Sed0010735 (gene) Chayote v1

Overview


Name	Sed0010735
Type	gene
Organism	Sechium edule (Chayote v1)
Description	B-box zinc finger family protein
Location	LG05: 44017457 .. 44018017 (+)
RNA-Seq Expression	Sed0010735
Synteny	Sed0010735

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCCTTTGTGATGTTTGCAACAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCCGCCCTCTGCGCCGCCTGCGACCGCCGCGTCCACCGCGCCAACAAGCTCGCCGGAAAACACACCCGCTTCTCCCTCCTCCGATCGGCCGCCGCCGCCACTTCGCCGCCGTTGTGCGATATCTGCCAGCTCCGGCGAGCTTTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGCGACATTCCGATCCACGCCGCCAACGAACACACCAAAAACCACTGCCGGTTCCTTCTCACCGGAGTCAAGATCTCGCCGTCGCTCGCCGCCCCTTCGGCCGCCGTCCACGGCGGCGATAAGGTTTCAGAGGAGAATGAAATTGGGGTTTTGAAGAGGGCGAAAATGGAGGATTTGCAGGCGTCGATAGTTGAAGAAAGTGGAATTAAAAATAATGGGGTTTCGTTTTCCATTTCTGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTTGAGGAATTTCTTGATTCTTCATGTCCTGCTGATGTTTTCTGTTAA

mRNA sequence

ATGAAGATCCTTTGTGATGTTTGCAACAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCCGCCCTCTGCGCCGCCTGCGACCGCCGCGTCCACCGCGCCAACAAGCTCGCCGGAAAACACACCCGCTTCTCCCTCCTCCGATCGGCCGCCGCCGCCACTTCGCCGCCGTTGTGCGATATCTGCCAGCTCCGGCGAGCTTTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGCGACATTCCGATCCACGCCGCCAACGAACACACCAAAAACCACTGCCGGTTCCTTCTCACCGGAGTCAAGATCTCGCCGTCGCTCGCCGCCCCTTCGGCCGCCGTCCACGGCGGCGATAAGGTTTCAGAGGAGAATGAAATTGGGGTTTTGAAGAGGGCGAAAATGGAGGATTTGCAGGCGTCGATAGTTGAAGAAAGTGGAATTAAAAATAATGGGGTTTCGTTTTCCATTTCTGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTTGAGGAATTTCTTGATTCTTCATGTCCTGCTGATGTTTTCTGTTAA

Coding sequence (CDS)

ATGAAGATCCTTTGTGATGTTTGCAACAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCCGCCCTCTGCGCCGCCTGCGACCGCCGCGTCCACCGCGCCAACAAGCTCGCCGGAAAACACACCCGCTTCTCCCTCCTCCGATCGGCCGCCGCCGCCACTTCGCCGCCGTTGTGCGATATCTGCCAGCTCCGGCGAGCTTTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGCGACATTCCGATCCACGCCGCCAACGAACACACCAAAAACCACTGCCGGTTCCTTCTCACCGGAGTCAAGATCTCGCCGTCGCTCGCCGCCCCTTCGGCCGCCGTCCACGGCGGCGATAAGGTTTCAGAGGAGAATGAAATTGGGGTTTTGAAGAGGGCGAAAATGGAGGATTTGCAGGCGTCGATAGTTGAAGAAAGTGGAATTAAAAATAATGGGGTTTCGTTTTCCATTTCTGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTTGAGGAATTTCTTGATTCTTCATGTCCTGCTGATGTTTTCTGTTAA

Protein sequence

MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLCDICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLAAPSAAVHGGDKVSEENEIGVLKRAKMEDLQASIVEESGIKNNGVSFSISEYLESLPGWCVEEFLDSSCPADVFC

Homology

[Close]

BLAST of Sed0010735 vs. NCBI nr
Match: KAG6571083.1 (B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010899.1 B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.0 bits (676), Expect = 4.9e-67
Identity = 144/213 (67.61%), Postives = 159/213 (74.65%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVCNKEEASVFCPSDEAALC+ACD  VHRANKLA KH+RF+LLRS   A SPP C
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRSTPTANSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLA--APSAAV 120
           DICQ+RRAFLFC EDRAILCRECDIPIH A+EHT+ H RFLLTGVK+SPS A  + S+ V
Sbjct: 61  DICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSTV 120

Query: 121 HGG-----DKVSEENEIGVL-----KRAK-----------MEDLQASIVEE-SGIKNNGV 180
            GG     ++V+ E EIG+      K+AK           MEDLQA IV    G+  NGV
Sbjct: 121 SGGGSDESEEVTIEAEIGIFKASSRKKAKMGSKGLLRGPLMEDLQAPIVGNFGGMSENGV 180

Query: 181 SFS---ISEYLESLPGWCVEEFLDSSCPADVFC 187
           SFS   ISEYLESLPGWCVEEFLDSSC ADVFC
Sbjct: 181 SFSTSNISEYLESLPGWCVEEFLDSSCVADVFC 213

[Close]

BLAST of Sed0010735 vs. NCBI nr
Match: XP_022944246.1 (B-box zinc finger protein 20-like [Cucurbita moschata])

HSP 1 Score: 262.3 bits (669), Expect = 3.2e-66
Identity = 143/213 (67.14%), Postives = 157/213 (73.71%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVCNKEEASVFCPSDEAALC+ACD  VHRANKLA KH+RF+LLRS     SPP C
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRSTPTGNSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLA--APSAAV 120
           DICQ+RRAFLFC EDRAILCRECDIPIH A+EHT+ H RFLLTGVK+SPS A  + S+ V
Sbjct: 61  DICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSTV 120

Query: 121 HGGD-----KVSEENEIGVL-----KRAK-----------MEDLQASIVEE-SGIKNNGV 180
            GG      +V+ E EIG+      K+AK           MEDLQA IV    G+  NGV
Sbjct: 121 SGGGSDESAEVTIEAEIGIFKASSRKKAKMGSKGLLRGPLMEDLQAPIVGNFGGMSENGV 180

Query: 181 SFS---ISEYLESLPGWCVEEFLDSSCPADVFC 187
           SFS   ISEYLESLPGWCVEEFLDSSC ADVFC
Sbjct: 181 SFSTSNISEYLESLPGWCVEEFLDSSCVADVFC 213

[Close]

BLAST of Sed0010735 vs. NCBI nr
Match: XP_038902472.1 (B-box zinc finger protein 21-like [Benincasa hispida])

HSP 1 Score: 261.2 bits (666), Expect = 7.0e-66
Identity = 142/203 (69.95%), Postives = 159/203 (78.33%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAAT-SPPL 60
           MKI CDVC+KEEASVFCPSDEAALCAACDR VHRANKLAGKH RFSLL+S AAA  S PL
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDRHVHRANKLAGKHNRFSLLQSTAAAVDSLPL 60

Query: 61  CDICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLA------A 120
           CDICQ+RRAFLFCREDRAILCRECDI IH+ ++HT+ H RFLLTGVK+SPS A      +
Sbjct: 61  CDICQVRRAFLFCREDRAILCRECDISIHSISDHTQKHSRFLLTGVKVSPSPATSTSSSS 120

Query: 121 PSAAVHGGDKVSEENEIGVL-----KRAKMEDL--QASIVEESGIKNNGVSF---SISEY 180
            S++V GG K   E EIG+L     KRAKME+L  Q   V +  ++ NG SF   SISEY
Sbjct: 121 SSSSVSGGGK-EIEGEIGLLKKCSKKRAKMEELPRQPLNVGKLEVEENGESFTRSSISEY 180

Query: 181 LESLPGWCVEEFLDSSCPADVFC 187
           LESLPGWCVEEFLDSSC AD+FC
Sbjct: 181 LESLPGWCVEEFLDSSCAADIFC 202

[Close]

BLAST of Sed0010735 vs. NCBI nr
Match: XP_022986607.1 (B-box zinc finger protein 20-like [Cucurbita maxima])

HSP 1 Score: 258.5 bits (659), Expect = 4.6e-65
Identity = 139/212 (65.57%), Postives = 153/212 (72.17%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVCNKEEASVFCPSDEAALC+ACD  VHRANKLA KH+RF+L RS   A SPP C
Sbjct: 1   MKIHCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLFRSTPTANSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLA--APSAAV 120
           DICQ+RRAFLF  EDRAILCRECDIPIH A+EHT+ H RFLLTGVK+SPS A  + S+++
Sbjct: 61  DICQVRRAFLFYLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSSI 120

Query: 121 HGGDKVSEENEI--------------------GVLKRAKMEDLQASIVEE-SGIKNNGVS 180
            GG   SEE  I                    G+L+   MEDLQA IV    G+  NGVS
Sbjct: 121 SGGGDESEEVTIEAEIGIFKARSRKEAKMGSKGLLRGPLMEDLQAPIVGNFGGMSENGVS 180

Query: 181 FS---ISEYLESLPGWCVEEFLDSSCPADVFC 187
           FS   ISEYLESLPGWCVEEFLDSSC ADVFC
Sbjct: 181 FSTSNISEYLESLPGWCVEEFLDSSCVADVFC 212

[Close]

BLAST of Sed0010735 vs. NCBI nr
Match: XP_023513248.1 (B-box zinc finger protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-64
Identity = 138/212 (65.09%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVCN+EEASVFCPSDEAALC+ACD  VH ANKLA KH+RF+LLRS     SPP C
Sbjct: 1   MKIRCDVCNREEASVFCPSDEAALCSACDHHVHCANKLAEKHSRFTLLRSTPTVNSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPS--LAAPSAAV 120
           DICQ+RRAFLFC EDRAILCRECDIPIH A+EHT+ H RFLLTGVK+SPS   ++ S++V
Sbjct: 61  DICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPTTSSSSSSV 120

Query: 121 HGG----DKVSEENEIGVL-----KRAK-----------MEDLQASIVEE-SGIKNNGVS 180
            GG    ++V+ E EIG+      K AK           MEDLQ  IV +  G+  NGV+
Sbjct: 121 SGGGDESEEVTIEAEIGIFKTRSRKEAKMGSKGLIRGPVMEDLQPPIVGKFGGMSENGVA 180

Query: 181 FS---ISEYLESLPGWCVEEFLDSSCPADVFC 187
           FS   ISEYLESLPGWCVEEFLDSSC ADVFC
Sbjct: 181 FSTSNISEYLESLPGWCVEEFLDSSCVADVFC 212

[Close]

BLAST of Sed0010735 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-46
Identity = 99/200 (49.50%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVC+KEEASVFC +DEA+LC  CD +VH ANKLA KH RFSLL  +++ TS PLC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLAAPSAAVHG 120
           DICQ ++A LFC++DRAILC++CD  IHAANEHTK H RFLLTGVK+S + +        
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 GDKVSEENEIGV----------LKRAKMEDLQASIVE--------ESGIKNNGVSFSISE 180
               S   +  V          LK+      Q++ ++        ++ +   G + +ISE
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISE 180

Query: 181 YL-ESLPGWCVEEFLDSSCP 182
           YL ++LPGW VE+FLDSS P
Sbjct: 181 YLMDTLPGWHVEDFLDSSLP 200

[Close]

BLAST of Sed0010735 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 107/203 (52.71%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI C VC+KEEASVFC +DEAALC  CDR VH ANKLAGKH RFSL  ++      PLC
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSL--TSPTFKDAPLC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLAA------- 120
           DIC  RRA LFC+EDRAILCRECDIPIH ANEHTK H RFLLTGVKIS S +A       
Sbjct: 61  DICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNS 120

Query: 121 PSAAVHGGDKVSEENEIGVLKRAKMEDLQASI------------------VEESGIKNNG 178
            SAA  G  K   ++    +  +   ++  S                   V +SG   +G
Sbjct: 121 NSAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSG-SGSG 180

[Close]

BLAST of Sed0010735 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-30
Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI C+VC   EA+V C +DEAALC ACD ++H ANKLAGKH R  L   +A+A+S P C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL---SASASSIPKC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKI 108
           DICQ    F FC +DRA+LCR+CD+ IH  N H   H RFLLTG+K+
Sbjct: 61  DICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104

[Close]

BLAST of Sed0010735 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.3e-29
Identity = 61/108 (56.48%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVC K  A+V C +DEAALC  CD  +H ANKLA KH R  L    + +T  P C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL---NSLSTKFPRC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKIS 109
           DICQ + AF+FC EDRA+LCR+CD  IH AN  + NH RFL TG+K++
Sbjct: 61  DICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

[Close]

BLAST of Sed0010735 vs. ExPASy Swiss-Prot
Match: O82617 (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.9e-27
Identity = 61/111 (54.95%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATS---P 60
           MKI C+VC K EA V C SDEA LC  CD +VH ANKL  +H R +L + AA+AT+    
Sbjct: 1   MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60

Query: 61  PLCDICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKIS 109
           PLCDICQ R+ + FC EDRA+LC +CD  IH  N H     RFLL+GV++S
Sbjct: 61  PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNSHQ----RFLLSGVQVS 107

[Close]

BLAST of Sed0010735 vs. ExPASy TrEMBL
Match: A0A6J1FTW5 (B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448752 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.5e-66
Identity = 143/213 (67.14%), Postives = 157/213 (73.71%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVCNKEEASVFCPSDEAALC+ACD  VHRANKLA KH+RF+LLRS     SPP C
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRSTPTGNSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLA--APSAAV 120
           DICQ+RRAFLFC EDRAILCRECDIPIH A+EHT+ H RFLLTGVK+SPS A  + S+ V
Sbjct: 61  DICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSTV 120

Query: 121 HGGD-----KVSEENEIGVL-----KRAK-----------MEDLQASIVEE-SGIKNNGV 180
            GG      +V+ E EIG+      K+AK           MEDLQA IV    G+  NGV
Sbjct: 121 SGGGSDESAEVTIEAEIGIFKASSRKKAKMGSKGLLRGPLMEDLQAPIVGNFGGMSENGV 180

Query: 181 SFS---ISEYLESLPGWCVEEFLDSSCPADVFC 187
           SFS   ISEYLESLPGWCVEEFLDSSC ADVFC
Sbjct: 181 SFSTSNISEYLESLPGWCVEEFLDSSCVADVFC 213

[Close]

BLAST of Sed0010735 vs. ExPASy TrEMBL
Match: A0A6J1J816 (B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484297 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.2e-65
Identity = 139/212 (65.57%), Postives = 153/212 (72.17%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVCNKEEASVFCPSDEAALC+ACD  VHRANKLA KH+RF+L RS   A SPP C
Sbjct: 1   MKIHCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLFRSTPTANSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLA--APSAAV 120
           DICQ+RRAFLF  EDRAILCRECDIPIH A+EHT+ H RFLLTGVK+SPS A  + S+++
Sbjct: 61  DICQVRRAFLFYLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSSI 120

Query: 121 HGGDKVSEENEI--------------------GVLKRAKMEDLQASIVEE-SGIKNNGVS 180
            GG   SEE  I                    G+L+   MEDLQA IV    G+  NGVS
Sbjct: 121 SGGGDESEEVTIEAEIGIFKARSRKEAKMGSKGLLRGPLMEDLQAPIVGNFGGMSENGVS 180

Query: 181 FS---ISEYLESLPGWCVEEFLDSSCPADVFC 187
           FS   ISEYLESLPGWCVEEFLDSSC ADVFC
Sbjct: 181 FSTSNISEYLESLPGWCVEEFLDSSCVADVFC 212

[Close]

BLAST of Sed0010735 vs. ExPASy TrEMBL
Match: A0A6J1CZ53 (B-box zinc finger protein 20-like OS=Momordica charantia OX=3673 GN=LOC111015522 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.5e-58
Identity = 132/200 (66.00%), Postives = 146/200 (73.00%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVC+ EEASVFCPSDEAALCAACDR+VHRANKLAGKH+RFSL+  A AA  PP C
Sbjct: 1   MKIRCDVCDIEEASVFCPSDEAALCAACDRQVHRANKLAGKHSRFSLIPFADAAELPPPC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLAAPSAAVHG 120
           DICQLRRA LFC+EDRAILC ECDIPIH ANEHT+NH RFLLTGVKI P+ A+ + A   
Sbjct: 61  DICQLRRAVLFCKEDRAILCSECDIPIHEANEHTRNHGRFLLTGVKILPATASSTGAGRV 120

Query: 121 GDKVSEENEIGV----LKRAK-----------MEDLQASI----VEESGIKNNGVSF--- 179
                +  +IG      KRAK           ME+ Q SI     EESGI ++GVSF   
Sbjct: 121 EGAAIDAEKIGFSRASRKRAKIGSNGLLRDPLMEEFQPSIGNLEFEESGI-SDGVSFSKS 180

[Close]

BLAST of Sed0010735 vs. ExPASy TrEMBL
Match: A0A5A7TQI3 (B-box zinc finger protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00410 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.8e-58
Identity = 123/185 (66.49%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSA--AAATSPP 60
           MKI CDVC+KEEASVFCPSDEAALC ACDR+VHRANKLA KH+RFSLL SA  AAATS P
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCPACDRQVHRANKLASKHSRFSLLHSAASAAATSQP 60

Query: 61  LCDICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLAAPSAAV 120
           LCD+CQ++RAFLFCREDRAILCRECDIPIH  +EHT+ H RFLLTGVK+SPS A  S+  
Sbjct: 61  LCDVCQIQRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSTATSSSCS 120

Query: 121 HGGDKVSEENEIGVLKRAKMEDLQASIVEESGIKNNGVSFS----ISEYLESLPGWCVEE 180
                  EENE G+LK+                K + + FS    ISEYLESLPGWCVE+
Sbjct: 121 SSVGSGGEENE-GLLKKCSR-------------KRSKMGFSKGLVISEYLESLPGWCVED 171

[Close]

BLAST of Sed0010735 vs. ExPASy TrEMBL
Match: A0A1S3CDR2 (B-box zinc finger protein 21-like OS=Cucumis melo OX=3656 GN=LOC103499713 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.8e-58
Identity = 123/185 (66.49%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSA--AAATSPP 60
           MKI CDVC+KEEASVFCPSDEAALC ACDR+VHRANKLA KH+RFSLL SA  AAATS P
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCPACDRQVHRANKLASKHSRFSLLHSAASAAATSQP 60

Query: 61  LCDICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLAAPSAAV 120
           LCD+CQ++RAFLFCREDRAILCRECDIPIH  +EHT+ H RFLLTGVK+SPS A  S+  
Sbjct: 61  LCDVCQIQRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSTATSSSCS 120

Query: 121 HGGDKVSEENEIGVLKRAKMEDLQASIVEESGIKNNGVSFS----ISEYLESLPGWCVEE 180
                  EENE G+LK+                K + + FS    ISEYLESLPGWCVE+
Sbjct: 121 SSVGSGGEENE-GLLKKCSR-------------KRSKMGFSKGLVISEYLESLPGWCVED 171

[Close]

BLAST of Sed0010735 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 187.6 bits (475), Expect = 9.2e-48
Identity = 99/200 (49.50%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVC+KEEASVFC +DEA+LC  CD +VH ANKLA KH RFSLL  +++ TS PLC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLAAPSAAVHG 120
           DICQ ++A LFC++DRAILC++CD  IHAANEHTK H RFLLTGVK+S + +        
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 GDKVSEENEIGV----------LKRAKMEDLQASIVE--------ESGIKNNGVSFSISE 180
               S   +  V          LK+      Q++ ++        ++ +   G + +ISE
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISE 180

Query: 181 YL-ESLPGWCVEEFLDSSCP 182
           YL ++LPGW VE+FLDSS P
Sbjct: 181 YLMDTLPGWHVEDFLDSSLP 200

[Close]

BLAST of Sed0010735 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 177.6 bits (449), Expect = 9.5e-45
Identity = 107/203 (52.71%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI C VC+KEEASVFC +DEAALC  CDR VH ANKLAGKH RFSL  ++      PLC
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSL--TSPTFKDAPLC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKISPSLAA------- 120
           DIC  RRA LFC+EDRAILCRECDIPIH ANEHTK H RFLLTGVKIS S +A       
Sbjct: 61  DICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNS 120

Query: 121 PSAAVHGGDKVSEENEIGVLKRAKMEDLQASI------------------VEESGIKNNG 178
            SAA  G  K   ++    +  +   ++  S                   V +SG   +G
Sbjct: 121 NSAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSG-SGSG 180

[Close]

BLAST of Sed0010735 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI C+VC   EA+V C +DEAALC ACD ++H ANKLAGKH R  L   +A+A+S P C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL---SASASSIPKC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKI 108
           DICQ    F FC +DRA+LCR+CD+ IH  N H   H RFLLTG+K+
Sbjct: 61  DICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104

[Close]

BLAST of Sed0010735 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 )

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI C+VC   EA+V C +DEAALC ACD ++H ANKLAGKH R  L   +A+A+S P C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL---SASASSIPKC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKI 108
           DICQ    F FC +DRA+LCR+CD+ IH  N H   H RFLLTG+K+
Sbjct: 61  DICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104

[Close]

BLAST of Sed0010735 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 128.3 bits (321), Expect = 6.6e-30
Identity = 61/108 (56.48%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 1   MKILCDVCNKEEASVFCPSDEAALCAACDRRVHRANKLAGKHTRFSLLRSAAAATSPPLC 60
           MKI CDVC K  A+V C +DEAALC  CD  +H ANKLA KH R  L    + +T  P C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL---NSLSTKFPRC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHAANEHTKNHCRFLLTGVKIS 109
           DICQ + AF+FC EDRA+LCR+CD  IH AN  + NH RFL TG+K++
Sbjct: 61  DICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

The following BLAST results are available for this feature:

BLAST of Sed0010735 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571083.1	4.9e-67	67.61	B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022944246.1	3.2e-66	67.14	B-box zinc finger protein 20-like [Cucurbita moschata]	[more]
XP_038902472.1	7.0e-66	69.95	B-box zinc finger protein 21-like [Benincasa hispida]	[more]
XP_022986607.1	4.6e-65	65.57	B-box zinc finger protein 20-like [Cucurbita maxima]	[more]
XP_023513248.1	2.3e-64	65.09	B-box zinc finger protein 20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0010735 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQZ7	1.3e-46	49.50	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q0IGM7	1.3e-43	52.71	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q9SYM2	2.9e-30	57.94	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q96288	9.3e-29	56.48	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
O82617	3.9e-27	54.95	B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1	[more]

BLAST of Sed0010735 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTW5	1.5e-66	67.14	B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448752 ...	[more]
A0A6J1J816	2.2e-65	65.57	B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484297 PE...	[more]
A0A6J1CZ53	1.5e-58	66.00	B-box zinc finger protein 20-like OS=Momordica charantia OX=3673 GN=LOC111015522...	[more]
A0A5A7TQI3	5.8e-58	66.49	B-box zinc finger protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CDR2	5.8e-58	66.49	B-box zinc finger protein 21-like OS=Cucumis melo OX=3656 GN=LOC103499713 PE=4 S...	[more]

BLAST of Sed0010735 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75540.1	9.2e-48	49.50	salt tolerance homolog2	[more]
AT4G39070.1	9.5e-45	52.71	B-box zinc finger family protein	[more]
AT1G78600.1	2.1e-31	57.94	light-regulated zinc finger protein 1	[more]
AT1G78600.2	2.1e-31	57.94	light-regulated zinc finger protein 1	[more]
AT1G06040.2	6.6e-30	56.48	B-box zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 55..102 e-value: 8.5E-14 score: 61.8 coord: 4..47 e-value: 1.6E-10 score: 51.0
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 57..94 e-value: 2.5E-5 score: 24.3 coord: 3..44 e-value: 2.9E-7 score: 30.5
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.693852
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 55..102 score: 9.484778
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..101 e-value: 9.9E-10 score: 40.8
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..180
None	No IPR available	PANTHER	PTHR31832:SF18	B-BOX ZINC FINGER PROTEIN 21	coord: 1..180
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 4..47 e-value: 1.63491E-14 score: 62.7003
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 59..102 e-value: 1.81752E-13 score: 60.0039

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010735.1	Sed0010735.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding