Sed0010707 (gene) Chayote v1

Overview


Name	Sed0010707
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Location	LG06: 4335765 .. 4339217 (+)
RNA-Seq Expression	Sed0010707
Synteny	Sed0010707

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATTTCACCAATAGTTATTCTGTTTTCTTCTTCTTCCTCTGAGGCAACAATGGCGAGTGGAATTCTGAGAAGGGCAATTTCTAGGGTTTCTGCAACTCCACCGTCAAGATTCCTCCGATTCCAACCCCACGCTTCAGAAGCTGAAGCGCAGAAAATGGAGCAAAAAGCAGCCGTTTCTTCAACCCTAAAGACGTTCGCCATCTACCGATGGAATCCCGATCGCCCTTCCAAACCGAAGCTCGAGGAGTACAAGATCGACCTCAAGGAGTGCGGCCCCATGGTGCTGGATGCCCTAATCAAGATCAAGAACGAGATCGATCCGACCCTCACCTTCCGCCGCTCCTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATAGATGGATGTAATGGATTGGCTTGCTTGACGAAGATTCCGCCCGGTTCGTCGTCGCTGTCGATTACGCCGCTGCCTCATATGTACGTGCTGAAGGATCTGGTGGTGGATATGACGAATTTCTATAATCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGGCGGAGGTGCCGGGGAAGGAGATTCTTCAGAGTAAGAAAGATCGGGCGAAGCTGGATGGGATGTATGAGTGTATATTGTGCGCTTGTTGTAGTACTTCCTGCCCTAGCTATTGGTGGAATCCGGAGTCTTATCTTGGACCTGCCGCTTTGCTCCATGCTAATAGGTAATCCGTTCCTTCACTTTGGTCGTTTTGTTTAGTTTTTCTTTGATTCTTTGTTTGTTAGAAATGGAAGGAAATGCAGACTGTTTAGATGAATTGAGAAGCTAATTGTGAAGGTTCTTGAACTGTTGGAGGATTCAGGACGGGTTTTCAGTTTTATTTCTGTTGGATTACATAACTCATGGTGCTACCTACCTAGTAATTAATTTCCGGTCGAATTCCTTGACATCTAGGATTAGGCAGTAATAGTATGTCTGGTGAAGATGATGTGTGTGTAAGCGAGTTTGGACACTTACTGATATAAAAGTAAAAAAAGGGGAAAAGAGTTCTGTTGGATTAAATAGTAGGCAACAACAATAGGGCTTACGTGCGTTATGGTTCCTGAACTCTTGGAGGATTCTAGTGTACTCCTGAACATTTGGAGGATTCTGGTGTGTGATGTTGCTATAAAAATTTAGACAAAGGAAGATGTTGATTTATGGTTTTTCTATTGAAAAGTTAGAAGGGAAAGATGATCTAAAATCGAATGAAGAGATTATAAAAGATAGGAACAGGTATCAGAGTATCAAAAAAAATCCGAGAGACCAGTGAACTTATTGTGGTGTGAAATAGAGCCATGGAGTATGTTGAGGTGCCATTAGTGGGGTTTGTGGTTGGGCACGGCACATGCCTAGGTGTTTTTTATGTACATCAATGTCCAAGTTAGCTTACGCATACCTCGACTATTCAAACACATGATCTCTTGGTCATTGGTCTCTACTTATGTCGATTGATTTATGCTATTGTTGTCCCTATATAATAAGCACATGTGTACGTATAAAAAAATCGGTAGTTTTTTTTCACAAACTCTTACCCCATCAAGGAATATGTTAGGTATTCAATAACTAAGGGGTCTTTAGAACTCATAAAATATCAGAATCCAGATTGATATATATACACACACACAAAAACAAGAATGATAATGGAAACGTTAACAATTGGAGAGCTCTTTCGTATTTCTATGGGGTTCATATAGACTATTTTGACGTTATAATTTCATATTTATAATCAAATTGTTTTTTATCCAAAAAAAAAAAGATAATGGAAACGTTGGCTTGACAATACACTCGGCACATTTGAGAGTGTCGATGACCTCTCCTCTCTAGGTTACTCAACCTTAGACAAAAACAAGCCTCCCCTCCCCTACACCACTACTCCCTCATTTATATTCAATACTCTCTCTCCATACAAGCCTAACCACTCACATGGTCCCCTAACTAACTTGCCCACCAGAATACCTCTTTTACCCTTTCTAGAATTCTCTTGCATTATTAGGGGTCTCACAGAGTAGTCAAAACTCAGGTTGTGTCTTCTCAATTCTTAGAAAGTGTTTTCCCTCTCCTTGTTAATGAAAATAGGCCCTTGCATGGCAGAATTTCTATGATTTGGTTGGTTGCCTACTTTATAGAGAACCAAGTCATTTCCTTTCGTTGTTTTATCTATGTTCAACAAAATCTTGACATGCCTTGGTAGCCTAAATCTCAAACTCATTGTTTTCTTCAGTTTCTTGGTGAGTTTCAACCTTTGTAGTTAGTCCTTACTTTTAAGTAGTTCACTAAATAGAGAGTGGGTGGAGTGGATGATGAACTGTCCGGAAAGGTTTTGCTGGTATTTCATAAAAATGTTTTTGATCCACAAAACTCACTCAAATATATTATAGTAAGCTTGATTGGTGACATCTGAAAGACAAAATTTGAACATGATATGTTTCCTACAACAATCAAGAGCTCAGCCTTTTATAATTGACAACTTAGGAGATTGCTCTTCAACATCAACATCTTACTGACATATCCTACATTATGGAGAAAGCTGTACTTGTTCTATTTGGTATTAGTTTGTTGAATGCATAGCAATCATCAGAAAACATAGAAGAAAAAACTGCCTTGAGTTGGCTTAGAAGTAATGGATTCATGCCACCTGATTGAGATTATTTAGTTCACTTGCCTGTTTTACAAAAAACAAAAAATAAAAAGAAGCATTGATCATTGATCTAAAGGTTTACATCTGCCTAAAATAACTTTGTATTGATATATAATTCATGCATTCGTAAGTTTTTTTCTCTGAATAAGTTTTCATGAGTTCACGTATCTTATGTAATTGCATGATTGTTCCTTTCTTTCATCTCCCAACTTCCTATCTACAACCATGATATTACAAGAAGATATACTTATGGCTAATGGCTACGATTAAATTGATTACAAAATCAAATTTTGATCAAGGACTATTTCTTAATTACAAAATGGTCCTCTTTATTCCACTTTGTACATGCAGGTGGATTAGCGATAGCCGTGACGAATACACGAAGGAGCGACTTGAGGCAATAGATGATGAATTCAAGCTCTATCGCTGTCATACTATACTGAACTGCACCCGCGCCTGTCCAAAGGGCTTGAACCCAGGAAAACAGATCCAAAATATCAAAAAACTTCAGCTTTTGGGTTGAGCTTAAGGTACACAAAAGCACAATAATTTTCTTTTTGTTCAGTTGTGGAATATCTTGTGAGGACTCATGAGCCATGTGACTTGTGGATCATTAACTTTCCACCCATTCTGTACTGACAATTGGGTTCTAAGTATTTTTATCTGTGTCCCCAAATAAATGTTGATGGAAACTTCTTGGCTTCATCTTTAGCTGCTGTACCATGATTATTATCCTTTATTGATTTTATTTTATTAAAGTTGGCTCATCCAAAAATCAAA

mRNA sequence

ATTTATTTCACCAATAGTTATTCTGTTTTCTTCTTCTTCCTCTGAGGCAACAATGGCGAGTGGAATTCTGAGAAGGGCAATTTCTAGGGTTTCTGCAACTCCACCGTCAAGATTCCTCCGATTCCAACCCCACGCTTCAGAAGCTGAAGCGCAGAAAATGGAGCAAAAAGCAGCCGTTTCTTCAACCCTAAAGACGTTCGCCATCTACCGATGGAATCCCGATCGCCCTTCCAAACCGAAGCTCGAGGAGTACAAGATCGACCTCAAGGAGTGCGGCCCCATGGTGCTGGATGCCCTAATCAAGATCAAGAACGAGATCGATCCGACCCTCACCTTCCGCCGCTCCTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATAGATGGATGTAATGGATTGGCTTGCTTGACGAAGATTCCGCCCGGTTCGTCGTCGCTGTCGATTACGCCGCTGCCTCATATGTACGTGCTGAAGGATCTGGTGGTGGATATGACGAATTTCTATAATCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGGCGGAGGTGCCGGGGAAGGAGATTCTTCAGAGTAAGAAAGATCGGGCGAAGCTGGATGGGATGTATGAGTGTATATTGTGCGCTTGTTGTAGTACTTCCTGCCCTAGCTATTGGTGGAATCCGGAGTCTTATCTTGGACCTGCCGCTTTGCTCCATGCTAATAGGTGGATTAGCGATAGCCGTGACGAATACACGAAGGAGCGACTTGAGGCAATAGATGATGAATTCAAGCTCTATCGCTGTCATACTATACTGAACTGCACCCGCGCCTGTCCAAAGGGCTTGAACCCAGGAAAACAGATCCAAAATATCAAAAAACTTCAGCTTTTGGGTTGAGCTTAAGGTACACAAAAGCACAATAATTTTCTTTTTGTTCAGTTGTGGAATATCTTGTGAGGACTCATGAGCCATGTGACTTGTGGATCATTAACTTTCCACCCATTCTGTACTGACAATTGGGTTCTAAGTATTTTTATCTGTGTCCCCAAATAAATGTTGATGGAAACTTCTTGGCTTCATCTTTAGCTGCTGTACCATGATTATTATCCTTTATTGATTTTATTTTATTAAAGTTGGCTCATCCAAAAATCAAA

Coding sequence (CDS)

ATGGCGAGTGGAATTCTGAGAAGGGCAATTTCTAGGGTTTCTGCAACTCCACCGTCAAGATTCCTCCGATTCCAACCCCACGCTTCAGAAGCTGAAGCGCAGAAAATGGAGCAAAAAGCAGCCGTTTCTTCAACCCTAAAGACGTTCGCCATCTACCGATGGAATCCCGATCGCCCTTCCAAACCGAAGCTCGAGGAGTACAAGATCGACCTCAAGGAGTGCGGCCCCATGGTGCTGGATGCCCTAATCAAGATCAAGAACGAGATCGATCCGACCCTCACCTTCCGCCGCTCCTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATAGATGGATGTAATGGATTGGCTTGCTTGACGAAGATTCCGCCCGGTTCGTCGTCGCTGTCGATTACGCCGCTGCCTCATATGTACGTGCTGAAGGATCTGGTGGTGGATATGACGAATTTCTATAATCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGGCGGAGGTGCCGGGGAAGGAGATTCTTCAGAGTAAGAAAGATCGGGCGAAGCTGGATGGGATGTATGAGTGTATATTGTGCGCTTGTTGTAGTACTTCCTGCCCTAGCTATTGGTGGAATCCGGAGTCTTATCTTGGACCTGCCGCTTTGCTCCATGCTAATAGGTGGATTAGCGATAGCCGTGACGAATACACGAAGGAGCGACTTGAGGCAATAGATGATGAATTCAAGCTCTATCGCTGTCATACTATACTGAACTGCACCCGCGCCTGTCCAAAGGGCTTGAACCCAGGAAAACAGATCCAAAATATCAAAAAACTTCAGCTTTTGGGTTGA

Protein sequence

MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPSKPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG

Homology

[Close]

BLAST of Sed0010707 vs. NCBI nr
Match: XP_022928182.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 255/278 (91.73%), Postives = 267/278 (96.04%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MA+GILRRAISRVSATPPSRFLR + HASEA AQK+EQKAAVSSTLKTFAIYRWNPD PS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+LEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP   SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSK+
Sbjct: 121 TKIPSDPSS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQ 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQNIK+LQL+G
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of Sed0010707 vs. NCBI nr
Match: KAG6588927.1 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 532.3 bits (1370), Expect = 2.4e-147
Identity = 254/278 (91.37%), Postives = 268/278 (96.40%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MA+GILRRAISRVSATPPSRFLR + HASEA AQK+EQKAAVSSTLKTFAIYRWNPD PS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+L+EYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP  +SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSK+
Sbjct: 121 TKIPSDASS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQ 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQNIK+LQL+G
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of Sed0010707 vs. NCBI nr
Match: XP_023530873.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.2 bits (1367), Expect = 5.4e-147
Identity = 253/278 (91.01%), Postives = 268/278 (96.40%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MA+GILRRAISRVSATPPSRFLR + HASEA AQK+EQKAAVSSTLKTFAIYRWNPD PS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+L+EYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP  +SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSK+
Sbjct: 121 TKIPSDASS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQ 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQNIK+LQL+G
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of Sed0010707 vs. NCBI nr
Match: KAG7022695.1 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 530.4 bits (1365), Expect = 9.3e-147
Identity = 253/277 (91.34%), Postives = 267/277 (96.39%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MA+GILRRAISRVSATPPSRFLR + HASEA AQK+EQKAAVSSTLKTFAIYRWNPD PS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+L+EYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP  +SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSK+
Sbjct: 121 TKIPSDASS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQ 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLL 278
           DEFKLYRCHTILNC RACPKGLNPGKQIQNIK+LQL+
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLI 276

[Close]

BLAST of Sed0010707 vs. NCBI nr
Match: XP_022983213.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 529.3 bits (1362), Expect = 2.1e-146
Identity = 250/278 (89.93%), Postives = 267/278 (96.04%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MASGILRRAI+RVSATPPSRF+R + HA+ AEAQ++EQKAA S+ LKTFAIYRWNPD PS
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+L+EYKIDLKECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP G+SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSKK
Sbjct: 121 TKIPSGASS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKK 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQNIK+LQL+G
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Sed0010707 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 459.1 bits (1180), Expect = 3.4e-128
Identity = 216/280 (77.14%), Postives = 241/280 (86.07%), Query Frame = 0


Query: 1   MASGILRRAISRVSA--TPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDR 60
           MA G++ R +   S+  +  +R +  +  ++ +EAQ         ++LKTF IYRWNPD 
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KP+L++YKIDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQS 180
           CLTKI  GS   +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRK+ A VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           IDDEFKLYRCHTILNC RACPKGLNPGKQI +IK+LQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]

BLAST of Sed0010707 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 450.7 bits (1158), Expect = 1.2e-125
Identity = 218/283 (77.03%), Postives = 236/283 (83.39%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRF--------LRFQPHASEAEAQKMEQKAAVSSTLKTFAIY 60
           MASG+    I R+  T PS+          R+    +EAE  K        S LKTF IY
Sbjct: 1   MASGL----IGRLVGTKPSKLATAARLIPARWTSTGAEAET-KASSGGGRGSNLKTFQIY 60

Query: 61  RWNPDRPSKPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNID 120
           RWNPD P KP+L+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNID
Sbjct: 61  RWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNID 120

Query: 121 GCNGLACLTKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPG 180
           GCNGLACLTKI   +S  +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRK+ A VP 
Sbjct: 121 GCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPA 180

Query: 181 KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT 240
           KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT
Sbjct: 181 KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT 240

Query: 241 KERLEAIDDEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQ 276
           KERLEAIDDEFKLYRCHTILNC RACPKGLNPGKQI +IK+LQ
Sbjct: 241 KERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Sed0010707 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.3e-114
Identity = 198/279 (70.97%), Postives = 227/279 (81.36%), Query Frame = 0


Query: 2   ASGILRR---AISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDR 61
           A+ +LRR   A + +S    SR +  +PH+S         KA  ++  KTF+IYRW+PD 
Sbjct: 3   AAALLRRSPAARALLSPALSSRLVASKPHSSSPAPPPPPSKAGANT--KTFSIYRWDPDS 62

Query: 62  PS-KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 121
           PS KP L++YK+DL +CGPMVLD L+KIKNE DP+LTFRRSCREGICGSCAMNIDG NGL
Sbjct: 63  PSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGL 122

Query: 122 ACLTKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQ 181
           ACLTKI   SS+ +I+PLPHM+V+KDLVVDMTNFYNQYKS+EPWLKRK     PGKEI Q
Sbjct: 123 ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEIPQ 182

Query: 182 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 241
           +K DRAKLDGMYECILCACCSTSCPSYWWNPE YLGPAALLHANRWI DSRD++TKERL+
Sbjct: 183 TKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLD 242

Query: 242 AIDDEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQL 277
           +I+DEFKLYRCHTI NCT ACPKGLNP K I  IKKLQL
Sbjct: 243 SINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]

BLAST of Sed0010707 vs. ExPASy Swiss-Prot
Match: P21914 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster OX=7227 GN=SdhB PE=2 SV=2)

HSP 1 Score: 352.8 bits (904), Expect = 3.5e-96
Identity = 170/272 (62.50%), Postives = 206/272 (75.74%), Query Frame = 0


Query: 7   RRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRP-SKPKLE 66
           R+ +SRV +      +R   + +    Q+ + K A    +K F IYRWNPD    KP ++
Sbjct: 7   RQILSRVGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQ 66

Query: 67  EYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPP 126
            Y++DL+ECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G N LAC++KI  
Sbjct: 67  TYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDI 126

Query: 127 GSS-SLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEA-EVPGK-EILQSKKDR 186
            +S SL + PLPHMYV++DLV DM NFY QY++I+PWL+RK+EA E  GK + LQS +DR
Sbjct: 127 NTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDR 186

Query: 187 AKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDE 246
           +KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE + ERL  + D 
Sbjct: 187 SKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDP 246

Query: 247 FKLYRCHTILNCTRACPKGLNPGKQIQNIKKL 275
           F +YRCHTI+NCTR CPKGLNPG+ I  IKKL
Sbjct: 247 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 278

[Close]

BLAST of Sed0010707 vs. ExPASy Swiss-Prot
Match: Q9YHT2 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallus gallus OX=9031 GN=SDHB PE=1 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.9e-96
Identity = 168/265 (63.40%), Postives = 204/265 (76.98%), Query Frame = 0


Query: 18  PSRFLR--FQP----HASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRP-SKPKLEEYKID 77
           P+RFLR   +P     A     +  +  AA +S +K F+IYRW+PD+P  KP+++ Y++D
Sbjct: 15  PARFLRAGLRPVRGLEAVHGICRGAQTAAAATSRIKKFSIYRWDPDKPGDKPRMQTYEVD 74

Query: 78  LKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPPG-SSS 137
           L +CGPMVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G N LAC  KI P  S +
Sbjct: 75  LNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKT 134

Query: 138 LSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKKDRAKLDGMY 197
             I PLPHMYV+KDLV D++NFY QYKSIEP+LK+K E++   ++ LQS +DR KLDG+Y
Sbjct: 135 TKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLY 194

Query: 198 ECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCH 257
           ECILCACCSTSCPSYWWN + YLGPA L+ A RW+ DSRD+YT+ERL  + D F LYRCH
Sbjct: 195 ECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCH 254

Query: 258 TILNCTRACPKGLNPGKQIQNIKKL 275
           TI+NCTR CPKGLNPGK I  IKK+
Sbjct: 255 TIMNCTRTCPKGLNPGKAIAEIKKM 279

[Close]

BLAST of Sed0010707 vs. ExPASy TrEMBL
Match: A0A6J1EJ68 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111435079 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.9e-148
Identity = 255/278 (91.73%), Postives = 267/278 (96.04%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MA+GILRRAISRVSATPPSRFLR + HASEA AQK+EQKAAVSSTLKTFAIYRWNPD PS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+LEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP   SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSK+
Sbjct: 121 TKIPSDPSS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQ 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQNIK+LQL+G
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of Sed0010707 vs. ExPASy TrEMBL
Match: A0A6J1J748 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111481863 PE=3 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 1.0e-146
Identity = 250/278 (89.93%), Postives = 267/278 (96.04%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MASGILRRAI+RVSATPPSRF+R + HA+ AEAQ++EQKAA S+ LKTFAIYRWNPD PS
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+L+EYKIDLKECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP G+SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSKK
Sbjct: 121 TKIPSGASS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKK 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQNIK+LQL+G
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Sed0010707 vs. ExPASy TrEMBL
Match: A0A6J1F9C7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441997 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.8e-146
Identity = 250/278 (89.93%), Postives = 266/278 (95.68%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MASGILRRAI+RVSAT PSRF+R + HAS AEAQ++EQKAA S+ LKTFAIYRWNPD PS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+L+EYKIDLKECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP G+SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSKK
Sbjct: 121 TKIPSGASS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKK 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQNIK+LQL+G
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Sed0010707 vs. ExPASy TrEMBL
Match: A0A6J1JPN7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486619 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.5e-146
Identity = 251/278 (90.29%), Postives = 267/278 (96.04%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MA+GILRRAISRVSAT PSRFLR + HASEA AQK+EQKAAVSSTLKTFAIYRWNPD PS
Sbjct: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+L+EYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP  +SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSK+
Sbjct: 121 TKIPSDASS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQ 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQ+IK+LQL+G
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 277

[Close]

BLAST of Sed0010707 vs. ExPASy TrEMBL
Match: E5GCD7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.4e-145
Identity = 248/278 (89.21%), Postives = 263/278 (94.60%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRPS 60
           MA+GILRR +SRVSA+ PSRF+R + HASEAEAQ++EQKA  SS LKTFAIYRWNPD PS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KP+L+EYKIDLKECGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKK 180
           TKIP G SS +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRKSE  VPGKEILQSKK
Sbjct: 121 TKIPSGDSS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKK 180

Query: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 240
           DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI+
Sbjct: 181 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIN 240

Query: 241 DEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           DEFKLYRCHTILNC RACPKGLNPGKQIQ+IK LQLLG
Sbjct: 241 DEFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]

BLAST of Sed0010707 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 459.1 bits (1180), Expect = 2.4e-129
Identity = 216/280 (77.14%), Postives = 241/280 (86.07%), Query Frame = 0


Query: 1   MASGILRRAISRVSA--TPPSRFLRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDR 60
           MA G++ R +   S+  +  +R +  +  ++ +EAQ         ++LKTF IYRWNPD 
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KP+L++YKIDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQS 180
           CLTKI  GS   +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRK+ A VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQLLG 279
           IDDEFKLYRCHTILNC RACPKGLNPGKQI +IK+LQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]

BLAST of Sed0010707 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 450.7 bits (1158), Expect = 8.7e-127
Identity = 218/283 (77.03%), Postives = 236/283 (83.39%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRF--------LRFQPHASEAEAQKMEQKAAVSSTLKTFAIY 60
           MASG+    I R+  T PS+          R+    +EAE  K        S LKTF IY
Sbjct: 1   MASGL----IGRLVGTKPSKLATAARLIPARWTSTGAEAET-KASSGGGRGSNLKTFQIY 60

Query: 61  RWNPDRPSKPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNID 120
           RWNPD P KP+L+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNID
Sbjct: 61  RWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNID 120

Query: 121 GCNGLACLTKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPG 180
           GCNGLACLTKI   +S  +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRK+ A VP 
Sbjct: 121 GCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPA 180

Query: 181 KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT 240
           KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT
Sbjct: 181 KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT 240

Query: 241 KERLEAIDDEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQ 276
           KERLEAIDDEFKLYRCHTILNC RACPKGLNPGKQI +IK+LQ
Sbjct: 241 KERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Sed0010707 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 450.7 bits (1158), Expect = 8.7e-127
Identity = 218/283 (77.03%), Postives = 236/283 (83.39%), Query Frame = 0


Query: 1   MASGILRRAISRVSATPPSRF--------LRFQPHASEAEAQKMEQKAAVSSTLKTFAIY 60
           MASG+    I R+  T PS+          R+    +EAE  K        S LKTF IY
Sbjct: 1   MASGL----IGRLVGTKPSKLATAARLIPARWTSTGAEAET-KASSGGGRGSNLKTFQIY 60

Query: 61  RWNPDRPSKPKLEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNID 120
           RWNPD P KP+L+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNID
Sbjct: 61  RWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNID 120

Query: 121 GCNGLACLTKIPPGSSSLSITPLPHMYVLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPG 180
           GCNGLACLTKI   +S  +ITPLPHM+V+KDLVVDMTNFYNQYKSIEPWLKRK+ A VP 
Sbjct: 121 GCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPA 180

Query: 181 KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT 240
           KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT
Sbjct: 181 KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT 240

Query: 241 KERLEAIDDEFKLYRCHTILNCTRACPKGLNPGKQIQNIKKLQ 276
           KERLEAIDDEFKLYRCHTILNC RACPKGLNPGKQI +IK+LQ
Sbjct: 241 KERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Sed0010707 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 324.7 bits (831), Expect = 7.2e-89
Identity = 162/259 (62.55%), Postives = 188/259 (72.59%), Query Frame = 0


Query: 22  LRFQPHASEAEAQKMEQKAAVSSTLKTFAIYRWNPDRP-SKPKLEEYKIDLKECGPMVLD 81
           L+ Q    E E Q  E K       K F IYRWNPD+P SKP L+ + +DL  CGPMVLD
Sbjct: 49  LKSQDITKEKEGQHKEVK-------KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLD 108

Query: 82  ALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPPGSSSLS-ITPLPHMY 141
            L KIK E D +L++RRSCREGICGSC+MNIDG N +ACL  I P +S  + ITPLPHMY
Sbjct: 109 VLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMY 168

Query: 142 VLKDLVVDMTNFYNQYKSIEPWLKRKSEAEVPGKEILQSKKDRAKLDGMYECILCACCST 201
           V+KDLVVD+TNFY QYKS+EPWLK +   +  G+E  QS KDR KLDG+YECILCACC+T
Sbjct: 169 VIKDLVVDLTNFYQQYKSMEPWLKTRKPPK-DGREHRQSPKDRKKLDGLYECILCACCTT 228

Query: 202 SCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCTRAC 261
           SCPSYWWNPE + GPAALL A RWISDSRDEY +ERL+AI + E K+YRC  I NCT  C
Sbjct: 229 SCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCRAIKNCTATC 288

Query: 262 PKGLNPGKQIQNIKKLQLL 278
           PKGLNP   I  +K   LL
Sbjct: 289 PKGLNPASAILKMKSKHLL 299

The following BLAST results are available for this feature:

BLAST of Sed0010707 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928182.1	1.4e-147	91.73	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]
KAG6588927.1	2.4e-147	91.37	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, parti...	[more]
XP_023530873.1	5.4e-147	91.01	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]
KAG7022695.1	9.3e-147	91.34	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur...	[more]
XP_022983213.1	2.1e-146	89.93	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur...	[more]

BLAST of Sed0010707 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB02	3.4e-128	77.14	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara...	[more]
Q8LBZ7	1.2e-125	77.03	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara...	[more]
Q9S827	1.3e-114	70.97	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory...	[more]
P21914	3.5e-96	62.50	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Droso...	[more]
Q9YHT2	5.9e-96	63.40	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallu...	[more]

BLAST of Sed0010707 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ68	6.9e-148	91.73	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1J748	1.0e-146	89.93	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1F9C7	3.8e-146	89.93	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1JPN7	8.5e-146	90.29	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
E5GCD7	9.4e-145	89.21	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]

BLAST of Sed0010707 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40650.1	2.4e-129	77.14	succinate dehydrogenase 2-2	[more]
AT3G27380.1	8.7e-127	77.03	succinate dehydrogenase 2-1	[more]
AT3G27380.2	8.7e-127	77.03	succinate dehydrogenase 2-1	[more]
AT5G65165.1	7.2e-89	62.55	succinate dehydrogenase 2-3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025192	Succinate dehydogenase/fumarate reductase N-terminal	PFAM	PF13085	Fer2_3	coord: 48..152 e-value: 3.2E-32 score: 110.8
IPR009051	Alpha-helical ferredoxin	GENE3D	1.10.1060.10		coord: 148..277 e-value: 1.5E-52 score: 178.9
IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein	TIGRFAM	TIGR00384	TIGR00384	coord: 51..272 e-value: 1.3E-82 score: 274.5
None	No IPR available	PFAM	PF13534	Fer4_17	coord: 190..263 e-value: 2.8E-9 score: 37.4
None	No IPR available	PANTHER	PTHR11921:SF44	SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL	coord: 16..275
None	No IPR available	PANTHER	PTHR11921	SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN	coord: 16..275
None	No IPR available	SUPERFAMILY	46548	alpha-helical ferredoxin	coord: 148..274
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 36..147 e-value: 6.0E-40 score: 137.6
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 191..202
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 99..107
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 181..211 score: 7.894782
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..138 score: 9.458714
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 78..112 e-value: 0.00599918 score: 33.1372
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 45..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010707.1	Sed0010707.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045273	respiratory chain complex II
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity