Sed0010823 (gene) Chayote v1

Overview


Name	Sed0010823
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ycf3-interacting protein 1, chloroplastic
Location	LG14: 24877397 .. 24880519 (-)
RNA-Seq Expression	Sed0010823
Synteny	Sed0010823

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTCGTGGGTGTTCGACTCTGGGCTTTTCCTTCTTCTTGTTCGTACCCTGTGTGTATTTTGGAAGGCAATTACAAAGCTCCTCGTTTCCGGCGCCATTCTGTGGTAGGAGTTGCAAGGCGGCGCAGTGGAGTGGCTGTGGGCTGCGTTGGCAAAGAAGACACCCGGTTGCAAGATCCACAGGCAGACGCCCAGGACCTGGAATACGTTCGCCAGATCCGAAGGGTGTTGGACCTTCTCAAGAAGAACAGAGACATGCTCTTCAACGAGGTCACCCACTCCCCACTCTCCTTCTCTTTCCCTCGCATTCCTCTCTCCATCTTCATATTCTTCAATCTAGCAGGTTAAACTTACCGTAATGATTGAAGACCCCCGGGAAGTTGAGCGCCTCAGATTACTTGGAATTGACTACGACGACGCCCCAACAAGAGATGATCTAGCGGCCGCTCTTGAGCAGGTCACACCTTTTACCTCTCATGTAACTAACGGAAACATGCCAAAAAGGACACGCGGTAGGGCTGCAAGTACATTCTATTCACTTTCATTTCCTATCCTACTAGGTCAATGAAGGAAAGATACCAAAAAATCGAGTAGCTCTCCAAATGCTTGCGGAAGAGATGATCAATTGGCCTAATTTGGAGGTATTATTTCTTACTTTTCCTAAAACCCTAAAGGAAATTTCATTGATGAATGAATCATAAGTGAATTCTCCGAGTGCCTATGATGAATACAACAAAAGAACTCCATGAGGAGAGATGCGAGAGGAAAATAAGCCAACAAATAGTCAAAATTAGGGTGATGGTTAACGAAAGAATTGATAAGAGAACATTTGTGATCTAAAGGGATGACTAAAATAATGCATGATAATGAGATCATGAACCAACTTCTCTTACATTTCAAAACTTATAATCAATGAACTAATAATATGATTGAGTTATTTTATAAAACATTGAAGACCAAAAAATTTATAGGATTAAATTATTTTATATATATATAGGAAATTTATTGTTAGGTAGATGTCTACCATAGATTAAACTCAATCCCTTTTAGTTCTACAAGACTTGTTTGACCATTAGACCAATCATACGAAAATATGCTACGTTGGACTTCAAATACTAACATAACATTGCTATCCTTATGAGAGAAAAACATAAAGTCAGACTGTTTTAGCAACTAAATGTGATGGCGCTAAACTGTCTTTATACTAAAATACAGAGGCTGATGAATCCTCGATCACACCTATTCTTGTTTTGGCTCTAAATACCGTAGTTTTGGTGTTGTATAGCAATTATCAGTCATCCTTTGGTGTTTAGTGATACCCGCTACATGTGGGTATCTAGCCATATGAAGAGCGAGAACCCAAATATGATTGATGGGGATCGTGGCTAATGGTTAGAGGAGATGTAGATGGACAATAGTAGACAATTACAAAAAATATCTATTGATTGCGAGTAAAATTTCTATCGCAAGGGTTTTGCCCCATGTCATTTCAAACTATTCCAGTTATCACCAAATCCTCATCATATCTCGGGGCGGCGTCTTCTCAACATAAATATCTGAGGAACAGCTTTTGTTTATAAGTACTTCTTCTTGATGATAATTTAACTTCATAAGCTCAAAATCATTCAATTGGTTTTCCGTCTTTTATGCATGAGTGTGCATGCGTGCTTAGCAAAGAAAATATGAGCTCTCCGGTGGATTACGATTGAATTAAGTATTGTGCAATGTAATATAGTAAACATCATGGTTGGCATAGGGGTAAGAGAATCTTAGGGAATTAAGAGGTTATGTGTTAAATTGATGGTAACCACCTACTTGGGAATTAATTTCCCCATGTTTCAAAAGGCTATTGAGGCTTACGCCTTGAGACTCGCCTCAAGGCAAGGCTCTAACTGTTAGCCTCGTGTCTTACGCCTTTCTTGGATCATAAGAGGCTTACGCCTCGATGATAACGCACCAAGGTTTAAAATTCCTACGCCTCGTAGAATAACTAGAAGAATAGTATTAATATTTTCTATTCTTATAATATAAGAGTTTGAACCATAACAATATAGATTTTCTCTTATGGATTTTTTTGTTAGAAAGACACAATTGTTTAAGAATTGCCAATTTTGATAATTTGCTGGCTTATTTTCCTCTAGCATCTCTTTTTGGAGTTCTTTGTTGTATTCACTATTGGTGCTAGAGAATTCACTTATATTTCATTCATCAATGAAATTGTTTATTCCAAAAAAACTCAATCCTATTAGTGCTGGTATTATGTTTTTATGTATTTTTACGTAAATATTATGCTTTACCATACATTTTTACACAAATCTAGAATTTTTATAATATTTTTAATTAAAATAGAGGCTTACGCCTCATACCGCCTCGAGGCTTATGCCTTGCCTCTTCAAGAGAAAAAGCCTCGAGGCCGCCTTTAGCCTTTTAAAACATTGTTAATTTCCTACATATGGAAATAATTTTAGTTGTGTGTTTTTTTTCTTCTTTTGTTCATGTTATCATCGGTAAGGGTCGGTCAGCATCATTTCCCCTCCATTTTGATTTTTATTTTTACAGCTCTCTCTTAACCTGTTTCTTTTGCCGATTTAGCTTCTGTGATTTTGTCAAATTGTGAGTTTCTATCAGATGTGATGCATACGGTTTAAACTCGTGTAGGTTGAGGTTCCCAAGACGAAACGCAGTAAATCTTTGTATGCAAAAGCCACAGACACTGGTGTGGATCCTCGAGAGGCTGCGAAGAGACTAAACATTGATTGGGACACTGCAGCTGAGATCGAAGATGGCGACTTGAGTGATGACTCGGAAGTGCCTGCTGTTGTGGTTTGTTTTCTTGGCCCATCATTAAAGACGCTGCTTTTAGTCCAACTTATTTATTGTGATGTTGAGATATTGTGGATTTGTCACCTCAATGCTGTCAGGACAGTGCTGGAATTTTTAAAGTAGATAACGAGTTGTTAAGTGTAATGAGTCTTAATATTGCATGATATTACAATTGCTGATGAGGAAATTCAAATTGATTTGATGCAGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCCGTGATAATTGGCATCTCAGTAGTTCTAATCCTTTTCTACAATTCCCTTCAATAA

mRNA sequence

ATGGAAGTCGTGGGTGTTCGACTCTGGGCTTTTCCTTCTTCTTGTTCGTACCCTGTGTGTATTTTGGAAGGCAATTACAAAGCTCCTCGTTTCCGGCGCCATTCTGTGGTAGGAGTTGCAAGGCGGCGCAGTGGAGTGGCTGTGGGCTGCGTTGGCAAAGAAGACACCCGGTTGCAAGATCCACAGGCAGACGCCCAGGACCTGGAATACGTTCGCCAGATCCGAAGGGTGTTGGACCTTCTCAAGAAGAACAGAGACATGCTCTTCAACGAGGTTAAACTTACCGTAATGATTGAAGACCCCCGGGAAGTTGAGCGCCTCAGATTACTTGGAATTGACTACGACGACGCCCCAACAAGAGATGATCTAGCGGCCGCTCTTGAGCAGGTCAATGAAGGAAAGATACCAAAAAATCGAGTAGCTCTCCAAATGCTTGCGGAAGAGATGATCAATTGGCCTAATTTGGAGGTTGAGGTTCCCAAGACGAAACGCAGTAAATCTTTGTATGCAAAAGCCACAGACACTGGTGTGGATCCTCGAGAGGCTGCGAAGAGACTAAACATTGATTGGGACACTGCAGCTGAGATCGAAGATGGCGACTTGAGTGATGACTCGGAAGTGCCTGCTGTTGTGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCCGTGATAATTGGCATCTCAGTAGTTCTAATCCTTTTCTACAATTCCCTTCAATAA

Coding sequence (CDS)

ATGGAAGTCGTGGGTGTTCGACTCTGGGCTTTTCCTTCTTCTTGTTCGTACCCTGTGTGTATTTTGGAAGGCAATTACAAAGCTCCTCGTTTCCGGCGCCATTCTGTGGTAGGAGTTGCAAGGCGGCGCAGTGGAGTGGCTGTGGGCTGCGTTGGCAAAGAAGACACCCGGTTGCAAGATCCACAGGCAGACGCCCAGGACCTGGAATACGTTCGCCAGATCCGAAGGGTGTTGGACCTTCTCAAGAAGAACAGAGACATGCTCTTCAACGAGGTTAAACTTACCGTAATGATTGAAGACCCCCGGGAAGTTGAGCGCCTCAGATTACTTGGAATTGACTACGACGACGCCCCAACAAGAGATGATCTAGCGGCCGCTCTTGAGCAGGTCAATGAAGGAAAGATACCAAAAAATCGAGTAGCTCTCCAAATGCTTGCGGAAGAGATGATCAATTGGCCTAATTTGGAGGTTGAGGTTCCCAAGACGAAACGCAGTAAATCTTTGTATGCAAAAGCCACAGACACTGGTGTGGATCCTCGAGAGGCTGCGAAGAGACTAAACATTGATTGGGACACTGCAGCTGAGATCGAAGATGGCGACTTGAGTGATGACTCGGAAGTGCCTGCTGTTGTGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCCGTGATAATTGGCATCTCAGTAGTTCTAATCCTTTTCTACAATTCCCTTCAATAA

Protein sequence

MEVVGVRLWAFPSSCSYPVCILEGNYKAPRFRRHSVVGVARRRSGVAVGCVGKEDTRLQDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVERLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRSKSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVIIGISVVLILFYNSLQ

Homology

[Close]

BLAST of Sed0010823 vs. NCBI nr
Match: XP_038877519.1 (ycf3-interacting protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 334.7 bits (857), Expect = 6.5e-88
Identity = 189/255 (74.12%), Postives = 204/255 (80.00%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKA-PRFRRHSVVGVARR--------RSGVAVGCV 60
           M+V+ ++L  FP S S     +E NYKA PRFR   +   A R        R+  ++ CV
Sbjct: 1   MQVMALQLRHFPLSPS--SSSIEHNYKAFPRFRHLPLPSYASRHHLPVPNSRNRQSLACV 60

Query: 61  GKEDTRL------QDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVE 120
           GKEDT+L      QD Q DAQ LEYVRQI+RVL+LLKKNRDMLFNEVKLTVMIEDPR+VE
Sbjct: 61  GKEDTQLRQSSSTQDEQPDAQALEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPRDVE 120

Query: 121 RLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRS 180
           R RLLGID DDAPTRDDLAA LE+VNEGK PKNRVALQMLAEEM NWPNLE E PK KR 
Sbjct: 121 RRRLLGIDDDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTNWPNLEAEAPKKKRG 180

Query: 181 KSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVI 240
           KSLYAKATDTGV+PREAAKRLNIDWDTAAEIED DLSDD EVPA VGYGALYIVTAFPVI
Sbjct: 181 KSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAVGYGALYIVTAFPVI 240

[Close]

BLAST of Sed0010823 vs. NCBI nr
Match: XP_004134512.1 (ycf3-interacting protein 1, chloroplastic isoform X1 [Cucumis sativus] >KGN49548.1 hypothetical protein Csa_003068 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 1.9e-87
Identity = 188/257 (73.15%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKAPR-----------FRRHSVVGVARRRSGVAVG 60
           M V+ ++L  FP S S P   +E NY   R            R H  V  +R R  +A  
Sbjct: 1   MAVMALQLRHFPLSTS-PSSSIEHNYDISRRFRYLPLPSHGTRPHLPVPSSRNRRSLA-- 60

Query: 61  CVGKEDTRLQDP------QADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPRE 120
           CVGKEDT+L+ P      Q +AQDLEY+RQI+RVL+LLKKNRDMLFNEVKLTVMIEDPRE
Sbjct: 61  CVGKEDTQLRQPSSTTDEQPEAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPRE 120

Query: 121 VERLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTK 180
           VER RLLGID DDAPTRDDLAA LE+VNEGK PKNRVALQMLAEEM NWPNLE E PK K
Sbjct: 121 VERRRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTNWPNLEAEAPKKK 180

Query: 181 RSKSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFP 240
           RSKSLYAKATDTGV+PREAAKRLNIDWDTAAEIED DLSDD EVPA VGYGALYIVTAFP
Sbjct: 181 RSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAVGYGALYIVTAFP 240

[Close]

BLAST of Sed0010823 vs. NCBI nr
Match: XP_022977224.1 (ycf3-interacting protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 328.9 bits (842), Expect = 3.5e-86
Identity = 184/255 (72.16%), Postives = 201/255 (78.82%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKAPRFRRH---------SVVGVARRRSGVAVGCV 60
           MEV+ ++L  FP S S     ++ NYKA R  RH           + V+  R+   VGCV
Sbjct: 1   MEVMALQLRHFPLSPS--PSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCV 60

Query: 61  GKEDTRL------QDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVE 120
           GKEDT+L      +  Q DAQDLEY+RQI+RVL+LLKKNRDMLFNEVKLTVMIEDPREVE
Sbjct: 61  GKEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVE 120

Query: 121 RLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRS 180
           R RLLGID DDAPTRDDLA  LE+VNEGK PKNR ALQMLAEEM NWPNLEVE PK KRS
Sbjct: 121 RRRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRS 180

Query: 181 KSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVI 240
           KSLYA  TDTGV+PREAAKRLNIDWDTAAE+ED DLS+D EVPA VGYGALYIVTAFPVI
Sbjct: 181 KSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVI 240

[Close]

BLAST of Sed0010823 vs. NCBI nr
Match: XP_023544732.1 (ycf3-interacting protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 3.5e-86
Identity = 183/255 (71.76%), Postives = 202/255 (79.22%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKAPRFRRH---------SVVGVARRRSGVAVGCV 60
           MEV+ ++L  FP S S     ++ NYKA R  RH           + V+  R+   VGCV
Sbjct: 1   MEVMALQLHHFPLSPS--PSSIKHNYKASRCFRHLPHPNYASRHHLPVSSSRNRRVVGCV 60

Query: 61  GKEDTRL------QDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVE 120
           GKE+T+L      +D Q DAQDLEY+RQI+RVL+LLKKNRDMLFNEVKLTVMIEDPREVE
Sbjct: 61  GKENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVE 120

Query: 121 RLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRS 180
           R RLLGID +DAPTRDDLA  LE+VNEGK PKNR ALQMLAEEM NWPNLEVE PK KRS
Sbjct: 121 RRRLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRS 180

Query: 181 KSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVI 240
           KSLYA  TDTGV+PREAAKRLNIDWDTAAE+ED DLS+D EVPA VGYGALYIVTAFPVI
Sbjct: 181 KSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVI 240

[Close]

BLAST of Sed0010823 vs. NCBI nr
Match: XP_022925592.1 (ycf3-interacting protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 328.6 bits (841), Expect = 4.6e-86
Identity = 183/255 (71.76%), Postives = 202/255 (79.22%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKAPRFRRH---------SVVGVARRRSGVAVGCV 60
           MEV+ ++L  FP S S     ++ NYKA R  RH           + V+  R+   VGCV
Sbjct: 1   MEVMALQLRHFPLSPS--PSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRRVVGCV 60

Query: 61  GKEDTRL------QDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVE 120
           GKE+T+L      +D Q DAQDLEY+RQI+RVL+LLKKNRDMLFNEVKLTVMIEDPREVE
Sbjct: 61  GKENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVE 120

Query: 121 RLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRS 180
           R RLLGID +DAPTRDDLA  LE+VNEGK PKNR ALQMLAEEM NWPNLEVE PK KRS
Sbjct: 121 RRRLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRS 180

Query: 181 KSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVI 240
           KSLYA  TDTGV+PREAAKRLNIDWDTAAE+ED DLS+D EVPA VGYGALYIVTAFPVI
Sbjct: 181 KSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVI 240

[Close]

BLAST of Sed0010823 vs. ExPASy Swiss-Prot
Match: E5KCJ8 (Ycf3-interacting protein 1, chloroplastic OS=Nicotiana tabacum OX=4097 PE=1 SV=2)

HSP 1 Score: 259.2 bits (661), Expect = 4.5e-68
Identity = 136/195 (69.74%), Postives = 162/195 (83.08%), Query Frame = 0


Query: 47  AVGCVGKEDTRLQDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVER 106
           A   V +E+    D   D Q LEYV QI+RVL+LLK+NRDMLF EVKLT+MIEDPR+VER
Sbjct: 69  ATYAVTEEEEDNDDDDPDPQSLEYVSQIKRVLELLKRNRDMLFGEVKLTIMIEDPRDVER 128

Query: 107 LRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPK-TKRS 166
            RLLGID ++APTRDDLAAALE++NEGK+PK+  ALQMLAEEM +WPNLEVE  K  K  
Sbjct: 129 RRLLGIDDENAPTRDDLAAALEEINEGKVPKDFAALQMLAEEMNSWPNLEVEATKQNKPG 188

Query: 167 KSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVI 226
           +SLYAKATDTG+DP+EAAKRL IDWD+AAEI++   SD+ +VP  +GYGALY+V+AFP+I
Sbjct: 189 RSLYAKATDTGIDPKEAAKRLKIDWDSAAEIDESAESDEPDVPPALGYGALYLVSAFPII 248

Query: 227 IGISVVLILFYNSLQ 241
           IGISVVLILFYNSLQ
Sbjct: 249 IGISVVLILFYNSLQ 263

[Close]

BLAST of Sed0010823 vs. ExPASy Swiss-Prot
Match: Q9LU01 (Ycf3-interacting protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=Y3IP1 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.3e-64
Identity = 125/188 (66.49%), Postives = 157/188 (83.51%), Query Frame = 0


Query: 54  EDTRLQDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVERLRLLGID 113
           E+  + +   D +DL+YV +I+RV++LL++NRDM+F+EVKLT+MIEDPRE+ER RLLGI+
Sbjct: 93  EEDEIDEGDVDPEDLKYVNEIKRVIELLRRNRDMIFSEVKLTIMIEDPRELERRRLLGIE 152

Query: 114 YDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRSKSLYAKAT 173
             D P+RDDLA ALEQVN+GKIPK+R  L+ML EEMI WPNLEVEV K +R KS+YAK+T
Sbjct: 153 DADTPSRDDLAEALEQVNDGKIPKDRATLRMLHEEMIRWPNLEVEVSKKQRGKSMYAKST 212

Query: 174 DTGVDPREAAKRLNIDWDTAAEIEDGDLSDD-SEVPAVVGYGALYIVTAFPVIIGISVVL 233
           DTG+DP+EAAKRLN++WD+AA IE+ D+ D+   V  V GYGALY V+A PVIIGISVVL
Sbjct: 213 DTGIDPKEAAKRLNVEWDSAAAIEEVDVDDEQGVVTKVAGYGALYFVSALPVIIGISVVL 272

Query: 234 ILFYNSLQ 241
           ILFYNSLQ
Sbjct: 273 ILFYNSLQ 280

[Close]

BLAST of Sed0010823 vs. ExPASy Swiss-Prot
Match: B8AAV3 (Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=CEST PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.8e-64
Identity = 128/195 (65.64%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 49  GCVGKEDTRLQDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVERLR 108
           G  G   +  + P+A  +DLE +RQ++RVL+LL+KNRDM F EVKLT+MIEDPR++ER R
Sbjct: 98  GAAGDIASSAEQPEASPEDLEDIRQVKRVLELLQKNRDMTFGEVKLTIMIEDPRDIERKR 157

Query: 109 LLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVP--KTKRSK 168
           LLGI+  D  TRDDLA AL +VNEG+IP+NRVALQ+LA+EM  WP+LE+E P  K+K  K
Sbjct: 158 LLGIEDPDEITRDDLADALVEVNEGRIPENRVALQLLAKEMTEWPDLEMEAPKKKSKPGK 217

Query: 169 SLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDD-SEVPAVVGYGALYIVTAFPVI 228
           S+YAKATDTG+DP  AAKRLNIDWD+AA+++D +  DD +EVP+ VGY ALY++TAFPVI
Sbjct: 218 SVYAKATDTGIDPETAAKRLNIDWDSAADLDDEEEEDDETEVPSAVGYSALYLLTAFPVI 277

Query: 229 IGISVVLILFYNSLQ 241
           IGISVVLILFYNSLQ
Sbjct: 278 IGISVVLILFYNSLQ 292

[Close]

BLAST of Sed0010823 vs. ExPASy Swiss-Prot
Match: Q5VQK9 (Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CEST PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.8e-64
Identity = 128/195 (65.64%), Postives = 159/195 (81.54%), Query Frame = 0


Query: 49  GCVGKEDTRLQDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVERLR 108
           G  G      + P+A  +DLE +RQ++RVL+LL+KNRDM F EVKLT+MIEDPR++ER R
Sbjct: 98  GAAGDIAASAEQPEASPEDLEDIRQVKRVLELLQKNRDMTFGEVKLTIMIEDPRDIERKR 157

Query: 109 LLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVP--KTKRSK 168
           LLGI+  D  TRDDLA AL +VNEG+IP+NRVALQ+LA+EM  WP+LE+E P  K+K  K
Sbjct: 158 LLGIEDPDEITRDDLADALVEVNEGRIPENRVALQLLAKEMTEWPDLEMEAPKKKSKPGK 217

Query: 169 SLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDD-SEVPAVVGYGALYIVTAFPVI 228
           S+YAKATDTG+DP  AAKRLNIDWD+AA+++D +  DD +EVP+ VGY ALY++TAFPVI
Sbjct: 218 SVYAKATDTGIDPETAAKRLNIDWDSAADLDDEEEEDDETEVPSAVGYSALYLLTAFPVI 277

Query: 229 IGISVVLILFYNSLQ 241
           IGISVVLILFYNSLQ
Sbjct: 278 IGISVVLILFYNSLQ 292

[Close]

BLAST of Sed0010823 vs. ExPASy TrEMBL
Match: A0A0A0KJ48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538770 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 9.1e-88
Identity = 188/257 (73.15%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKAPR-----------FRRHSVVGVARRRSGVAVG 60
           M V+ ++L  FP S S P   +E NY   R            R H  V  +R R  +A  
Sbjct: 1   MAVMALQLRHFPLSTS-PSSSIEHNYDISRRFRYLPLPSHGTRPHLPVPSSRNRRSLA-- 60

Query: 61  CVGKEDTRLQDP------QADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPRE 120
           CVGKEDT+L+ P      Q +AQDLEY+RQI+RVL+LLKKNRDMLFNEVKLTVMIEDPRE
Sbjct: 61  CVGKEDTQLRQPSSTTDEQPEAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPRE 120

Query: 121 VERLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTK 180
           VER RLLGID DDAPTRDDLAA LE+VNEGK PKNRVALQMLAEEM NWPNLE E PK K
Sbjct: 121 VERRRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTNWPNLEAEAPKKK 180

Query: 181 RSKSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFP 240
           RSKSLYAKATDTGV+PREAAKRLNIDWDTAAEIED DLSDD EVPA VGYGALYIVTAFP
Sbjct: 181 RSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAVGYGALYIVTAFP 240

[Close]

BLAST of Sed0010823 vs. ExPASy TrEMBL
Match: A0A6J1IQU0 (ycf3-interacting protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477600 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 184/255 (72.16%), Postives = 201/255 (78.82%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKAPRFRRH---------SVVGVARRRSGVAVGCV 60
           MEV+ ++L  FP S S     ++ NYKA R  RH           + V+  R+   VGCV
Sbjct: 1   MEVMALQLRHFPLSPS--PSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCV 60

Query: 61  GKEDTRL------QDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVE 120
           GKEDT+L      +  Q DAQDLEY+RQI+RVL+LLKKNRDMLFNEVKLTVMIEDPREVE
Sbjct: 61  GKEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVE 120

Query: 121 RLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRS 180
           R RLLGID DDAPTRDDLA  LE+VNEGK PKNR ALQMLAEEM NWPNLEVE PK KRS
Sbjct: 121 RRRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRS 180

Query: 181 KSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVI 240
           KSLYA  TDTGV+PREAAKRLNIDWDTAAE+ED DLS+D EVPA VGYGALYIVTAFPVI
Sbjct: 181 KSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVI 240

[Close]

BLAST of Sed0010823 vs. ExPASy TrEMBL
Match: A0A6J1EC41 (ycf3-interacting protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432979 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.2e-86
Identity = 183/255 (71.76%), Postives = 202/255 (79.22%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKAPRFRRH---------SVVGVARRRSGVAVGCV 60
           MEV+ ++L  FP S S     ++ NYKA R  RH           + V+  R+   VGCV
Sbjct: 1   MEVMALQLRHFPLSPS--PSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRRVVGCV 60

Query: 61  GKEDTRL------QDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVE 120
           GKE+T+L      +D Q DAQDLEY+RQI+RVL+LLKKNRDMLFNEVKLTVMIEDPREVE
Sbjct: 61  GKENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVE 120

Query: 121 RLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRS 180
           R RLLGID +DAPTRDDLA  LE+VNEGK PKNR ALQMLAEEM NWPNLEVE PK KRS
Sbjct: 121 RRRLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRS 180

Query: 181 KSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVI 240
           KSLYA  TDTGV+PREAAKRLNIDWDTAAE+ED DLS+D EVPA VGYGALYIVTAFPVI
Sbjct: 181 KSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVI 240

[Close]

BLAST of Sed0010823 vs. ExPASy TrEMBL
Match: A0A6J1CZ78 (ycf3-interacting protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015836 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.9e-86
Identity = 186/258 (72.09%), Postives = 204/258 (79.07%), Query Frame = 0


Query: 1   MEVVGVRLWAFP---SSCSYPVCILEGNYKAPRFRR--------HSVVGVARRRSGVAVG 60
           M+V+ ++L  FP   SS S     +E N KAPRFR         H  + +   R+   V 
Sbjct: 1   MQVMALQLRHFPLSSSSSSSSSSSIERNCKAPRFRHLPLPSYAPHQHLHLPSTRNPRIVA 60

Query: 61  CVGKEDTRLQ-----DPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREV 120
           CVGKEDT+L+     D   DAQDLEYVRQI+RVL+LLKKNRDMLFNEVKLTVMIEDPREV
Sbjct: 61  CVGKEDTQLRQSSSTDQHPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREV 120

Query: 121 ERLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVP--KT 180
           ER RLLGID DDAPTRDDLAA LE+VNEGK PKNRVAL+MLAEEMINWPNLEVE P  K 
Sbjct: 121 ERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPKNRVALRMLAEEMINWPNLEVEAPTKKE 180

Query: 181 KRSKSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAF 240
           +RSKSLYAKATDTGVDP  AAKRLNIDWD+AAEIED DLS+D EVPA VGYGALY+VTAF
Sbjct: 181 RRSKSLYAKATDTGVDPLVAAKRLNIDWDSAAEIEDADLSEDPEVPAAVGYGALYMVTAF 240

[Close]

BLAST of Sed0010823 vs. ExPASy TrEMBL
Match: A0A1S3AYB4 (ycf3-interacting protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484231 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.6e-84
Identity = 182/255 (71.37%), Postives = 199/255 (78.04%), Query Frame = 0


Query: 1   MEVVGVRLWAFPSSCSYPVCILEGNYKA-PRFRR--------HSVVGVARRRSGVAVGCV 60
           M V+ ++L  F  S S P   +E NY+   RFR+        H  + V   R+  ++ CV
Sbjct: 1   MAVMALQLRHFSLSPS-PSSSIEHNYEVYRRFRQLPLPSHGPHHRLLVPSSRNRRSLACV 60

Query: 61  GKEDTRLQ------DPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVE 120
           GKEDT+ +      D Q DAQ LEY+ QIRRVL+LLKKNRDMLFNEVKLTVMIEDPREVE
Sbjct: 61  GKEDTQFRQSSSTTDEQPDAQALEYIHQIRRVLELLKKNRDMLFNEVKLTVMIEDPREVE 120

Query: 121 RLRLLGIDYDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRS 180
           R RLLGID DDAPTRDDLAA LE+VNEGK PKNRVALQMLAEEM  WPNLE E PK +RS
Sbjct: 121 RRRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTKWPNLEAEAPKKRRS 180

Query: 181 KSLYAKATDTGVDPREAAKRLNIDWDTAAEIEDGDLSDDSEVPAVVGYGALYIVTAFPVI 240
           KSLYAKATDTGV+PREAAKRLNIDWDTAAEIED DL DD EVPA VGYGALYIVTAFPVI
Sbjct: 181 KSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLGDDPEVPAAVGYGALYIVTAFPVI 240

[Close]

BLAST of Sed0010823 vs. TAIR 10
Match: AT5G44650.1 (Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage. )

HSP 1 Score: 246.9 bits (629), Expect = 1.6e-65
Identity = 125/188 (66.49%), Postives = 157/188 (83.51%), Query Frame = 0


Query: 54  EDTRLQDPQADAQDLEYVRQIRRVLDLLKKNRDMLFNEVKLTVMIEDPREVERLRLLGID 113
           E+  + +   D +DL+YV +I+RV++LL++NRDM+F+EVKLT+MIEDPRE+ER RLLGI+
Sbjct: 93  EEDEIDEGDVDPEDLKYVNEIKRVIELLRRNRDMIFSEVKLTIMIEDPRELERRRLLGIE 152

Query: 114 YDDAPTRDDLAAALEQVNEGKIPKNRVALQMLAEEMINWPNLEVEVPKTKRSKSLYAKAT 173
             D P+RDDLA ALEQVN+GKIPK+R  L+ML EEMI WPNLEVEV K +R KS+YAK+T
Sbjct: 153 DADTPSRDDLAEALEQVNDGKIPKDRATLRMLHEEMIRWPNLEVEVSKKQRGKSMYAKST 212

Query: 174 DTGVDPREAAKRLNIDWDTAAEIEDGDLSDD-SEVPAVVGYGALYIVTAFPVIIGISVVL 233
           DTG+DP+EAAKRLN++WD+AA IE+ D+ D+   V  V GYGALY V+A PVIIGISVVL
Sbjct: 213 DTGIDPKEAAKRLNVEWDSAAAIEEVDVDDEQGVVTKVAGYGALYFVSALPVIIGISVVL 272

Query: 234 ILFYNSLQ 241
           ILFYNSLQ
Sbjct: 273 ILFYNSLQ 280

The following BLAST results are available for this feature:

BLAST of Sed0010823 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877519.1	6.5e-88	74.12	ycf3-interacting protein 1, chloroplastic [Benincasa hispida]	[more]
XP_004134512.1	1.9e-87	73.15	ycf3-interacting protein 1, chloroplastic isoform X1 [Cucumis sativus] >KGN49548...	[more]
XP_022977224.1	3.5e-86	72.16	ycf3-interacting protein 1, chloroplastic [Cucurbita maxima]	[more]
XP_023544732.1	3.5e-86	71.76	ycf3-interacting protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_022925592.1	4.6e-86	71.76	ycf3-interacting protein 1, chloroplastic [Cucurbita moschata]	[more]

BLAST of Sed0010823 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E5KCJ8	4.5e-68	69.74	Ycf3-interacting protein 1, chloroplastic OS=Nicotiana tabacum OX=4097 PE=1 SV=2	[more]
Q9LU01	2.3e-64	66.49	Ycf3-interacting protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=Y3I...	[more]
B8AAV3	6.8e-64	65.64	Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa su...	[more]
Q5VQK9	8.8e-64	65.64	Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa su...	[more]

BLAST of Sed0010823 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ48	9.1e-88	73.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538770 PE=4 SV=1	[more]
A0A6J1IQU0	1.7e-86	72.16	ycf3-interacting protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1EC41	2.2e-86	71.76	ycf3-interacting protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1CZ78	2.9e-86	72.09	ycf3-interacting protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3AYB4	3.6e-84	71.37	ycf3-interacting protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Sed0010823 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44650.1	1.6e-65	66.49	Encodes a chloroplast protein that induces tolerance to multiple environmental s...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040340	Chloroplast enhancing stress tolerance protein	PANTHER	PTHR33672	YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC	coord: 53..240
None	No IPR available	PANTHER	PTHR33672:SF3	YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC	coord: 53..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010823.1	Sed0010823.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
biological_process	GO:0080183	response to photooxidative stress
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane