Sed0010559 (gene) Chayote v1

Overview


Name	Sed0010559
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nuclear transcription factor Y subunit C-2
Location	LG10: 35109340 .. 35112414 (+)
RNA-Seq Expression	Sed0010559
Synteny	Sed0010559

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATCTCTTTCAGCAATTCTGCTTCTCCATCCACTCTCTCTCTGCCACTTGTAATCCGCCATAGCTCTCTCTCCTCGACACGTTTCTCTTTTTATAACCCATTTCTTCTTTCTCTCTTTAGGGTTTTTTTATCTACTCAATGAGCTTTGCTGGATTTCCAGTTTGAAAATCTGAGGTTTTTTCTTTTTATTAATCTTTTTTGTTCTTTAATTTGATGTTTATGATGATGGGTATGCTTTATTTTCAGCTCTTTATCTCTATTTTGCTTTGATTTTGGGTTTGTAGTGATGTTGTTTCTCTGGTGCATGATGGAAGTTATGGATATAATTGCATGATTGGAATTTGTTTGTTGTTTCTTTACTTGATCATTGTTTCTGTTTAACTATTTGTCTTCTTTTTTATTATTTGGGATGATGGTATTGATTATGGATTGTAGTGGTTTTGAATACTATTTGGATTGTGTTTGTTCTTGTTCTGACTGATTTGGGGATTGAAATCCATGGCTAAGTTGTGAGCTTAACAACATTTGGATGGGTGGGTGATCCAAACTTCTAACCTCTTGATCCGGGATTTATTTTGGCCGTCGGTTGAATTATGTTAAATCACCGATCAACAAAGGATTCACTTTGGCCATGTGTGGAATGATTTTAAATCATTGATCAATACAAAGCTTATGGGGATGGATTGAAGTAAATTTACAAGTAAAATTCAATTTTAATTGAGGAGGAAAATGATACGGCTAACTTGAACTGAGGATCTAGAGATACTGTGTTGAATTATCTTATATCACCCGTCAACCCAAAAGCTTAAGCAGATGGGAGGGGATATCAACCAAAACTATGGCTAAGGGATTGATTTCAATCTAAACTCTGGAAATTATTGGAGATCTGGGATTGGTTGAGTTGAGTTTGAAGATGGAACAGATTGGAGAGTTGAGGATTTCATTAATCTTGTTGTGTGATTAGATGCCACTTTATTGAAGGTTACTTTTTCTCATAATGGATATTTTTAGCTTGAATTATTTGATGAGTGGTTGTGTGAGAGTCTAGGCTGTATTTTCTGGCATGGAGGGAAGGACTATCATTACTCTAAATTTCTTTTTTATTGCTTTGCTGAAGGCTGTTTGAAAACTGGGTCCTTGTCCTTTTTATTTGTACTTAACAGATTGATAATGGTAAATATTTTTTTTAATAGACTGATGCTGCTTTTACTGACTTTGCTAATAGTGTAATGGAAGTTTGGGATGGGCGTGGGTACCCTCGGGCATGTGGTGGGGCGGCGGCGGTTATTAAAAAAAATAGTTTGAAAGTCTTTTGGAATTGAATTCTCCTTTTTCTCTTAAATGATCAAAGCCATGAAGGTTGTTTAAGGATGGGAAAAATGTTGGGTTTGATGGTGCTTTTTGGTCATATTCCCTGTTTTTCTTTCTCTTCCTACTTTTTTGGGATAGGAAAATTCAATATGTTTGATTTCTTTTTAAGTAAATTTACTTTCTTGTTCTCTTGACTTTAAATGTAAGTAAATTTACTTAAAATAAATAATTTTCAAACAGAAATATTCAAACATAATTCATCATTTTAAATCATATTTTTATTTATGTCTCTGATAAAAAAAAATAGAAAGAAAGAACACTTTTGTTTTTATAATGGTCCTTGAGAGAAGCCTTGTTGGTTGAGGCTAGGTATGCTTTCTTAGAGGTCTCAGGTTCAAGCCCTACGAATGAGCTTTATTGTAAAATTGTTATTTTTTGAGTTCGGGCCTTTGGACAGGCACAACTCCTATTTTCTTATTTAAAAAAAAAAAAAAAAAATTTGTATTTAAAATTTACATACAGTTTTCAGTAAAATAAGAGCATTCATCATTTCCCTTTAGTATGCTGATTCTACCAAGTTCTTTGCAACTGAGTTAGTCTTCTTAATGTTGTATGTTTTTTTCTGTTTTAATCAGAAGTGTGGAAAATACACTACCTATTGTGAGCCATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAACCGCAGCAGCCCGGTGTCGGTGCCGGGCAATTACCTTATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCGGGAACTCCTTCTATTACGATCCCCTCGACTCAGCAATCATCCAATTTCTCTAATTCTCCTCACCAGCTTGCCTTTCAGCAGGCTCAACATTTCCACCACCAGCAACAACAGCAGCAGCAACAACAGCTGCAAATGTTTTGGGCAAACCAAATTCAAGAGATTGAACAAACATCTGACTTCAAGAACCACAGTCTCCCCCTTGCCCGAATCAAGAAAATAATGAAAGCGGATGAAGATGTCCGAATGATTTCAGCTGAAGCGCCCGTTATATTCGCAAAGGCGTGCGAAATGTTTGTCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATCGCAGCTGCAATATCAAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGACTTGGAATCACGAAAGCTTCTATTCCCGTTGTTGGTTCGCCGTCTGATATTCCTTATTACTACGTTCCATCTCAGCATCCGGTGGGTGCTTCGGGGATGATCTTGGGAAAGCAATTAGATCAAGCGAACATGTACGGTGCCACGACTCAACATCCCCGACCACCGACGATGCCTTTCATGCCATGGCCACATGCACAATCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGGATAGGTGAAAGAAGTAGGCGTTTTCGAGACGGTCATGATATGATTGGTAGAGGTGATACCGAGTGATGTTTAATGTGTTTACTGTCTAGTTTAGTTCATAAAAAAAAAAGCTTGTAGTAGAGAACTTGTTAATGATGACAAGTTGCAGTTAAGTTTGTATGATGAGAGGGTGTGTTTATCTCTTGTTACTCTAATTATCTTTATTAATATAATGTACAACAATGTATGTGGAAGAGGAGGATTCAACTTTGGCAAAAGAACACTATAATTTGAATTTTGTTGAGGTTGTGTTTGGCTGG

mRNA sequence

TGAAAATCTCTTTCAGCAATTCTGCTTCTCCATCCACTCTCTCTCTGCCACTTGTAATCCGCCATAGCTCTCTCTCCTCGACACGTTTCTCTTTTTATAACCCATTTCTTCTTTCTCTCTTTAGGGTTTTTTTATCTACTCAATGAGCTTTGCTGGATTTCCAGTTTGAAAATCTGAGAAGTGTGGAAAATACACTACCTATTGTGAGCCATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAACCGCAGCAGCCCGGTGTCGGTGCCGGGCAATTACCTTATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCGGGAACTCCTTCTATTACGATCCCCTCGACTCAGCAATCATCCAATTTCTCTAATTCTCCTCACCAGCTTGCCTTTCAGCAGGCTCAACATTTCCACCACCAGCAACAACAGCAGCAGCAACAACAGCTGCAAATGTTTTGGGCAAACCAAATTCAAGAGATTGAACAAACATCTGACTTCAAGAACCACAGTCTCCCCCTTGCCCGAATCAAGAAAATAATGAAAGCGGATGAAGATGTCCGAATGATTTCAGCTGAAGCGCCCGTTATATTCGCAAAGGCGTGCGAAATGTTTGTCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATCGCAGCTGCAATATCAAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGACTTGGAATCACGAAAGCTTCTATTCCCGTTGTTGGTTCGCCGTCTGATATTCCTTATTACTACGTTCCATCTCAGCATCCGGTGGGTGCTTCGGGGATGATCTTGGGAAAGCAATTAGATCAAGCGAACATGTACGGTGCCACGACTCAACATCCCCGACCACCGACGATGCCTTTCATGCCATGGCCACATGCACAATCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGGATAGGTGAAAGAAGTAGGCGTTTTCGAGACGGTCATGATATGATTGGTAGAGGTGATACCGAGTGATGTTTAATGTGTTTACTGTCTAGTTTAGTTCATAAAAAAAAAAGCTTGTAGTAGAGAACTTGTTAATGATGACAAGTTGCAGTTAAGTTTGTATGATGAGAGGGTGTGTTTATCTCTTGTTACTCTAATTATCTTTATTAATATAATGTACAACAATGTATGTGGAAGAGGAGGATTCAACTTTGGCAAAAGAACACTATAATTTGAATTTTGTTGAGGTTGTGTTTGGCTGG

