Sed0010817 (gene) Chayote v1

Overview


Name	Sed0010817
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG10: 7292550 .. 7293511 (+)
RNA-Seq Expression	Sed0010817
Synteny	Sed0010817

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACAACCAACGAAGCTTCCTCTAAAACAGAGCTTTTCTCCAAAAAAACACCCATCTGAAAAATTCCTCAAATAAACTATTAGAAAAAAGTTCAAACAAAAAAGAAAAGGAATAAAGGAATCACAATGTCTTTCTTCTTCACCTCTTTAAACCACTAATTCATTAAACCCCAATTGAAACTCTTCTCCTAACAATGAAAACAGGGGAAGTTAAACCAATGTGTCTGAACAATCACCTCCAAACTTTGGTGAAATGTTTTCGATTCACAGAGGTTTTTTCAGGAATGGCATTTATATTTTGGATAATTAGCCGCCTCCCTTTGATTCTCAGAGTTTCTAGCGGTTACATTTCTCAAATCTCCACCATTTTCACAAGCCCTGTTTTCGGCTTCGTACTCTGCAACACAATCGTCGTTGCTCTGATTTCCAAGCCCCACCGATTCTCCGGCGACAATGTCGACACCGAAATCTTCAACGAGATTGTAAAAACCAGCCCCGTTGGGTCTCTGTCTTCGCCGGAAAGCGAGCCAATCGGGTGGCTCTGTTCTGACGCAGAGCCAGAGGAGATTGCATATGAAGATAAAGAGGTGATTTGTGAGGTGAGTTCGGCGGCGGCGATGGAGTTATCGGAAACGATGGACGATTTGGATTTGGGTTCGGAGAAATTGAAGCTAGAGTGGCTGGAATTTCGTGGAGAAAAGTTCCGGCGACCGGAGACGGAGGAGGAGGCGGCGATTTGGGGAGGTGGGGTTTCGCCGGAATGTGTACGGTACGGTGAGGAGCTGAGCAATATGGATTTTCAGCGAAGGATTGAAGAGTTTATTGCAAGGGAGTTGAGGTTTCGCCGGCGAGAATCCGGCGCCGTCGTTCTTCGGAGTGGAAGTTGCCTTTGATTGTGGTTAATTTCAGTTTTTCAATGAATAGAAAGTAAATAAATAAAATTGAAGTTTCTACTTTTATTTA

mRNA sequence

CCACAACCAACGAAGCTTCCTCTAAAACAGAGCTTTTCTCCAAAAAAACACCCATCTGAAAAATTCCTCAAATAAACTATTAGAAAAAAGTTCAAACAAAAAAGAAAAGGAATAAAGGAATCACAATGTCTTTCTTCTTCACCTCTTTAAACCACTAATTCATTAAACCCCAATTGAAACTCTTCTCCTAACAATGAAAACAGGGGAAGTTAAACCAATGTGTCTGAACAATCACCTCCAAACTTTGGTGAAATGTTTTCGATTCACAGAGGTTTTTTCAGGAATGGCATTTATATTTTGGATAATTAGCCGCCTCCCTTTGATTCTCAGAGTTTCTAGCGGTTACATTTCTCAAATCTCCACCATTTTCACAAGCCCTGTTTTCGGCTTCGTACTCTGCAACACAATCGTCGTTGCTCTGATTTCCAAGCCCCACCGATTCTCCGGCGACAATGTCGACACCGAAATCTTCAACGAGATTGTAAAAACCAGCCCCGTTGGGTCTCTGTCTTCGCCGGAAAGCGAGCCAATCGGGTGGCTCTGTTCTGACGCAGAGCCAGAGGAGATTGCATATGAAGATAAAGAGGTGATTTGTGAGGTGAGTTCGGCGGCGGCGATGGAGTTATCGGAAACGATGGACGATTTGGATTTGGGTTCGGAGAAATTGAAGCTAGAGTGGCTGGAATTTCGTGGAGAAAAGTTCCGGCGACCGGAGACGGAGGAGGAGGCGGCGATTTGGGGAGGTGGGGTTTCGCCGGAATGTGTACGGTACGGTGAGGAGCTGAGCAATATGGATTTTCAGCGAAGGATTGAAGAGTTTATTGCAAGGGAGTTGAGGTTTCGCCGGCGAGAATCCGGCGCCGTCGTTCTTCGGAGTGGAAGTTGCCTTTGATTGTGGTTAATTTCAGTTTTTCAATGAATAGAAAGTAAATAAATAAAATTGAAGTTTCTACTTTTATTTA

Coding sequence (CDS)

ATGAAAACAGGGGAAGTTAAACCAATGTGTCTGAACAATCACCTCCAAACTTTGGTGAAATGTTTTCGATTCACAGAGGTTTTTTCAGGAATGGCATTTATATTTTGGATAATTAGCCGCCTCCCTTTGATTCTCAGAGTTTCTAGCGGTTACATTTCTCAAATCTCCACCATTTTCACAAGCCCTGTTTTCGGCTTCGTACTCTGCAACACAATCGTCGTTGCTCTGATTTCCAAGCCCCACCGATTCTCCGGCGACAATGTCGACACCGAAATCTTCAACGAGATTGTAAAAACCAGCCCCGTTGGGTCTCTGTCTTCGCCGGAAAGCGAGCCAATCGGGTGGCTCTGTTCTGACGCAGAGCCAGAGGAGATTGCATATGAAGATAAAGAGGTGATTTGTGAGGTGAGTTCGGCGGCGGCGATGGAGTTATCGGAAACGATGGACGATTTGGATTTGGGTTCGGAGAAATTGAAGCTAGAGTGGCTGGAATTTCGTGGAGAAAAGTTCCGGCGACCGGAGACGGAGGAGGAGGCGGCGATTTGGGGAGGTGGGGTTTCGCCGGAATGTGTACGGTACGGTGAGGAGCTGAGCAATATGGATTTTCAGCGAAGGATTGAAGAGTTTATTGCAAGGGAGTTGAGGTTTCGCCGGCGAGAATCCGGCGCCGTCGTTCTTCGGAGTGGAAGTTGCCTTTGA

Protein sequence

MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFTSPVFGFVLCNTIVVALISKPHRFSGDNVDTEIFNEIVKTSPVGSLSSPESEPIGWLCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPETEEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRSGSCL

Homology

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BLAST of Sed0010817 vs. NCBI nr
Match: XP_022977278.1 (uncharacterized protein LOC111477644 [Cucurbita maxima])

HSP 1 Score: 295.4 bits (755), Expect = 4.2e-76
Identity = 160/237 (67.51%), Postives = 183/237 (77.22%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT EV+ M L++HL+TL+K FRFTEVF+ MA + W  SRLPLILRVSS YISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFFRFTEVFAAMALLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRFS-----GDNVDTEIFNEIVKTSPVGSLSSPESEPIGW 120
           SPVFGF+LCNTI++ALI+KPHRFS     GDNV+TE+ NE+VK   + SLS P SEP G 
Sbjct: 61  SPVFGFMLCNTIIIALIAKPHRFSGEKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120

Query: 121 LCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPET 180
           LCSD E EEIAYEDKEVI EVSS  A   +E ++D   GSEKLKL W EF G +F R E 
Sbjct: 121 LCSDVELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFERAEV 180

Query: 181 EEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRSGSCL 233
           EEE AIWGGGV PE VR GEELSN +F+RRI+ FIARELRFR  ESGAVVL +GSCL
Sbjct: 181 EEE-AIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCL 236

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BLAST of Sed0010817 vs. NCBI nr
Match: KAG6603959.1 (hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.0 bits (754), Expect = 5.5e-76
Identity = 160/237 (67.51%), Postives = 183/237 (77.22%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT EV+ M L++HL+TL+K FR TEVF+ MAF+ W  SRLPLILRVSS YISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRFS-----GDNVDTEIFNEIVKTSPVGSLSSPESEPIGW 120
           SP+FGF+LCNTI++ALISKPHRFS     GDNV+TE+ NE+VK   + SLS P SEP G 
Sbjct: 61  SPIFGFMLCNTIIIALISKPHRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120

Query: 121 LCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPET 180
           LCSD E EEIAYEDKEVI EVSS  A   +E ++D   GSEKLKL W EF G +F R E 
Sbjct: 121 LCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAEV 180

Query: 181 EEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRSGSCL 233
           EEE AIWGGGV PE VR GEELSN +F+RRI+ FIARELRFR  ESGAVVL +GSCL
Sbjct: 181 EEE-AIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCL 236

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BLAST of Sed0010817 vs. NCBI nr
Match: XP_023543998.1 (uncharacterized protein LOC111803706 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.4 bits (729), Expect = 4.3e-73
Identity = 157/237 (66.24%), Postives = 179/237 (75.53%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT EV+ M L++HL+TL+K  RFTEV + MAF+ W  SRLPLILRVSS YISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFLRFTEVSAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRFS-----GDNVDTEIFNEIVKTSPVGSLSSPESEPIGW 120
           SPVFGF+LCNTI++ALI+KPHRFS     GDNV+TE+ NE+VK   + SLS P SEP G 
Sbjct: 61  SPVFGFMLCNTIIIALIAKPHRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120

Query: 121 LCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPET 180
           LCSD E EEIAYEDKEVI EV S  A   +E ++D   GSEKLKL W EF G  F R E 
Sbjct: 121 LCSDLELEEIAYEDKEVISEVRSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGVFGRAEV 180

Query: 181 EEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRSGSCL 233
           E E AIWGGGV PE VR GEELSN +F+RRI+ FIAREL+FR  ESGAVVL SGSCL
Sbjct: 181 EAE-AIWGGGVLPESVRNGEELSNKEFERRIDAFIARELKFRWEESGAVVLPSGSCL 236

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BLAST of Sed0010817 vs. NCBI nr
Match: XP_022950349.1 (uncharacterized protein LOC111453461 [Cucurbita moschata])

HSP 1 Score: 284.3 bits (726), Expect = 9.7e-73
Identity = 157/237 (66.24%), Postives = 180/237 (75.95%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT EV+ M L++HL+TL+K  RFTEVF+ MAF+ W  SRLPLILRVSS YISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFLRFTEVFAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRFS-----GDNVDTEIFNEIVKTSPVGSLSSPESEPIGW 120
           SPVFGF+LCNTI++ALI+KP RFS     GDNV+TE+ NE+VK   + SLS P S P G 
Sbjct: 61  SPVFGFMLCNTIIIALIAKPPRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSGPNGR 120

Query: 121 LCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPET 180
           LCSD E EEIAYEDKEVI EVSS  A   +E ++D   GSEKLKL W EF G +F R E 
Sbjct: 121 LCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFCSGSEKLKLAWSEFGGGEFGRAEV 180

Query: 181 EEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRSGSCL 233
           E E AIWGGGV PE VR GEELSN +F+RRI+ FIARELRFR  ESGAVVL +GSCL
Sbjct: 181 EAE-AIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCL 236

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BLAST of Sed0010817 vs. NCBI nr
Match: XP_038882287.1 (uncharacterized protein LOC120073519 [Benincasa hispida])

HSP 1 Score: 276.9 bits (707), Expect = 1.5e-70
Identity = 152/232 (65.52%), Postives = 172/232 (74.14%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT +VK M + N LQ +VK FRFTEV   M F+FW  SRLPL+LRVS  YISQIS  FT
Sbjct: 1   MKTEKVKAMGVYNLLQIMVKIFRFTEVLVAMGFLFWTFSRLPLVLRVSKDYISQISNYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPH----RFSGDNVDTEIFNEIVKTSPVGSLSSPESEPIGWL 120
            PVFGF+LCNTI+VALI+KPH    + S DNV+TE+FNE+VK     SLS P SEPIG L
Sbjct: 61  GPVFGFILCNTIIVALIAKPHFSGGKISSDNVETELFNELVKDGADRSLSLPGSEPIGRL 120

Query: 121 CSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPETE 180
           CSD+  EEIAYEDKEVI EV S  A   +E  DD    SEKLKL W+EF G +FRR E E
Sbjct: 121 CSDSGQEEIAYEDKEVISEVRSMKAAIFTEKRDDFGSESEKLKLAWMEFSGGEFRRLEAE 180

Query: 181 EEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRS 229
           EE AIWGGG SPE V +GEELSN +FQRRI+ FIARELRFR  ESGAV+LRS
Sbjct: 181 EE-AIWGGGFSPESVWHGEELSNKEFQRRIDAFIARELRFRWEESGAVILRS 231

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BLAST of Sed0010817 vs. ExPASy TrEMBL
Match: A0A6J1IPH9 (uncharacterized protein LOC111477644 OS=Cucurbita maxima OX=3661 GN=LOC111477644 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.0e-76
Identity = 160/237 (67.51%), Postives = 183/237 (77.22%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT EV+ M L++HL+TL+K FRFTEVF+ MA + W  SRLPLILRVSS YISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFFRFTEVFAAMALLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRFS-----GDNVDTEIFNEIVKTSPVGSLSSPESEPIGW 120
           SPVFGF+LCNTI++ALI+KPHRFS     GDNV+TE+ NE+VK   + SLS P SEP G 
Sbjct: 61  SPVFGFMLCNTIIIALIAKPHRFSGEKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120

Query: 121 LCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPET 180
           LCSD E EEIAYEDKEVI EVSS  A   +E ++D   GSEKLKL W EF G +F R E 
Sbjct: 121 LCSDVELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFERAEV 180

Query: 181 EEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRSGSCL 233
           EEE AIWGGGV PE VR GEELSN +F+RRI+ FIARELRFR  ESGAVVL +GSCL
Sbjct: 181 EEE-AIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCL 236

[Close]

BLAST of Sed0010817 vs. ExPASy TrEMBL
Match: A0A6J1GFJ2 (uncharacterized protein LOC111453461 OS=Cucurbita moschata OX=3662 GN=LOC111453461 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.7e-73
Identity = 157/237 (66.24%), Postives = 180/237 (75.95%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT EV+ M L++HL+TL+K  RFTEVF+ MAF+ W  SRLPLILRVSS YISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFLRFTEVFAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRFS-----GDNVDTEIFNEIVKTSPVGSLSSPESEPIGW 120
           SPVFGF+LCNTI++ALI+KP RFS     GDNV+TE+ NE+VK   + SLS P S P G 
Sbjct: 61  SPVFGFMLCNTIIIALIAKPPRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSGPNGR 120

Query: 121 LCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPET 180
           LCSD E EEIAYEDKEVI EVSS  A   +E ++D   GSEKLKL W EF G +F R E 
Sbjct: 121 LCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFCSGSEKLKLAWSEFGGGEFGRAEV 180

Query: 181 EEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRSGSCL 233
           E E AIWGGGV PE VR GEELSN +F+RRI+ FIARELRFR  ESGAVVL +GSCL
Sbjct: 181 EAE-AIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCL 236

[Close]

BLAST of Sed0010817 vs. ExPASy TrEMBL
Match: A0A5A7SYQ4 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001910 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.5e-67
Identity = 147/234 (62.82%), Postives = 173/234 (73.93%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT  VK M + N LQ++VK FRFTEV   M F+ W  SRLPL+L+VSS +ISQIS  FT
Sbjct: 1   MKTEGVKAMGVYNLLQSMVKIFRFTEVLGAMGFLIWTFSRLPLVLKVSSDFISQISNYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRFSG------DNVDTEIFNEIVKTSPVGSLSSPESEPIG 120
           SPVFGF+LCN I+V+LI+KPH FSG      ++V+TE+FNE+V+   V SLS   SEP G
Sbjct: 61  SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNDVETELFNELVEDGAVTSLSLAGSEPNG 120

Query: 121 WLCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPE 180
            LCSD E E+IAYEDKEVI EV+S  A   +E M++  L SEKLKL W EF G + RR +
Sbjct: 121 RLCSDTEQEKIAYEDKEVISEVTSTRAAVFTEKMENFGLESEKLKLVWTEFGGGELRRLK 180

Query: 181 TEEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRS 229
            EEE AIWGGGVSPE V   EELSNM+FQRRI+ FIARELRFR  ESGAVVLRS
Sbjct: 181 AEEE-AIWGGGVSPERVGNREELSNMEFQRRIDAFIARELRFRWEESGAVVLRS 233

[Close]

BLAST of Sed0010817 vs. ExPASy TrEMBL
Match: A0A1S3B3G2 (uncharacterized protein LOC103485351 OS=Cucumis melo OX=3656 GN=LOC103485351 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.5e-67
Identity = 147/234 (62.82%), Postives = 173/234 (73.93%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT  VK M + N LQ++VK FRFTEV   M F+ W  SRLPL+L+VSS +ISQIS  FT
Sbjct: 1   MKTEGVKAMGVYNLLQSMVKIFRFTEVLGAMGFLIWTFSRLPLVLKVSSDFISQISNYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRFSG------DNVDTEIFNEIVKTSPVGSLSSPESEPIG 120
           SPVFGF+LCN I+V+LI+KPH FSG      ++V+TE+FNE+V+   V SLS   SEP G
Sbjct: 61  SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNDVETELFNELVEDGAVTSLSLAGSEPNG 120

Query: 121 WLCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPE 180
            LCSD E E+IAYEDKEVI EV+S  A   +E M++  L SEKLKL W EF G + RR +
Sbjct: 121 RLCSDTEQEKIAYEDKEVISEVTSTRAAVFTEKMENFGLESEKLKLVWTEFGGGELRRLK 180

Query: 181 TEEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRS 229
            EEE AIWGGGVSPE V   EELSNM+FQRRI+ FIARELRFR  ESGAVVLRS
Sbjct: 181 AEEE-AIWGGGVSPERVGNREELSNMEFQRRIDAFIARELRFRWEESGAVVLRS 233

[Close]

BLAST of Sed0010817 vs. ExPASy TrEMBL
Match: A0A0A0KM84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502870 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.8e-64
Identity = 145/234 (61.97%), Postives = 167/234 (71.37%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           MKT EVK M +   LQ +VK FRFTEV   M F+ W  SRLPL+LRVSS +ISQIS  FT
Sbjct: 1   MKTVEVKAMGVYKLLQIMVKIFRFTEVLVAMGFLIWTFSRLPLVLRVSSDFISQISNYFT 60

Query: 61  SPVFGFVLCNTIVVALISKPHRF------SGDNVDTEIFNEIVKTSPVGSLSSPESEPIG 120
           SPVFGF+LCN I+V+LI+KPH F      S  NV+T +FNE+V+   V SLS   SEP G
Sbjct: 61  SPVFGFILCNIIIVSLIAKPHNFSCGKINSDKNVETVLFNELVEDGAVTSLSLAGSEPNG 120

Query: 121 WLCSDAEPEEIAYEDKEVICEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGEKFRRPE 180
            LCSD E EEIAYEDKEVI EV+S      SE M+D  L SEKLKL W E+ G + RR +
Sbjct: 121 RLCSDTEQEEIAYEDKEVISEVTSTQTAVFSEKMEDFGLESEKLKLLWREYGGGELRRVK 180

Query: 181 TEEEAAIWGGGVSPECVRYGEELSNMDFQRRIEEFIARELRFRRRESGAVVLRS 229
            EEE AIWGGGVS E V  GEELSN +F+RRI+ FIARELRFR  ESGAVVLR+
Sbjct: 181 AEEE-AIWGGGVSREGVGNGEELSNKEFERRIDAFIARELRFRWEESGAVVLRN 233

[Close]

BLAST of Sed0010817 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-16
Identity = 73/252 (28.97%), Postives = 125/252 (49.60%), Query Frame = 0


Query: 1   MKTGEVKPMCLNNHLQTLVKCFRFTEVFSGMAFIFWIISRLPLILRVSSGYISQISTIFT 60
           +K  + K +   N    + + FR  EV   + FIFW  S+LP ++++S  ++ +I+ + +
Sbjct: 9   VKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFLRRIAAVIS 68

Query: 61  SPVFGFVLCNTIVVALISKPHRFSGDNV---DTEIFNEIVKTSPVGSLSSPESEPIGWLC 120
           +P+F F+L N+IVV L++K    +   V   +TEI+   V++  V + S P  E +    
Sbjct: 69  TPLFVFLLGNSIVVVLLTKSSDQTTTAVASAETEIYQAFVRS--VENRSKPSDEDL---- 128

Query: 121 SDAEPEEIAYEDKEVI-CEVSSAAAMELSETMDDLDLGSEKLKLEWLEFRGE-------- 180
                E I Y+DK+VI  ++ S   + + E M  +++ S+      +  R +        
Sbjct: 129 ----TEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSDVSGKQS 188

Query: 181 ----------KFRRPETEEEA-AIWGGGVSPECVRYGE-ELSNMDFQRRIEEFIARELRF 229
                       +R ETE+          S E   Y E +LSN +FQ+ IE FIA++  F
Sbjct: 189 SNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRMF 248

The following BLAST results are available for this feature:

BLAST of Sed0010817 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977278.1	4.2e-76	67.51	uncharacterized protein LOC111477644 [Cucurbita maxima]	[more]
KAG6603959.1	5.5e-76	67.51	hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023543998.1	4.3e-73	66.24	uncharacterized protein LOC111803706 [Cucurbita pepo subsp. pepo]	[more]
XP_022950349.1	9.7e-73	66.24	uncharacterized protein LOC111453461 [Cucurbita moschata]	[more]
XP_038882287.1	1.5e-70	65.52	uncharacterized protein LOC120073519 [Benincasa hispida]	[more]

BLAST of Sed0010817 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0010817 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPH9	2.0e-76	67.51	uncharacterized protein LOC111477644 OS=Cucurbita maxima OX=3661 GN=LOC111477644...	[more]
A0A6J1GFJ2	4.7e-73	66.24	uncharacterized protein LOC111453461 OS=Cucurbita moschata OX=3662 GN=LOC1114534...	[more]
A0A5A7SYQ4	6.5e-67	62.82	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A1S3B3G2	6.5e-67	62.82	uncharacterized protein LOC103485351 OS=Cucumis melo OX=3656 GN=LOC103485351 PE=...	[more]
A0A0A0KM84	1.8e-64	61.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502870 PE=4 SV=1	[more]

BLAST of Sed0010817 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66440.1	3.0e-16	28.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 11..228
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 11..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010817.1	Sed0010817.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane