Sed0010584 (gene) Chayote v1

Overview


Name	Sed0010584
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Zinc finger CCHC domain-containing protein 9
Location	LG07: 7522989 .. 7526958 (+)
RNA-Seq Expression	Sed0010584
Synteny	Sed0010584

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAAAGAAACCGACGTGTAGTTCAAATCCAGTCGCGTAAACCTCGCCGTCACTCCGTTCGTTCAGAAACCCTCTTGAGGATTTCGCCGTCGCCGTCGCCGTCGCAGTCCGATCTCGAAGGACTGGTTTTCCGGCGAAGATGGTGAGCAAAAGGCAAAAGCTTGCCCGGAAAAGGTACAGAGCAGAAAACCCTGAACTGTTTCCGAAAGCAGAGCCAACGCCACCAAAAGACCCCGACAAGAAGAAGAAGAAGAAGATGAAGAAGGAGGGTAAATTCAAGCGCAAAAAGGGAGAATCAAATTCAAATAATCCCCAGAAAAAGGGTTTTAAGAAACACCCTCTTCGAGTTCCTGGGATGAAGCCTGGAGAAAGCTGCTACATCTGCAAAGCTAAAGAACACATTGCCAAGTTTTGCCCTGAAAAGGCTCAATGGGACAAGAACAAGGTCTTTTGTTTTACCTTTCGAGTTTCTATTGAAATTTTGCTCATAGACATGTATTATTTTTTTGAAACTGGAAATCGGAGCTTCGCTCCTTTATACCCTACAGCACTCGGGATTGTTTGAAGGCTTGGGCCCAAGAGAAGAAGAGATTTTACGATTAATCTAACTCGCGGGTCTCAAATTTTAGATGTCTAAAGAAGTATGCCTGAAAGCCCAAGTTACCAATGGGACTGGCCCTTAAGACCATAGACATGGTATTATTAGGAATGTGGTATTTATGAAATAGGTTATGCCAATGCTTAGGTTACTTCCATCAATTATGATCACTTTGCGCGCCAAAGAGTATTACTATAGTGTCATTTTGTGCAACCTAGTAATTAAGAGGTTACGAGTTTGAATCCTCCATTATAAATGTTGTTGAATTAAAAAAAAAAATTATGGCCATTTTGTAAATAGATTGTTAGAGTTCATGGGTCAAGAGTAACATAGACTATTTGGAAGAGCTCTGTAGTGATAATCTTTTGGGAAACTGAGAGGATTGAGATCAAAGAATTTTAAGGCAAACATGGTGACATGCCTTCAAAATGGGGATCTCTTTGAAGTTTTCTTATGATGTGGTGGGCTTGTTTGGTCTTCTTCCTTTGGTTCTTTCAGTCTCCAATTTACTTTTGAGTGTGGTTGGATATCCAGTGTTTTTCCCTTTATCTTTTAATAGCATTTAAGGTTATTTCTATCTGTCGATGACTCAATAGCTCAAGATAATTATCTCCAAGGCGTGGCACAATGGTTGAAACTTGGGCTTTGAAGGTGTGCTCTTCTCAAGGTTTCAGGTTTGAGATTCACTTGTGACATTTATTTGTAGACACCTCTCGTGACTTCATTCCTTCGATGTCTCCCGGTGCCTGGCCTAGAGATGGGCCTGGTTACCCTAAATATAGTGGAGTGGAACTTCGATTTCTCGGTTTTAAAAAATAATAGCTATTTGGGATTTCAGTTCCACCTTGATTTAACTTATCAATTTCTGTAAGTTAAAAGAAAATGTGCTGTCTTTTTTTAGTTATATTATATGGCTTTTTATTCGAAGTTAATGCCTTACTGGACGATTGTAATTTATACCAAATTGTTTGAGTGATCGTGTCATTGTAATGGGAGTCTTAGTCTTATATCTGGTAATTCTATTTCTGTTATTTGGTATCCACAGATATGCTTGCTTTGCCGGAGACGAGGGCACAGCCTAAAAAATTGCCCCGAAAAAAATGATGCAACGGTGGAAAAGAAGCTATGCTATAATTGTGGGGAAACAGGACATTCACTGGCTAGTTGTCCGCAGCCTCTTGAAGATGGTAAATTTTGTTACAATTCAATCTCATATTTATTGGTGCTAGCCATCACGGGTTGACCTAGTGGTCAAATAAGGGCCTTAAGAATCCATGGTGGCTGGTCACCTACCTCGAAATTAATTTTAATGGATTTTCTTAACAACCAAATGTAATAGAGTTAGCCAGTTATCTTGTGAGAATAGTTAGGTGTGTGTAAATTGGTTGGGACACTCAGAGATATAATAAAACAAAAAAATATTTATTATTGCCTTGCGTATTGTGTAGAATAATCCTTGTAGCACTTGTACTAAAATTTTTCAAATCAAGTGACTTTCATAAATCATATATTCTTATGAAATGAAATGTTTTTGAAATAGCTCTGGAGTTCTTAAGGGTTCTCCCCATCCGGATGTGTTGCGGATTCTTGCCAATGCCGTCCCCCCTTAGGGCTAAAAGTTGCAAGTTCTAGAAAGAATCAATTTATATTTACTATATTATCTCATTTCATAATAGGCTCAAAACCTTGTAACACTTTCATCCCTATCAATAAACATGTTTTTTTTTTTTTTCCATTTTGGATATGTAGGAGGAACGAAATTCGCCAGTTGTTTTATTTGTAATGAAACCGGACACTTAAGCAAGAACTGCCCAAAGAATACTCACGGGATCTACCCTAAGGTATTTGGTTAACCTTCAAACTCTTGACTTCACTGTAATTAACTCTACTCGTTGTCCCTTAGTTTCCTTTTGTCAAACAACTTCAAGAATTTTCTTATATGATAATCTGCAGGGTGGTTGTTGTAAAATTTGTGGCGAAGTGACACATTTAGCTAAGGATTGTCCAAATAAAAGCACCCATGTTTATGCTGGTGCTGGTGTATCTGGTTACAGATGTAAGTTTTCATGTTTCTGTTTTGTTTGTCTTTTAAAGAAGGAAAGTTCTCAAATTGTTTCTAGTTTGTCATTTTTGTGTGCAAGCTGTTGTGACATGTTTGTTGTTACAAACAATCTAAAATTATATTTATTTAACTTAGGCTAAAAGAAGTGGAGCCTATGTTTCAGTTATTTGATTTATTCACTTGAGCTATAGTTTTGTTTAACCCACATGCTACGTGATAACTGATAGGATGATATCTGCATTCATTTTCTAGGATTTTTCTGGTGGTCTTTACAACCATATTGTTGATTAAAATTGATGCTTTTTAAATCTTTCAAACGCATTTCTAACCGGCCAAAATACTTACAGGTTTTCAACCATCATGGCCTAGTGGTCAAGAAGGGCTTTAAGTAACTAAGACATGATGGATTTAATCCATGGAATTAATTTCCTACGAGTTTTCTTAATATCCAAATGTTACAGGGTCATATGGTATGTTTCGTGAGAATAGTCAAAGTGTGCGTAAGCTGGTTTAGTTACTCACAAATTAAAAAAAAAACAAAATACTTCAAAGTTTTACATCAATGCTTGTTTTCATATCAAGTAGCGGTTTCAGATATCTCAAACACAGAAAAGAAAAATCTCTCATGTTTCTCTAATAAGTACTACTGGAGAAAAGTTGTCCTGAAAAATACTCTACTCCAAAATCACTCTCAATAGTGATTTTGTGAACGGATCAAAGTTGGATAGATAATTGGGAATGAGGAACCAAACCAAGTTCTCTGCATTGATAAACATCTGCTTAAGATTGTTTCTTATTTGATGTATCTTTCTTTTATAATATATCTGCAAAAGCTTGAATGAAACATACTGTTACAAGTAATGATTTGTTATCTTTTTGTCTCAGCATCGGGATATATGGAAACGTCGAGGCGACCAGAAACAAGGCTTGTCAGTGGTGACGATCTGGCCGATGATTTCATGATCGATGAAGATCAGATGCAGATGAAAGATGCAAAACCGGAAAAGAGAAAAGGACCTAAAGTTGTTAAGTTCATGGATTGATAGCTCTATGAGAAAAGATTTTCTCTTGTGTTTGTTGTAATGACCCTTTCTTTTACACAAGAGAATACTGGGTAGTTTTGGAACATCACCCATCTATGACTTTTTTTCCCTCAAAGTATTTTTCTCTTTAATGTTATAATATTTTTAAATCAATGTTTTAGAGTTGTACAATGAGTTTTACCACCATATGCATTAGGAGTTTCTTTTTTTCTTTGCTTCTTTATTTAGAAATGAAATTAGGTTTGTAGTGTTTGCATAGTTAGCTAG

mRNA sequence

GACAAAGAAACCGACGTGTAGTTCAAATCCAGTCGCGTAAACCTCGCCGTCACTCCGTTCGTTCAGAAACCCTCTTGAGGATTTCGCCGTCGCCGTCGCCGTCGCAGTCCGATCTCGAAGGACTGGTTTTCCGGCGAAGATGGTGAGCAAAAGGCAAAAGCTTGCCCGGAAAAGGTACAGAGCAGAAAACCCTGAACTGTTTCCGAAAGCAGAGCCAACGCCACCAAAAGACCCCGACAAGAAGAAGAAGAAGAAGATGAAGAAGGAGGGTAAATTCAAGCGCAAAAAGGGAGAATCAAATTCAAATAATCCCCAGAAAAAGGGTTTTAAGAAACACCCTCTTCGAGTTCCTGGGATGAAGCCTGGAGAAAGCTGCTACATCTGCAAAGCTAAAGAACACATTGCCAAGTTTTGCCCTGAAAAGGCTCAATGGGACAAGAACAAGATATGCTTGCTTTGCCGGAGACGAGGGCACAGCCTAAAAAATTGCCCCGAAAAAAATGATGCAACGGTGGAAAAGAAGCTATGCTATAATTGTGGGGAAACAGGACATTCACTGGCTAGTTGTCCGCAGCCTCTTGAAGATGGAGGAACGAAATTCGCCAGTTGTTTTATTTGTAATGAAACCGGACACTTAAGCAAGAACTGCCCAAAGAATACTCACGGGATCTACCCTAAGGGTGGTTGTTGTAAAATTTGTGGCGAAGTGACACATTTAGCTAAGGATTGTCCAAATAAAAGCACCCATGTTTATGCTGGTGCTGGTGTATCTGGTTACAGATCATCGGGATATATGGAAACGTCGAGGCGACCAGAAACAAGGCTTGTCAGTGGTGACGATCTGGCCGATGATTTCATGATCGATGAAGATCAGATGCAGATGAAAGATGCAAAACCGGAAAAGAGAAAAGGACCTAAAGTTGTTAAGTTCATGGATTGATAGCTCTATGAGAAAAGATTTTCTCTTGTGTTTGTTGTAATGACCCTTTCTTTTACACAAGAGAATACTGGGTAGTTTTGGAACATCACCCATCTATGACTTTTTTTCCCTCAAAGTATTTTTCTCTTTAATGTTATAATATTTTTAAATCAATGTTTTAGAGTTGTACAATGAGTTTTACCACCATATGCATTAGGAGTTTCTTTTTTTCTTTGCTTCTTTATTTAGAAATGAAATTAGGTTTGTAGTGTTTGCATAGTTAGCTAG

Coding sequence (CDS)

ATGGTGAGCAAAAGGCAAAAGCTTGCCCGGAAAAGGTACAGAGCAGAAAACCCTGAACTGTTTCCGAAAGCAGAGCCAACGCCACCAAAAGACCCCGACAAGAAGAAGAAGAAGAAGATGAAGAAGGAGGGTAAATTCAAGCGCAAAAAGGGAGAATCAAATTCAAATAATCCCCAGAAAAAGGGTTTTAAGAAACACCCTCTTCGAGTTCCTGGGATGAAGCCTGGAGAAAGCTGCTACATCTGCAAAGCTAAAGAACACATTGCCAAGTTTTGCCCTGAAAAGGCTCAATGGGACAAGAACAAGATATGCTTGCTTTGCCGGAGACGAGGGCACAGCCTAAAAAATTGCCCCGAAAAAAATGATGCAACGGTGGAAAAGAAGCTATGCTATAATTGTGGGGAAACAGGACATTCACTGGCTAGTTGTCCGCAGCCTCTTGAAGATGGAGGAACGAAATTCGCCAGTTGTTTTATTTGTAATGAAACCGGACACTTAAGCAAGAACTGCCCAAAGAATACTCACGGGATCTACCCTAAGGGTGGTTGTTGTAAAATTTGTGGCGAAGTGACACATTTAGCTAAGGATTGTCCAAATAAAAGCACCCATGTTTATGCTGGTGCTGGTGTATCTGGTTACAGATCATCGGGATATATGGAAACGTCGAGGCGACCAGAAACAAGGCTTGTCAGTGGTGACGATCTGGCCGATGATTTCATGATCGATGAAGATCAGATGCAGATGAAAGATGCAAAACCGGAAAAGAGAAAAGGACCTAAAGTTGTTAAGTTCATGGATTGA

Protein sequence

MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNSNNPQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKNCPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHGIYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLADDFMIDEDQMQMKDAKPEKRKGPKVVKFMD

Homology

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BLAST of Sed0010584 vs. NCBI nr
Match: XP_022945772.1 (uncharacterized protein LOC111449917 [Cucurbita moschata])

HSP 1 Score: 461.8 bits (1187), Expect = 3.9e-126
Identity = 220/270 (81.48%), Postives = 246/270 (91.11%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNSNN--- 60
           MVS+RQKLARK+YR E+PELFPKAEPTPPKDP+KKK+KK KK+ +FKRKKGES+S N   
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKK-KKKSEFKRKKGESDSRNDPI 60

Query: 61  -PQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKN 120
            P KKGFKKHPLRVPGMKPGESC+ICKAK+HIAKFCPEKAQW+KNKICLLCRRRGHSLKN
Sbjct: 61  KPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKN 120

Query: 121 CPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHG 180
           CP+K + TV+KKLCYNCGETGHSLA+CPQPL+ GGTKFA+CFICNE+GHLSKNCPKNTHG
Sbjct: 121 CPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHG 180

Query: 181 IYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLA 240
           IYPKGGCCK CGEVTHLAKDCP K T V+AG G SG RSSGY+E SRRPET+LVSGDDL 
Sbjct: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVFAGPGASGNRSSGYVEMSRRPETKLVSGDDLE 240

Query: 241 DDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           DDFM++ED +Q+KDAK  K+KGPKVVKFMD
Sbjct: 241 DDFMVEEDNLQIKDAKLGKKKGPKVVKFMD 269

[Close]

BLAST of Sed0010584 vs. NCBI nr
Match: XP_023542027.1 (uncharacterized protein LOC111802000 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125
Identity = 221/270 (81.85%), Postives = 243/270 (90.00%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNS----N 60
           MVS+RQKLARK+YR E+PELFPKAEPTPPKDP+KKKKKK K E  FKRKKGES+S    N
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSE--FKRKKGESDSRNDPN 60

Query: 61  NPQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKN 120
            P KKGFKKHPLRVPGMKPGESC+ICKAK+HIAKFCPEKAQW+KNKICLLCRRRGHSLKN
Sbjct: 61  KPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKN 120

Query: 121 CPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHG 180
           CP+K + TV+KKLCYNCGETGHSLA+CPQPL+ GGTKFA+CFICNE+GHLSKNCPKNTHG
Sbjct: 121 CPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHG 180

Query: 181 IYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLA 240
           IYPKGGCCK CGEVTHLAKDCP K T VYAG GVS  RSSGY+E SRRPET+LVSGDDL 
Sbjct: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLE 240

Query: 241 DDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           DDFM++ED +Q+KDAK  K+K PKVVKFMD
Sbjct: 241 DDFMVEEDNLQIKDAKLGKKKCPKVVKFMD 268

[Close]

BLAST of Sed0010584 vs. NCBI nr
Match: XP_022967999.1 (uncharacterized protein LOC111467373 [Cucurbita maxima])

HSP 1 Score: 457.2 bits (1175), Expect = 9.6e-125
Identity = 218/270 (80.74%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNS----N 60
           MVS+RQKLARK+YR E+PELFPKAEPTPPKDP+KKKKK      +FKRKKGES+S    N
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKK-----SEFKRKKGESDSRNDPN 60

Query: 61  NPQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKN 120
            P KKGFKKHPLRVPGMKPGESC+ICKAK+HIAKFCPEKAQW+KNKICLLCRRRGHSLKN
Sbjct: 61  KPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKN 120

Query: 121 CPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHG 180
           CP+K + TV+KKLCYNCGETGHSLA+CPQPL+ GGTK+A+CFICNE+GHLSKNCPKNTHG
Sbjct: 121 CPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHG 180

Query: 181 IYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLA 240
           IYPKGGCCK CGEVTHLAKDCP K T VYAG GVS  RSSGY+E SRRPETRLVSGDDL 
Sbjct: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETRLVSGDDLE 240

Query: 241 DDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           DDFM++ED +Q+KDAK   +KGPKVVKFMD
Sbjct: 241 DDFMVEEDNLQIKDAKLGNKKGPKVVKFMD 265

[Close]

BLAST of Sed0010584 vs. NCBI nr
Match: XP_031738808.1 (zinc finger CCHC domain-containing protein 9 [Cucumis sativus] >KGN57377.1 hypothetical protein Csa_010226 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 2.8e-124
Identity = 217/270 (80.37%), Postives = 239/270 (88.52%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNSN---- 60
           MV++RQ+LARK+Y+ E+PELFPKAEPTPPKDPDKKKKK      KFKRKK ESNSN    
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKK-----SKFKRKKEESNSNRDPT 60

Query: 61  NPQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKN 120
            P KKGFKKHPLRVPGMKPGESC+ICKA +HIAK CPEKAQW+KNKICLLCRRRGHSLKN
Sbjct: 61  KPHKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKN 120

Query: 121 CPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHG 180
           CP+KN+ TV+KKLCYNCGETGHSLA+CPQPL+DGGTKFASCFICNE+GHLSKNCPKNTHG
Sbjct: 121 CPDKNEGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHG 180

Query: 181 IYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLA 240
           IYPKGGCCK CGEVTHLAKDCP K T V+  AGV GYRSSGY+E  RRPET+L+SGDDL 
Sbjct: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLE 240

Query: 241 DDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           DDFMIDE  +Q+KDAK  K+KGPKVVKFMD
Sbjct: 241 DDFMIDEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]

BLAST of Sed0010584 vs. NCBI nr
Match: KAG6574179.1 (hypothetical protein SDJN03_28066, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 455.3 bits (1170), Expect = 3.6e-124
Identity = 217/270 (80.37%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNS----N 60
           MVS+RQKLARK+YR E+PELFPKAEPTPPKDP+KKKKKK       KRKKGES+S    N
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKK-------KRKKGESDSRNDPN 60

Query: 61  NPQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKN 120
            P +KGFKKHPLRVPGMKPGESC+ICKAK+HIAKFCPEKAQW+KNKICLLCRRRGHSLKN
Sbjct: 61  KPHRKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKN 120

Query: 121 CPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHG 180
           CP+K + TV+KKLCYNCGETGHSLA+CPQPL+ GGT+FA+CFICNE+GHLSKNCPKNTHG
Sbjct: 121 CPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTRFANCFICNESGHLSKNCPKNTHG 180

Query: 181 IYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLA 240
           IYPKGGCCK CGEVTHLAKDCP K T V+AG G SG RSSGY+E SRRPETRLVSGDDL 
Sbjct: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVFAGPGASGNRSSGYVEMSRRPETRLVSGDDLE 240

Query: 241 DDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           DDFM++ED +Q+KDAK  K+KGPKVVKFMD
Sbjct: 241 DDFMVEEDNLQIKDAKLGKKKGPKVVKFMD 263

[Close]

BLAST of Sed0010584 vs. ExPASy Swiss-Prot
Match: Q9HFF2 (Uncharacterized protein C683.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC683.02c PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.7e-26
Identity = 59/133 (44.36%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 97  QWDKNKICLLCRRRGHSLKNCPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFAS 156
           Q +++K C  CR++GH +++CPE  D      +C+ CG   HSL +C    + G  KFA 
Sbjct: 72  QRNRDKFCFACRQQGHIVQDCPEAKD---NVSICFRCGSKEHSLNACS---KKGPLKFAK 131

Query: 157 CFICNETGHLSKNCPKNTHGIYPKGGCCKICGEVTHLAKDCP--NKST----HVYAGAGV 216
           CFIC+E GHLS  C +N  G+YPKGGCCK C  V HLAKDC   NK      HV   AG 
Sbjct: 132 CFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQVNKDDVSFGHVVGVAGT 191

Query: 217 SGYRSSGYMETSR 224
           +G     Y E ++
Sbjct: 192 TGADEDVYHEYAK 198

[Close]

BLAST of Sed0010584 vs. ExPASy Swiss-Prot
Match: Q8N567 (Zinc finger CCHC domain-containing protein 9 OS=Homo sapiens OX=9606 GN=ZCCHC9 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 5.4e-22
Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 103 ICLLCRRRGHSLKNCPEK-NDATVEKKLCYNCGETGHSLASCPQPLED--GGTKFASCFI 162
           +C  CR+ GH + +CP    +  +   +CY CG T H +  C   ++   G   FA CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188

Query: 163 CNETGHLSKNCPKNTHGIYPKGGCCKICGEVTHLAKDCP---NKSTHVYAGAGVSGYRSS 222
           C E GHLS++CP N  G+Y  GG CK+CG V HL KDCP   N    V  G    G  S+
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTVGRWAKG-MSA 248

Query: 223 GYME-----TSRRPETRL 230
            Y E       ++P+T++
Sbjct: 249 DYEEILDVPKPQKPKTKI 265

[Close]

BLAST of Sed0010584 vs. ExPASy Swiss-Prot
Match: Q8R1J3 (Zinc finger CCHC domain-containing protein 9 OS=Mus musculus OX=10090 GN=Zcchc9 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 4.6e-21
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 103 ICLLCRRRGHSLKNCPEKNDA-TVEKKLCYNCGETGHSLASCPQPLED--GGTKFASCFI 162
           +C  CR+ GH + +CP   ++  +   +CY CG T H ++ C   ++   G   FA CF+
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFAKCFV 188

Query: 163 CNETGHLSKNCPKNTHGIYPKGGCCKICGEVTHLAKDC 198
           C E GHLS++CP NT G+Y  GG CK+CG V H  KDC
Sbjct: 189 CGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDC 226

[Close]

BLAST of Sed0010584 vs. ExPASy Swiss-Prot
Match: Q8T8R1 (CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster OX=7227 GN=CG3800 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.3e-19
Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 77  ESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKNCPEKNDATVEKKLCYNCGET 136
           E CY C    H A+ CPE+A+      C  C   GH  K+C + ++ T     CY C +T
Sbjct: 55  EKCYKCNQFGHFARACPEEAE-----RCYRCNGIGHISKDCTQADNPT-----CYRCNKT 114

Query: 137 GHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHGIYPKGGCCKICGEVTHLAKD 196
           GH + +CP+ + + G    SC+ CN TGH+SKNCP+ +         C  CG+  HL ++
Sbjct: 115 GHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSK-------TCYGCGKSGHLRRE 161

Query: 197 CPNK 201
           C  K
Sbjct: 175 CDEK 161

[Close]

BLAST of Sed0010584 vs. ExPASy Swiss-Prot
Match: Q04832 (DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.2e-18
Identity = 48/158 (30.38%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 71  PGMKPGESCYICKAKEHIAKFCPEKAQW--DKNKICLLCRRRGHSLKNCP-EKNDATVEK 130
           P  +   SC  C  + H A+ CPE      +++  C  C   GH  + CP E        
Sbjct: 10  PRTESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGA 69

Query: 131 KLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKN-------------- 190
             C+ CGE GH    CP   + G  K   C+ C + GHLS++CP +              
Sbjct: 70  MTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGR 129

Query: 191 --THGIYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAG 210
               G Y     C  CG+  H+++DCPN     Y+GAG
Sbjct: 130 SGAQGGYSGDRTCYKCGDAGHISRDCPN-GQGGYSGAG 166

[Close]

BLAST of Sed0010584 vs. ExPASy TrEMBL
Match: A0A6J1G1V2 (uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC111449917 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.9e-126
Identity = 220/270 (81.48%), Postives = 246/270 (91.11%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNSNN--- 60
           MVS+RQKLARK+YR E+PELFPKAEPTPPKDP+KKK+KK KK+ +FKRKKGES+S N   
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKK-KKKSEFKRKKGESDSRNDPI 60

Query: 61  -PQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKN 120
            P KKGFKKHPLRVPGMKPGESC+ICKAK+HIAKFCPEKAQW+KNKICLLCRRRGHSLKN
Sbjct: 61  KPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKN 120

Query: 121 CPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHG 180
           CP+K + TV+KKLCYNCGETGHSLA+CPQPL+ GGTKFA+CFICNE+GHLSKNCPKNTHG
Sbjct: 121 CPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHG 180

Query: 181 IYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLA 240
           IYPKGGCCK CGEVTHLAKDCP K T V+AG G SG RSSGY+E SRRPET+LVSGDDL 
Sbjct: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVFAGPGASGNRSSGYVEMSRRPETKLVSGDDLE 240

Query: 241 DDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           DDFM++ED +Q+KDAK  K+KGPKVVKFMD
Sbjct: 241 DDFMVEEDNLQIKDAKLGKKKGPKVVKFMD 269

[Close]

BLAST of Sed0010584 vs. ExPASy TrEMBL
Match: A0A6J1HYC2 (uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.6e-125
Identity = 218/270 (80.74%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNS----N 60
           MVS+RQKLARK+YR E+PELFPKAEPTPPKDP+KKKKK      +FKRKKGES+S    N
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKK-----SEFKRKKGESDSRNDPN 60

Query: 61  NPQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKN 120
            P KKGFKKHPLRVPGMKPGESC+ICKAK+HIAKFCPEKAQW+KNKICLLCRRRGHSLKN
Sbjct: 61  KPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKN 120

Query: 121 CPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHG 180
           CP+K + TV+KKLCYNCGETGHSLA+CPQPL+ GGTK+A+CFICNE+GHLSKNCPKNTHG
Sbjct: 121 CPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHG 180

Query: 181 IYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLA 240
           IYPKGGCCK CGEVTHLAKDCP K T VYAG GVS  RSSGY+E SRRPETRLVSGDDL 
Sbjct: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETRLVSGDDLE 240

Query: 241 DDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           DDFM++ED +Q+KDAK   +KGPKVVKFMD
Sbjct: 241 DDFMVEEDNLQIKDAKLGNKKGPKVVKFMD 265

[Close]

BLAST of Sed0010584 vs. ExPASy TrEMBL
Match: A0A0A0L9S9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182130 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124
Identity = 217/270 (80.37%), Postives = 239/270 (88.52%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNSN---- 60
           MV++RQ+LARK+Y+ E+PELFPKAEPTPPKDPDKKKKK      KFKRKK ESNSN    
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKK-----SKFKRKKEESNSNRDPT 60

Query: 61  NPQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKN 120
            P KKGFKKHPLRVPGMKPGESC+ICKA +HIAK CPEKAQW+KNKICLLCRRRGHSLKN
Sbjct: 61  KPHKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKN 120

Query: 121 CPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHG 180
           CP+KN+ TV+KKLCYNCGETGHSLA+CPQPL+DGGTKFASCFICNE+GHLSKNCPKNTHG
Sbjct: 121 CPDKNEGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHG 180

Query: 181 IYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLA 240
           IYPKGGCCK CGEVTHLAKDCP K T V+  AGV GYRSSGY+E  RRPET+L+SGDDL 
Sbjct: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLE 240

Query: 241 DDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           DDFMIDE  +Q+KDAK  K+KGPKVVKFMD
Sbjct: 241 DDFMIDEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]

BLAST of Sed0010584 vs. ExPASy TrEMBL
Match: A0A5D3DHA5 (Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00580 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.5e-123
Identity = 221/288 (76.74%), Postives = 242/288 (84.03%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNS----N 60
           MVS+RQ+LARK+YR  +PELFPKAEPTPPKDPDKKKK       KFKRKKGESNS    N
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPDKKKK------SKFKRKKGESNSNRDPN 60

Query: 61  NPQKKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNK-------------- 120
            P KKGFKKHPLRVPGMKPGESC+ICKAK+HIAK CPEKAQW+KNK              
Sbjct: 61  KPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKVCLSGLPFVLLEFH 120

Query: 121 ----ICLLCRRRGHSLKNCPEKNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCF 180
               ICLLCRRRGHSLKNCP+KN+ T++KKLCYNCGETGHSLA+CPQPL+DGGTKFASCF
Sbjct: 121 CLLDICLLCRRRGHSLKNCPDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCF 180

Query: 181 ICNETGHLSKNCPKNTHGIYPKGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGY 240
           ICNE+GHLSKNCPKNTHGIYPKGGCCK CGEVTHLAKDCP K T V+  AGVSGYRSSGY
Sbjct: 181 ICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVSGYRSSGY 240

Query: 241 METSRRPETRLVSGDDLADDFMIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           +E  RRPET+LVSGDDL DDFMIDED++Q+KDAK  K+KGPKVVKFMD
Sbjct: 241 VEMPRRPETKLVSGDDLEDDFMIDEDRLQIKDAKMGKKKGPKVVKFMD 282

[Close]

BLAST of Sed0010584 vs. ExPASy TrEMBL
Match: A0A6J1CI48 (uncharacterized protein LOC111011601 OS=Momordica charantia OX=3673 GN=LOC111011601 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.9e-123
Identity = 215/267 (80.52%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGES-NSNNPQ 60
           MVS+RQKLARK+Y+  +PELFPKAEPTPPKDP+KKKKKK     KFKR K ES + N P 
Sbjct: 1   MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKK----SKFKRNKAESKDPNKPF 60

Query: 61  KKGFKKHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKNCPE 120
           KKGFKKHPLRVPGMKPGESC+ICKAK+HIAK CPEKAQW+KNKICLLCRRRGHSLKNCP+
Sbjct: 61  KKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPD 120

Query: 121 KNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHGIYP 180
           K++ T +KKLCYNCG+TGHSLA+CPQPL+DGGTKFA+CFICNE+GHLSKNCPKNTHGIYP
Sbjct: 121 KSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYP 180

Query: 181 KGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLADDF 240
           KGGCCK CGEVTHLAKDCPNK T V A AG+SG RSSGYME  RRP TRLVSGDDL DDF
Sbjct: 181 KGGCCKTCGEVTHLAKDCPNKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDF 240

Query: 241 MIDEDQMQMKDAKPEKRKGPKVVKFMD 267
           MIDED +Q+ DAKP K+KGPKVVKF+D
Sbjct: 241 MIDEDHLQINDAKPGKKKGPKVVKFLD 263

[Close]

BLAST of Sed0010584 vs. TAIR 10
Match: AT5G52380.1 (VASCULAR-RELATED NAC-DOMAIN 6 )

HSP 1 Score: 323.9 bits (829), Expect = 1.2e-88
Identity = 161/276 (58.33%), Postives = 200/276 (72.46%), Query Frame = 0


Query: 1   MVSKRQKLARKRYRAENPELFPKAEPTPPKDPDKKKKKKMKKEGKFKRKKGESNSNNPQK 60
           MV++R++LA+KRY+  NPELFPKAEPTPPKDP+KKKKKK      FK+KK  S+++ PQ+
Sbjct: 1   MVNQRRRLAQKRYKEANPELFPKAEPTPPKDPNKKKKKK----SLFKKKKPGSSTDRPQR 60

Query: 61  KGFK-KHPLRVPGMKPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKNCPE 120
            G   +HPLRVPGMKPGE C+IC +K HIAK CPEK++W++NKICL CRRRGHSLKNCPE
Sbjct: 61  TGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPE 120

Query: 121 KNDATVEKKLCYNCGETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHGIYP 180
           KN+ + EKKLCYNCG+TGHSL+ CP P+EDGGTKFASCFIC   GH+SKNCP+N HGIYP
Sbjct: 121 KNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYP 180

Query: 181 KGGCCKICGEVTHLAKDCPNKSTHVYAGAGVSGYRSSGYMETSRRPETRLVSGDDLADDF 240
            GGCCK+CG V HL KDCP+K    +        ++S +  T R   T+  SGDDL DDF
Sbjct: 181 MGGCCKVCGSVAHLVKDCPDK----FNQESAQPKKTSRFDATPRGKLTKF-SGDDLEDDF 240

Query: 241 M----------IDEDQMQMKDAKPEKRKGPKVVKFM 266
                        +D  Q      +K++GPK+V F+
Sbjct: 241 TEEPKSSKKINTSDDSAQNSVEVKKKKQGPKIVNFV 267

[Close]

BLAST of Sed0010584 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 72.0 bits (175), Expect = 8.1e-13
Identity = 38/124 (30.65%), Postives = 54/124 (43.55%), Query Frame = 0


Query: 74  KPGESCYICKAKEHIAKFCPEKAQWDKNKICLLCRRRGHSLKNCPEKNDATVEKKLCYNC 133
           K  + C+IC + EH AK C       K   C +C++ GH  K+CP+K     +  +C  C
Sbjct: 186 KRRKPCFICGSLEHGAKQC------SKGHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRC 245

Query: 134 GETGHSLASCPQPLEDGGTKFASCFICNETGHLSKNCPKNTHGIYPKGGCCKICGEVTHL 193
           G+ GH +  C         K   C+IC   GHL    P N+         C  CG++ H 
Sbjct: 246 GDFGHDMILCKYEYSKEDLKDVQCYICKSFGHLCCVEPGNS---LSWAVSCYRCGQLGHS 300

Query: 194 AKDC 198
              C
Sbjct: 306 GLAC 300

[Close]

BLAST of Sed0010584 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-10
Identity = 41/131 (31.30%), Postives = 60/131 (45.80%), Query Frame = 0


Query: 104 CLLCRRRGHSLKNC--------PEKNDATVEKKLCYNCGETGHSLASCPQP---LEDGGT 163
           C  C   GH  K+C         E+     E   CYNCG+TGH    C       + G T
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEG--CYNCGDTGHFARDCTSAGNGDQRGAT 161

Query: 164 KFAS--CFICNETGHLSKNCPKNTHGIYPKGGC-------CKICGEVTHLAKDCPNK--S 213
           K  +  C+ C + GH++++C + + G   + G        C  CG+V H A+DC  K  +
Sbjct: 162 KGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAA 221

[Close]

BLAST of Sed0010584 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 42.7 bits (99), Expect = 5.2e-04
Identity = 22/66 (33.33%), Postives = 30/66 (45.45%), Query Frame = 0


Query: 156 SCFICNETGHLSKNCPKNTHGIYPKGGC---------CKICGEVTHLAKDCPNKSTHVYA 213
           +CF C E GH++K+C   + G    GG          C +CG+V H A+DC         
Sbjct: 95  NCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNSG 154

The following BLAST results are available for this feature:

BLAST of Sed0010584 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945772.1	3.9e-126	81.48	uncharacterized protein LOC111449917 [Cucurbita moschata]	[more]
XP_023542027.1	1.1e-125	81.85	uncharacterized protein LOC111802000 [Cucurbita pepo subsp. pepo]	[more]
XP_022967999.1	9.6e-125	80.74	uncharacterized protein LOC111467373 [Cucurbita maxima]	[more]
XP_031738808.1	2.8e-124	80.37	zinc finger CCHC domain-containing protein 9 [Cucumis sativus] >KGN57377.1 hypot...	[more]
KAG6574179.1	3.6e-124	80.37	hypothetical protein SDJN03_28066, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0010584 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9HFF2	4.7e-26	44.36	Uncharacterized protein C683.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q8N567	5.4e-22	37.68	Zinc finger CCHC domain-containing protein 9 OS=Homo sapiens OX=9606 GN=ZCCHC9 P...	[more]
Q8R1J3	4.6e-21	42.86	Zinc finger CCHC domain-containing protein 9 OS=Mus musculus OX=10090 GN=Zcchc9 ...	[more]
Q8T8R1	4.3e-19	36.29	CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster OX=7227 GN=CG380...	[more]
Q04832	6.2e-18	30.38	DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1	[more]

BLAST of Sed0010584 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1V2	1.9e-126	81.48	uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]
A0A6J1HYC2	4.6e-125	80.74	uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373...	[more]
A0A0A0L9S9	1.3e-124	80.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182130 PE=4 SV=1	[more]
A0A5D3DHA5	1.5e-123	76.74	Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1CI48	1.9e-123	80.52	uncharacterized protein LOC111011601 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]

BLAST of Sed0010584 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52380.1	1.2e-88	58.33	VASCULAR-RELATED NAC-DOMAIN 6	[more]
AT3G43590.1	8.1e-13	30.65	zinc knuckle (CCHC-type) family protein	[more]
AT4G36020.1	3.7e-10	31.30	cold shock domain protein 1	[more]
AT2G17870.1	5.2e-04	33.33	cold shock domain protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 156..172 e-value: 2.9E-4 score: 30.2 coord: 103..119 e-value: 0.16 score: 16.1 coord: 129..145 e-value: 0.001 score: 28.4 coord: 78..94 e-value: 0.023 score: 21.3 coord: 183..199 e-value: 0.012 score: 23.1
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 157..172 e-value: 1.5E-5 score: 24.8 coord: 129..145 e-value: 2.0E-5 score: 24.5
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 184..199 score: 8.746164
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 157..172 score: 9.883478
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 130..145 score: 10.048306
None	No IPR available	GENE3D	4.10.60.10		coord: 98..151 e-value: 1.1E-10 score: 43.3
None	No IPR available	GENE3D	4.10.60.10		coord: 152..209 e-value: 9.3E-12 score: 46.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..266
None	No IPR available	PANTHER	PTHR47798	OS04G0555800 PROTEIN	coord: 1..265
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 183..198 e-value: 0.68 score: 9.7 coord: 102..118 e-value: 0.018 score: 14.8
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 72..121
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 125..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010584.1	Sed0010584.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding