Sed0010617 (gene) Chayote v1

Overview
NameSed0010617
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRNase H domain-containing protein
LocationLG01: 2284182 .. 2284751 (+)
RNA-Seq ExpressionSed0010617
SyntenySed0010617
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATTGTTGTGGAGGAGAAATGGATTGCCCCTCCTAGAGGTTGTTGGAAGCTGAATACTGATGCTTCCTTTAATTTTTCGTCTAGTATAGGGGGCATTGGCTGGATTGTTCGTGACGGGAGAGGTGTTCCAAAGATTGTTGGGTGGAAGGCTAGGCACAAGAGTTCTTCTGTCAAGGTCCTTGAAGGCCTGGCTATTCGCGATGCTCTAAGCTTTATCCACGAGGCCGATATTCAAATGCTTCCCCCGATTCTTGTTGAATCCGACGCTTTAGAGGTGATCAAGGCCATTTCGGAGGATTCTTTAGATTGCTCTGAGTTCAACAATATCATTATTGATATTAGATGGTTTATGGCAGCGCTTGGGATGGTTTCTGTGTCTCATTGTGGTAGGCGTTGTAATAGGGCGGCTGATTTGCTTGCCAAGTTAGATGGTTCTGATTCTGTTTGTCATATTTATCCTCCCTATCCGGTGGAAGATTGTATTTCCTTTTGGAAGGGGATTCTTCCCCCTGTTGTAGGCTCCATGGTGGAGATGGATTGTGTTGGTTTGTTTGGCTTGGGTTGA

mRNA sequence

ATGAAGATTGTTGTGGAGGAGAAATGGATTGCCCCTCCTAGAGGTTGTTGGAAGCTGAATACTGATGCTTCCTTTAATTTTTCGTCTAGTATAGGGGGCATTGGCTGGATTGTTCGTGACGGGAGAGGTGTTCCAAAGATTGTTGGGTGGAAGGCTAGGCACAAGAGTTCTTCTGTCAAGGTCCTTGAAGGCCTGGCTATTCGCGATGCTCTAAGCTTTATCCACGAGGCCGATATTCAAATGCTTCCCCCGATTCTTGTTGAATCCGACGCTTTAGAGGTGATCAAGGCCATTTCGGAGGATTCTTTAGATTGCTCTGAGTTCAACAATATCATTATTGATATTAGATGGTTTATGGCAGCGCTTGGGATGGTTTCTGTGTCTCATTGTGGTAGGCGTTGTAATAGGGCGGCTGATTTGCTTGCCAAGTTAGATGGTTCTGATTCTGTTTGTCATATTTATCCTCCCTATCCGGTGGAAGATTGTATTTCCTTTTGGAAGGGGATTCTTCCCCCTGTTGTAGGCTCCATGGTGGAGATGGATTGTGTTGGTTTGTTTGGCTTGGGTTGA

Coding sequence (CDS)

ATGAAGATTGTTGTGGAGGAGAAATGGATTGCCCCTCCTAGAGGTTGTTGGAAGCTGAATACTGATGCTTCCTTTAATTTTTCGTCTAGTATAGGGGGCATTGGCTGGATTGTTCGTGACGGGAGAGGTGTTCCAAAGATTGTTGGGTGGAAGGCTAGGCACAAGAGTTCTTCTGTCAAGGTCCTTGAAGGCCTGGCTATTCGCGATGCTCTAAGCTTTATCCACGAGGCCGATATTCAAATGCTTCCCCCGATTCTTGTTGAATCCGACGCTTTAGAGGTGATCAAGGCCATTTCGGAGGATTCTTTAGATTGCTCTGAGTTCAACAATATCATTATTGATATTAGATGGTTTATGGCAGCGCTTGGGATGGTTTCTGTGTCTCATTGTGGTAGGCGTTGTAATAGGGCGGCTGATTTGCTTGCCAAGTTAGATGGTTCTGATTCTGTTTGTCATATTTATCCTCCCTATCCGGTGGAAGATTGTATTTCCTTTTGGAAGGGGATTCTTCCCCCTGTTGTAGGCTCCATGGTGGAGATGGATTGTGTTGGTTTGTTTGGCTTGGGTTGA

Protein sequence

MKIVVEEKWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLAIRDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVSVSHCGRRCNRAADLLAKLDGSDSVCHIYPPYPVEDCISFWKGILPPVVGSMVEMDCVGLFGLG
Homology
BLAST of Sed0010617 vs. NCBI nr
Match: XP_042983291.1 (uncharacterized protein LOC122312694 [Carya illinoinensis])

HSP 1 Score: 84.7 bits (208), Expect = 9.2e-13
Identity = 57/174 (32.76%), Postives = 84/174 (48.28%), Query Frame = 0

Query: 8   KWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLAI 67
           KW  PP G +KLN D +F+ S S+ GIG IVRD +G   +   K    +  V  +E LAI
Sbjct: 82  KWELPPPGVFKLNVDGAFSSSGSVAGIGAIVRDSKGEVIMSAAKKECSAMIVVEVEALAI 141

Query: 68  RDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVSV 127
              L F     I  L   ++ESD+  V+   ++     + F N+I + +  M+   +  V
Sbjct: 142 IRGLQFCIHLGISNL---VIESDSQLVVTEFNQQGPSKATFGNVIREAKDLMSRFSICDV 201

Query: 128 SHCGRRCNRAADLLAKLDGSDSVCHIYPPYPVEDCISFWKGILPPVVGSMVEMD 182
            H  R CN AA LLAK   S           V++ +S W G  P V+ +++  D
Sbjct: 202 QHTYRNCNVAAHLLAKYGLS-----------VQN-VSLWWGAYPGVISNVLWYD 240

BLAST of Sed0010617 vs. NCBI nr
Match: XP_030509282.1 (uncharacterized protein LOC115723963 [Cannabis sativa])

HSP 1 Score: 84.7 bits (208), Expect = 9.2e-13
Identity = 60/182 (32.97%), Postives = 89/182 (48.90%), Query Frame = 0

Query: 1   MKIVVEEKWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVK 60
           ++  ++  W  PP G  KLN DA  + +++  G+G I+RD  G+      K    S    
Sbjct: 77  LESAIKVPWKPPPSGVIKLNVDAVVDRNTNTTGLGAILRDHSGLVIAAFSKKLLGSFDPH 136

Query: 61  VLEGLAIRDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMA 120
            +E LA+   + F      Q L   L+E+DAL V  AI   ++  S FN+II+D+   ++
Sbjct: 137 EMEALALFHGVHFALNYQFQHL---LIETDALRVKNAICSPTVAFSVFNDIIMDVSSLLS 196

Query: 121 ALGMVSVSHCGRRCNRAADLLAKLD-GSDSVCHIYPPYPVEDCISFWKGILPPVVGSMVE 180
              +V+VSH  R  N AAD LAK   G D           EDC  FW   +PP + S++ 
Sbjct: 197 FFPIVNVSHVKRTANMAADGLAKFALGVD-----------EDC--FWSDCIPPPINSVIV 242

Query: 181 MD 182
            D
Sbjct: 257 ND 242

BLAST of Sed0010617 vs. NCBI nr
Match: XP_010676027.1 (PREDICTED: uncharacterized protein LOC104891937 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-12
Identity = 56/167 (33.53%), Postives = 86/167 (51.50%), Query Frame = 0

Query: 9    WIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLAIR 68
            W  PP+  +KLN D S   SS+   +G+++R+  G   + G K+   S+SV   E  A++
Sbjct: 1098 WSPPPQNYFKLNFDGS-KLSSNSTALGFVIRNVAGEAMVAGSKSLGYSTSVLQAEAWALK 1157

Query: 69   DALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVSVS 128
            + +      +I  L   ++E D L VI AI +      E NNI++DIR  +   G   V 
Sbjct: 1158 EGILAALSFNISNL---IIEGDNLAVINAIRKIWKIPWEINNIVLDIRANLPLFGSFQVQ 1217

Query: 129  HCGRRCNRAADLLA-KLDGSDSVCHIYPPYPVEDCISFWKGIL--PP 173
            HC R  N+ ADLLA +  G D +   YPP+ ++  +   K +L  PP
Sbjct: 1218 HCFREANKVADLLANRGHGLDGMQLFYPPFDIDLSMCVRKDVLGWPP 1260

BLAST of Sed0010617 vs. NCBI nr
Match: XP_018821989.1 (uncharacterized protein LOC108992010 [Juglans regia] >KAF5454504.1 hypothetical protein F2P56_024162 [Juglans regia])

HSP 1 Score: 82.4 bits (202), Expect = 4.5e-12
Identity = 54/175 (30.86%), Postives = 78/175 (44.57%), Query Frame = 0

Query: 7   EKWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLA 66
           ++W APP G +KLN D +F+   S+ GIG ++RD +G   +        S +V  LEGLA
Sbjct: 612 DRWKAPPPGTFKLNVDGAFSQDGSVTGIGAVLRDSKGEVLMAAAIRERASLNVYELEGLA 671

Query: 67  IRDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVS 126
           I   L       I  L    +ESD+L V+     +    +   N+I ++R  M       
Sbjct: 672 ILRGLQLCLHLGIYHLS---IESDSLLVVNEFDRNGQSMATMGNVISEVRKLMFCFQTCE 731

Query: 127 VSHCGRRCNRAADLLAKLDGSDSVCHIYPPYPVEDCISFWKGILPPVVGSMVEMD 182
           ++H  R CN     LAKL  S S             IS W G  P V+ + +  D
Sbjct: 732 LTHVNRSCNIVTHTLAKLGLSVSE------------ISLWWGSYPGVITNFLWYD 771

BLAST of Sed0010617 vs. NCBI nr
Match: XP_030940021.1 (uncharacterized protein LOC115964936 [Quercus lobata])

HSP 1 Score: 81.6 bits (200), Expect = 7.8e-12
Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = 0

Query: 8   KWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLAI 67
           KW APP G +K+N D + +       IG I+RD +G P     K      SV++ E LA+
Sbjct: 175 KWSAPPAGFFKINVDGAASDDGKPSSIGVIIRDCQGSPTAASSKVLSSPFSVEITEALAL 234

Query: 68  RDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVSV 127
           ++ +    E     L  ++ E DAL +I+A++E ++  S+F +II +IR    +      
Sbjct: 235 QEGVLLASEMG---LSKVIFEGDALPIIQAVNEGNVG-SDFGHIIQNIRDLSLSFSWCLF 294

Query: 128 SHCGRRCNRAADLLAKLDGSDSVCHIYPPYPVEDCISFWKGILPPVVGSMV 179
            H  R  NR A  LAK      V  +            WKG++P VV  ++
Sbjct: 295 QHLNRNGNRVAHDLAKEARRSGVSQV------------WKGVVPSVVEILI 329

BLAST of Sed0010617 vs. ExPASy TrEMBL
Match: A0A803QC75 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-12
Identity = 54/167 (32.34%), Postives = 84/167 (50.30%), Query Frame = 0

Query: 7    EKWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLA 66
            ++W  P    +KLN DA+ +    + GIG I+RD  G       K +    S   +E +A
Sbjct: 1540 QQWRPPEANSYKLNVDAAIDVHQKVIGIGAIIRDSNGNVVAAYSKQQPGHFSSHEMEAIA 1599

Query: 67   IRDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVS 126
            +  +L+++ +   Q LP  LVESDAL V+ A+       S F+++I+D+   ++ L  V+
Sbjct: 1600 LFQSLNWVIQ---QQLPISLVESDALMVVNALRAPFNSISSFHDLIVDVLCLLSFLPDVT 1659

Query: 127  VSHCGRRCNRAADLLAKLD-GSDSVCH--------IYPPYPVEDCIS 165
            ++H  R  N AA  LAK   G D  C         IY    VE+C+S
Sbjct: 1660 ITHVKREANMAAHCLAKFALGVDEACSWFEEIPPPIYSVIRVENCLS 1703

BLAST of Sed0010617 vs. ExPASy TrEMBL
Match: A0A803PS58 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.8e-12
Identity = 55/177 (31.07%), Postives = 87/177 (49.15%), Query Frame = 0

Query: 9    WIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRG------VPKIVGWKARHKSSSVKVL 68
            W  PP G  KLN DA+ + S  I G+G ++R   G         ++G  A H+      +
Sbjct: 1110 WTPPPPGLLKLNVDAAVDSSRKITGVGALIRRTDGSVAAAFSKPVLGCFASHE------M 1169

Query: 69   EGLAIRDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAAL 128
            E +A+  +LS+  +     LP  L+E+DAL+V+ A+ + S   S F ++++DI   ++  
Sbjct: 1170 EAIAMFHSLSWALQLH---LPVTLIETDALKVVNALCKSSSAISSFQDLVVDISSLLSFF 1229

Query: 129  GMVSVSHCGRRCNRAADLLAKLD-GSDSVCHIYPPYPVEDCISFWKGILPPVVGSMV 179
              V+VSH  R  N AAD LAK   G D  C             +W   +PP + S++
Sbjct: 1230 PNVNVSHVKRAANVAADGLAKFTLGVDEAC-------------YWTDCIPPPINSVI 1264

BLAST of Sed0010617 vs. ExPASy TrEMBL
Match: A0A803PJK4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.8e-12
Identity = 49/139 (35.25%), Postives = 75/139 (53.96%), Query Frame = 0

Query: 5    VEEKWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEG 64
            V  KW+ PP G  KLNTDA+ +  + I G G I+RD  G       K        +V+E 
Sbjct: 1676 VAPKWLNPPSGRLKLNTDAAVDNVNRISGFGAILRDSDGQVVAAMSKPHPGCFKPEVMEA 1735

Query: 65   LAIRDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGM 124
            LA+R +L ++   +   LP   +E+D+L V+K +   SL+ S+F++++ DI   M+    
Sbjct: 1736 LALRYSLQWLQSMN---LPIHYIETDSLLVVKGLQARSLNVSDFHSVLNDITILMSNFPG 1795

Query: 125  VSVSHCGRRCNRAADLLAK 144
            V +SH  R  N  A +LAK
Sbjct: 1796 VQISHVFRSANTFAHILAK 1811

BLAST of Sed0010617 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.4e-12
Identity = 50/146 (34.25%), Postives = 75/146 (51.37%), Query Frame = 0

Query: 9   WIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLAIR 68
           W  PP G  K+N DA+++     GG+GW++RD  G+    G +     SS  ++E LAIR
Sbjct: 796 WCKPPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIR 855

Query: 69  DALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVSVS 128
            ALS   E     L  I+VESD+ + I  ++  +   S+   I+ DIR  +A+L  VS  
Sbjct: 856 HALS---ECANFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFV 915

Query: 129 HCGRRCNRAADLLAKLDGSDSVCHIY 155
              R CN+AA  +A         H++
Sbjct: 916 FAPRSCNQAAHSVAGFVSKQGGNHVW 938

BLAST of Sed0010617 vs. ExPASy TrEMBL
Match: A0A803QG78 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.4e-12
Identity = 56/180 (31.11%), Postives = 85/180 (47.22%), Query Frame = 0

Query: 9    WIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGV------PKIVGWKARHKSSSVKVL 68
            W  PP    KLN DA+ + S+ + G+G + RD  G+       K++G    H+  ++ + 
Sbjct: 1160 WKTPPSCVVKLNIDAAVDRSTKVTGLGAVFRDSMGMVVAAFSKKLLGSFEPHEMEALALF 1219

Query: 69   EGLAIRDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAAL 128
             G         +H A     P + +E+DAL V  A+   +  CS FN+II+D+   ++  
Sbjct: 1220 HG---------VHYALHFQFPQLQIETDALRVKNALYIPTAACSTFNDIIMDVSSLLSFF 1279

Query: 129  GMVSVSHCGRRCNRAADLLAKLD-GSDSVCHIYPPYPVEDCISFWKGILPPVVGSMVEMD 182
              V+VSH  R  N AA  LAK   G D           EDC  FW   +PP + S++  D
Sbjct: 1280 PNVNVSHVKRTANTAAHGLAKFALGVD-----------EDC--FWSDCIPPPINSVIVND 1317

BLAST of Sed0010617 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-06
Identity = 37/136 (27.21%), Postives = 65/136 (47.79%), Query Frame = 0

Query: 8   KWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLAI 67
           +W  PP    K NTDA++N  +   GIGW++R+ +G  K +G +A  K  SV   E  A+
Sbjct: 419 RWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAM 478

Query: 68  RDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVSV 127
           R A+  +          ++ ESD+  +I+ ++ D +        I D++  ++    V  
Sbjct: 479 RWAVLSLSRFQYNY---VIFESDSQVLIEILNNDEI-WPSLKPTIQDLQRLLSQFTEVKF 538

Query: 128 SHCGRRCNRAADLLAK 144
               R  N  A+ +A+
Sbjct: 539 VFIPREGNTLAERVAR 550

BLAST of Sed0010617 vs. TAIR 10
Match: AT2G04420.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 6.8e-06
Identity = 39/148 (26.35%), Postives = 59/148 (39.86%), Query Frame = 0

Query: 7   EKWIAPPRGCWKLNTDASFNFSSSIGGIGWIVRDGRGVPKIVGWKARHKSSSVKVLEGLA 66
           +KW  PP G  K N D SFN+ +     GW++RD +G  K          ++    E  A
Sbjct: 61  QKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTMNNALESELQA 120

Query: 67  IRDALSFIHEADIQMLPPILVESDALEVIKAISEDSLDCSEFNNIIIDIRWFMAALGMVS 126
           +  A+        Q    ++ E D+ +V + ++   +    FN I     W       V 
Sbjct: 121 LVMAMQHTWS---QGYRKVIFEGDSKQVEELLNRKQMHFGAFNWIREAWSW-SKRFEEVI 180

Query: 127 VSHCGRRCNRAADLLAKLDGSDSVCHIY 155
            S   R  N+ AD+LAK         IY
Sbjct: 181 FSWTPRTNNQPADMLAKSHLPQDTSFIY 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_042983291.19.2e-1332.76uncharacterized protein LOC122312694 [Carya illinoinensis][more]
XP_030509282.19.2e-1332.97uncharacterized protein LOC115723963 [Cannabis sativa][more]
XP_010676027.11.6e-1233.53PREDICTED: uncharacterized protein LOC104891937 [Beta vulgaris subsp. vulgaris][more]
XP_018821989.14.5e-1230.86uncharacterized protein LOC108992010 [Juglans regia] >KAF5454504.1 hypothetical ... [more]
XP_030940021.17.8e-1230.41uncharacterized protein LOC115964936 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A803QC751.3e-1232.34Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PS583.8e-1231.07Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PJK43.8e-1235.25Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J5WPU66.4e-1234.25Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... [more]
A0A803QG788.4e-1231.11Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.11.0e-0627.21Ribonuclease H-like superfamily protein [more]
AT2G04420.16.8e-0626.35Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 15..145
e-value: 5.7E-12
score: 47.8
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 20..143
e-value: 5.5E-19
score: 68.2
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 6..150
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 6..150
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 19..143
e-value: 4.15667E-20
score: 79.2804
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0010617.1Sed0010617.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity