VSSLPNAGNTGQQ NVSG QAPSLAIGTPGISASPLLAEFSGTDG YA A
Sbjct: 1021 PGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIA 1080
Query: 1081 LPTVSGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAV 1140
LPTVSGKSS TEQPLERLIK VKSM+PKAL+ASVSGIGSVVSMIDRIAGSAPGNGSRAAV
Sbjct: 1081 LPTVSGKSSDTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAV 1140
Query: 1141 GEDLVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPS 1200
GEDLVAMTKCRLQARNFVSHDG NGTK+MRR+TSAMPLNV SSAGSVNDVFK +E S
Sbjct: 1141 GEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETS 1200
Query: 1201 DLESTATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTI 1260
DLESTATSSVKRPR+EASHVLLEEIREINQRLIDTVVVISDEVVDPSAL AAA GS+GTI
Sbjct: 1201 DLESTATSSVKRPRIEASHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAADGSDGTI 1260
Query: 1261 VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLS 1320
VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFP+EVSKEYEDLS
Sbjct: 1261 VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPIEVSKEYEDLS 1320
Query: 1321 IKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLST 1346
IKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS
Sbjct: 1321 IKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSA 1367
BLAST of Sed0011014 vs. NCBI nr
Match:
KAG7022562.1 (Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1961.8 bits (5081), Expect = 0.0e+00
Identity = 1164/1379 (84.41%), Postives = 1226/1379 (88.91%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MD++NWRP QGGE GV++GDWRSQLQPDSR RIVNKIMETLKRHLPVSGHEGLSEL+KIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIY AATSQSDYLRKISLKMLTMETKSQ +LPSNS+VP NKPLDSTSQSM
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQT----TALPSNSMVPTNKPLDSTSQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLS--------SQSSSSLSSAVSPVSGLASASMPN 180
Q QVLNQG M PMSSNQPQ RQQLLS SQSSSSL S+V PV+GLASA M N
Sbjct: 121 QSQVLNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMAN 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVS--QQQQQQSQTQQQ 240
IVGQNP+MQNVSGV Q+SVGN+MGQGV SNVF+NSQRPIQGRQVVS QQQQQQSQ+QQQ
Sbjct: 181 IVGQNPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQ 240
Query: 241 QLFLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTSSVM 300
QLF QQQ LQQQIMKQK+Q GS+PHQLMQSH+ QQQ NLM PNQL SSQQ SVM
Sbjct: 241 QLFF-QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQ------SVM 300
Query: 301 QPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPTQQQ 360
QPSLSNLQQNQQS IQQPTQSMLQQP QPVLRQ QQS QH VLHQQP+M QQ SL +QQQ
Sbjct: 301 QPSLSNLQQNQQSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQ 360
Query: 361 QQLIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPS-----QQ 420
QQLI+ Q NSSNMQQN LI QNSVGDMQQQL QQSRSHGQQSNLSNMQ PPS QQ
Sbjct: 361 QQLINQQSNSSNMQQNSLI--QNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQ 420
Query: 421 QHQLMAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQM 480
Q QLM QS+LSN+QQ QLGPQSNVSGLQQQQMHG QSGNSNMQSNQH VHM+QQNK QM
Sbjct: 421 QQQLMNQQSSLSNMQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQM 480
Query: 481 -QQTPQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPLQQQQPP--NTMSHELQ 540
QQ PQN SNLLSTQGQQGQLQSSQQLMSQIPLQS QVQQQV LQQQQ P NT+SHELQ
Sbjct: 481 QQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQPQSNTLSHELQ 540
Query: 541 QRLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIY 600
QRLQAGGQAP LLQ+QNVMDQ KQLYH Q LPETSSTSLDSTAQTGQANGGDWQEEIY
Sbjct: 541 QRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIY 600
Query: 601 QKIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQ 660
QKIK+MK+LY ELKEMYQKILPK+ QFDS PQQPKSEQLNKLRAF+ ILERL++FLQV
Sbjct: 601 QKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVP 660
Query: 661 KSSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQS 720
K++IV+GFKDKI YE+QIVSFLNSNRPRN VSTLQ GQLPA+HMQSIQQSQ QMT LQS
Sbjct: 661 KNNIVIGFKDKIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSIQQSQSQMTPLQS 720
Query: 721 SENQINSQLHSASMQGSVAPVQQ------NNMNNMQHNSLSTFSGSAPQQNMMIPIQPGS 780
ENQIN QLHSA+MQGSVAPVQQ NNMNNMQHNSL TFSGSAPQQNM IP+QPGS
Sbjct: 721 PENQINPQLHSANMQGSVAPVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGS 780
Query: 781 NLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPNML 840
+LESGQGNSLSSLQQV A SLQQN ANSSQRANNSSL SQNGVNALQ NISSLQSN N+L
Sbjct: 781 SLESGQGNSLSSLQQVGAVSLQQNPANSSQRANNSSLASQNGVNALQPNISSLQSNTNIL 840
Query: 841 QHQHLKQQDPQQLMQS-QQLKQQLHQRHLQQMKQQIMQ-QQQQQQQPQLHQQQPQLHQQG 900
QHQH+KQQDPQQL+QS QQLKQQ+ QRH+Q +KQQ++Q QQQQQQQPQLHQQQ QL QQG
Sbjct: 841 QHQHMKQQDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQG 900
Query: 901 KQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTSFP 960
KQQL TQMQAHQMSHLNQ+E+ND+KMRQG+ AKPGMFQ P TQR YTH QMKPGTSFP
Sbjct: 901 KQQLPTQMQAHQMSHLNQIEMNDLKMRQGVAAKPGMFQH-PGTQRSAYTHPQMKPGTSFP 960
Query: 961 ISPPIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPF-VPSPSTPLAPSPMPG 1020
ISPPIFQA SPQVTQNSSPQVDQQ++ SS+ + GTPLQSASSPF VPSPSTPLAPSPMPG
Sbjct: 961 ISPPIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPG 1020
Query: 1021 DSEKPT--VSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALP 1080
DSEKPT VSSLPNAGNTGQQ NVSG QAPSLAIGTPGISASPLLAEFSGTDG YA ALP
Sbjct: 1021 DSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALP 1080
Query: 1081 TVSGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGE 1140
TVSGKSSVTEQPLERLIK VKSM+PKAL+ASVSGIGSVVSMIDRIAGSAPGNGSRAAVGE
Sbjct: 1081 TVSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGE 1140
Query: 1141 DLVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPSDL 1200
DLVAMTKCRLQARNFVSHDG NGTK+MRR+TSAMPLNV SSAGSVNDVFK +E SDL
Sbjct: 1141 DLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDL 1200
Query: 1201 ESTATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVK 1260
ESTATSSVKRPR+EASHVLLEEIREINQRLIDTVVVISDEVVDPSAL AAA GS+GTIVK
Sbjct: 1201 ESTATSSVKRPRIEASHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAADGSDGTIVK 1260
Query: 1261 CSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIK 1320
CSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIK
Sbjct: 1261 CSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIK 1320
Query: 1321 AKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSTA 1346
AKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYG WENCLS A
Sbjct: 1321 AKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGTWENCLSAA 1365
BLAST of Sed0011014 vs. NCBI nr
Match:
XP_022988663.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1960.3 bits (5077), Expect = 0.0e+00
Identity = 1164/1382 (84.23%), Postives = 1225/1382 (88.64%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MD+NNWRP QGGE GV++GDWRSQLQPDSR RIVNKIMETLKRHLPVSGHEGLSEL+KIA
Sbjct: 1 MDSNNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQ +LPSNS+VP NKPLDSTSQSM
Sbjct: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQT----TALPSNSMVPTNKPLDSTSQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLS--------SQSSSSLSSAVSPVSGLASASMPN 180
Q QVLNQG M PMSSNQPQ RQQLLS SQSSSSL S+V PV+GLASA M N
Sbjct: 121 QSQVLNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMAN 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVS--QQQQQQSQTQQQ 240
IVGQNP+MQNVSGV Q+SVGN+MGQGV +NVF+NSQRPIQGRQVVS QQQQQQSQ+QQQ
Sbjct: 181 IVGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQ 240
Query: 241 QLFLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTSSVM 300
QLF QQQ LQQQIMKQKFQ GS+PHQLMQSH+ QQQ NLMPPNQLQSSQQ SVM
Sbjct: 241 QLFF-QQQHLQQQIMKQKFQQGSMPHQLMQSHIPQQQTNLMPPNQLQSSQQ------SVM 300
Query: 301 QPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPTQQQ 360
QPSLSNLQQNQQS IQQPTQSMLQQP QPVLRQ QQS QH VLHQQP+M QQ SL +QQQ
Sbjct: 301 QPSLSNLQQNQQSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQ 360
Query: 361 QQLIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPS------Q 420
QQLI+ Q NSSNMQQN LI QNSVGDMQQQL QQSRSHGQQSNLSNMQ PPS Q
Sbjct: 361 QQLINQQSNSSNMQQNSLI--QNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQ 420
Query: 421 QQHQLMAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQ 480
QQ QLM QS+LSNLQQ QLGPQSNVSGLQQQQMHG QSGNSNMQSNQH VHM+QQNK Q
Sbjct: 421 QQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQ 480
Query: 481 M-QQTPQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPLQQQQPPNTMSHELQQ 540
M QQ PQN SNLLSTQGQQGQLQSSQQLMSQIPLQS QVQQQV LQQQ NT+SHELQQ
Sbjct: 481 MQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQPQSNTLSHELQQ 540
Query: 541 RLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIYQ 600
RLQAGGQAP LLQ+QNVMDQ KQLYH Q LPETSSTSLDSTAQTGQANGGDWQEEIYQ
Sbjct: 541 RLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQ 600
Query: 601 KIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQK 660
KIK+MK+LY ELKEMYQKILPK+ QFDS PQQPKSEQLNKLRAF+ ILERL++FLQV K
Sbjct: 601 KIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPK 660
Query: 661 SSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQSS 720
++IV+GFKDKI YE+QIVSFLNSNRPRN VSTLQ GQLPA+HMQS+QQSQ QMT LQS
Sbjct: 661 NNIVIGFKDKIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSP 720
Query: 721 ENQINSQLHSASMQGSVAPVQQ---------NNMNNMQHNSLSTFSGSAPQQNMMIPIQP 780
ENQIN QLHSA+MQGSVAPVQQ NNMNNMQHNSL TFSGSAPQQNM IP+QP
Sbjct: 721 ENQINPQLHSANMQGSVAPVQQNNMNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQP 780
Query: 781 GSNLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPN 840
GS+LESGQGNSLSSLQQV A SLQQN ANSSQR NNSSL SQNGVN LQ NISSLQSN N
Sbjct: 781 GSSLESGQGNSLSSLQQVGAVSLQQNPANSSQRVNNSSLASQNGVNVLQPNISSLQSNTN 840
Query: 841 MLQHQHLKQQDPQQLMQS-QQLKQQLHQRHLQQMKQQIMQ-QQQQQQQPQLHQQQPQLHQ 900
+LQHQH+KQQDPQQL+QS QQLKQQ+ QRH+Q +KQQ++Q QQQQQQQPQLHQQQ QL Q
Sbjct: 841 ILQHQHMKQQDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQ 900
Query: 901 QGKQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTS 960
QGKQQL TQMQAHQMSHLNQ+EIND+KMRQG+ AKPGMFQ P TQR YTH QMKPGTS
Sbjct: 901 QGKQQLPTQMQAHQMSHLNQIEINDLKMRQGVAAKPGMFQH-PGTQRSAYTHPQMKPGTS 960
Query: 961 FPISPPIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPF-VPSPSTPLAPSPM 1020
FPISPPIFQA SPQVTQNSSPQVDQQ++ SS+ + GTPLQSASSPF VPSPSTPLAPSPM
Sbjct: 961 FPISPPIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPM 1020
Query: 1021 PGDSEKPT--VSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANA 1080
PGDSEKPT VSSLPNAGNTGQQ NVSG QAPSLAIGTPGISASPLLAEFSGTDG YA A
Sbjct: 1021 PGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIA 1080
Query: 1081 LPTVSGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAV 1140
LPTVSGKSS TEQPLERLIK VKSM+PKAL+ASVSGIGSVVSMIDRIAGSAPGNGSRAAV
Sbjct: 1081 LPTVSGKSSDTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAV 1140
Query: 1141 GEDLVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPS 1200
GEDLVAMTKCRLQARNFVSHDG NGTK+MRR+TSAMPLNV SSAGSVNDVFK +E S
Sbjct: 1141 GEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETS 1200
Query: 1201 DLESTATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTI 1260
DLESTATSSVKRPR+EASHVLLEEIREINQRLIDTVVVISDEVVDPSAL AAA GS+GTI
Sbjct: 1201 DLESTATSSVKRPRIEASHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAADGSDGTI 1260
Query: 1261 VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEV-SKEYEDL 1320
VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFP+EV SKEYEDL
Sbjct: 1261 VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPIEVSSKEYEDL 1320
Query: 1321 SIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS 1346
SIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS
Sbjct: 1321 SIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS 1368
BLAST of Sed0011014 vs. NCBI nr
Match:
XP_022967562.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1954.1 bits (5061), Expect = 0.0e+00
Identity = 1153/1368 (84.28%), Postives = 1212/1368 (88.60%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MDTNNWRPTQGGEPG+E GDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA
Sbjct: 1 MDTNNWRPTQGGEPGIEDGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIY AATSQSDYLRKISLKMLTMETKSQ PMG SLPSN +VP NKPLDS SQSM
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQT-PMGTSLPSNPMVPSNKPLDSASQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLS--------SQSSSSLSSAVSPVSGLASASMPN 180
QPQVLNQGQ + VP SNQPQSRQQLLS SQSSSSL SAV PVSGLAS+SMPN
Sbjct: 121 QPQVLNQGQSISVPQPSNQPQSRQQLLSQNIQNNIVSQSSSSLPSAVPPVSGLASSSMPN 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVSQQQQQQSQTQQQQL 240
+VGQNP+MQNVSG+ QNSVGNSMGQGVPSNVF+NSQRP+QGRQVVSQQQQQQ+QTQQQQ
Sbjct: 181 MVGQNPSMQNVSGIPQNSVGNSMGQGVPSNVFTNSQRPVQGRQVVSQQQQQQAQTQQQQ- 240
Query: 241 FLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTSSVMQP 300
FL QQQLQQQ+M +KFQ GSIP Q MQSH+ QQQQNLM PNQLQSSQQP +Q S+MQ
Sbjct: 241 FLFHQQQLQQQMMNKKFQQGSIPQQRMQSHIPQQQQNLMQPNQLQSSQQPAMQ-PSMMQS 300
Query: 301 SLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPTQQQQQ 360
SLSNLQQNQQS IQQPTQSMLQQP QPVLRQ QS QH V+H Q +M QQTSLP+QQQQQ
Sbjct: 301 SLSNLQQNQQSSIQQPTQSMLQQPQQPVLRQQPQSQQHAVMHPQSTMSQQTSLPSQQQQQ 360
Query: 361 LIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPSQQQHQLMAP 420
LIS QPNSS+MQQN LIGQQNSVGDMQQ L QQSRSHGQQSNLSNMQ PP QQQ QLMA
Sbjct: 361 LISQQPNSSSMQQNPLIGQQNSVGDMQQHLPQQSRSHGQQSNLSNMQSPPLQQQQQLMAQ 420
Query: 421 QSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQM-QQTPQN 480
Q+NLSNLQQQQLGPQSNVSGLQQQQMHG QSGNSNMQS+QHP+HMLQQNK M QQ PQN
Sbjct: 421 QNNLSNLQQQQLGPQSNVSGLQQQQMHGTQSGNSNMQSDQHPMHMLQQNKVHMQQQPPQN 480
Query: 481 TSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPL--QQQQPPNTMSHELQQRLQAGG 540
SNLLS QG QGQLQSSQQLMSQIPLQSTQVQQQVPL QQQQ PN MSH+LQQRLQ GG
Sbjct: 481 ASNLLSAQGPQGQLQSSQQLMSQIPLQSTQVQQQVPLHQQQQQQPNAMSHDLQQRLQVGG 540
Query: 541 QAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMK 600
QAPSSLLQ+QNVMDQ KQLYH+Q ALPETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMK
Sbjct: 541 QAPSSLLQSQNVMDQQKQLYHSQRALPETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMK 600
Query: 601 DLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQKSSIVMG 660
+LYF ELKEMYQKILPK+ Q +S PQQPKSEQLNKL+ FK ILERL++FLQ+ KS+IV+G
Sbjct: 601 ELYFFELKEMYQKILPKVNQLESLPQQPKSEQLNKLKTFKLILERLIAFLQISKSNIVIG 660
Query: 661 FKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQSSENQINS 720
KDKI YE+QIVSFLNSNRPRN VSTLQPGQLPA+HMQSIQQSQ QMT LQS ENQIN
Sbjct: 661 LKDKIGHYEKQIVSFLNSNRPRNPVSTLQPGQLPASHMQSIQQSQSQMTPLQSPENQINP 720
Query: 721 QLHSASMQGSVAPVQQNNMNNMQHNSLSTFSGSAPQQNMMIPIQPGSNLESGQGNSLSSL 780
QLHSA+MQGSVAPVQQNNMNNMQHNSL TFSGSA QQNM IP+QPGS+LESGQGNSLSS
Sbjct: 721 QLHSANMQGSVAPVQQNNMNNMQHNSLPTFSGSAAQQNMTIPMQPGSSLESGQGNSLSSF 780
Query: 781 QQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPNMLQHQHLKQQDPQQL 840
QQVA+GSLQQNSANSSQRANN+SLPSQNGVN LQ NI SLQ+N NMLQHQHLK QDPQ
Sbjct: 781 QQVASGSLQQNSANSSQRANNNSLPSQNGVNTLQPNIGSLQTNHNMLQHQHLK-QDPQ-- 840
Query: 841 MQSQQLKQQLHQRHLQQMKQQIM---QQQQQQQQPQLHQQQPQLHQQGKQQLSTQMQAHQ 900
QQLKQQ+ QR +QQ+KQQ M QQQQQQQQPQLHQQQ QLHQQGK QL QMQAHQ
Sbjct: 841 ---QQLKQQMQQRQMQQLKQQQMLQHQQQQQQQQPQLHQQQSQLHQQGKPQLPAQMQAHQ 900
Query: 901 MSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTH-QQMKPGTSFPISPPIFQAASP 960
+SHLNQ+E MRQGL K GMFQ LPA R YTH QQMKPGTS PISP IFQ ASP
Sbjct: 901 LSHLNQIE-----MRQGLATKSGMFQHLPAAHRSGYTHQQQMKPGTSLPISPQIFQTASP 960
Query: 961 QVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPFVP-SPSTPLAPSPMPGDSEKPT--VSS 1020
QV QNSSPQVDQQ+LLSSI K PLQSASSP V SPSTP+APSPMPGDSEKPT VS+
Sbjct: 961 QVAQNSSPQVDQQNLLSSITKV-PPLQSASSPLVVLSPSTPVAPSPMPGDSEKPTSGVST 1020
Query: 1021 LPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTVSGKSSVTEQ 1080
L NAGNTGQQT+VSGTQ SLAIGTPGISASPLLAEFSGTDG YA+ALPTVSGKSS TEQ
Sbjct: 1021 LTNAGNTGQQTSVSGTQVQSLAIGTPGISASPLLAEFSGTDGAYASALPTVSGKSSATEQ 1080
Query: 1081 PLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQ 1140
PLERLIK VKSM+PKALSASV+GIGSVVSMIDR+AGSAPGNGSRAAVGEDLVAMTKCRLQ
Sbjct: 1081 PLERLIKAVKSMSPKALSASVNGIGSVVSMIDRVAGSAPGNGSRAAVGEDLVAMTKCRLQ 1140
Query: 1141 ARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPSDLESTATSSVKRP 1200
ARNFVSHDG NGTKKMRRYTSAMPLNV SSAGS+NDVFK +E SDLESTATS KR
Sbjct: 1141 ARNFVSHDGSNGTKKMRRYTSAMPLNVVSSAGSINDVFKPFTGAETSDLESTATSRAKRS 1200
Query: 1201 RVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVKCSFSAVALSPS 1260
RVEA+HVLLEEIREINQRLIDTVVVISDEVVDPSAL AAA GSEGTIVKCSFSAVALSPS
Sbjct: 1201 RVEANHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAADGSEGTIVKCSFSAVALSPS 1260
Query: 1261 LKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAKSRFSISLRN 1320
LKSQY SAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEV KEYEDLSIKAKSRFSISLRN
Sbjct: 1261 LKSQYMSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVRKEYEDLSIKAKSRFSISLRN 1320
Query: 1321 LSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSTA 1346
LSQPMSLGDIARTWDVCAR VVSEYAQQSGGGSFCS+YGAWENCLS A
Sbjct: 1321 LSQPMSLGDIARTWDVCARTVVSEYAQQSGGGSFCSRYGAWENCLSAA 1353
BLAST of Sed0011014 vs. ExPASy Swiss-Prot
Match:
F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1)
HSP 1 Score: 1056.6 bits (2731), Expect = 2.4e-307
Identity = 753/1400 (53.79%), Postives = 940/1400 (67.14%), Query Frame = 0
Query: 1 MDTNNWRPT-QGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKI 60
MD NNWRP+ GEP +++GDWR+QL PDSRQ+IVNKIMETLK+HLP SG EG++EL++I
Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60
Query: 61 AVRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQS 120
A RFEEKI++ A +Q+DYLRKIS+KMLTMETKSQ N+ S++ +P + S
Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQ-----NAAGSSAAIPA----ANNGTS 120
Query: 121 MQPQVLNQGQPMPVPMSSNQPQSRQQLLSS----------QSSSSLSSAVSPVSGLASAS 180
+ NQGQ +P +S+NQ Q+ Q LLS S++L S++ PVS + + +
Sbjct: 121 IDSIPTNQGQLLPGSLSTNQSQAPQPLLSQTMQNNTASGMTGSTALPSSMPPVSSITNNN 180
Query: 181 MPNIVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVSQQQQQQSQTQQ 240
++V QN MQNV+G+ Q+S G G+ SN+FS QR + GR QQQ QQ
Sbjct: 181 TTSVVNQNANMQNVAGMLQDSSGQ---HGLSSNMFSGPQRQMLGRPHAMSSQQQ----QQ 240
Query: 241 QQLFLQQQQQLQQQIMKQKFQSGSI--PHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTS 300
L+ QQQLQQQ++KQ FQSG++ P+ L+ SH+ QQQQN++ PNQL SSQQP + TS
Sbjct: 241 PYLY---QQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSSQQPGVPTS 300
Query: 301 SVMQPS------LSNLQQNQQS----PIQQPTQSMLQQPSQPVLRQHQQSHQHPVLH-QQ 360
+ QPS L L NQQS QQ TQSML+Q +LRQH QS Q +H QQ
Sbjct: 301 AT-QPSTVNSAPLQGLHTNQQSSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQASGIHQQQ 360
Query: 361 PSMPQQTSLPTQQQ-QQLISQ--PNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSN 420
S+PQQ+ P QQQ QL+ Q NSS +QQ Q++G Q+ VGDMQQQ Q R QQ+N
Sbjct: 361 SSLPQQSISPLQQQPTQLMRQQAANSSGIQQKQMMG-QHVVGDMQQQ--HQQRLLNQQNN 420
Query: 421 LSNMQFPPSQQ----------------QHQLMAPQSNLSNLQQQQLGPQSNVSGLQ--QQ 480
+ N+Q SQQ Q QLM+ Q++L Q LG QSNV+GLQ QQ
Sbjct: 421 VMNIQQQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGTQSNVAGLQQPQQ 480
Query: 481 QMHGIQSGNSNMQSNQHPVHMLQQNKAQMQQTPQNTSNLLSTQGQQGQLQSSQQLMSQIP 540
QM Q GNS++Q+NQH VHML Q +Q+T Q L S+QGQQ Q Q SQQ Q+
Sbjct: 481 QMLNSQVGNSSLQNNQHSVHMLSQPTVGLQRTHQAGHGLYSSQGQQSQNQPSQQ---QMM 540
Query: 541 LQSTQVQQQVPLQQQQPPNTMSHELQQRLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALP 600
Q QQ+ LQQQ PN + ++QQRLQA GQ SLL QNV+DQ +QLY +Q LP
Sbjct: 541 PQLQSHHQQLGLQQQ--PNLLQQDVQQRLQASGQVTGSLLPPQNVVDQQRQLYQSQRTLP 600
Query: 601 ETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQ 660
E S+SLDSTAQT ANGGDWQEE+YQKIK+MK+ Y +L E+YQ++ KLQQ DS PQQ
Sbjct: 601 EMPSSSLDSTAQTESANGGDWQEEVYQKIKSMKETYLPDLNEIYQRVAAKLQQ-DSMPQQ 660
Query: 661 PKSEQLNKLRAFKGILERLLSFLQVQKSSIVMGFKDKISQYERQIVSFLNSNRPRNSVST 720
+S+QL KLR FK +LER++ FL V KS+I+ KDK++ YE+QI+ FLN +RPR V
Sbjct: 661 QRSDQLEKLRQFKTMLERMIQFLSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPRKPV-- 720
Query: 721 LQPGQLPAAHMQSIQQSQPQMTTLQSSENQINSQLHSASMQGSVAPVQQNNMNNMQHNSL 780
Q GQLP + MQ +QQ Q Q QS +NQ N Q+ S SMQG+ QQ++M NMQ N L
Sbjct: 721 -QQGQLPQSQMQPMQQPQSQTVQDQSHDNQTNPQMQSMSMQGAGPRAQQSSMTNMQSNVL 780
Query: 781 STFSG-SAPQQNMMIPIQPGSNLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPS 840
S+ G SAPQQN+ I P S+LESGQGN+L++ QQVA GS+QQ N+SQ NNSS +
Sbjct: 781 SSRPGVSAPQQNIPSSI-PASSLESGQGNTLNNGQQVAMGSMQQ---NTSQLVNNSSASA 840
Query: 841 QNGVNALQQNISSLQSNPNMLQHQHLKQQDPQQLMQSQQLKQQLHQRHLQQMKQQIMQQQ 900
Q+G++ LQ N++ Q + ++LQHQHLKQQ QQ+ Q+KQQ Q+Q
Sbjct: 841 QSGLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQM----------------QLKQQFQQRQ 900
Query: 901 QQQQQPQLHQQQPQLHQQGKQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLP 960
QQQQ Q QQQ Q QQL + QA Q+ +N M ND+ RQG+ GMFQQ
Sbjct: 901 MQQQQLQARQQQQQ------QQLQARQQAAQLQQMNDM--NDLTSRQGMNVSRGMFQQHS 960
Query: 961 AT-QRPTYTHQQMKPGTSFPISPPIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSA 1020
QR Y QQ+KPG SP + Q ASPQ++Q+ SPQVDQ+ +++ K GTPLQ A
Sbjct: 961 MQGQRANYPLQQLKPGA--VSSPQLLQGASPQMSQHLSPQVDQK---NTVNKMGTPLQPA 1020
Query: 1021 SSPF-VPSP-STPLAPSPMPGDSEKPTVSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISA 1080
+SPF VPSP STPLAPSPM DSEKP SSL QQ SLAIGTPGISA
Sbjct: 1021 NSPFVVPSPSSTPLAPSPMQVDSEKPGSSSLSMGNIARQQATGMQGVVQSLAIGTPGISA 1080
Query: 1081 SPLLAEFSGTDGVYANALPTVSGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSM 1140
SPLL EF+ DG N+ SGK S TE P+ERLI+ VKS++P+ALS++VS IGSVVSM
Sbjct: 1081 SPLLQEFTSPDGNILNSSTITSGKPSATELPIERLIRAVKSISPQALSSAVSDIGSVVSM 1140
Query: 1141 IDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASS 1200
+DRIAGSAPGNGSRA+VGEDLVAMTKCRLQARNF++ +G TKKM+R+T+AMPL+VAS
Sbjct: 1141 VDRIAGSAPGNGSRASVGEDLVAMTKCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASL 1200
Query: 1201 AGSVNDVFK----SEPSDLESTATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISD-- 1260
GSV D +K SE SDLESTATS K+ R E H LLEEI+EINQRLIDTVV ISD
Sbjct: 1201 GGSVGDNYKQFAGSETSDLESTATSDGKKARTETEHALLEEIKEINQRLIDTVVEISDDE 1260
Query: 1261 EVVDPSALVAAAVGSEGTIVKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCS 1320
+ DPS + +++G EGT V+ SF AV+LSP+LK+ +S QMSPIQPLRLLVP +YPN S
Sbjct: 1261 DAADPSEVAISSIGCEGTTVRFSFIAVSLSPALKAHLSSTQMSPIQPLRLLVPCSYPNGS 1320
Query: 1321 PILLDKFPVEVSKEYEDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQ 1346
P LLDK PVE SKE EDLS KA +RF+I LR+LSQPMSL DIA+TWD CARAV+ EYAQQ
Sbjct: 1321 PSLLDKLPVETSKENEDLSSKAMARFNILLRSLSQPMSLKDIAKTWDACARAVICEYAQQ 1335
BLAST of Sed0011014 vs. ExPASy Swiss-Prot
Match:
Q9SHV7 (Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis thaliana OX=3702 GN=MED15C PE=3 SV=1)
HSP 1 Score: 284.3 bits (726), Expect = 7.4e-75
Identity = 316/962 (32.85%), Postives = 462/962 (48.02%), Query Frame = 0
Query: 403 QQQHQLMAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKA 462
Q+Q QL+ +NL P S + QQ G +S+ Q+N +H + Q K
Sbjct: 159 QEQEQLINQLTNL---------PTSRPNNRDQQ---GAFQVSSSQQNNNVTLHAMSQQKN 218
Query: 463 QMQQTPQNTSNLLSTQGQQ-GQLQSSQQLMSQIPLQSTQVQQQVPLQQQ-QPPNTMSH-E 522
+Q T+GQQ GQ Q P+ S Q +QQ P+QQ Q N H +
Sbjct: 219 NLQS---------MTRGQQVGQSQ---------PMMSQQYRQQYPMQQDPQNRNLQKHLD 278
Query: 523 LQQRLQAGGQAPSSLLQAQNVMD---QPKQLYHAQSA--LPETSSTSLDSTAQTGQANGG 582
Q QA SSL Q QN+ D QP+QL A + + S DST +T N G
Sbjct: 279 FVQNNTNQFQAASSLRQTQNITDQQNQPQQLERANPSILIMNIIVASQDSTGKTVNVNAG 338
Query: 583 DWQEEIYQKIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQ-LNKLRAFKGILER 642
+WQEE YQKIK +K++ L M+Q++ KL++ +S P QP Q + KL+A K +E
Sbjct: 339 NWQEETYQKIKKLKEMCLPVLSLMHQRVAEKLRETESLPPQPMQAQWIEKLKAGKLSMEH 398
Query: 643 LLSFLQVQKSSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQ 702
L+ FL V +SS+ +DK SQYE I+ F S + Q GQ P SQ
Sbjct: 399 LMFFLNVHRSSVSEKHRDKFSQYEYHILKFTKSQTMVLRPTQQQQGQFP--------PSQ 458
Query: 703 PQMTTLQSSENQINSQLHSASMQGSVAPVQQNNMNNMQHNSLSTFSGSAPQQNMMIPIQP 762
M T QS + ++ L+ + + P QN + + ++ I+P
Sbjct: 459 TAMQT-QSPQVHVSQSLYKEQRRSRLMPSSQN------------------EASSLLQIRP 518
Query: 763 GSNLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPN 822
L+ N + ++G++ S + RA N+ NISS+QS
Sbjct: 519 --KLDPRDENII----MASSGNVMLPSVKQNPRAVNT-------------NISSVQS--- 578
Query: 823 MLQHQHLKQQDPQQLMQSQQLKQQLHQRHLQQMKQQIMQQQQQQQQPQLHQQQPQLHQQG 882
+Q+Q++ Q+ QQQP QQG
Sbjct: 579 -------------------------------------LQKQKRFHHRQMQQQQP---QQG 638
Query: 883 KQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTSFP 942
Q HQM E+ND++MR+ + K + +Q ++ + Q+
Sbjct: 639 NHQ-------HQM---QTNEMNDVRMRERVNIKARLLEQQVSSSQRQVPKQES------- 698
Query: 943 ISPPIFQAASPQVTQNSSPQ-VDQQSLLSSIAKTGTPLQSASSPFVPSPSTPLAPSPMPG 1002
+S Q+ +SSPQ VDQ L ++I KTGTPL S+ S FV APSP+PG
Sbjct: 699 ------NVSSSQIQNHSSPQLVDQHILPATINKTGTPLNSSGSAFVAP-----APSPVPG 758
Query: 1003 DSEKPTVSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTV 1062
DSE P P +G ++ T S +GT +PLL V
Sbjct: 759 DSEMPISVESPVSG----VDEINSTLDSSSKLGT---QETPLL---------------FV 818
Query: 1063 SGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGN-GSRAAVGED 1122
+TE+P++RLIK ++ +PK+L+ SVS I SV+SM+D I GS P + GSRA +GED
Sbjct: 819 PPPEPITERPIDRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGED 878
Query: 1123 LVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFKSEPSDLESTAT 1182
L T RNF +H+ N +K+M+R + +P +++S S + E S++ ST +
Sbjct: 879 LSERT------RNFTTHEETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLE-SEVVSTTS 932
Query: 1183 SSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVKCSFSA 1242
S +K + + LL+EI+E N RL++TVV I DE S GTIV C+++
Sbjct: 939 SGLKVNNIAPGYALLQEIKETNGRLVETVVEICDE------------DSLGTIVTCTYAP 932
Query: 1243 VALSPSLKSQYTSAQM----------SPIQPLRLLVPTNYPNCSPILLDKFPVEVS-KEY 1302
VALS + K Y S ++ + IQPLRLL P +YP SPI+L++ + S +Y
Sbjct: 999 VALSATFKDHYKSGKIIFYVSKCLMQAQIQPLRLLFPMDYPYSSPIVLEEISFDTSVHKY 932
Query: 1303 EDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWEN 1343
EDLS + +SRFS+S++ S+P IA+TW+ CARA + EYA++ GGG+F SKYGAWE
Sbjct: 1059 EDLSARTRSRFSLSMKEFSEPGFSKGIAQTWNDCARATMVEYAERHGGGTFSSKYGAWET 932
BLAST of Sed0011014 vs. ExPASy Swiss-Prot
Match:
Q54UW4 (Bromodomain-containing protein DDB_G0280777 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280777 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 1.6e-05
Identity = 129/391 (32.99%), Postives = 161/391 (41.18%), Query Frame = 0
Query: 172 NIVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVSQQQ---------- 231
N N N + N+ N+ P + +++Q G Q QQQ
Sbjct: 1352 NYNNNNNNNNNNNNNNNNNNNNNNNNNYPKPIQASTQTGNLGIQQQLQQQQLHQLQQQQQ 1411
Query: 232 -QQQSQTQQQQLFLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQ 291
QQQ Q QQQQL LQQQQQ QQQ+ Q+ Q + Q Q + QQ + P Q
Sbjct: 1412 LQQQYQIQQQQLHLQQQQQQQQQLKLQQIQFQQMQQQQQQQQLQQQTRQPSQPQTPQMQS 1471
Query: 292 QPVLQTSSVMQPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMP 351
QP QT ++ LQQ QQ +QQ Q QQ Q L Q QQ Q QQ
Sbjct: 1472 QP--QTPQILSQPQQQLQQLQQQQLQQQQQLQQQQLQQQQLFQQQQQQQ-----QQQQQQ 1531
Query: 352 QQTSLPTQQQQQLISQPNSSNMQQN-----QLIGQQNSVGDMQQQLTQQSRSHGQQSNLS 411
QQ QQQQQ + P +QQN Q I QQ + QQQ QQ + QQ
Sbjct: 1532 QQQQQQQQQQQQQLLHPQQMQIQQNLQQPLQQIQQQQQIQQQQQQQLQQQQQQQQQQQQQ 1591
Query: 412 NMQFPPSQQQHQLMAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVH 471
Q QQQ Q Q + LQQ Q Q + LQ QQ+ +Q Q Q
Sbjct: 1592 QQQ--QQQQQQQQQQQQQHHQQLQQLQPQQQQQLQQLQPQQLQQLQQLQQLQQLQQ---- 1651
Query: 472 MLQQNKAQMQQTPQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPLQQQQPPNT 531
LQQ + Q Q Q L Q QQ Q QQL Q Q Q QQQ QQQP
Sbjct: 1652 -LQQLQPQQLQQLQQLQQLQPQQLQQPQQLQPQQLQQQQLQQQQQPQQQQQQPQQQPQQQ 1711
Query: 532 MSHELQQRLQAGGQAPSSLLQAQNVMDQPKQ 547
+ Q + Q Q+ +S + ++ K+
Sbjct: 1712 PQQQQQPQYQTTFQSIASPKEKDKEREKEKE 1728
BLAST of Sed0011014 vs. ExPASy TrEMBL
Match:
A0A6J1DNN0 (mediator of RNA polymerase II transcription subunit 15a OS=Momordica charantia OX=3673 GN=LOC111021687 PE=4 SV=1)
HSP 1 Score: 1969.9 bits (5102), Expect = 0.0e+00
Identity = 1168/1377 (84.82%), Postives = 1236/1377 (89.76%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MDT+NWRP QGGEP ++SGDWRSQLQ DSRQRIVNKIMETLKRHLPVSG+EGLSEL+KIA
Sbjct: 1 MDTSNWRPPQGGEPPLDSGDWRSQLQNDSRQRIVNKIMETLKRHLPVSGNEGLSELRKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIY AATSQSDYLRKISLKMLTMETKSQ+ MGN LPSNS+VP NKPLD+ SQSM
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQS-SMGNPLPSNSMVPSNKPLDTASQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLSS--------QSSSSLSSAVSPVSGLASASMPN 180
Q +NQ VP+SSNQPQSRQQLLS QSSSSL SAV PV+GLA +SMP
Sbjct: 121 PSQAINQS---TVPLSSNQPQSRQQLLSQNIQNTIAPQSSSSLPSAVPPVTGLAPSSMPT 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVSQQQQQQSQTQQQQL 240
+VGQ+ +MQ+VSGV+QN VGN++GQGVPSNVF NSQRPIQGRQVVSQQQQQQSQ+QQQ L
Sbjct: 181 MVGQSSSMQSVSGVSQN-VGNTVGQGVPSNVFPNSQRPIQGRQVVSQQQQQQSQSQQQYL 240
Query: 241 FLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTS----- 300
+ Q QLQQQ++KQK+Q GS+ HQLMQ HMSQQQQNL+ PNQLQSSQQ VLQTS
Sbjct: 241 Y---QHQLQQQLIKQKYQQGSMSHQLMQPHMSQQQQNLIQPNQLQSSQQSVLQTSSVMQP 300
Query: 301 SVMQPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPT 360
SVMQPSLSNLQQ+QQSPIQQPTQSMLQQPSQPVLRQ QQS H +HQQP+MPQQT LP+
Sbjct: 301 SVMQPSLSNLQQSQQSPIQQPTQSMLQQPSQPVLRQQQQSQPHAAMHQQPTMPQQTMLPS 360
Query: 361 QQQQQLIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPSQQQH 420
QQQQQLIS QPNSSNMQQN LIGQQ+S+GDMQQQL QQSRSHGQQSNLSNMQ PPSQQQ
Sbjct: 361 QQQQQLISQQPNSSNMQQNSLIGQQSSLGDMQQQLPQQSRSHGQQSNLSNMQSPPSQQQQ 420
Query: 421 QLMAPQSNLSNL---QQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQ 480
QLM Q+NLSNL QQQQLGPQSNVSGL QQQ+HG QSGNSNMQ+NQH VHML QNK Q
Sbjct: 421 QLMTQQNNLSNLQQQQQQQLGPQSNVSGL-QQQIHGTQSGNSNMQTNQHSVHMLHQNKVQ 480
Query: 481 M-QQTPQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPL-QQQQPPNTMSHELQ 540
M QQ P NTSNLLSTQGQQGQLQ SQQLMSQIPLQSTQVQQQVPL QQQQPPN MSHELQ
Sbjct: 481 MQQQPPPNTSNLLSTQGQQGQLQPSQQLMSQIPLQSTQVQQQVPLQQQQQPPNVMSHELQ 540
Query: 541 QRLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIY 600
QRLQ GQAP SLLQ QNVMDQ KQ+YH+Q ALPETSSTSLDSTAQTGQAN GDWQEEIY
Sbjct: 541 QRLQVSGQAPGSLLQPQNVMDQQKQVYHSQRALPETSSTSLDSTAQTGQANAGDWQEEIY 600
Query: 601 QKIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQ 660
QKIKAMK+LYF ELKEMYQKILPKL QFDS PQQPK EQLNKL+AFK ILERLL+FLQV
Sbjct: 601 QKIKAMKELYFFELKEMYQKILPKLNQFDSLPQQPKLEQLNKLKAFKSILERLLAFLQVP 660
Query: 661 KSSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQS 720
KS+IV+GFKDKI YE+QIVSFLNSNRPRN VSTLQPGQLPA+HM SIQQSQ QMT+LQS
Sbjct: 661 KSNIVLGFKDKIGHYEKQIVSFLNSNRPRNPVSTLQPGQLPASHMHSIQQSQSQMTSLQS 720
Query: 721 SENQINSQLHSASMQGSVAPVQQNNMNNMQHNSLSTFSGSAPQQNMMIPIQPGSNLESGQ 780
ENQINSQLHSA+MQ SVAPVQQNNMNNMQHNSLS+FSGSA QQNM P+QPGS LESGQ
Sbjct: 721 PENQINSQLHSANMQCSVAPVQQNNMNNMQHNSLSSFSGSAAQQNMTSPMQPGSGLESGQ 780
Query: 781 GNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPNMLQHQHLK 840
GNSLSSLQQVAAGSLQQN AN+SQRAN+SSL SQNGVN LQQNIS+LQSNPNMLQHQHLK
Sbjct: 781 GNSLSSLQQVAAGSLQQNPANTSQRANSSSLSSQNGVNPLQQNISALQSNPNMLQHQHLK 840
Query: 841 QQDPQQLMQS-QQLKQQLHQRHLQQMKQQIMQQ-QQQQQQPQLHQQQPQLHQQGKQQLST 900
QQDPQQLMQS QQLKQQL QRH+ Q+KQQ++QQ QQQQQQPQ HQQQ QLHQQGKQQL T
Sbjct: 841 QQDPQQLMQSPQQLKQQLQQRHIHQLKQQMLQQHQQQQQQPQSHQQQSQLHQQGKQQLPT 900
Query: 901 --QMQAHQMSHLNQM-EINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTSFPISP 960
QMQAHQMSHLN + EIND+KMRQGL KPGMFQ LPATQR Y+H Q+KPGTSFPISP
Sbjct: 901 QMQMQAHQMSHLNPINEINDLKMRQGLAVKPGMFQHLPATQRSAYSHPQLKPGTSFPISP 960
Query: 961 PIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPF-VPSPST-PLAPSPMPGDS 1020
PIFQAASPQV QNSSPQVDQQSLLSSI KTGTPLQSASSPF VPSPST P+APSP+PGDS
Sbjct: 961 PIFQAASPQVAQNSSPQVDQQSLLSSITKTGTPLQSASSPFVVPSPSTSPVAPSPIPGDS 1020
Query: 1021 EKP--TVSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTV 1080
EKP VSSL NAGNTGQQT+VSGTQA SLAIGTPGISASPLLAEFSGTDG Y NALPTV
Sbjct: 1021 EKPMSAVSSLTNAGNTGQQTSVSGTQAQSLAIGTPGISASPLLAEFSGTDGSYVNALPTV 1080
Query: 1081 SGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL 1140
SGKS+VTEQPLERLIK VKSM+PKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL
Sbjct: 1081 SGKSNVTEQPLERLIKAVKSMSPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL 1140
Query: 1141 VAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPSDLES 1200
VAMTKCRLQARNFVSHDG NGTKKMRRYTSAMPLNV SSAGSVNDVFK +E SDLES
Sbjct: 1141 VAMTKCRLQARNFVSHDGLNGTKKMRRYTSAMPLNVVSSAGSVNDVFKPLTGAETSDLES 1200
Query: 1201 TATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVKCS 1260
TATSSVKRPRVEA+HVLLEEIREINQRLIDTVVVISDEVVDPSALVAAA GSEGTIVKCS
Sbjct: 1201 TATSSVKRPRVEANHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAADGSEGTIVKCS 1260
Query: 1261 FSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK 1320
FSAVALSP+LKSQY SAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK
Sbjct: 1261 FSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK 1320
Query: 1321 SRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSTA 1346
SRFSISLRNLSQPMSLG+IARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS A
Sbjct: 1321 SRFSISLRNLSQPMSLGEIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSAA 1368
BLAST of Sed0011014 vs. ExPASy TrEMBL
Match:
A0A6J1JM75 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485927 PE=4 SV=1)
HSP 1 Score: 1964.9 bits (5089), Expect = 0.0e+00
Identity = 1164/1381 (84.29%), Postives = 1225/1381 (88.70%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MD+NNWRP QGGE GV++GDWRSQLQPDSR RIVNKIMETLKRHLPVSGHEGLSEL+KIA
Sbjct: 1 MDSNNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQ +LPSNS+VP NKPLDSTSQSM
Sbjct: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQT----TALPSNSMVPTNKPLDSTSQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLS--------SQSSSSLSSAVSPVSGLASASMPN 180
Q QVLNQG M PMSSNQPQ RQQLLS SQSSSSL S+V PV+GLASA M N
Sbjct: 121 QSQVLNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMAN 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVS--QQQQQQSQTQQQ 240
IVGQNP+MQNVSGV Q+SVGN+MGQGV +NVF+NSQRPIQGRQVVS QQQQQQSQ+QQQ
Sbjct: 181 IVGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQ 240
Query: 241 QLFLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTSSVM 300
QLF QQQ LQQQIMKQKFQ GS+PHQLMQSH+ QQQ NLMPPNQLQSSQQ SVM
Sbjct: 241 QLFF-QQQHLQQQIMKQKFQQGSMPHQLMQSHIPQQQTNLMPPNQLQSSQQ------SVM 300
Query: 301 QPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPTQQQ 360
QPSLSNLQQNQQS IQQPTQSMLQQP QPVLRQ QQS QH VLHQQP+M QQ SL +QQQ
Sbjct: 301 QPSLSNLQQNQQSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQ 360
Query: 361 QQLIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPS------Q 420
QQLI+ Q NSSNMQQN LI QNSVGDMQQQL QQSRSHGQQSNLSNMQ PPS Q
Sbjct: 361 QQLINQQSNSSNMQQNSLI--QNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQ 420
Query: 421 QQHQLMAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQ 480
QQ QLM QS+LSNLQQ QLGPQSNVSGLQQQQMHG QSGNSNMQSNQH VHM+QQNK Q
Sbjct: 421 QQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQ 480
Query: 481 M-QQTPQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPLQQQQPPNTMSHELQQ 540
M QQ PQN SNLLSTQGQQGQLQSSQQLMSQIPLQS QVQQQV LQQQ NT+SHELQQ
Sbjct: 481 MQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQPQSNTLSHELQQ 540
Query: 541 RLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIYQ 600
RLQAGGQAP LLQ+QNVMDQ KQLYH Q LPETSSTSLDSTAQTGQANGGDWQEEIYQ
Sbjct: 541 RLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQ 600
Query: 601 KIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQK 660
KIK+MK+LY ELKEMYQKILPK+ QFDS PQQPKSEQLNKLRAF+ ILERL++FLQV K
Sbjct: 601 KIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPK 660
Query: 661 SSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQSS 720
++IV+GFKDKI YE+QIVSFLNSNRPRN VSTLQ GQLPA+HMQS+QQSQ QMT LQS
Sbjct: 661 NNIVIGFKDKIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSP 720
Query: 721 ENQINSQLHSASMQGSVAPVQQ---------NNMNNMQHNSLSTFSGSAPQQNMMIPIQP 780
ENQIN QLHSA+MQGSVAPVQQ NNMNNMQHNSL TFSGSAPQQNM IP+QP
Sbjct: 721 ENQINPQLHSANMQGSVAPVQQNNMNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQP 780
Query: 781 GSNLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPN 840
GS+LESGQGNSLSSLQQV A SLQQN ANSSQR NNSSL SQNGVN LQ NISSLQSN N
Sbjct: 781 GSSLESGQGNSLSSLQQVGAVSLQQNPANSSQRVNNSSLASQNGVNVLQPNISSLQSNTN 840
Query: 841 MLQHQHLKQQDPQQLMQS-QQLKQQLHQRHLQQMKQQIMQ-QQQQQQQPQLHQQQPQLHQ 900
+LQHQH+KQQDPQQL+QS QQLKQQ+ QRH+Q +KQQ++Q QQQQQQQPQLHQQQ QL Q
Sbjct: 841 ILQHQHMKQQDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQ 900
Query: 901 QGKQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTS 960
QGKQQL TQMQAHQMSHLNQ+EIND+KMRQG+ AKPGMFQ P TQR YTH QMKPGTS
Sbjct: 901 QGKQQLPTQMQAHQMSHLNQIEINDLKMRQGVAAKPGMFQH-PGTQRSAYTHPQMKPGTS 960
Query: 961 FPISPPIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPF-VPSPSTPLAPSPM 1020
FPISPPIFQA SPQVTQNSSPQVDQQ++ SS+ + GTPLQSASSPF VPSPSTPLAPSPM
Sbjct: 961 FPISPPIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPM 1020
Query: 1021 PGDSEKPT--VSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANA 1080
PGDSEKPT VSSLPNAGNTGQQ NVSG QAPSLAIGTPGISASPLLAEFSGTDG YA A
Sbjct: 1021 PGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIA 1080
Query: 1081 LPTVSGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAV 1140
LPTVSGKSS TEQPLERLIK VKSM+PKAL+ASVSGIGSVVSMIDRIAGSAPGNGSRAAV
Sbjct: 1081 LPTVSGKSSDTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAV 1140
Query: 1141 GEDLVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPS 1200
GEDLVAMTKCRLQARNFVSHDG NGTK+MRR+TSAMPLNV SSAGSVNDVFK +E S
Sbjct: 1141 GEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETS 1200
Query: 1201 DLESTATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTI 1260
DLESTATSSVKRPR+EASHVLLEEIREINQRLIDTVVVISDEVVDPSAL AAA GS+GTI
Sbjct: 1201 DLESTATSSVKRPRIEASHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAADGSDGTI 1260
Query: 1261 VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLS 1320
VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFP+EVSKEYEDLS
Sbjct: 1261 VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPIEVSKEYEDLS 1320
Query: 1321 IKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLST 1346
IKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS
Sbjct: 1321 IKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSA 1367
BLAST of Sed0011014 vs. ExPASy TrEMBL
Match:
A0A6J1JMY4 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485927 PE=4 SV=1)
HSP 1 Score: 1960.3 bits (5077), Expect = 0.0e+00
Identity = 1164/1382 (84.23%), Postives = 1225/1382 (88.64%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MD+NNWRP QGGE GV++GDWRSQLQPDSR RIVNKIMETLKRHLPVSGHEGLSEL+KIA
Sbjct: 1 MDSNNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQ +LPSNS+VP NKPLDSTSQSM
Sbjct: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQT----TALPSNSMVPTNKPLDSTSQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLS--------SQSSSSLSSAVSPVSGLASASMPN 180
Q QVLNQG M PMSSNQPQ RQQLLS SQSSSSL S+V PV+GLASA M N
Sbjct: 121 QSQVLNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMAN 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVS--QQQQQQSQTQQQ 240
IVGQNP+MQNVSGV Q+SVGN+MGQGV +NVF+NSQRPIQGRQVVS QQQQQQSQ+QQQ
Sbjct: 181 IVGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQ 240
Query: 241 QLFLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTSSVM 300
QLF QQQ LQQQIMKQKFQ GS+PHQLMQSH+ QQQ NLMPPNQLQSSQQ SVM
Sbjct: 241 QLFF-QQQHLQQQIMKQKFQQGSMPHQLMQSHIPQQQTNLMPPNQLQSSQQ------SVM 300
Query: 301 QPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPTQQQ 360
QPSLSNLQQNQQS IQQPTQSMLQQP QPVLRQ QQS QH VLHQQP+M QQ SL +QQQ
Sbjct: 301 QPSLSNLQQNQQSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQ 360
Query: 361 QQLIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPS------Q 420
QQLI+ Q NSSNMQQN LI QNSVGDMQQQL QQSRSHGQQSNLSNMQ PPS Q
Sbjct: 361 QQLINQQSNSSNMQQNSLI--QNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQ 420
Query: 421 QQHQLMAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQ 480
QQ QLM QS+LSNLQQ QLGPQSNVSGLQQQQMHG QSGNSNMQSNQH VHM+QQNK Q
Sbjct: 421 QQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQ 480
Query: 481 M-QQTPQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPLQQQQPPNTMSHELQQ 540
M QQ PQN SNLLSTQGQQGQLQSSQQLMSQIPLQS QVQQQV LQQQ NT+SHELQQ
Sbjct: 481 MQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQPQSNTLSHELQQ 540
Query: 541 RLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIYQ 600
RLQAGGQAP LLQ+QNVMDQ KQLYH Q LPETSSTSLDSTAQTGQANGGDWQEEIYQ
Sbjct: 541 RLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQ 600
Query: 601 KIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQK 660
KIK+MK+LY ELKEMYQKILPK+ QFDS PQQPKSEQLNKLRAF+ ILERL++FLQV K
Sbjct: 601 KIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPK 660
Query: 661 SSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQSS 720
++IV+GFKDKI YE+QIVSFLNSNRPRN VSTLQ GQLPA+HMQS+QQSQ QMT LQS
Sbjct: 661 NNIVIGFKDKIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSP 720
Query: 721 ENQINSQLHSASMQGSVAPVQQ---------NNMNNMQHNSLSTFSGSAPQQNMMIPIQP 780
ENQIN QLHSA+MQGSVAPVQQ NNMNNMQHNSL TFSGSAPQQNM IP+QP
Sbjct: 721 ENQINPQLHSANMQGSVAPVQQNNMNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQP 780
Query: 781 GSNLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPN 840
GS+LESGQGNSLSSLQQV A SLQQN ANSSQR NNSSL SQNGVN LQ NISSLQSN N
Sbjct: 781 GSSLESGQGNSLSSLQQVGAVSLQQNPANSSQRVNNSSLASQNGVNVLQPNISSLQSNTN 840
Query: 841 MLQHQHLKQQDPQQLMQS-QQLKQQLHQRHLQQMKQQIMQ-QQQQQQQPQLHQQQPQLHQ 900
+LQHQH+KQQDPQQL+QS QQLKQQ+ QRH+Q +KQQ++Q QQQQQQQPQLHQQQ QL Q
Sbjct: 841 ILQHQHMKQQDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQ 900
Query: 901 QGKQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTS 960
QGKQQL TQMQAHQMSHLNQ+EIND+KMRQG+ AKPGMFQ P TQR YTH QMKPGTS
Sbjct: 901 QGKQQLPTQMQAHQMSHLNQIEINDLKMRQGVAAKPGMFQH-PGTQRSAYTHPQMKPGTS 960
Query: 961 FPISPPIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPF-VPSPSTPLAPSPM 1020
FPISPPIFQA SPQVTQNSSPQVDQQ++ SS+ + GTPLQSASSPF VPSPSTPLAPSPM
Sbjct: 961 FPISPPIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPM 1020
Query: 1021 PGDSEKPT--VSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANA 1080
PGDSEKPT VSSLPNAGNTGQQ NVSG QAPSLAIGTPGISASPLLAEFSGTDG YA A
Sbjct: 1021 PGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIA 1080
Query: 1081 LPTVSGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAV 1140
LPTVSGKSS TEQPLERLIK VKSM+PKAL+ASVSGIGSVVSMIDRIAGSAPGNGSRAAV
Sbjct: 1081 LPTVSGKSSDTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAV 1140
Query: 1141 GEDLVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPS 1200
GEDLVAMTKCRLQARNFVSHDG NGTK+MRR+TSAMPLNV SSAGSVNDVFK +E S
Sbjct: 1141 GEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETS 1200
Query: 1201 DLESTATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTI 1260
DLESTATSSVKRPR+EASHVLLEEIREINQRLIDTVVVISDEVVDPSAL AAA GS+GTI
Sbjct: 1201 DLESTATSSVKRPRIEASHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAADGSDGTI 1260
Query: 1261 VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEV-SKEYEDL 1320
VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFP+EV SKEYEDL
Sbjct: 1261 VKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPIEVSSKEYEDL 1320
Query: 1321 SIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS 1346
SIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS
Sbjct: 1321 SIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS 1368
BLAST of Sed0011014 vs. ExPASy TrEMBL
Match:
A0A6J1HR60 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467027 PE=4 SV=1)
HSP 1 Score: 1954.1 bits (5061), Expect = 0.0e+00
Identity = 1153/1368 (84.28%), Postives = 1212/1368 (88.60%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MDTNNWRPTQGGEPG+E GDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA
Sbjct: 1 MDTNNWRPTQGGEPGIEDGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIY AATSQSDYLRKISLKMLTMETKSQ PMG SLPSN +VP NKPLDS SQSM
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQT-PMGTSLPSNPMVPSNKPLDSASQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLS--------SQSSSSLSSAVSPVSGLASASMPN 180
QPQVLNQGQ + VP SNQPQSRQQLLS SQSSSSL SAV PVSGLAS+SMPN
Sbjct: 121 QPQVLNQGQSISVPQPSNQPQSRQQLLSQNIQNNIVSQSSSSLPSAVPPVSGLASSSMPN 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVSQQQQQQSQTQQQQL 240
+VGQNP+MQNVSG+ QNSVGNSMGQGVPSNVF+NSQRP+QGRQVVSQQQQQQ+QTQQQQ
Sbjct: 181 MVGQNPSMQNVSGIPQNSVGNSMGQGVPSNVFTNSQRPVQGRQVVSQQQQQQAQTQQQQ- 240
Query: 241 FLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTSSVMQP 300
FL QQQLQQQ+M +KFQ GSIP Q MQSH+ QQQQNLM PNQLQSSQQP +Q S+MQ
Sbjct: 241 FLFHQQQLQQQMMNKKFQQGSIPQQRMQSHIPQQQQNLMQPNQLQSSQQPAMQ-PSMMQS 300
Query: 301 SLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPTQQQQQ 360
SLSNLQQNQQS IQQPTQSMLQQP QPVLRQ QS QH V+H Q +M QQTSLP+QQQQQ
Sbjct: 301 SLSNLQQNQQSSIQQPTQSMLQQPQQPVLRQQPQSQQHAVMHPQSTMSQQTSLPSQQQQQ 360
Query: 361 LIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPSQQQHQLMAP 420
LIS QPNSS+MQQN LIGQQNSVGDMQQ L QQSRSHGQQSNLSNMQ PP QQQ QLMA
Sbjct: 361 LISQQPNSSSMQQNPLIGQQNSVGDMQQHLPQQSRSHGQQSNLSNMQSPPLQQQQQLMAQ 420
Query: 421 QSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQM-QQTPQN 480
Q+NLSNLQQQQLGPQSNVSGLQQQQMHG QSGNSNMQS+QHP+HMLQQNK M QQ PQN
Sbjct: 421 QNNLSNLQQQQLGPQSNVSGLQQQQMHGTQSGNSNMQSDQHPMHMLQQNKVHMQQQPPQN 480
Query: 481 TSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPL--QQQQPPNTMSHELQQRLQAGG 540
SNLLS QG QGQLQSSQQLMSQIPLQSTQVQQQVPL QQQQ PN MSH+LQQRLQ GG
Sbjct: 481 ASNLLSAQGPQGQLQSSQQLMSQIPLQSTQVQQQVPLHQQQQQQPNAMSHDLQQRLQVGG 540
Query: 541 QAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMK 600
QAPSSLLQ+QNVMDQ KQLYH+Q ALPETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMK
Sbjct: 541 QAPSSLLQSQNVMDQQKQLYHSQRALPETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMK 600
Query: 601 DLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQKSSIVMG 660
+LYF ELKEMYQKILPK+ Q +S PQQPKSEQLNKL+ FK ILERL++FLQ+ KS+IV+G
Sbjct: 601 ELYFFELKEMYQKILPKVNQLESLPQQPKSEQLNKLKTFKLILERLIAFLQISKSNIVIG 660
Query: 661 FKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQSSENQINS 720
KDKI YE+QIVSFLNSNRPRN VSTLQPGQLPA+HMQSIQQSQ QMT LQS ENQIN
Sbjct: 661 LKDKIGHYEKQIVSFLNSNRPRNPVSTLQPGQLPASHMQSIQQSQSQMTPLQSPENQINP 720
Query: 721 QLHSASMQGSVAPVQQNNMNNMQHNSLSTFSGSAPQQNMMIPIQPGSNLESGQGNSLSSL 780
QLHSA+MQGSVAPVQQNNMNNMQHNSL TFSGSA QQNM IP+QPGS+LESGQGNSLSS
Sbjct: 721 QLHSANMQGSVAPVQQNNMNNMQHNSLPTFSGSAAQQNMTIPMQPGSSLESGQGNSLSSF 780
Query: 781 QQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPNMLQHQHLKQQDPQQL 840
QQVA+GSLQQNSANSSQRANN+SLPSQNGVN LQ NI SLQ+N NMLQHQHLK QDPQ
Sbjct: 781 QQVASGSLQQNSANSSQRANNNSLPSQNGVNTLQPNIGSLQTNHNMLQHQHLK-QDPQ-- 840
Query: 841 MQSQQLKQQLHQRHLQQMKQQIM---QQQQQQQQPQLHQQQPQLHQQGKQQLSTQMQAHQ 900
QQLKQQ+ QR +QQ+KQQ M QQQQQQQQPQLHQQQ QLHQQGK QL QMQAHQ
Sbjct: 841 ---QQLKQQMQQRQMQQLKQQQMLQHQQQQQQQQPQLHQQQSQLHQQGKPQLPAQMQAHQ 900
Query: 901 MSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTH-QQMKPGTSFPISPPIFQAASP 960
+SHLNQ+E MRQGL K GMFQ LPA R YTH QQMKPGTS PISP IFQ ASP
Sbjct: 901 LSHLNQIE-----MRQGLATKSGMFQHLPAAHRSGYTHQQQMKPGTSLPISPQIFQTASP 960
Query: 961 QVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPFVP-SPSTPLAPSPMPGDSEKPT--VSS 1020
QV QNSSPQVDQQ+LLSSI K PLQSASSP V SPSTP+APSPMPGDSEKPT VS+
Sbjct: 961 QVAQNSSPQVDQQNLLSSITKV-PPLQSASSPLVVLSPSTPVAPSPMPGDSEKPTSGVST 1020
Query: 1021 LPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTVSGKSSVTEQ 1080
L NAGNTGQQT+VSGTQ SLAIGTPGISASPLLAEFSGTDG YA+ALPTVSGKSS TEQ
Sbjct: 1021 LTNAGNTGQQTSVSGTQVQSLAIGTPGISASPLLAEFSGTDGAYASALPTVSGKSSATEQ 1080
Query: 1081 PLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQ 1140
PLERLIK VKSM+PKALSASV+GIGSVVSMIDR+AGSAPGNGSRAAVGEDLVAMTKCRLQ
Sbjct: 1081 PLERLIKAVKSMSPKALSASVNGIGSVVSMIDRVAGSAPGNGSRAAVGEDLVAMTKCRLQ 1140
Query: 1141 ARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPSDLESTATSSVKRP 1200
ARNFVSHDG NGTKKMRRYTSAMPLNV SSAGS+NDVFK +E SDLESTATS KR
Sbjct: 1141 ARNFVSHDGSNGTKKMRRYTSAMPLNVVSSAGSINDVFKPFTGAETSDLESTATSRAKRS 1200
Query: 1201 RVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVKCSFSAVALSPS 1260
RVEA+HVLLEEIREINQRLIDTVVVISDEVVDPSAL AAA GSEGTIVKCSFSAVALSPS
Sbjct: 1201 RVEANHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAADGSEGTIVKCSFSAVALSPS 1260
Query: 1261 LKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAKSRFSISLRN 1320
LKSQY SAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEV KEYEDLSIKAKSRFSISLRN
Sbjct: 1261 LKSQYMSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVRKEYEDLSIKAKSRFSISLRN 1320
Query: 1321 LSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSTA 1346
LSQPMSLGDIARTWDVCAR VVSEYAQQSGGGSFCS+YGAWENCLS A
Sbjct: 1321 LSQPMSLGDIARTWDVCARTVVSEYAQQSGGGSFCSRYGAWENCLSAA 1353
BLAST of Sed0011014 vs. ExPASy TrEMBL
Match:
A0A6J1ELX0 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434564 PE=4 SV=1)
HSP 1 Score: 1952.6 bits (5057), Expect = 0.0e+00
Identity = 1161/1377 (84.31%), Postives = 1224/1377 (88.89%), Query Frame = 0
Query: 1 MDTNNWRPTQGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKIA 60
MD++NWRP QGGE GV++GDWRSQLQPDSR RIVNKIMETLKRHLPVSGHEGLSEL+KIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQSM 120
VRFEEKIY AATSQSDYLRKISLKMLTMETKSQ +LPSNS+VP NKPLDSTSQSM
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQT----TALPSNSMVPTNKPLDSTSQSM 120
Query: 121 QPQVLNQGQPMPVPMSSNQPQSRQQLLS--------SQSSSSLSSAVSPVSGLASASMPN 180
Q QVLNQG M PMSSNQPQ RQQLLS SQSSSSL S+V PV+GLASA M N
Sbjct: 121 QSQVLNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMAN 180
Query: 181 IVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVS--QQQQQQSQTQQQ 240
IVGQNP+MQNVSGV Q+SVGN+MGQGV SNVF+NSQRPIQGRQVVS QQQQQQSQ+QQQ
Sbjct: 181 IVGQNPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQ 240
Query: 241 QLFLQQQQQLQQQIMKQKFQSGSIPHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTSSVM 300
QLF QQQ LQQQIMKQK+Q GS+PHQLMQSH+ QQQ NLM PNQL SSQQ SVM
Sbjct: 241 QLFF-QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQ------SVM 300
Query: 301 QPSLSNLQQNQQSPIQQPTQSMLQQPSQPVLRQHQQSHQHPVLHQQPSMPQQTSLPTQQQ 360
QPSLSNLQQNQQS IQQPTQSMLQQP QPVLRQ QQS QH VLHQQP+M QQ SL +QQQ
Sbjct: 301 QPSLSNLQQNQQSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQ 360
Query: 361 QQLIS-QPNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSNLSNMQFPPS-QQQHQL 420
QQLI+ Q NSSNMQQN LI QNSVGDMQQQL QQSRSHGQQSNLSNMQ PPS QQQ QL
Sbjct: 361 QQLINQQSNSSNMQQNSLI--QNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQL 420
Query: 421 MAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKAQM-QQT 480
M QS+LSNLQQ QLGPQSNVSGLQQQQMHG QSGNSNMQSNQH VHM+QQNK QM QQ
Sbjct: 421 MNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQP 480
Query: 481 PQNTSNLLSTQGQQGQLQSSQQLMSQIPLQSTQVQQQVPLQQQQ----PPNTMSHELQQR 540
PQN SNLLSTQGQQGQLQSSQQLMSQIPLQS QVQQQV LQQQQ NT+SHELQQR
Sbjct: 481 PQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQR 540
Query: 541 LQAGGQAPSSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIYQK 600
LQAGGQAP LLQ+QNVMDQ KQLYH Q LPETSSTSLDSTAQTGQANGGDWQEEIYQK
Sbjct: 541 LQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQK 600
Query: 601 IKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQLNKLRAFKGILERLLSFLQVQKS 660
IK+MK+LY ELKEMYQKILPK+ QFDS PQQPKSEQLNKLRAF+ ILERL++FLQV K+
Sbjct: 601 IKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKN 660
Query: 661 SIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQSSE 720
+IV+GFKDKIS YE+QIVSFLNSNRPRN VSTLQ GQLPA+HMQS+QQSQ QMT LQS E
Sbjct: 661 NIVIGFKDKISHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPE 720
Query: 721 NQINSQLHSASMQGSVAPVQQ------NNMNNMQHNSLSTFSGSAPQQNMMIPIQPGSNL 780
NQIN QLHSA+MQGSVA VQQ NNMNNMQHNSL TFSGSAPQQNM IP+QPGS+L
Sbjct: 721 NQINPQLHSANMQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSL 780
Query: 781 ESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPNMLQH 840
ESGQGNSLSSLQQV A SLQQN AN SQRANNSSL SQNGVNALQ NISSLQSN N+LQH
Sbjct: 781 ESGQGNSLSSLQQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQH 840
Query: 841 QHLKQQDPQQLMQS-QQLKQQLHQRHLQQMKQQIMQ-QQQQQQQPQLHQQQPQLHQQGKQ 900
QH+KQQDPQQL+QS QQLKQQ+ QRH+Q +KQQ++Q QQQQQQQPQLHQQQ QL QQGKQ
Sbjct: 841 QHMKQQDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQ 900
Query: 901 QLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTSFPIS 960
QL TQMQAHQMSHLNQ+E+ND+KMRQG+ AKPGMFQ P TQR YTH QMKPGTSFPIS
Sbjct: 901 QLPTQMQAHQMSHLNQIEMNDLKMRQGVAAKPGMFQH-PGTQRSAYTHPQMKPGTSFPIS 960
Query: 961 PPIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSASSPF-VPSPSTPLAPSPMPGDS 1020
PPIFQA SPQVTQNSSPQVDQQ++ SS+ + GTPLQSASSPF VPSPSTPLAPSPMPGDS
Sbjct: 961 PPIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDS 1020
Query: 1021 EKPT--VSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTV 1080
EKPT VSSLPNAGNTGQQ NVSG QAPSLAIGTPGISASPLLAEFSGTDG YA ALPTV
Sbjct: 1021 EKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTV 1080
Query: 1081 SGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL 1140
SGKSSVTEQPLERLIK VKSM+P+AL+ASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL
Sbjct: 1081 SGKSSVTEQPLERLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDL 1140
Query: 1141 VAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFK----SEPSDLES 1200
VAMTKCRLQARNFVSHDG NGTK+MRR+TSAMPLNV SSAGSVNDVFK +E SDLES
Sbjct: 1141 VAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLES 1200
Query: 1201 TATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVKCS 1260
TATSSVKR R+EASHVLLEEIREINQRLIDTVVVISDEVVDPSAL AAA GS+GTIVKCS
Sbjct: 1201 TATSSVKRSRIEASHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAADGSDGTIVKCS 1260
Query: 1261 FSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK 1320
FSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK
Sbjct: 1261 FSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAK 1320
Query: 1321 SRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSTA 1346
SRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLS A
Sbjct: 1321 SRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSAA 1363
BLAST of Sed0011014 vs. TAIR 10
Match:
AT1G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). )
HSP 1 Score: 1056.6 bits (2731), Expect = 1.7e-308
Identity = 753/1400 (53.79%), Postives = 940/1400 (67.14%), Query Frame = 0
Query: 1 MDTNNWRPT-QGGEPGVESGDWRSQLQPDSRQRIVNKIMETLKRHLPVSGHEGLSELKKI 60
MD NNWRP+ GEP +++GDWR+QL PDSRQ+IVNKIMETLK+HLP SG EG++EL++I
Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60
Query: 61 AVRFEEKIYAAATSQSDYLRKISLKMLTMETKSQNPPMGNSLPSNSIVPGNKPLDSTSQS 120
A RFEEKI++ A +Q+DYLRKIS+KMLTMETKSQ N+ S++ +P + S
Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQ-----NAAGSSAAIPA----ANNGTS 120
Query: 121 MQPQVLNQGQPMPVPMSSNQPQSRQQLLSS----------QSSSSLSSAVSPVSGLASAS 180
+ NQGQ +P +S+NQ Q+ Q LLS S++L S++ PVS + + +
Sbjct: 121 IDSIPTNQGQLLPGSLSTNQSQAPQPLLSQTMQNNTASGMTGSTALPSSMPPVSSITNNN 180
Query: 181 MPNIVGQNPTMQNVSGVTQNSVGNSMGQGVPSNVFSNSQRPIQGRQVVSQQQQQQSQTQQ 240
++V QN MQNV+G+ Q+S G G+ SN+FS QR + GR QQQ QQ
Sbjct: 181 TTSVVNQNANMQNVAGMLQDSSGQ---HGLSSNMFSGPQRQMLGRPHAMSSQQQ----QQ 240
Query: 241 QQLFLQQQQQLQQQIMKQKFQSGSI--PHQLMQSHMSQQQQNLMPPNQLQSSQQPVLQTS 300
L+ QQQLQQQ++KQ FQSG++ P+ L+ SH+ QQQQN++ PNQL SSQQP + TS
Sbjct: 241 PYLY---QQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSSQQPGVPTS 300
Query: 301 SVMQPS------LSNLQQNQQS----PIQQPTQSMLQQPSQPVLRQHQQSHQHPVLH-QQ 360
+ QPS L L NQQS QQ TQSML+Q +LRQH QS Q +H QQ
Sbjct: 301 AT-QPSTVNSAPLQGLHTNQQSSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQASGIHQQQ 360
Query: 361 PSMPQQTSLPTQQQ-QQLISQ--PNSSNMQQNQLIGQQNSVGDMQQQLTQQSRSHGQQSN 420
S+PQQ+ P QQQ QL+ Q NSS +QQ Q++G Q+ VGDMQQQ Q R QQ+N
Sbjct: 361 SSLPQQSISPLQQQPTQLMRQQAANSSGIQQKQMMG-QHVVGDMQQQ--HQQRLLNQQNN 420
Query: 421 LSNMQFPPSQQ----------------QHQLMAPQSNLSNLQQQQLGPQSNVSGLQ--QQ 480
+ N+Q SQQ Q QLM+ Q++L Q LG QSNV+GLQ QQ
Sbjct: 421 VMNIQQQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGTQSNVAGLQQPQQ 480
Query: 481 QMHGIQSGNSNMQSNQHPVHMLQQNKAQMQQTPQNTSNLLSTQGQQGQLQSSQQLMSQIP 540
QM Q GNS++Q+NQH VHML Q +Q+T Q L S+QGQQ Q Q SQQ Q+
Sbjct: 481 QMLNSQVGNSSLQNNQHSVHMLSQPTVGLQRTHQAGHGLYSSQGQQSQNQPSQQ---QMM 540
Query: 541 LQSTQVQQQVPLQQQQPPNTMSHELQQRLQAGGQAPSSLLQAQNVMDQPKQLYHAQSALP 600
Q QQ+ LQQQ PN + ++QQRLQA GQ SLL QNV+DQ +QLY +Q LP
Sbjct: 541 PQLQSHHQQLGLQQQ--PNLLQQDVQQRLQASGQVTGSLLPPQNVVDQQRQLYQSQRTLP 600
Query: 601 ETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQ 660
E S+SLDSTAQT ANGGDWQEE+YQKIK+MK+ Y +L E+YQ++ KLQQ DS PQQ
Sbjct: 601 EMPSSSLDSTAQTESANGGDWQEEVYQKIKSMKETYLPDLNEIYQRVAAKLQQ-DSMPQQ 660
Query: 661 PKSEQLNKLRAFKGILERLLSFLQVQKSSIVMGFKDKISQYERQIVSFLNSNRPRNSVST 720
+S+QL KLR FK +LER++ FL V KS+I+ KDK++ YE+QI+ FLN +RPR V
Sbjct: 661 QRSDQLEKLRQFKTMLERMIQFLSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPRKPV-- 720
Query: 721 LQPGQLPAAHMQSIQQSQPQMTTLQSSENQINSQLHSASMQGSVAPVQQNNMNNMQHNSL 780
Q GQLP + MQ +QQ Q Q QS +NQ N Q+ S SMQG+ QQ++M NMQ N L
Sbjct: 721 -QQGQLPQSQMQPMQQPQSQTVQDQSHDNQTNPQMQSMSMQGAGPRAQQSSMTNMQSNVL 780
Query: 781 STFSG-SAPQQNMMIPIQPGSNLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPS 840
S+ G SAPQQN+ I P S+LESGQGN+L++ QQVA GS+QQ N+SQ NNSS +
Sbjct: 781 SSRPGVSAPQQNIPSSI-PASSLESGQGNTLNNGQQVAMGSMQQ---NTSQLVNNSSASA 840
Query: 841 QNGVNALQQNISSLQSNPNMLQHQHLKQQDPQQLMQSQQLKQQLHQRHLQQMKQQIMQQQ 900
Q+G++ LQ N++ Q + ++LQHQHLKQQ QQ+ Q+KQQ Q+Q
Sbjct: 841 QSGLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQM----------------QLKQQFQQRQ 900
Query: 901 QQQQQPQLHQQQPQLHQQGKQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLP 960
QQQQ Q QQQ Q QQL + QA Q+ +N M ND+ RQG+ GMFQQ
Sbjct: 901 MQQQQLQARQQQQQ------QQLQARQQAAQLQQMNDM--NDLTSRQGMNVSRGMFQQHS 960
Query: 961 AT-QRPTYTHQQMKPGTSFPISPPIFQAASPQVTQNSSPQVDQQSLLSSIAKTGTPLQSA 1020
QR Y QQ+KPG SP + Q ASPQ++Q+ SPQVDQ+ +++ K GTPLQ A
Sbjct: 961 MQGQRANYPLQQLKPGA--VSSPQLLQGASPQMSQHLSPQVDQK---NTVNKMGTPLQPA 1020
Query: 1021 SSPF-VPSP-STPLAPSPMPGDSEKPTVSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISA 1080
+SPF VPSP STPLAPSPM DSEKP SSL QQ SLAIGTPGISA
Sbjct: 1021 NSPFVVPSPSSTPLAPSPMQVDSEKPGSSSLSMGNIARQQATGMQGVVQSLAIGTPGISA 1080
Query: 1081 SPLLAEFSGTDGVYANALPTVSGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSM 1140
SPLL EF+ DG N+ SGK S TE P+ERLI+ VKS++P+ALS++VS IGSVVSM
Sbjct: 1081 SPLLQEFTSPDGNILNSSTITSGKPSATELPIERLIRAVKSISPQALSSAVSDIGSVVSM 1140
Query: 1141 IDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASS 1200
+DRIAGSAPGNGSRA+VGEDLVAMTKCRLQARNF++ +G TKKM+R+T+AMPL+VAS
Sbjct: 1141 VDRIAGSAPGNGSRASVGEDLVAMTKCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASL 1200
Query: 1201 AGSVNDVFK----SEPSDLESTATSSVKRPRVEASHVLLEEIREINQRLIDTVVVISD-- 1260
GSV D +K SE SDLESTATS K+ R E H LLEEI+EINQRLIDTVV ISD
Sbjct: 1201 GGSVGDNYKQFAGSETSDLESTATSDGKKARTETEHALLEEIKEINQRLIDTVVEISDDE 1260
Query: 1261 EVVDPSALVAAAVGSEGTIVKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCS 1320
+ DPS + +++G EGT V+ SF AV+LSP+LK+ +S QMSPIQPLRLLVP +YPN S
Sbjct: 1261 DAADPSEVAISSIGCEGTTVRFSFIAVSLSPALKAHLSSTQMSPIQPLRLLVPCSYPNGS 1320
Query: 1321 PILLDKFPVEVSKEYEDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQ 1346
P LLDK PVE SKE EDLS KA +RF+I LR+LSQPMSL DIA+TWD CARAV+ EYAQQ
Sbjct: 1321 PSLLDKLPVETSKENEDLSSKAMARFNILLRSLSQPMSLKDIAKTWDACARAVICEYAQQ 1335
BLAST of Sed0011014 vs. TAIR 10
Match:
AT2G10440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). )
HSP 1 Score: 284.3 bits (726), Expect = 5.2e-76
Identity = 316/962 (32.85%), Postives = 462/962 (48.02%), Query Frame = 0
Query: 403 QQQHQLMAPQSNLSNLQQQQLGPQSNVSGLQQQQMHGIQSGNSNMQSNQHPVHMLQQNKA 462
Q+Q QL+ +NL P S + QQ G +S+ Q+N +H + Q K
Sbjct: 159 QEQEQLINQLTNL---------PTSRPNNRDQQ---GAFQVSSSQQNNNVTLHAMSQQKN 218
Query: 463 QMQQTPQNTSNLLSTQGQQ-GQLQSSQQLMSQIPLQSTQVQQQVPLQQQ-QPPNTMSH-E 522
+Q T+GQQ GQ Q P+ S Q +QQ P+QQ Q N H +
Sbjct: 219 NLQS---------MTRGQQVGQSQ---------PMMSQQYRQQYPMQQDPQNRNLQKHLD 278
Query: 523 LQQRLQAGGQAPSSLLQAQNVMD---QPKQLYHAQSA--LPETSSTSLDSTAQTGQANGG 582
Q QA SSL Q QN+ D QP+QL A + + S DST +T N G
Sbjct: 279 FVQNNTNQFQAASSLRQTQNITDQQNQPQQLERANPSILIMNIIVASQDSTGKTVNVNAG 338
Query: 583 DWQEEIYQKIKAMKDLYFIELKEMYQKILPKLQQFDSNPQQPKSEQ-LNKLRAFKGILER 642
+WQEE YQKIK +K++ L M+Q++ KL++ +S P QP Q + KL+A K +E
Sbjct: 339 NWQEETYQKIKKLKEMCLPVLSLMHQRVAEKLRETESLPPQPMQAQWIEKLKAGKLSMEH 398
Query: 643 LLSFLQVQKSSIVMGFKDKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQ 702
L+ FL V +SS+ +DK SQYE I+ F S + Q GQ P SQ
Sbjct: 399 LMFFLNVHRSSVSEKHRDKFSQYEYHILKFTKSQTMVLRPTQQQQGQFP--------PSQ 458
Query: 703 PQMTTLQSSENQINSQLHSASMQGSVAPVQQNNMNNMQHNSLSTFSGSAPQQNMMIPIQP 762
M T QS + ++ L+ + + P QN + + ++ I+P
Sbjct: 459 TAMQT-QSPQVHVSQSLYKEQRRSRLMPSSQN------------------EASSLLQIRP 518
Query: 763 GSNLESGQGNSLSSLQQVAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPN 822
L+ N + ++G++ S + RA N+ NISS+QS
Sbjct: 519 --KLDPRDENII----MASSGNVMLPSVKQNPRAVNT-------------NISSVQS--- 578
Query: 823 MLQHQHLKQQDPQQLMQSQQLKQQLHQRHLQQMKQQIMQQQQQQQQPQLHQQQPQLHQQG 882
+Q+Q++ Q+ QQQP QQG
Sbjct: 579 -------------------------------------LQKQKRFHHRQMQQQQP---QQG 638
Query: 883 KQQLSTQMQAHQMSHLNQMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTSFP 942
Q HQM E+ND++MR+ + K + +Q ++ + Q+
Sbjct: 639 NHQ-------HQM---QTNEMNDVRMRERVNIKARLLEQQVSSSQRQVPKQES------- 698
Query: 943 ISPPIFQAASPQVTQNSSPQ-VDQQSLLSSIAKTGTPLQSASSPFVPSPSTPLAPSPMPG 1002
+S Q+ +SSPQ VDQ L ++I KTGTPL S+ S FV APSP+PG
Sbjct: 699 ------NVSSSQIQNHSSPQLVDQHILPATINKTGTPLNSSGSAFVAP-----APSPVPG 758
Query: 1003 DSEKPTVSSLPNAGNTGQQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTV 1062
DSE P P +G ++ T S +GT +PLL V
Sbjct: 759 DSEMPISVESPVSG----VDEINSTLDSSSKLGT---QETPLL---------------FV 818
Query: 1063 SGKSSVTEQPLERLIKVVKSMTPKALSASVSGIGSVVSMIDRIAGSAPGN-GSRAAVGED 1122
+TE+P++RLIK ++ +PK+L+ SVS I SV+SM+D I GS P + GSRA +GED
Sbjct: 819 PPPEPITERPIDRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGED 878
Query: 1123 LVAMTKCRLQARNFVSHDGPNGTKKMRRYTSAMPLNVASSAGSVNDVFKSEPSDLESTAT 1182
L T RNF +H+ N +K+M+R + +P +++S S + E S++ ST +
Sbjct: 879 LSERT------RNFTTHEETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLE-SEVVSTTS 932
Query: 1183 SSVKRPRVEASHVLLEEIREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVKCSFSA 1242
S +K + + LL+EI+E N RL++TVV I DE S GTIV C+++
Sbjct: 939 SGLKVNNIAPGYALLQEIKETNGRLVETVVEICDE------------DSLGTIVTCTYAP 932
Query: 1243 VALSPSLKSQYTSAQM----------SPIQPLRLLVPTNYPNCSPILLDKFPVEVS-KEY 1302
VALS + K Y S ++ + IQPLRLL P +YP SPI+L++ + S +Y
Sbjct: 999 VALSATFKDHYKSGKIIFYVSKCLMQAQIQPLRLLFPMDYPYSSPIVLEEISFDTSVHKY 932
Query: 1303 EDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWEN 1343
EDLS + +SRFS+S++ S+P IA+TW+ CARA + EYA++ GGG+F SKYGAWE
Sbjct: 1059 EDLSARTRSRFSLSMKEFSEPGFSKGIAQTWNDCARATMVEYAERHGGGTFSSKYGAWET 932
BLAST of Sed0011014 vs. TAIR 10
Match:
AT2G10440.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). )
HSP 1 Score: 282.3 bits (721), Expect = 2.0e-75
Identity = 268/815 (32.88%), Postives = 402/815 (49.33%), Query Frame = 0
Query: 532 SSLLQAQNVMDQPKQLYHAQSALPETSSTSLDSTAQTGQANGGDWQEEIYQKIKAMKDLY 591
SS+ ++ + K ++ + S DST +T N G+WQEE YQKIK +K++
Sbjct: 186 SSIKLTKHSITDQKSVFDTTVLIMNIIVASQDSTGKTVNVNAGNWQEETYQKIKKLKEMC 245
Query: 592 FIELKEMYQKILPKLQQFDSNPQQPKSEQ-LNKLRAFKGILERLLSFLQVQKSSIVMGFK 651
L M+Q++ KL++ +S P QP Q + KL+A K +E L+ FL V +SS+ +
Sbjct: 246 LPVLSLMHQRVAEKLRETESLPPQPMQAQWIEKLKAGKLSMEHLMFFLNVHRSSVSEKHR 305
Query: 652 DKISQYERQIVSFLNSNRPRNSVSTLQPGQLPAAHMQSIQQSQPQMTTLQSSENQINSQL 711
DK SQYE I+ F S + Q GQ P SQ M T QS + ++ L
Sbjct: 306 DKFSQYEYHILKFTKSQTMVLRPTQQQQGQFP--------PSQTAMQT-QSPQVHVSQSL 365
Query: 712 HSASMQGSVAPVQQNNMNNMQHNSLSTFSGSAPQQNMMIPIQPGSNLESGQGNSLSSLQQ 771
+ + + P QN + + ++ I+P L+ N +
Sbjct: 366 YKEQRRSRLMPSSQN------------------EASSLLQIRP--KLDPRDENII----M 425
Query: 772 VAAGSLQQNSANSSQRANNSSLPSQNGVNALQQNISSLQSNPNMLQHQHLKQQDPQQLMQ 831
++G++ S + RA N+ NISS+QS
Sbjct: 426 ASSGNVMLPSVKQNPRAVNT-------------NISSVQS-------------------- 485
Query: 832 SQQLKQQLHQRHLQQMKQQIMQQQQQQQQPQLHQQQPQLHQQGKQQLSTQMQAHQMSHLN 891
+Q+Q++ Q+ QQQP QQG Q HQM
Sbjct: 486 --------------------LQKQKRFHHRQMQQQQP---QQGNHQ-------HQM---Q 545
Query: 892 QMEINDMKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTSFPISPPIFQAASPQVTQNS 951
E+ND++MR+ + K + +Q ++ + Q+ +S Q+ +S
Sbjct: 546 TNEMNDVRMRERVNIKARLLEQQVSSSQRQVPKQES-------------NVSSSQIQNHS 605
Query: 952 SPQ-VDQQSLLSSIAKTGTPLQSASSPFVPSPSTPLAPSPMPGDSEKPTVSSLPNAGNTG 1011
SPQ VDQ L ++I KTGTPL S+ S FV APSP+PGDSE P P +G
Sbjct: 606 SPQLVDQHILPATINKTGTPLNSSGSAFVAP-----APSPVPGDSEMPISVESPVSG--- 665
Query: 1012 QQTNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTVSGKSSVTEQPLERLIKV 1071
++ T S +GT +PLL V +TE+P++RLIK
Sbjct: 666 -VDEINSTLDSSSKLGT---QETPLL---------------FVPPPEPITERPIDRLIKA 725
Query: 1072 VKSMTPKALSASVSGIGSVVSMIDRIAGSAPGN-GSRAAVGEDLVAMTKCRLQARNFVSH 1131
++ +PK+L+ SVS I SV+SM+D I GS P + GSRA +GEDL T RNF +H
Sbjct: 726 FQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGEDLSERT------RNFTTH 785
Query: 1132 DGPNGTKKMRRYTSAMPLNVASSAGSVNDVFKSEPSDLESTATSSVKRPRVEASHVLLEE 1191
+ N +K+M+R + +P +++S S + E S++ ST +S +K + + LL+E
Sbjct: 786 EETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLE-SEVVSTTSSGLKVNNIAPGYALLQE 842
Query: 1192 IREINQRLIDTVVVISDEVVDPSALVAAAVGSEGTIVKCSFSAVALSPSLKSQYTSAQMS 1251
I+E N RL++TVV I DE S GTIV C+++ VALS + K Y S +++
Sbjct: 846 IKETNGRLVETVVEICDE------------DSLGTIVTCTYAPVALSATFKDHYKSGKIA 842
Query: 1252 PIQPLRLLVPTNYPNCSPILLDKFPVEVS-KEYEDLSIKAKSRFSISLRNLSQPMSLGDI 1311
IQPLRLL P +YP SPI+L++ + S +YEDLS + +SRFS+S++ S+P I
Sbjct: 906 QIQPLRLLFPMDYPYSSPIVLEEISFDTSVHKYEDLSARTRSRFSLSMKEFSEPGFSKGI 842
Query: 1312 ARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCL 1343
A+TW+ CARA + EYA++ GGG+F SKYGAWE L
Sbjct: 966 AQTWNDCARATMVEYAERHGGGTFSSKYGAWETVL 842
BLAST of Sed0011014 vs. TAIR 10
Match:
AT1G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 107.5 bits (267), Expect = 8.7e-23
Identity = 108/299 (36.12%), Postives = 149/299 (49.83%), Query Frame = 0
Query: 837 QLHQRHLQQMKQQIMQQQQQQQQPQLHQQQPQLHQQGKQQLSTQMQAHQMSHLNQMEIND 896
Q+HQR L ++ Q++ + QQ+ +HQ +Q E
Sbjct: 10 QIHQRDLNEIYQRVAAKLQQEDS----------------------LSHQKQRSDQFE--- 69
Query: 897 MKMRQGLGAKPGMFQQLPATQRPTYTHQQMKPGTSFPISPPIFQAASPQVTQNSSPQVDQ 956
K+++G GM + L + + +KP + + N ++
Sbjct: 70 -KLKRGKTVLEGMLRFL------SLSKSNIKPD---------LKDSMDYRKNNIMNFLNM 129
Query: 957 QSLLSSIAKTGTPLQSASSPFVPSPSTPLAPSPMPGDSEKPTV-----SSLPNAGNTGQQ 1016
QSL ++ K LQ S P PL+ + + T S+ AG+ QQ
Sbjct: 130 QSLRKTVQK----LQLTKSEIQPM-QQPLSQTVQDQSHDDQTTLQMQSMSMQGAGSRVQQ 189
Query: 1017 TNVSGTQAPSLAIGTPGISASPLLAEFSGTDGVYANALPTVSGKSSVTEQPLERLIKVVK 1076
Q SL IGTPGISASPLL E + DG N L + GKSS TE P+ERLI+ +K
Sbjct: 190 IRQGVLQ--SLEIGTPGISASPLLPELTSPDGNIINPLTSTCGKSSATELPIERLIRAMK 249
Query: 1077 SMTPKALSASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVSHDG 1131
S++P+ALS++V I SVVSM+DRIAGS PG GSRA+ G DLVAMTKC LQ RNF++ DG
Sbjct: 250 SISPQALSSAVCDIRSVVSMVDRIAGSVPGKGSRASFGVDLVAMTKCHLQERNFMTQDG 260
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022154411.1 | 0.0e+00 | 84.82 | mediator of RNA polymerase II transcription subunit 15a [Momordica charantia] | [more] |
| XP_022988664.1 | 0.0e+00 | 84.29 | mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbi... | [more] |
| KAG7022562.1 | 0.0e+00 | 84.41 | Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argy... | [more] |
| XP_022988663.1 | 0.0e+00 | 84.23 | mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbi... | [more] |
| XP_022967562.1 | 0.0e+00 | 84.28 | mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbi... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| F4I171 | 2.4e-307 | 53.79 | Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana ... | [more] |
| Q9SHV7 | 7.4e-75 | 32.85 | Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis ... | [more] |
| Q54UW4 | 1.6e-05 | 32.99 | Bromodomain-containing protein DDB_G0280777 OS=Dictyostelium discoideum OX=44689... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DNN0 | 0.0e+00 | 84.82 | mediator of RNA polymerase II transcription subunit 15a OS=Momordica charantia O... | [more] |
| A0A6J1JM75 | 0.0e+00 | 84.29 | mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucur... | [more] |
| A0A6J1JMY4 | 0.0e+00 | 84.23 | mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucur... | [more] |
| A0A6J1HR60 | 0.0e+00 | 84.28 | mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucur... | [more] |
| A0A6J1ELX0 | 0.0e+00 | 84.31 | mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucur... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G15780.1 | 1.7e-308 | 53.79 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
| AT2G10440.1 | 5.2e-76 | 32.85 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
| AT2G10440.2 | 2.0e-75 | 32.88 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
| AT1G15770.1 | 8.7e-23 | 36.12 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