Coding sequence (CDS)

ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAACCGCAGCAGCCCGGTGTCGGTGCCGGGCAATTACCTTATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCGGGAACTCCTTCTATTACGATCCCCTCGACTCAGCAATCATCCAATTTCTCTAATTCTCCTCACCAGCTTGCCTTTCAGCAGGCTCAACATTTCCACCACCAGCAACAACAGCAGCAGCAACAACAGCTGCAAATGTTTTGGGCAAACCAAATTCAAGAGATTGAACAAACATCTGACTTCAAGAACCACAGTCTCCCCCTTGCCCGAATCAAGAAAATAATGAAAGCGGATGAAGATGTCCGAATGATTTCAGCTGAAGCGCCCGTTATATTCGCAAAGGCGTGCGAAATGTTTGTCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATCGCAGCTGCAATATCAAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGACTTGGAATCACGAAAGCTTCTATTCCCGTTGTTGGTTCGCCGTCTGATATTCCTTATTACTACGTTCCATCTCAGCATCCGGTGGGTGCTTCGGGGATGATCTTGGGAAAGCAATTAGATCAAGCGAACATGTACGGTGCCACGACTCAACATCCCCGACCACCGACGATGCCTTTCATGCCATGGCCACATGCACAATCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGGATAG

Protein sequence

MDQSERSQHQQQPQQPGVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG

Homology

[Close]

BLAST of Sed0010559 vs. NCBI nr
Match: XP_004136852.1 (nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_008455267.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_011658757.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_016901763.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_031744926.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus] >KAA0031528.1 nuclear transcription factor Y subunit C-2 [Cucumis melo var. makuwa] >KGN43662.1 hypothetical protein Csa_017325 [Cucumis sativus] >TYK06981.1 nuclear transcription factor Y subunit C-2 [Cucumis melo var. makuwa])

HSP 1 Score: 465.3 bits (1196), Expect = 3.5e-127
Identity = 243/267 (91.01%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQP  GVGAGQL YSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKAS+PVVGSP+D+PYYYVPSQHPVGA+GMI+GKQLDQANMYGAT Q P
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPTMPFMPWPHAQSQQQQQTQQQSDG 266
           R P+MPFMPWPH Q QQQQQTQQQSDG
Sbjct: 241 R-PSMPFMPWPHTQPQQQQQTQQQSDG 266

[Close]

BLAST of Sed0010559 vs. NCBI nr
Match: XP_038888434.1 (nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888435.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888436.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888437.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida])

HSP 1 Score: 459.1 bits (1180), Expect = 2.5e-125
Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQH QQ QQP   VGAGQLPYSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPH
Sbjct: 1   MDQSERSQHHQQSQQPAGSVGAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKASIPVVGSP+D+PYYYVPSQHPVGA+GMI+GKQLDQ NMYG T Q P
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQVNMYGGTAQQP 240

Query: 241 RPPTMPFMPWPHAQSQQQQQTQQQSD 265
           R P+MPFMPWPH Q QQQQQTQQQSD
Sbjct: 241 R-PSMPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of Sed0010559 vs. NCBI nr
Match: XP_022988890.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima])

HSP 1 Score: 454.9 bits (1169), Expect = 4.7e-124
Identity = 242/269 (89.96%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQ   GVGAGQLPYSNPYQTAPM ASGTP+ITIP TQQ S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLAFQQAQHFH QQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKASIPVVGSP+D+PYYYVPSQHPV A+GMI+GKQLDQANMYGAT Q P
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPTMPFMPWPHAQS---QQQQQTQQQSD 265
           RPP +PFMPWPH Q+   QQQQQTQQQSD
Sbjct: 241 RPP-IPFMPWPHTQAQQQQQQQQTQQQSD 268

[Close]

BLAST of Sed0010559 vs. NCBI nr
Match: XP_022157652.1 (nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157653.1 nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157654.1 nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157655.1 nuclear transcription factor Y subunit C-2 [Momordica charantia])

HSP 1 Score: 454.9 bits (1169), Expect = 4.7e-124
Identity = 239/266 (89.85%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQP  GVGAGQLPYSNPY+T  MVASGTP+ITIP TQ  S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKASIPVVGSP+D+PYYYVP QHPV A GMI+GKQLDQANMYG T Q P
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQP 240

Query: 241 RPPTMPFMPWPHAQSQQQQQTQQQSD 265
           RPP MPFMPWPH Q QQQQQTQQQSD
Sbjct: 241 RPP-MPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of Sed0010559 vs. NCBI nr
Match: XP_022927856.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_022927857.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >KAG7022566.1 Nuclear transcription factor Y subunit C-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-123
Identity = 241/269 (89.59%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQ   GVGAGQLPYSNPYQTAPM ASGTP+ITIP TQQ S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLAFQQAQHFH QQQQQQQQQLQ+FWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKASIPVVGSP+D+PYYYVPSQHPV A+GMI+GKQLDQANMYGAT Q P
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPTMPFMPWPHAQS---QQQQQTQQQSD 265
           RPP +PFMPWPH Q+   QQQQQTQQQSD
Sbjct: 241 RPP-IPFMPWPHTQAQQQQQQQQTQQQSD 268

[Close]

BLAST of Sed0010559 vs. ExPASy Swiss-Prot
Match: Q8LCG7 (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 5.5e-67
Identity = 148/214 (69.16%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           M+QSE  Q QQQ        G + Y  P  YQ+ P+                    N+  
Sbjct: 1   MEQSEEGQQQQQ-------QGVMDYVPPHAYQSGPV--------------------NAAS 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
            +AFQQA HFHH  QQQQQQQLQMFWANQ+QEIE T+DFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIP-VVGSPSDIPYYYVPSQ 212
           RDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Sed0010559 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.5e-61
Identity = 149/263 (56.65%), Postives = 180/263 (68.44%), Query Frame = 0


Query: 12  QPQQP-GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSP------HQLAFQQ 71
           QPQ   GV AG       Y+ A  V +  P++    +Q + +F  +P      HQL +QQ
Sbjct: 6   QPQPAIGVVAGGSQVYPAYRPAATVPT-APAVIPAGSQPAPSFPANPDQLSAQHQLVYQQ 65

Query: 72  AQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEA 131
           AQ FH Q QQQQQ+QLQ FWA ++ +IEQT+DFKNHSLPLARIKKIMKADEDVRMISAEA
Sbjct: 66  AQQFHQQLQQQQQRQLQQFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA 125

Query: 132 PVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKE 191
           PVIFAKACE+F+LELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKE
Sbjct: 126 PVIFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKE 185

Query: 192 EGLGITKASIPVVGSPSD-IPY-YYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPT 251
           EG+G+ +A +P +G P+D  PY YYVP Q   GA              YG    HP    
Sbjct: 186 EGVGLPRAGLPPLGVPADSYPYGYYVPQQQVPGA-----------GIAYGGQQGHPG--- 245

Query: 252 MPFMPWPHAQSQQQQ-QTQQQSD 265
                W   Q QQ++   +QQSD
Sbjct: 246 ---YLWQDPQEQQEEPPAEQQSD 250

[Close]

BLAST of Sed0010559 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-55
Identity = 141/255 (55.29%), Postives = 175/255 (68.63%), Query Frame = 0


Query: 14  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQ 73
           QQ    +G + Y +NPYQT PM    T + T+      +  +  P QLAF Q     HQQ
Sbjct: 3   QQDHGQSGAMNYGTNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI----HQQ 62

Query: 74  QQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAK 133
           QQQQQ  QQLQ FW NQ +EIE+T+DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+
Sbjct: 63  QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAR 122

Query: 134 ACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-I 193
           ACEMF+LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I
Sbjct: 123 ACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSI 182

Query: 194 TKASIPVVGSPSDIPYYYVPS-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPW 253
            + ++P   + +  PY Y+P+   P+G  GM++G      N  GA       P  P+M  
Sbjct: 183 PRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGAY------PPNPYMGQ 231

Query: 254 PHAQSQQQQQTQQQS 264
           P  Q Q   Q  Q++
Sbjct: 243 PMWQQQAPDQPDQEN 231

[Close]

BLAST of Sed0010559 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-54
Identity = 110/170 (64.71%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 69  HHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 128
           +H   QQQQQQLQ+FW  Q QEIEQ +DFKNH LPLARIKKIMKADEDVRMISAEAP++F
Sbjct: 33  YHHLLQQQQQQLQLFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF 92

Query: 129 AKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 188
           AKACE+F+LELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   
Sbjct: 93  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA-A 152

Query: 189 ITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 239
           +    + V  + S +PYYY P   P G  GM++G+     N  G   Q P
Sbjct: 153 VLGGGMVVAPTASGVPYYYPPMGQPAGPGGMMIGRPAMDPN--GVYVQPP 199

[Close]

BLAST of Sed0010559 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.5e-53
Identity = 108/166 (65.06%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 69  HHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 128
           +H   QQQQQQLQMFW  Q QEIEQ +DFKNH LPLARIKKIMKADEDVRMISAEAP++F
Sbjct: 46  YHHLLQQQQQQLQMFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF 105

Query: 129 AKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE--G 188
           AKACE+F+LELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR+E+KEE   
Sbjct: 106 AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDA 165

Query: 189 LGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGK-QLDQANMY 232
                    V  + S +PYYY P   P    GM++G+  +D + +Y
Sbjct: 166 ASALGGGGMVAPAASGVPYYYPPMGQPAVPGGMMIGRPAMDPSGVY 211

[Close]

BLAST of Sed0010559 vs. ExPASy TrEMBL
Match: A0A1S3C190 (nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC103495470 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 243/267 (91.01%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQP  GVGAGQL YSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKAS+PVVGSP+D+PYYYVPSQHPVGA+GMI+GKQLDQANMYGAT Q P
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPTMPFMPWPHAQSQQQQQTQQQSDG 266
           R P+MPFMPWPH Q QQQQQTQQQSDG
Sbjct: 241 R-PSMPFMPWPHTQPQQQQQTQQQSDG 266

[Close]

BLAST of Sed0010559 vs. ExPASy TrEMBL
Match: A0A5A7SLP2 (Nuclear transcription factor Y subunit C-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002960 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 243/267 (91.01%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQP  GVGAGQL YSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKAS+PVVGSP+D+PYYYVPSQHPVGA+GMI+GKQLDQANMYGAT Q P
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPTMPFMPWPHAQSQQQQQTQQQSDG 266
           R P+MPFMPWPH Q QQQQQTQQQSDG
Sbjct: 241 R-PSMPFMPWPHTQPQQQQQTQQQSDG 266

[Close]

BLAST of Sed0010559 vs. ExPASy TrEMBL
Match: A0A0A0K5U1 (Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 243/267 (91.01%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQP  GVGAGQL YSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKAS+PVVGSP+D+PYYYVPSQHPVGA+GMI+GKQLDQANMYGAT Q P
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPTMPFMPWPHAQSQQQQQTQQQSDG 266
           R P+MPFMPWPH Q QQQQQTQQQSDG
Sbjct: 241 R-PSMPFMPWPHTQPQQQQQTQQQSDG 266

[Close]

BLAST of Sed0010559 vs. ExPASy TrEMBL
Match: A0A6J1JII4 (nuclear transcription factor Y subunit C-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486109 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124
Identity = 242/269 (89.96%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQ   GVGAGQLPYSNPYQTAPM ASGTP+ITIP TQQ S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLAFQQAQHFH QQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKASIPVVGSP+D+PYYYVPSQHPV A+GMI+GKQLDQANMYGAT Q P
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPTMPFMPWPHAQS---QQQQQTQQQSD 265
           RPP +PFMPWPH Q+   QQQQQTQQQSD
Sbjct: 241 RPP-IPFMPWPHTQAQQQQQQQQTQQQSD 268

[Close]

BLAST of Sed0010559 vs. ExPASy TrEMBL
Match: A0A6J1DV19 (nuclear transcription factor Y subunit C-2 OS=Momordica charantia OX=3673 GN=LOC111024312 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124
Identity = 239/266 (89.85%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           MDQSERSQHQQQ QQP  GVGAGQLPYSNPY+T  MVASGTP+ITIP TQ  S+FSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP 240
           RDELKEEGLGITKASIPVVGSP+D+PYYYVP QHPV A GMI+GKQLDQANMYG T Q P
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQP 240

Query: 241 RPPTMPFMPWPHAQSQQQQQTQQQSD 265
           RPP MPFMPWPH Q QQQQQTQQQSD
Sbjct: 241 RPP-MPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of Sed0010559 vs. TAIR 10
Match: AT1G56170.1 (nuclear factor Y, subunit C2 )

HSP 1 Score: 255.8 bits (652), Expect = 3.9e-68
Identity = 148/214 (69.16%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           M+QSE  Q QQQ        G + Y  P  YQ+ P+                    N+  
Sbjct: 1   MEQSEEGQQQQQ-------QGVMDYVPPHAYQSGPV--------------------NAAS 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
            +AFQQA HFHH  QQQQQQQLQMFWANQ+QEIE T+DFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIP-VVGSPSDIPYYYVPSQ 212
           RDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Sed0010559 vs. TAIR 10
Match: AT1G56170.2 (nuclear factor Y, subunit C2 )

HSP 1 Score: 255.8 bits (652), Expect = 3.9e-68
Identity = 148/214 (69.16%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 1   MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPH 60
           M+QSE  Q QQQ        G + Y  P  YQ+ P+                    N+  
Sbjct: 1   MEQSEEGQQQQQ-------QGVMDYVPPHAYQSGPV--------------------NAAS 60

Query: 61  QLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVR 120
            +AFQQA HFHH  QQQQQQQLQMFWANQ+QEIE T+DFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMF+LELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIP-VVGSPSDIPYYYVPSQ 212
           RDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Sed0010559 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-56
Identity = 141/255 (55.29%), Postives = 175/255 (68.63%), Query Frame = 0


Query: 14  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQ 73
           QQ    +G + Y +NPYQT PM    T + T+      +  +  P QLAF Q     HQQ
Sbjct: 3   QQDHGQSGAMNYGTNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI----HQQ 62

Query: 74  QQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAK 133
           QQQQQ  QQLQ FW NQ +EIE+T+DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+
Sbjct: 63  QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAR 122

Query: 134 ACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-I 193
           ACEMF+LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I
Sbjct: 123 ACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSI 182

Query: 194 TKASIPVVGSPSDIPYYYVPS-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPW 253
            + ++P   + +  PY Y+P+   P+G  GM++G      N  GA       P  P+M  
Sbjct: 183 PRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGAY------PPNPYMGQ 231

Query: 254 PHAQSQQQQQTQQQS 264
           P  Q Q   Q  Q++
Sbjct: 243 PMWQQQAPDQPDQEN 231

[Close]

BLAST of Sed0010559 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-56
Identity = 141/255 (55.29%), Postives = 175/255 (68.63%), Query Frame = 0


Query: 14  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQ 73
           QQ    +G + Y +NPYQT PM    T + T+      +  +  P QLAF Q     HQQ
Sbjct: 3   QQDHGQSGAMNYGTNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI----HQQ 62

Query: 74  QQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAK 133
           QQQQQ  QQLQ FW NQ +EIE+T+DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+
Sbjct: 63  QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAR 122

Query: 134 ACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-I 193
           ACEMF+LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I
Sbjct: 123 ACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSI 182

Query: 194 TKASIPVVGSPSDIPYYYVPS-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPW 253
            + ++P   + +  PY Y+P+   P+G  GM++G      N  GA       P  P+M  
Sbjct: 183 PRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGAY------PPNPYMGQ 231

Query: 254 PHAQSQQQQQTQQQS 264
           P  Q Q   Q  Q++
Sbjct: 243 PMWQQQAPDQPDQEN 231

[Close]

BLAST of Sed0010559 vs. TAIR 10
Match: AT1G08970.3 (nuclear factor Y, subunit C9 )

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-56
Identity = 141/255 (55.29%), Postives = 175/255 (68.63%), Query Frame = 0


Query: 14  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQ 73
           QQ    +G + Y +NPYQT PM    T + T+      +  +  P QLAF Q     HQQ
Sbjct: 3   QQDHGQSGAMNYGTNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI----HQQ 62

Query: 74  QQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAK 133
           QQQQQ  QQLQ FW NQ +EIE+T+DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+
Sbjct: 63  QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAR 122

Query: 134 ACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-I 193
           ACEMF+LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I
Sbjct: 123 ACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSI 182

Query: 194 TKASIPVVGSPSDIPYYYVPS-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPW 253
            + ++P   + +  PY Y+P+   P+G  GM++G      N  GA       P  P+M  
Sbjct: 183 PRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGAY------PPNPYMGQ 231

Query: 254 PHAQSQQQQQTQQQS 264
           P  Q Q   Q  Q++
Sbjct: 243 PMWQQQAPDQPDQEN 231

The following BLAST results are available for this feature:

BLAST of Sed0010559 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136852.1	3.5e-127	91.01	nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PRE...	[more]
XP_038888434.1	2.5e-125	90.23	nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_03888843...	[more]
XP_022988890.1	4.7e-124	89.96	nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891...	[more]
XP_022157652.1	4.7e-124	89.85	nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157653.1...	[more]
XP_022927856.1	1.4e-123	89.59	nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_0229278...	[more]

BLAST of Sed0010559 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCG7	5.5e-67	69.16	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	3.5e-61	56.65	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8L4B2	1.7e-55	55.29	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SMP0	1.1e-54	64.71	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FMV5	4.5e-53	65.06	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Sed0010559 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C190	1.7e-127	91.01	nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC1034954...	[more]
A0A5A7SLP2	1.7e-127	91.01	Nuclear transcription factor Y subunit C-2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0K5U1	1.7e-127	91.01	Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=...	[more]
A0A6J1JII4	2.3e-124	89.96	nuclear transcription factor Y subunit C-2-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DV19	2.3e-124	89.85	nuclear transcription factor Y subunit C-2 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Sed0010559 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56170.1	3.9e-68	69.16	nuclear factor Y, subunit C2	[more]
AT1G56170.2	3.9e-68	69.16	nuclear factor Y, subunit C2	[more]
AT1G08970.4	1.2e-56	55.29	nuclear factor Y, subunit C9	[more]
AT1G08970.1	1.2e-56	55.29	nuclear factor Y, subunit C9	[more]
AT1G08970.3	1.2e-56	55.29	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 62..179 e-value: 1.1E-47 score: 163.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 61..173
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 52..164 e-value: 1.1E-17 score: 64.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 8..258
None	No IPR available	PANTHER	PTHR10252:SF117	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9	coord: 8..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010559.1	Sed0010559.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity