Sed0011004 (gene) Chayote v1

Overview


Name	Sed0011004
Type	gene
Organism	Sechium edule (Chayote v1)
Description	pathogenesis-related protein PR-4-like
Location	LG08: 31207309 .. 31208253 (-)
RNA-Seq Expression	Sed0011004
Synteny	Sed0011004

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTAAAAGAAAAAAAAAACCACAAACATCTGATAGAGAAATGGAGAGAGTAAGTTTGATGATGTTAGTTTTGGGTTTGTGCCTTGTAAGCTTGGCAAATGCTCAAAGTGCTTCAAATGTGAGGGCTACATATCACTATTACAACCCACAAAACATCAATTGGGATTACAATAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACCAGCCCTTAGAATGGCGTCGACGCTACGGTTGGACCGCCTTCTGCGGTCCTGTCGGTCCTCGTGGCCAAGCTTCGTGTGGTCGTTGTTTAAAGGTATGCTAGTCTTTCCTTGACGGGTTATAAAAGTTGTAAAACAAGCATCGTTAATAGTTCCTTTTTAATGTTGTTATCAATCATGGGTGAAGATACACTAGAAAAATAAGACTTTCAAAATGGATTTTGATTATTTTAGGATTTAGGGTTTAGGTTTAAGGTTTAGATCAAATTTATAATTTTTTAAAATTATAGATCGAATTTATAATTTAACCATAAAATTTGTTAGAAGTGATAAATTCTTTAAGAAAACCTTTACCTTTTTTTTATGCAATGATTGTTAGTAGTACTAAATTCAATTTATGGTTAAATAATGGTTTGATTAATCATAAAACGAATTGAAATTAAATGTGCAGGTGACCAACACAGACACAAAAGCTTCTACAATAGTAAGAATTGTTGATCAATGTTCTAATGGAGGGTTGGATTTGGATTATAATGTGTTTAAGAGCATAGACACCAATGGACAAGGATACGCACGTGGGAATCTCATTGTCAATTATGACTTTGTCAATTGTTAAACATTATTTTTCTTTCAATTCATTCTCCCTAAGAAGTGGAATGGAGAAAGGAAAATTATGTGGCATAATGAATAAAAAGTATGAATAAACTATGATCTTAAAAGCTTATCAATTTTATGAAGG

mRNA sequence

ATGTAAAAGAAAAAAAAAACCACAAACATCTGATAGAGAAATGGAGAGAGTAAGTTTGATGATGTTAGTTTTGGGTTTGTGCCTTGTAAGCTTGGCAAATGCTCAAAGTGCTTCAAATGTGAGGGCTACATATCACTATTACAACCCACAAAACATCAATTGGGATTACAATAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACCAGCCCTTAGAATGGCGTCGACGCTACGGTTGGACCGCCTTCTGCGGTCCTGTCGGTCCTCGTGGCCAAGCTTCGTGTGGTCGTTGTTTAAAGGTGACCAACACAGACACAAAAGCTTCTACAATAGTAAGAATTGTTGATCAATGTTCTAATGGAGGGTTGGATTTGGATTATAATGTGTTTAAGAGCATAGACACCAATGGACAAGGATACGCACGTGGGAATCTCATTGTCAATTATGACTTTGTCAATTGTTAAACATTATTTTTCTTTCAATTCATTCTCCCTAAGAAGTGGAATGGAGAAAGGAAAATTATGTGGCATAATGAATAAAAAGTATGAATAAACTATGATCTTAAAAGCTTATCAATTTTATGAAGG

Coding sequence (CDS)

ATGGAGAGAGTAAGTTTGATGATGTTAGTTTTGGGTTTGTGCCTTGTAAGCTTGGCAAATGCTCAAAGTGCTTCAAATGTGAGGGCTACATATCACTATTACAACCCACAAAACATCAATTGGGATTACAATAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACCAGCCCTTAGAATGGCGTCGACGCTACGGTTGGACCGCCTTCTGCGGTCCTGTCGGTCCTCGTGGCCAAGCTTCGTGTGGTCGTTGTTTAAAGGTGACCAACACAGACACAAAAGCTTCTACAATAGTAAGAATTGTTGATCAATGTTCTAATGGAGGGTTGGATTTGGATTATAATGTGTTTAAGAGCATAGACACCAATGGACAAGGATACGCACGTGGGAATCTCATTGTCAATTATGACTTTGTCAATTGTTAA

Protein sequence

MERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

Homology

[Close]

BLAST of Sed0011004 vs. NCBI nr
Match: XP_022143159.1 (pathogenesis-related protein PR-4-like [Momordica charantia])

HSP 1 Score: 255.4 bits (651), Expect = 2.9e-64
Identity = 116/141 (82.27%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 1   MERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLE 60
           MER  L+MLVLGLCL+ +ANAQSA+NVRATYH YNPQNINWDY +ASV+CATWDAN+PLE
Sbjct: 1   MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLE 60

Query: 61  WRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSI 120
           WRRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T+AS IVRIVDQC+NGGLDLD NVF SI
Sbjct: 61  WRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSI 120

Query: 121 DTNGQGYARGNLIVNYDFVNC 142
           DTNG G+ARG++ VNY FVNC
Sbjct: 121 DTNGNGHARGHMFVNYQFVNC 141

[Close]

BLAST of Sed0011004 vs. NCBI nr
Match: XP_038890575.1 (pathogenesis-related protein PR-4-like [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61
Identity = 116/142 (81.69%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MERVSLMM-LVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPL 60
           ME+ S+MM LVL L ++S+ANAQSA+NVRATYH YNPQNINWDY +ASVYCATWDAN+PL
Sbjct: 1   MEKGSIMMILVLALGVLSMANAQSANNVRATYHLYNPQNINWDYLRASVYCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKS 120
           EWRRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T ASTIVRIVDQCSNGGLDLD NVFK 
Sbjct: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASTIVRIVDQCSNGGLDLDVNVFKQ 120

Query: 121 IDTNGQGYARGNLIVNYDFVNC 142
           +DTNG G  RG+L VNY FVNC
Sbjct: 121 LDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of Sed0011004 vs. NCBI nr
Match: XP_023521169.1 (pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo] >XP_023547312.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.0 bits (619), Expect = 1.5e-60
Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 6   LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRY 65
           LM+L L L ++SLANAQSA+NVRATYH YNPQ+INWDY +ASV+CATWDAN+PLE+RRRY
Sbjct: 7   LMLLALALGILSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEFRRRY 66

Query: 66  GWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDTNGQ 125
           GWTAFCGPVGPRGQASCGRCL+VTNT+TKAS IVRIVDQCSNGGLDLD NVF+ IDTNG 
Sbjct: 67  GWTAFCGPVGPRGQASCGRCLRVTNTETKASEIVRIVDQCSNGGLDLDVNVFRRIDTNGN 126

Query: 126 GYARGNLIVNYDFVNC 142
           GY RG+LIVNY FVNC
Sbjct: 127 GYRRGHLIVNYQFVNC 142

[Close]

BLAST of Sed0011004 vs. NCBI nr
Match: XP_022946138.1 (pathogenesis-related protein P2-like [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 5.7e-60
Identity = 112/140 (80.00%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 2   ERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEW 61
           +R  LM+L L L ++SLANAQSA+NVRATYH YNPQ+INWDY +ASVYCATWDAN+PLE+
Sbjct: 3   KRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEF 62

Query: 62  RRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSID 121
           RRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T+AS IVRIVDQCSNGGLDLD NVF+ ID
Sbjct: 63  RRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDVNVFRRID 122

Query: 122 TNGQGYARGNLIVNYDFVNC 142
           TN  GY RG+LIVNY+FVNC
Sbjct: 123 TNRNGYQRGHLIVNYEFVNC 142

[Close]

BLAST of Sed0011004 vs. NCBI nr
Match: XP_004139237.1 (pathogenesis-related protein PR-4A [Cucumis sativus] >KGN60803.1 hypothetical protein Csa_019268 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 5.7e-60
Identity = 114/142 (80.28%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MERVSL-MMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPL 60
           ME+ S+ M+L+L L ++SLANAQSA+NVRATYH YNPQNINWDY KASVYCATWDAN+PL
Sbjct: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKS 120
           EWRRRY WTAFCGPVGPRGQASCGRCLKVTN +TKAST VRIVDQCSNGGLDLD   FK+
Sbjct: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKA 120

Query: 121 IDTNGQGYARGNLIVNYDFVNC 142
           IDTNG GY  G+L VNY+FVNC
Sbjct: 121 IDTNGNGYKNGHLKVNYEFVNC 142

[Close]

BLAST of Sed0011004 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.0e-55
Identity = 101/143 (70.63%), Postives = 115/143 (80.42%), Query Frame = 0


Query: 1   MERVSLMMLVLGL--CLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQP 60
           MERV+ + +   +   ++++A AQSA+NVRATYH YNPQNINWD   ASVYCATWDA++P
Sbjct: 1   MERVNKLCVAFFVINMMMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKP 60

Query: 61  LEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFK 120
           LEWRRRYGWTAFCGP GP GQASCGRCL+VTNT T     VRIVDQC NGGLDLD NVF 
Sbjct: 61  LEWRRRYGWTAFCGPAGPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFN 120

Query: 121 SIDTNGQGYARGNLIVNYDFVNC 142
            +DTNG GY RGNL VNY+FVNC
Sbjct: 121 RLDTNGLGYQRGNLNVNYEFVNC 143

[Close]

BLAST of Sed0011004 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-54
Identity = 98/145 (67.59%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MERVSLMMLVLGLCLVS----LANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDAN 60
           MERV+   L + L ++S    +A AQSA+NVR+TYH YNPQNINWD   AS +CATWDA+
Sbjct: 1   MERVNNYKLCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDAD 60

Query: 61  QPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNV 120
           +PL WR++YGWTAFCGP GPRGQ SCGRCL+VTNT T   T VRIVDQCSNGGLDLD NV
Sbjct: 61  KPLAWRQKYGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNV 120

Query: 121 FKSIDTNGQGYARGNLIVNYDFVNC 142
           F  +DTNG GY +G+L VNY+FVNC
Sbjct: 121 FNQLDTNGVGYQQGHLTVNYEFVNC 145

[Close]

BLAST of Sed0011004 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.9e-54
Identity = 98/145 (67.59%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MERVSLMMLVLGLCLVS----LANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDAN 60
           MERV+   L + L ++S    +A AQSA+NVR+TYH YNPQNINWD   AS +CATWDA+
Sbjct: 1   MERVNNYKLCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDAD 60

Query: 61  QPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNV 120
           +PL WR++YGWTAFCGP GPRGQ SCGRCL+VTNT T     VRIVDQCSNGGLDLD NV
Sbjct: 61  KPLAWRQKYGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNV 120

Query: 121 FKSIDTNGQGYARGNLIVNYDFVNC 142
           F  +DTNG GY +G+LIVNY+FVNC
Sbjct: 121 FNQLDTNGLGYQQGHLIVNYEFVNC 145

[Close]

BLAST of Sed0011004 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.0e-51
Identity = 87/119 (73.11%), Postives = 100/119 (84.03%), Query Frame = 0


Query: 23  SASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASC 82
           SA NVRATYH YNPQN+ WD N  S YC+TWDAN+PL WR++YGWTAFCGPVGPRG+ SC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 83  GRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC 142
           G+CL+VTNT T A T VRIVDQCSNGGLDLD NVF+ IDT+G G  +G+LIVNY FV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]

BLAST of Sed0011004 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.5e-50
Identity = 87/119 (73.11%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 23  SASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASC 82
           SA NVRATYH YNPQN+ WD N  S YC+TWDAN+P  WR +YGWTAFCGPVGPRG+ SC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 83  GRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC 142
           G+CL+VTNT T A T VRIVDQCSNGGLDLD NVF+ IDT+G G  +G+LIVNY FVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]

BLAST of Sed0011004 vs. ExPASy TrEMBL
Match: A0A6J1CNH9 (pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC111013095 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 116/141 (82.27%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 1   MERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLE 60
           MER  L+MLVLGLCL+ +ANAQSA+NVRATYH YNPQNINWDY +ASV+CATWDAN+PLE
Sbjct: 1   MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLE 60

Query: 61  WRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSI 120
           WRRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T+AS IVRIVDQC+NGGLDLD NVF SI
Sbjct: 61  WRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSI 120

Query: 121 DTNGQGYARGNLIVNYDFVNC 142
           DTNG G+ARG++ VNY FVNC
Sbjct: 121 DTNGNGHARGHMFVNYQFVNC 141

[Close]

BLAST of Sed0011004 vs. ExPASy TrEMBL
Match: A0A0A0LG76 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010380 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.8e-60
Identity = 114/142 (80.28%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MERVSL-MMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPL 60
           ME+ S+ M+L+L L ++SLANAQSA+NVRATYH YNPQNINWDY KASVYCATWDAN+PL
Sbjct: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKS 120
           EWRRRY WTAFCGPVGPRGQASCGRCLKVTN +TKAST VRIVDQCSNGGLDLD   FK+
Sbjct: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKA 120

Query: 121 IDTNGQGYARGNLIVNYDFVNC 142
           IDTNG GY  G+L VNY+FVNC
Sbjct: 121 IDTNGNGYKNGHLKVNYEFVNC 142

[Close]

BLAST of Sed0011004 vs. ExPASy TrEMBL
Match: A0A6J1G2Z1 (pathogenesis-related protein P2-like OS=Cucurbita moschata OX=3662 GN=LOC111450307 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.8e-60
Identity = 112/140 (80.00%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 2   ERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEW 61
           +R  LM+L L L ++SLANAQSA+NVRATYH YNPQ+INWDY +ASVYCATWDAN+PLE+
Sbjct: 3   KRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEF 62

Query: 62  RRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSID 121
           RRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T+AS IVRIVDQCSNGGLDLD NVF+ ID
Sbjct: 63  RRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDVNVFRRID 122

Query: 122 TNGQGYARGNLIVNYDFVNC 142
           TN  GY RG+LIVNY+FVNC
Sbjct: 123 TNRNGYQRGHLIVNYEFVNC 142

[Close]

BLAST of Sed0011004 vs. ExPASy TrEMBL
Match: A0A6J1G2U1 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450306 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.7e-60
Identity = 113/142 (79.58%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MERVS-LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPL 60
           ME+VS LM+L L L ++SLANAQSA+NVRATYH YNPQ+INWDY +ASV+CATWDAN+P+
Sbjct: 1   MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKS 120
           EWRR+YGWTAFCGPVGPRGQASCGRCL+VTNT+T AS IVRIVDQC+NGGLDLD NVFK 
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGQGYARGNLIVNYDFVNC 142
           IDTNG G  RG+LIVNY FVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of Sed0011004 vs. ExPASy TrEMBL
Match: A0A6J1KIN7 (pathogenesis-related protein P2-like OS=Cucurbita maxima OX=3661 GN=LOC111493584 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.0e-60
Identity = 110/136 (80.88%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 6   LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRY 65
           LM+L L L ++SL NAQSA+NVRATYH YNPQ+INWDY +ASVYCATWDAN+PLE+RRRY
Sbjct: 7   LMLLALALGILSLVNAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRY 66

Query: 66  GWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDTNGQ 125
           GWTAFCGPVGPRGQASCGRCL+VTNT+TKAS IVRIVDQCSNGGLDLD NVF+ IDTNG 
Sbjct: 67  GWTAFCGPVGPRGQASCGRCLRVTNTETKASEIVRIVDQCSNGGLDLDVNVFRRIDTNGN 126

Query: 126 GYARGNLIVNYDFVNC 142
           GY RG+LIV Y+FV+C
Sbjct: 127 GYRRGHLIVKYEFVSC 142

[Close]

BLAST of Sed0011004 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 188.7 bits (478), Expect = 3.1e-48
Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 22  QSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQAS 81
           +SASNVRATYH+YNP   NWD    S YC+TWDA++P  WR +YGWTAFCGP GPRGQAS
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 82  CGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC 141
           CG+CL+V NT T A+  VRIVDQCSNGGLDLD  +F  IDT+G GY +G+LIV+Y FV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:

BLAST of Sed0011004 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143159.1	2.9e-64	82.27	pathogenesis-related protein PR-4-like [Momordica charantia]	[more]
XP_038890575.1	2.3e-61	81.69	pathogenesis-related protein PR-4-like [Benincasa hispida]	[more]
XP_023521169.1	1.5e-60	82.35	pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo] >XP_023547312....	[more]
XP_022946138.1	5.7e-60	80.00	pathogenesis-related protein P2-like [Cucurbita moschata]	[more]
XP_004139237.1	5.7e-60	80.28	pathogenesis-related protein PR-4A [Cucumis sativus] >KGN60803.1 hypothetical pr...	[more]

BLAST of Sed0011004 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32045	2.0e-55	70.63	Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P29062	2.8e-54	67.59	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P29063	4.9e-54	67.59	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09761	5.0e-51	73.11	Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1	[more]
P09762	2.5e-50	73.11	Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1	[more]

BLAST of Sed0011004 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNH9	1.4e-64	82.27	pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LG76	2.8e-60	80.28	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010380 PE=4...	[more]
A0A6J1G2Z1	2.8e-60	80.00	pathogenesis-related protein P2-like OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A6J1G2U1	4.7e-60	79.58	pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KIN7	8.0e-60	80.88	pathogenesis-related protein P2-like OS=Cucurbita maxima OX=3661 GN=LOC111493584...	[more]

BLAST of Sed0011004 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04720.1	3.1e-48	67.50	pathogenesis-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 95..113 score: 80.7 coord: 76..94 score: 67.37 coord: 57..75 score: 74.74 coord: 116..140 score: 63.73
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 23..141 e-value: 2.1E-58 score: 195.4
IPR001153	Barwin domain	PROSITE	PS51174	BARWIN_3	coord: 22..141 score: 80.918213
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 22..141 e-value: 7.0E-57 score: 192.5
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 22..141
IPR044301	Pathogenesis-related protein-4	PANTHER	PTHR46351	WOUND-INDUCED PROTEIN WIN2	coord: 7..141
IPR018226	Barwin, conserved site	PROSITE	PS00772	BARWIN_2	coord: 134..141
IPR018226	Barwin, conserved site	PROSITE	PS00771	BARWIN_1	coord: 82..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011004.1	Sed0011004.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0006952	defense response
molecular_function	GO:0004540	ribonuclease activity