Sed0010987 (gene) Chayote v1

Overview


Name	Sed0010987
Type	gene
Organism	Sechium edule (Chayote v1)
Description	serine/arginine-rich splicing factor SC35
Location	LG10: 35432361 .. 35437010 (-)
RNA-Seq Expression	Sed0010987
Synteny	Sed0010987

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATATGTTTTTTTTTGGAAATATATGTAATATGTAATATCCGTTTTTTTCTTCTTCTTCATCTTCTTCATCTTCTGTGAAACCCTAACCCTAATTTTGATCTTGCAATCGAAATGTCTCACTTCGGAAGGTCAGGTCCGCCGGACATTGCAGACTCGTACTCGCTTCTCGTGCTCAACATCACCTTCCGTACATTTCTATCTCTTTCAAGGAATCTTTCTTCTTTCTTTTCCGTTTTCCTCTGAGCTTTTCATGCGTTTTTAGGCACCACCGGCGATGATCTTTACCCGCTTTTCAGCAAGTATGGCAAAGTTGTCGATGTCTTCATCCCCAGAGATCGAAGGTATCATTTCCTGCTTTCCCCTTTTCTTGATTTTCTTTAATTTCTGAAATAAATGATGGATTACGTATCTGCATATTTGGGAGGAGTTTCATGTTTGTTAGATTTTGCATTTAGAGTTATAGGATTGGAATTGATTTCCCTCGTTGATATTCATCTAGTTCTTGTGAAATTAGTTTGCACATCACGGTGATGTAGTATTCTTTATTGTCCCTGAGTGGCGGCGTAGTTGGTCGAAGACCTGGATTTTGAGGGTATGCTCCCTTTGAGTTCTTGGGTTTGAGATGACATTAATTTAGACACCTCCCAACTGGGTCTTTGTTCCTCCGATGTAGACTCGACTAGGGACGGGCTAGTGGTGCTTTGGAATTTCTGTCGATCTATTTACTTGTTGGGAATCAATCGTTCTTGTTTTGTCTATAGTTGCTCTTGTATTAATTTAGACACCTCCCAACTGGGTCTTCGTTCCTCTGATATAGACTCGACTAGGGATGGGCTAGTGGTGCTTTGGAATTTCTGTTCGATCTATTTTCTTGTTGGGAATCAATCGTTCTCGTTTTGTTTATAGTTGTCTCTTGTATTGTTTTTCGGATCAGGACTGGGGATTCTAGAGGTTTTGCATTTGTGCGTTACAAGTATGAAGATGAGGCTCAGAAAGCAGTGGACAAGCTACATGGTACCCATCCACTTAATCTCCTGTTGTTTGATTTTGTTCTTATCCTCTCCAAGTGCTAGTAATTTGTGGATACTTACAAGTTACAAGGAAAATGTTTGATAAGTTTGTTTGAGGATAGAAGGTTGATAATCTTGTGGACGCTATTCACATCATTTTTAGTTTTAGCTTATAATATCAAAATGTTCTGAAATGGACTCCCTCACTTCTTTATTTGTTATGGGTTTGACTTACAGTCATGCATCTATTCTTCCACATTTGATAAGTTCAATCTGGTGTTGGGGAGCTAATCTTTTGTATATGAATTTGAAGGCCATTTTACTTGTTGTTATGTTCCAGGCACTGTTATTGATGGACGGGATATAAGTGTTCGGTTTGCCAAATATGGTCCAAAAGCAGAAAAGATGTGAGTAATGAAGTAGTGGTTTTGCTCTCCTTCATTTTCAAAAAATGCTCAAACTTGGGGTCAACTTTTACCTGATATATATCTGTTAATGAGTGCTGTTTTTATGTCAAAATATGCTTTTAGTCACAAAGGAAGAATCAGTGAAGCTTTGCCAAAGTCAAAACGCTGGTCTAGAAGTCGTAGTCCACAGAGACGGTGATTTTCTCTTCCATATTCTTTAGTAATGCCTTCTCATATTCTGAAATTTATTTTTTAAGATTGAATGTTTGTTATCCTTGAAGAATCTTGCCCAGTTATTAGAGTTCCGTAGTGGAATTATTGATTCACCTGCTTTAGAAGTTCAAGGGTGATAGCTTCTGTTGAAATAGGATATTGGAGGAATGTGATGCAGCCATGTTTTTTGAAATAAGATTATTGTGATTACTGCATGTGCGAAATATTATTTAGCAAGCTCTTTTGGGGCTGTTTGTTTGACGTCTTTAGCTAGGAGTTAGGATTAGGATTTATTAACTCCTCGAAAACCTACGTCCAAACGAGTTTTTACCAACTCCTCCTTAATTTTACTTTTGAAAATAACTCTCATTTCTAACCATTCATTTTTAATCATTCATTTATAACTACTCAATCATTTCTAACCACTCATTTTTAATCATTCCTTTCAATCAATCAAAATAACTTATTTTTAACCACTCATTTTTAATCATTTCTTTTTAACTACTAAAAATAACTACTCATTTTTAAATCTACATCCAAACAAGGTTTTGACTATAACTCCTCTACACAAAATTCTCCAGTGTCTGGCCTAGGGATGGGCGTGGTTACCCTTGTTTCAAAAAAAAAACTCCTCTACACAAAAACTACATCCAAACGAATTTTTGGCACAACTCTCAATTTTTAACTCATCAATATAACTCCTTAACCTAAAAACTACCTAAATATGTCAAACAAACACCCCCTATGACTTATCAAATATGAGGTCCCAAGATGTTGCTTTGCCAAATGACGTCATTTGTTTTAAGACTAGCTATTGCATGCAATTTTATAATGAGATGTCACAATTCTGGAAATGTAAAATGTTGGAATTCAAAATCTAAAAAGGAGATTTTCTTTTTTTAATGTCCGTAAATGTTCAAATCAGCTTAAGAGCATTTCGACTATTCTCACGGTACATACCTCTTGATCTGGTCCTACAACATTTGGTTTCCAAGTAAACCCATAAGAAATTAATTCTTAAGTAAGTGGGCACCATCCATTGAACCCATAATCCTTTCGATCCTCATTGACCACTAAGCATACCTATGATCGTTATCTTAGTGTATTCTAATATATGGCTCGGATTAGGTAGTGGTGATAAAAGAATTTCCTTCTTGTAGTTCAAGGTTCATTTGCATGTGAAGTTACTAATTACAATTTCTTACTTTCTTGGATTATGTAGCTTATTAGGTCAATTTCTATTTTTGAAGTTTTTAATTTTTTTTTATTCAAGTTACTAATTAAAATTTTTGCTTTCAGACATCGGGATGATTATAGAGATAGAGATTATAGGAGGAGAAGCAAAAGCGTGGACAGGAGGGATCGTGATAGGCGTGGGAGGGAAAGAGACTATCGCAGGCAAAGTAGGAGCATCAGTCCCAAACGGCCTGGTCCTGATTACTCCAAGGGGAGGGGTAGAGGTCGTTATGAAGATGAGCGAAAAAGTCGAAGCCGAAGTCGTTCTGTGGATAGGTTGTAAGGCTATTGTAGTTTTATCCTGTTGGCTATTGCAAGAAGCGGGGAATTTTATTTCTAATCAGTCGTTGTTCTACATATTACAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAATCCGTCTCTTCGAAGGAGTCTTTCACCTTGTAGTCCATCTCCGAGGAGTGTAAGTCCGCAAAAAAATAGTGATGGTGGAAGGTCTCCAACTCCTAGGCATGGGAGGGAAAGAGACTACCGCAAGCGAAGTAGGAGCATCAGTCCTAAGCGGCCTAGTCTTGATTACTCCAAGGGGAGGGGAAGGGGTCGTTATGAAGATGAGCGTAAAAGTCGAAGCCGGAGTCGTTCTGTGGATAGGTTGTAAAGCTATTGTAGTTTTATCCTGTTGGCTATTGCAAAAGTGGGGAATTTTATTTCTAATCAGTCATTGTTCTACATATTACAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAATCTGTCTCTTCGAAGGAGTCTTTCACCTTGTAGTCCATCTCCGAGGAGTGTAAGTCCGCAAAAAAATAGTGATGGTGGAAGGTCTCCAACTCCTAGGCATGGGAGGGAAAGAGACTACCGCAAGCGAAGTAGGAGCATCAGTCCTAAGCGGCCTAGTCTTGATTACTCCAAGGGGAGGGGAAGGGGTCGTTATGAAGATGAGCGTAAAAGTCGAAGCCGAAGTCGTTCCGTGGATAGGTTGTAAAGCTATTGTAGTTTTATCCTGTTGGCTATTGCAAATAGTGGGGAATTTTATTTCTAATCAGTTATTGTTCTACATATTGCAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAACCTTTCTCTTCGAAGGAGTCTTTCACCTCGTAGTCCATCTCCCAGGGGTGTTAGTCCAAAAAATAATAGTGATGGTGGAAGGTCTCCAACTACTACGAGCATTTCACCACGAGGTCAACCTGATGATGCACGAAGCCCATCTCCACAAAACTCAGATGTTGATGTGAGTTGCTTGATGAGCTATTTTGAATGACTAGTCTGAACTTGGTTGAAGTAGCGTTAACTTTTGATTTGCTTTAATTTTGACAGGAGTGAATACATATGGATGCAACGAGAACTGCAGACGTAACCGAGCAGTGCAGTGAATGCTTCGAGGACATTCAATTAAAAATGTTGACTATAAGTTCTAGTTTTGGTAGGACTTTCCTATGGCGTCCAATTATTATATATCGAGCTTAATGTGCCTATCTACTTTCTTGTATCAGCATGATACTTTTTGGCTCTGCAATATGTATCCTTAATTCCAGTCGTAGGATATAGTTTAGGACATGTTCTTCCTCTAGATTTCGGTTCTCTACCCTGTAGTAATACTTTGAGCATTTGCTATGCCCTTTTCGTCTCCCTGTATTTTTCTTCAAAAAAATATTTGAGCTATCTCTCATTCATCATGAATCTTGTATTGGATTTTATAGTTACGTTCGGGGTAAA

mRNA sequence

GTAATATGTTTTTTTTTGGAAATATATGTAATATGTAATATCCGTTTTTTTCTTCTTCTTCATCTTCTTCATCTTCTGTGAAACCCTAACCCTAATTTTGATCTTGCAATCGAAATGTCTCACTTCGGAAGGTCAGGTCCGCCGGACATTGCAGACTCGTACTCGCTTCTCGTGCTCAACATCACCTTCCGCACCACCGGCGATGATCTTTACCCGCTTTTCAGCAAGTATGGCAAAGTTGTCGATGTCTTCATCCCCAGAGATCGAAGGACTGGGGATTCTAGAGGTTTTGCATTTGTGCGTTACAAGTATGAAGATGAGGCTCAGAAAGCAGTGGACAAGCTACATGGCACTGTTATTGATGGACGGGATATAAGTGTTCGGTTTGCCAAATATGGTCCAAAAGCAGAAAAGATTCACAAAGGAAGAATCAGTGAAGCTTTGCCAAAGTCAAAACGCTGGTCTAGAAGTCGTAGTCCACAGAGACGACATCGGGATGATTATAGAGATAGAGATTATAGGAGGAGAAGCAAAAGCGTGGACAGGAGGGATCGTGATAGGCGTGGGAGGGAAAGAGACTATCGCAGGCAAAGTAGGAGCATCAGTCCCAAACGGCCTGGTCCTGATTACTCCAAGGGGAGGGGTAGAGGTCGTTATGAAGATGAGCGAAAAAGTCGAAGCCGAAGTCGTTCTGTGGATAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAATCCGTCTCTTCGAAGGAGTCTTTCACCTTGTAGTCCATCTCCGAGGAGTGTAAGTCCGCAAAAAAATAGTGATGGTGGAAGGTCTCCAACTCCTAGGCATGGGAGGGAAAGAGACTACCGCAAGCGAAGTAGGAGCATCAGTCCTAAGCGGCCTAGTCTTGATTACTCCAAGGGGAGGGGAAGGGGTCGTTATGAAGATGAGCGTAAAAGTCGAAGCCGGAGTCGTTCTGTGGATAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAATCTGTCTCTTCGAAGGAGTCTTTCACCTTGTAGTCCATCTCCGAGGAGTGTAAGTCCGCAAAAAAATAGTGATGGTGGAAGGTCTCCAACTCCTAGGCATGGGAGGGAAAGAGACTACCGCAAGCGAAGTAGGAGCATCAGTCCTAAGCGGCCTAGTCTTGATTACTCCAAGGGGAGGGGAAGGGGTCGTTATGAAGATGAGCGTAAAAGTCGAAGCCGAAGTCGTTCCGTGGATAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAACCTTTCTCTTCGAAGGAGTCTTTCACCTCGTAGTCCATCTCCCAGGGGTGTTAGTCCAAAAAATAATAGTGATGGTGGAAGGTCTCCAACTACTACGAGCATTTCACCACGAGGTCAACCTGATGATGCACGAAGCCCATCTCCACAAAACTCAGATGTTGATGAGTGAATACATATGGATGCAACGAGAACTGCAGACGTAACCGAGCAGTGCAGTGAATGCTTCGAGGACATTCAATTAAAAATGTTGACTATAAGTTCTAGTTTTGGTAGGACTTTCCTATGGCGTCCAATTATTATATATCGAGCTTAATGTGCCTATCTACTTTCTTGTATCAGCATGATACTTTTTGGCTCTGCAATATGTATCCTTAATTCCAGTCGTAGGATATAGTTTAGGACATGTTCTTCCTCTAGATTTCGGTTCTCTACCCTGTAGTAATACTTTGAGCATTTGCTATGCCCTTTTCGTCTCCCTGTATTTTTCTTCAAAAAAATATTTGAGCTATCTCTCATTCATCATGAATCTTGTATTGGATTTTATAGTTACGTTCGGGGTAAA

Coding sequence (CDS)

ATGTCTCACTTCGGAAGGTCAGGTCCGCCGGACATTGCAGACTCGTACTCGCTTCTCGTGCTCAACATCACCTTCCGCACCACCGGCGATGATCTTTACCCGCTTTTCAGCAAGTATGGCAAAGTTGTCGATGTCTTCATCCCCAGAGATCGAAGGACTGGGGATTCTAGAGGTTTTGCATTTGTGCGTTACAAGTATGAAGATGAGGCTCAGAAAGCAGTGGACAAGCTACATGGCACTGTTATTGATGGACGGGATATAAGTGTTCGGTTTGCCAAATATGGTCCAAAAGCAGAAAAGATTCACAAAGGAAGAATCAGTGAAGCTTTGCCAAAGTCAAAACGCTGGTCTAGAAGTCGTAGTCCACAGAGACGACATCGGGATGATTATAGAGATAGAGATTATAGGAGGAGAAGCAAAAGCGTGGACAGGAGGGATCGTGATAGGCGTGGGAGGGAAAGAGACTATCGCAGGCAAAGTAGGAGCATCAGTCCCAAACGGCCTGGTCCTGATTACTCCAAGGGGAGGGGTAGAGGTCGTTATGAAGATGAGCGAAAAAGTCGAAGCCGAAGTCGTTCTGTGGATAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAATCCGTCTCTTCGAAGGAGTCTTTCACCTTGTAGTCCATCTCCGAGGAGTGTAAGTCCGCAAAAAAATAGTGATGGTGGAAGGTCTCCAACTCCTAGGCATGGGAGGGAAAGAGACTACCGCAAGCGAAGTAGGAGCATCAGTCCTAAGCGGCCTAGTCTTGATTACTCCAAGGGGAGGGGAAGGGGTCGTTATGAAGATGAGCGTAAAAGTCGAAGCCGGAGTCGTTCTGTGGATAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAATCTGTCTCTTCGAAGGAGTCTTTCACCTTGTAGTCCATCTCCGAGGAGTGTAAGTCCGCAAAAAAATAGTGATGGTGGAAGGTCTCCAACTCCTAGGCATGGGAGGGAAAGAGACTACCGCAAGCGAAGTAGGAGCATCAGTCCTAAGCGGCCTAGTCTTGATTACTCCAAGGGGAGGGGAAGGGGTCGTTATGAAGATGAGCGTAAAAGTCGAAGCCGAAGTCGTTCCGTGGATAGTGCTTCTCGTGGTAGACGAAGCCCTAGTCCAAGGAAGAACCTTTCTCTTCGAAGGAGTCTTTCACCTCGTAGTCCATCTCCCAGGGGTGTTAGTCCAAAAAATAATAGTGATGGTGGAAGGTCTCCAACTACTACGAGCATTTCACCACGAGGTCAACCTGATGATGCACGAAGCCCATCTCCACAAAACTCAGATGTTGATGAGTGA

Protein sequence

MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFAFVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSRSPQRRHRDDYRDRDYRRRSKSVDRRDRDRRGRERDYRRQSRSISPKRPGPDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNLSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNLSLRRSLSPRSPSPRGVSPKNNSDGGRSPTTTSISPRGQPDDARSPSPQNSDVDE

Homology

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BLAST of Sed0010987 vs. NCBI nr
Match: XP_023529917.1 (serine/arginine-rich splicing factor SC35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.5 bits (924), Expect = 2.1e-95
Identity = 240/457 (52.52%), Postives = 269/457 (58.86%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAVD+L GTV+DGR+I+V+FAKYGP AEKI KG+ISE  PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVDRLDGTVVDGREITVQFAKYGPNAEKIQKGKISEPFPKSRHRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR----RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGPDY 180
           SP+RR+RDDYRDRDYRR    RS+S+DR DRDRRG    RERDYRR+SRSISP+RP PDY
Sbjct: 121 SPRRRYRDDYRDRDYRRRSRSRSRSLDRSDRDRRGRERERERDYRRRSRSISPRRPSPDY 180

Query: 181 SKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNS 240
           SKGRGRGRY DER++RSRS S                                       
Sbjct: 181 SKGRGRGRYVDERRNRSRSHS--------------------------------------- 240

Query: 241 DGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYEDERKSRSRSRSVDSASRG 300
                                                        +SR RSRSV+SAS G
Sbjct: 241 ---------------------------------------------RSRGRSRSVNSASPG 300

Query: 301 RRSPSPRKNLSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRP 360
           RRSPSPR++LS RRSLSP                                  RS+SP   
Sbjct: 301 RRSPSPRRSLSPRRSLSP---------------------------------RRSLSP--- 305

Query: 361 SLDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNLSLRRSLSP-RSPSPRGVS 420
                                           RRS SPR++LS +RSLSP RSPSPRG S
Sbjct: 361 --------------------------------RRSLSPRRSLSPQRSLSPRRSPSPRGES 305

Query: 421 PKNNSDGGRSPTTTSISPRGQPDDARSPSPQNSDVDE 449
           P+ N DGGRSPT  S+SPRGQP D+RSPSPQNSDVD+
Sbjct: 421 PERNGDGGRSPTPRSVSPRGQPVDSRSPSPQNSDVDK 305

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BLAST of Sed0010987 vs. NCBI nr
Match: XP_004136874.2 (serine/arginine-rich splicing factor SC35 [Cucumis sativus] >KGN43716.1 hypothetical protein Csa_017162 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 9.5e-93
Identity = 201/278 (72.30%), Postives = 229/278 (82.37%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAV++L GT++DGR+I+V+FAKYGP AE+IHKG+ISEA PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR------RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGP 180
           SP+RRHRDDYRD+DYRR      RS+S+D+ DRDRRG    RERD+RR+SRSISP+RP P
Sbjct: 121 SPRRRHRDDYRDKDYRRRSRSRSRSRSLDKNDRDRRGRERERERDHRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYEDERKSRS--------RSRSVDSASRGRRSPSPRKNPSLRRSLSP-CSP 240
           DYSKGRGRGRY+DER+SRS        RSRSVDS S GRRSPSPR++PS RRSLSP  SP
Sbjct: 181 DYSKGRGRGRYDDERRSRSLSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240

Query: 241 SPRSVSPQKNSDG-GRSPTPRHGRERDYRKRSRSISPK 259
           SPR  SP++N +G GRSPT R    R     SRS SP+
Sbjct: 241 SPREESPERNGNGVGRSPTSRSVSPRGRPADSRSPSPQ 278

[Close]

BLAST of Sed0010987 vs. NCBI nr
Match: XP_008455209.1 (PREDICTED: serine/arginine-rich splicing factor SC35 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 1.2e-92
Identity = 202/278 (72.66%), Postives = 229/278 (82.37%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAV++L GT++DGR+I+V+FAKYGP AE+IHKG+ISEA PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR------RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGP 180
           SP+RR+RDDYRDRDYRR      RS+S+DR DRDRRG    RERD+RR+SRSISP+RP P
Sbjct: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYEDERKSRS--------RSRSVDSASRGRRSPSPRKNPSLRRSLSP-CSP 240
           DYSKGRGRGRY+DER+SRS        RSRSVDS S GRRSPSPR++PS RRSLSP  SP
Sbjct: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240

Query: 241 SPRSVSPQKNSD-GGRSPTPRHGRERDYRKRSRSISPK 259
           SPR  SP++N + GGRSPT R    R     SRS SP+
Sbjct: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQ 278

[Close]

BLAST of Sed0010987 vs. NCBI nr
Match: XP_038888048.1 (serine/arginine-rich splicing factor SC35 [Benincasa hispida])

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-92
Identity = 202/285 (70.88%), Postives = 230/285 (80.70%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAV++L GT++DGR+I+V+FAKYGP AE+IHKG+ISEA PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYKSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR------RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGP 180
           SP+RR+RDDYRDRDYRR      RS+S DR DRDRRG    RER+YRR+SRSISP+RP P
Sbjct: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSFDRSDRDRRGREKEREREYRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYEDERKSRS----------RSRSVDSASRGRRSPSPRKNPSLRRSLSP-C 240
           DYSKGRGRGRY+DER+SRS          RSRSVDS S GR+SPSPR++PS RRSLSP  
Sbjct: 181 DYSKGRGRGRYDDERRSRSRSRSRSRSRGRSRSVDSGSPGRQSPSPRRSPSPRRSLSPRR 240

Query: 241 SPSPRSVSPQKNSD-GGRSPTPRHGRERDYRKRSRSISPKRPSLD 264
           SPSPR  SP++N + GGRSPT R    R     SRS SP+   +D
Sbjct: 241 SPSPRGGSPERNGNGGGRSPTSRSVSPRGRPTDSRSPSPQNSDVD 285

[Close]

BLAST of Sed0010987 vs. NCBI nr
Match: XP_022927926.1 (serine/arginine-rich splicing factor SC35-like [Cucurbita moschata] >KAG6588771.1 Serine/arginine-rich splicing factor SC35, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-91
Identity = 232/456 (50.88%), Postives = 260/456 (57.02%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAVD+L GTV+DGR+I+V+FAKYGP AEKI KG+ISE  PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVDRLDGTVVDGREITVQFAKYGPNAEKIQKGKISEPFPKSRHRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR----RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGPDY 180
           SP+RR+RDDYRDRDYRR    RS+S+DR DRDRRG    RERDYRR+SRSISP+RP PDY
Sbjct: 121 SPRRRYRDDYRDRDYRRRSRSRSRSLDRSDRDRRGRERERERDYRRRSRSISPRRPSPDY 180

Query: 181 SKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNS 240
           SKGRGRGRY DER++RSRS S                                       
Sbjct: 181 SKGRGRGRYVDERRNRSRSHS--------------------------------------- 240

Query: 241 DGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYEDERKSRSRSRSVDSASRG 300
                                                        +SR RSRSV+SAS G
Sbjct: 241 ---------------------------------------------RSRGRSRSVNSASPG 293

Query: 301 RRSPSPRKNLSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRP 360
           RRSPSPR++LS RRSLSP     RS+SPQ                       RS+SP+  
Sbjct: 301 RRSPSPRRSLSPRRSLSP----RRSLSPQ-----------------------RSLSPR-- 293

Query: 361 SLDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNLSLRRSLSPRSPSPRGVSP 420
                                                             RSPSPRG SP
Sbjct: 361 --------------------------------------------------RSPSPRGESP 293

Query: 421 KNNSDGGRSPTTTSISPRGQPDDARSPSPQNSDVDE 449
           + N DGGRSPT  S+SPRGQP D+RSPSPQNSDVD+
Sbjct: 421 ERNGDGGRSPTPRSVSPRGQPADSRSPSPQNSDVDK 293

[Close]

BLAST of Sed0010987 vs. ExPASy Swiss-Prot
Match: Q9FMG4 (Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana OX=3702 GN=SC35 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.5e-64
Identity = 174/327 (53.21%), Postives = 211/327 (64.53%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+D+YSLLVLNITFRTT DDLYPLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRW---- 120
           FVRYKY+DEA KAV++L G V+DGR+I+V+FAKYGP AEKI KGR+ E  PKS+R     
Sbjct: 61  FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS 120

Query: 121 -------------------SRSRSPQRRHRDDYRDRDYRR--RSKSVDRRDRDRRGRERD 180
                               RSRSP+RR RDDYR++DYR+  RS+S DRR+R    ++RD
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEE-KDRD 180

Query: 181 YRRQSRSISPKRPGPDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNPSLRRS 240
           +RR++RS   +   PD  K R RGRY++E +S SRS S   A R  RS SP+K       
Sbjct: 181 HRRRTRS---RSASPD-EKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQKT------ 240

Query: 241 LSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYED 294
               SP+ R VSP K S+  RSP+PR           RS+SP+ P+L   K         
Sbjct: 241 ----SPA-REVSPDKRSN-ERSPSPR-----------RSLSPRSPAL--QKASPSKEMSP 297

[Close]

BLAST of Sed0010987 vs. ExPASy Swiss-Prot
Match: P30352 (Serine/arginine-rich splicing factor 2 OS=Gallus gallus OX=9031 GN=SRSF2 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.0e-24
Identity = 105/257 (40.86%), Postives = 135/257 (52.53%), Query Frame = 0


Query: 4   FGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFAFVR 63
           +GR  PPD+    SL V N+T+RT+ D L  +F KYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 3   YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62

Query: 64  YKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSRSPQ 123
           +  + +A+ A+D + G V+DGR++ V+ A+YG   +  H              SR   P 
Sbjct: 63  FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH--------------SRRGPPP 122

Query: 124 RRHRDDYRDRDYRRRSKSVDRRDRDRRGRERDYRRQSRSISPKRPGPDYSKGRGRGRYED 183
           RR    Y    Y RRS+S  R            RR+SRS S  R     S+ R R RY  
Sbjct: 123 RR----YGSSGYGRRSRSPRR------------RRRSRSRSRSR-----SRSRSRSRY-S 182

Query: 184 ERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHG 243
             KSRSR+RS        RS S  K+ S RRS S  S   RS S  ++    RSP P   
Sbjct: 183 RSKSRSRTRS--------RSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPTSK 213

Query: 244 RERDYRKRSRSISPKRP 261
           RE + R RS+S  PK P
Sbjct: 243 RESNSRSRSKS-PPKSP 213

[Close]

BLAST of Sed0010987 vs. ExPASy Swiss-Prot
Match: Q06A98 (Serine/arginine-rich splicing factor 2 OS=Sus scrofa OX=9823 GN=SRSF2 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.7e-24
Identity = 105/257 (40.86%), Postives = 134/257 (52.14%), Query Frame = 0


Query: 4   FGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFAFVR 63
           +GR  PPD+    SL V N+T+RT+ D L  +F KYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 3   YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62

Query: 64  YKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSRSPQ 123
           +  + +A+ A+D + G V+DGR++ V+ A+YG   +  H              SR   P 
Sbjct: 63  FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH--------------SRRGPPP 122

Query: 124 RRHRDDYRDRDYRRRSKSVDRRDRDRRGRERDYRRQSRSISPKRPGPDYSKGRGRGRYED 183
           RR    Y    Y RRS+S  R            RR+SRS S  R     S+ R R RY  
Sbjct: 123 RR----YGGGGYGRRSRSPRR------------RRRSRSRSRSR-----SRSRSRSRY-S 182

Query: 184 ERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHG 243
             KSRSR+RS        RS S  K+ S RRS S  S   RS S  ++    RSP P   
Sbjct: 183 RSKSRSRTRS--------RSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPASK 213

Query: 244 RERDYRKRSRSISPKRP 261
           RE   R RS+S  PK P
Sbjct: 243 RESKSRSRSKS-PPKSP 213

[Close]

BLAST of Sed0010987 vs. ExPASy Swiss-Prot
Match: Q3MHR5 (Serine/arginine-rich splicing factor 2 OS=Bos taurus OX=9913 GN=SRSF2 PE=2 SV=3)

HSP 1 Score: 112.8 bits (281), Expect = 9.8e-24
Identity = 105/257 (40.86%), Postives = 134/257 (52.14%), Query Frame = 0


Query: 4   FGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFAFVR 63
           +GR  PPD+    SL V N+T+RT+ D L  +F KYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 3   YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62

Query: 64  YKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSRSPQ 123
           +  + +A+ A+D + G V+DGR++ V+ A+YG   +  H              SR   P 
Sbjct: 63  FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH--------------SRRGPPP 122

Query: 124 RRHRDDYRDRDYRRRSKSVDRRDRDRRGRERDYRRQSRSISPKRPGPDYSKGRGRGRYED 183
           RR    Y    Y RRS+S  R            RR+SRS S  R     S+ R R RY  
Sbjct: 123 RR----YGGGGYGRRSRSPRR------------RRRSRSRSRSR-----SRSRSRSRY-S 182

Query: 184 ERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHG 243
             KSRSR+RS        RS S  K+ S RRS S  S   RS S  ++    RSP P   
Sbjct: 183 RSKSRSRTRS--------RSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSK 213

Query: 244 RERDYRKRSRSISPKRP 261
           RE   R RS+S  PK P
Sbjct: 243 RESKSRSRSKS-PPKSP 213

[Close]

BLAST of Sed0010987 vs. ExPASy Swiss-Prot
Match: Q01130 (Serine/arginine-rich splicing factor 2 OS=Homo sapiens OX=9606 GN=SRSF2 PE=1 SV=4)

HSP 1 Score: 112.8 bits (281), Expect = 9.8e-24
Identity = 105/257 (40.86%), Postives = 134/257 (52.14%), Query Frame = 0


Query: 4   FGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFAFVR 63
           +GR  PPD+    SL V N+T+RT+ D L  +F KYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 3   YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62

Query: 64  YKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSRSPQ 123
           +  + +A+ A+D + G V+DGR++ V+ A+YG   +  H              SR   P 
Sbjct: 63  FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH--------------SRRGPPP 122

Query: 124 RRHRDDYRDRDYRRRSKSVDRRDRDRRGRERDYRRQSRSISPKRPGPDYSKGRGRGRYED 183
           RR    Y    Y RRS+S  R            RR+SRS S  R     S+ R R RY  
Sbjct: 123 RR----YGGGGYGRRSRSPRR------------RRRSRSRSRSR-----SRSRSRSRY-S 182

Query: 184 ERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHG 243
             KSRSR+RS        RS S  K+ S RRS S  S   RS S  ++    RSP P   
Sbjct: 183 RSKSRSRTRS--------RSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSK 213

Query: 244 RERDYRKRSRSISPKRP 261
           RE   R RS+S  PK P
Sbjct: 243 RESKSRSRSKS-PPKSP 213

[Close]

BLAST of Sed0010987 vs. ExPASy TrEMBL
Match: A0A0A0K7C0 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062820 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 4.6e-93
Identity = 201/278 (72.30%), Postives = 229/278 (82.37%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAV++L GT++DGR+I+V+FAKYGP AE+IHKG+ISEA PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR------RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGP 180
           SP+RRHRDDYRD+DYRR      RS+S+D+ DRDRRG    RERD+RR+SRSISP+RP P
Sbjct: 121 SPRRRHRDDYRDKDYRRRSRSRSRSRSLDKNDRDRRGRERERERDHRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYEDERKSRS--------RSRSVDSASRGRRSPSPRKNPSLRRSLSP-CSP 240
           DYSKGRGRGRY+DER+SRS        RSRSVDS S GRRSPSPR++PS RRSLSP  SP
Sbjct: 181 DYSKGRGRGRYDDERRSRSLSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240

Query: 241 SPRSVSPQKNSDG-GRSPTPRHGRERDYRKRSRSISPK 259
           SPR  SP++N +G GRSPT R    R     SRS SP+
Sbjct: 241 SPREESPERNGNGVGRSPTSRSVSPRGRPADSRSPSPQ 278

[Close]

BLAST of Sed0010987 vs. ExPASy TrEMBL
Match: A0A1S3C0I4 (serine/arginine-rich splicing factor SC35 OS=Cucumis melo OX=3656 GN=LOC103495427 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 6.0e-93
Identity = 202/278 (72.66%), Postives = 229/278 (82.37%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAV++L GT++DGR+I+V+FAKYGP AE+IHKG+ISEA PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR------RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGP 180
           SP+RR+RDDYRDRDYRR      RS+S+DR DRDRRG    RERD+RR+SRSISP+RP P
Sbjct: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYEDERKSRS--------RSRSVDSASRGRRSPSPRKNPSLRRSLSP-CSP 240
           DYSKGRGRGRY+DER+SRS        RSRSVDS S GRRSPSPR++PS RRSLSP  SP
Sbjct: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240

Query: 241 SPRSVSPQKNSD-GGRSPTPRHGRERDYRKRSRSISPK 259
           SPR  SP++N + GGRSPT R    R     SRS SP+
Sbjct: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQ 278

[Close]

BLAST of Sed0010987 vs. ExPASy TrEMBL
Match: A0A6J1EIV3 (serine/arginine-rich splicing factor SC35-like OS=Cucurbita moschata OX=3662 GN=LOC111434683 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 232/456 (50.88%), Postives = 260/456 (57.02%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAVD+L GTV+DGR+I+V+FAKYGP AEKI KG+ISE  PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVDRLDGTVVDGREITVQFAKYGPNAEKIQKGKISEPFPKSRHRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR----RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGPDY 180
           SP+RR+RDDYRDRDYRR    RS+S+DR DRDRRG    RERDYRR+SRSISP+RP PDY
Sbjct: 121 SPRRRYRDDYRDRDYRRRSRSRSRSLDRSDRDRRGRERERERDYRRRSRSISPRRPSPDY 180

Query: 181 SKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNS 240
           SKGRGRGRY DER++RSRS S                                       
Sbjct: 181 SKGRGRGRYVDERRNRSRSHS--------------------------------------- 240

Query: 241 DGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYEDERKSRSRSRSVDSASRG 300
                                                        +SR RSRSV+SAS G
Sbjct: 241 ---------------------------------------------RSRGRSRSVNSASPG 293

Query: 301 RRSPSPRKNLSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRP 360
           RRSPSPR++LS RRSLSP     RS+SPQ                       RS+SP+  
Sbjct: 301 RRSPSPRRSLSPRRSLSP----RRSLSPQ-----------------------RSLSPR-- 293

Query: 361 SLDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNLSLRRSLSPRSPSPRGVSP 420
                                                             RSPSPRG SP
Sbjct: 361 --------------------------------------------------RSPSPRGESP 293

Query: 421 KNNSDGGRSPTTTSISPRGQPDDARSPSPQNSDVDE 449
           + N DGGRSPT  S+SPRGQP D+RSPSPQNSDVD+
Sbjct: 421 ERNGDGGRSPTPRSVSPRGQPADSRSPSPQNSDVDK 293

[Close]

BLAST of Sed0010987 vs. ExPASy TrEMBL
Match: A0A6J1JE82 (serine/arginine-rich splicing factor SC35-like OS=Cucurbita maxima OX=3661 GN=LOC111486086 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91
Identity = 232/457 (50.77%), Postives = 263/457 (57.55%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAVD+L GTV+DGR+I+V+FAKYGP AEKI KG+ISE  PKS+  SRSR
Sbjct: 61  FVRYKYADEAQKAVDRLDGTVVDGREITVQFAKYGPNAEKIQKGKISEPFPKSRHRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR----RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGPDY 180
           SP+RR+RD+YRDRDYRR    RS+S+DR DRDRRG    RERDYRR+SRSISP+RP PDY
Sbjct: 121 SPRRRYRDNYRDRDYRRRSRSRSRSLDRSDRDRRGRERERERDYRRRSRSISPRRPSPDY 180

Query: 181 SKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNS 240
           SKGRGRGRY DER++RSRS S                                       
Sbjct: 181 SKGRGRGRYVDERRNRSRSHS--------------------------------------- 240

Query: 241 DGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYEDERKSRSRSRSVDSASRG 300
                                                        +SR RSRSV+SAS G
Sbjct: 241 ---------------------------------------------RSRGRSRSVNSASPG 299

Query: 301 RRSPSPRKNLSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRP 360
           RRSPSPR++LS RRSLSP                                          
Sbjct: 301 RRSPSPRRSLSPRRSLSP------------------------------------------ 299

Query: 361 SLDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNLSLRRSLSP-RSPSPRGVS 420
                                           RRS SP+++LS +RSLSP RSPSPRG S
Sbjct: 361 --------------------------------RRSLSPQRSLSPQRSLSPRRSPSPRGES 299

Query: 421 PKNNSDGGRSPTTTSISPRGQPDDARSPSPQNSDVDE 449
           P+ N DGGRSPT  S+SPRGQ  D+RSPSPQNSDV++
Sbjct: 421 PERNGDGGRSPTPRSVSPRGQSADSRSPSPQNSDVNK 299

[Close]

BLAST of Sed0010987 vs. ExPASy TrEMBL
Match: A0A6J1CKN2 (serine/arginine-rich splicing factor SC35 OS=Momordica charantia OX=3673 GN=LOC111012175 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 4.8e-90
Identity = 200/284 (70.42%), Postives = 223/284 (78.52%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI D+YSLLVLNITFRTT DDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSR 120
           FVRYKY DEAQKAV++L GTV+DGR+I+V+FAKYGP AE+IHKG+ISEA  K +  SRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTVVDGREITVQFAKYGPNAERIHKGKISEAFTKPRYRSRSR 120

Query: 121 SPQRRHRDDYRDRDYRR------RSKSVDRRDRDRRG----RERDYRRQSRSISPKRPGP 180
           SP+RR+RDD RDRDYRR      RS+S+DR DRDRRG    RERDYRR+SRSISP+RP P
Sbjct: 121 SPRRRYRDDNRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDYRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYEDERKSRSR----------SRSVDSASRGRRSPSPRKNPSLRRSLSP-C 240
           DYSKGRGRGRY+DER+SRSR          SRSVDSAS GRRS SP      RRSLSP  
Sbjct: 181 DYSKGRGRGRYDDERRSRSRSCSRSQSRGQSRSVDSASPGRRSASP------RRSLSPQR 240

Query: 241 SPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRPSLD 264
           SPSPR  SP +N DGGR+PTPR    R     SRS SP+   +D
Sbjct: 241 SPSPRGESPVRNGDGGRTPTPRSVSPRGQPADSRSPSPQNSDVD 278

[Close]

BLAST of Sed0010987 vs. TAIR 10
Match: AT5G64200.1 (ortholog of human splicing factor SC35 )

HSP 1 Score: 247.7 bits (631), Expect = 1.8e-65
Identity = 174/327 (53.21%), Postives = 211/327 (64.53%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+D+YSLLVLNITFRTT DDLYPLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRW---- 120
           FVRYKY+DEA KAV++L G V+DGR+I+V+FAKYGP AEKI KGR+ E  PKS+R     
Sbjct: 61  FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS 120

Query: 121 -------------------SRSRSPQRRHRDDYRDRDYRR--RSKSVDRRDRDRRGRERD 180
                               RSRSP+RR RDDYR++DYR+  RS+S DRR+R    ++RD
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEE-KDRD 180

Query: 181 YRRQSRSISPKRPGPDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNPSLRRS 240
           +RR++RS   +   PD  K R RGRY++E +S SRS S   A R  RS SP+K       
Sbjct: 181 HRRRTRS---RSASPD-EKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQKT------ 240

Query: 241 LSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYED 294
               SP+ R VSP K S+  RSP+PR           RS+SP+ P+L   K         
Sbjct: 241 ----SPA-REVSPDKRSN-ERSPSPR-----------RSLSPRSPAL--QKASPSKEMSP 297

[Close]

BLAST of Sed0010987 vs. TAIR 10
Match: AT5G64200.2 (ortholog of human splicing factor SC35 )

HSP 1 Score: 247.7 bits (631), Expect = 1.8e-65
Identity = 174/327 (53.21%), Postives = 211/327 (64.53%), Query Frame = 0


Query: 1   MSHFGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+D+YSLLVLNITFRTT DDLYPLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRW---- 120
           FVRYKY+DEA KAV++L G V+DGR+I+V+FAKYGP AEKI KGR+ E  PKS+R     
Sbjct: 61  FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS 120

Query: 121 -------------------SRSRSPQRRHRDDYRDRDYRR--RSKSVDRRDRDRRGRERD 180
                               RSRSP+RR RDDYR++DYR+  RS+S DRR+R    ++RD
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEE-KDRD 180

Query: 181 YRRQSRSISPKRPGPDYSKGRGRGRYEDERKSRSRSRSVDSASRGRRSPSPRKNPSLRRS 240
           +RR++RS   +   PD  K R RGRY++E +S SRS S   A R  RS SP+K       
Sbjct: 181 HRRRTRS---RSASPD-EKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQKT------ 240

Query: 241 LSPCSPSPRSVSPQKNSDGGRSPTPRHGRERDYRKRSRSISPKRPSLDYSKGRGRGRYED 294
               SP+ R VSP K S+  RSP+PR           RS+SP+ P+L   K         
Sbjct: 241 ----SPA-REVSPDKRSN-ERSPSPR-----------RSLSPRSPAL--QKASPSKEMSP 297

[Close]

BLAST of Sed0010987 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 )

HSP 1 Score: 70.5 bits (171), Expect = 3.9e-12
Identity = 89/271 (32.84%), Postives = 131/271 (48.34%), Query Frame = 0


Query: 17  SLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFAFVRYKYEDEAQKAVDK 76
           SLLV N+      +DL   F ++G V D+++PRD  TGD RGF FV++    +A  A   
Sbjct: 37  SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96

Query: 77  LHGTVIDGRDISVRFAKYGPK------AEKIHKGRISEALPKSKR-WSRSRS-PQRRHRD 136
           + G ++ GR+++V FA+   K      A +   GR  +      R +SRSRS P RR R 
Sbjct: 97  MDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRS 156

Query: 137 DYRDRDYRRRSKSVDRRDRDRRGRERDYRRQSRSISPKRPGPDYSKGRGRGRYEDERKSR 196
             R  DY        RR   R    R+ R   R    + P  D S+GR       + +S 
Sbjct: 157 RSRSGDY---YSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 216

Query: 197 SRS--RSVDSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVSPQKNSDGGRSPTPRHGRER 256
           S S  RS+  + R  RSPSP++N              RSVSP+++     S +PR  R R
Sbjct: 217 SPSPRRSISRSPRRSRSPSPKRN--------------RSVSPRRSI----SRSPR--RSR 276

Query: 257 DYRKRSRSISPKRPSLDYSKGRGRGRYEDER 278
             R+  RS +P+ P+   S+    G+Y+++R
Sbjct: 277 SPRRSRRSYTPE-PARSRSQSPHGGQYDEDR 283

[Close]

BLAST of Sed0010987 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-11
Identity = 89/247 (36.03%), Postives = 122/247 (49.39%), Query Frame = 0


Query: 4   FGRSGPPDIADSYSLLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFAFVR 63
           FG S   D+    SLLV N+      +DL   F ++G V D+++PRD  TGD RGF F++
Sbjct: 27  FGGSRDSDLPT--SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQ 86

Query: 64  YKYEDEAQKAVDKLHGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRW-SRSRSP 123
           +    +A +A  ++ G ++ GR+++V FA+   K  K  + R  +   +S R+  R RSP
Sbjct: 87  FMDPADAAEAKHQMDGYLLLGRELTVVFAEENRK--KPTEMRTRDRGGRSNRFQDRRRSP 146

Query: 124 QRRHRDDYRDRDYRRRSKSVDRRDRDRRGRERDYRRQSRSISPKRPGPDYSKGRGRGRYE 183
            R  R     R  R RS+S        +      R QSRS+SP+     Y K R   R  
Sbjct: 147 PRYSRSPPPRRGRRSRSRSRGYNSPPAK------RHQSRSVSPQ--DRRYEKERSYSRSP 206

Query: 184 DERKSRSRSRS---VDSASRG-RRSPSPRKN----PSLRRSLSPCSPSPRSVS--PQKNS 240
               SR RS S   V S SR  RRS SPRKN    P   RS SP     RS +  P+   
Sbjct: 207 PHNGSRVRSGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSRSPTPVPRGAQ 261

[Close]

BLAST of Sed0010987 vs. TAIR 10
Match: AT5G18810.1 (SC35-like splicing factor 28 )

HSP 1 Score: 67.4 bits (163), Expect = 3.3e-11
Identity = 68/214 (31.78%), Postives = 100/214 (46.73%), Query Frame = 0


Query: 18  LLVLNITFRTTGDDLYPLFSKYGKVVDVFIPRDRRTGDSRGFAFVRYKYEDEAQKAVDKL 77
           LL+ N+      +DL   F ++G + D+++PR+  TG+ RGF FV+Y+Y ++A +A+ ++
Sbjct: 49  LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108

Query: 78  HGTVIDGRDISVRFAKYGPKAEKIHKGRISEALPKSKRWSRSRSPQRRHRDDYRDRDYRR 137
           +  VI GR+I++ FA+   K             P+  R +   S         R  DY+R
Sbjct: 109 NHKVIGGREIAIVFAEENRKT------------PQEMRTTNGTSG--------RHGDYKR 168

Query: 138 RSKSVDRRDRDRRGRERDYRRQSRSISPKRPGPDYSKGRGRGRYEDERKSRSRSRSV--- 197
            S          R   R YR  SRS SP R    +SK R    Y   R+SRS SRS    
Sbjct: 169 TS---------HRSPRRRYRSHSRSRSPPRRESRHSKVREDDLYSPRRRSRSISRSPLPR 228

Query: 198 -DSASRGRRSPSPRKNPSLRRSLSPCSPSPRSVS 228
            +   + R   SPR+   L    S C    RS S
Sbjct: 229 NEREYKSRNCRSPREERVLTPIRSRCLSRSRSRS 233

The following BLAST results are available for this feature:

BLAST of Sed0010987 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529917.1	2.1e-95	52.52	serine/arginine-rich splicing factor SC35-like [Cucurbita pepo subsp. pepo]	[more]
XP_004136874.2	9.5e-93	72.30	serine/arginine-rich splicing factor SC35 [Cucumis sativus] >KGN43716.1 hypothet...	[more]
XP_008455209.1	1.2e-92	72.66	PREDICTED: serine/arginine-rich splicing factor SC35 [Cucumis melo]	[more]
XP_038888048.1	2.1e-92	70.88	serine/arginine-rich splicing factor SC35 [Benincasa hispida]	[more]
XP_022927926.1	2.3e-91	50.88	serine/arginine-rich splicing factor SC35-like [Cucurbita moschata] >KAG6588771....	[more]

BLAST of Sed0010987 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMG4	2.5e-64	53.21	Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana OX=3702 GN=SC3...	[more]
P30352	2.0e-24	40.86	Serine/arginine-rich splicing factor 2 OS=Gallus gallus OX=9031 GN=SRSF2 PE=2 SV...	[more]
Q06A98	5.7e-24	40.86	Serine/arginine-rich splicing factor 2 OS=Sus scrofa OX=9823 GN=SRSF2 PE=2 SV=1	[more]
Q3MHR5	9.8e-24	40.86	Serine/arginine-rich splicing factor 2 OS=Bos taurus OX=9913 GN=SRSF2 PE=2 SV=3	[more]
Q01130	9.8e-24	40.86	Serine/arginine-rich splicing factor 2 OS=Homo sapiens OX=9606 GN=SRSF2 PE=1 SV=...	[more]

BLAST of Sed0010987 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7C0	4.6e-93	72.30	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062820 PE=4 SV...	[more]
A0A1S3C0I4	6.0e-93	72.66	serine/arginine-rich splicing factor SC35 OS=Cucumis melo OX=3656 GN=LOC10349542...	[more]
A0A6J1EIV3	1.1e-91	50.88	serine/arginine-rich splicing factor SC35-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JE82	1.5e-91	50.77	serine/arginine-rich splicing factor SC35-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1CKN2	4.8e-90	70.42	serine/arginine-rich splicing factor SC35 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Sed0010987 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64200.1	1.8e-65	53.21	ortholog of human splicing factor SC35	[more]
AT5G64200.2	1.8e-65	53.21	ortholog of human splicing factor SC35	[more]
AT1G55310.1	3.9e-12	32.84	SC35-like splicing factor 33	[more]
AT3G13570.1	1.1e-11	36.03	SC35-like splicing factor 30A	[more]
AT5G18810.1	3.3e-11	31.78	SC35-like splicing factor 28	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 17..90 e-value: 8.2E-26 score: 101.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 19..87 e-value: 7.5E-21 score: 73.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 16..94 score: 19.331329
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 17..90 e-value: 0.0048 score: 26.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..105 e-value: 1.1E-27 score: 99.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..164
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 242..356 coord: 1..240
None	No IPR available	PANTHER	PTHR23147:SF156	SERINE/ARGININE-RICH SPLICING FACTOR SC35	coord: 242..356
None	No IPR available	PANTHER	PTHR23147:SF156	SERINE/ARGININE-RICH SPLICING FACTOR SC35	coord: 1..240
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010987.1	Sed0010987.1	mRNA
Sed0010987.2	Sed0010987.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005622	intracellular anatomical structure
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding