Sed0010487 (gene) Chayote v1

Overview
NameSed0010487
Typegene
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L35a-1-like
LocationLG14: 877782 .. 881448 (-)
RNA-Seq ExpressionSed0010487
SyntenySed0010487
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTATAATTAAAAAGAAAAAAAGAAAAAGAAAAAAAAATCATGGTACTAGCATCGATAGAGAAACCCTAGAAGAAGTGCTTTAAATCAAATCATTATAAAGGTTTCCACTTCTCCAAGCGGCCACCTCCCCTCCGAGACGCAGCTCCATCTTCCTCGCACTCCAACCTTGCAAATCTCAGGTGATTATTCCAAGATTTCTTCTGTGTTTTCTTCTCCACAGCGTTTACATTTGATCGCCGATCTCAATTCTTAGTTTCTTGCCTTTTGTGTACCAGTCTGCGGCAGCCATGGTGAAGGGAAGCCAGGGAGAAAGAGTCAGGTCCCTTTTCCAAACCCTAAATCATTCATTCATTGTTTCATATTCTTATTCCGTACCAGGCTGTGCTAATAATGTATTGTGTTTGTTTCAGACTCTACGTCAGAGGAACGGTCCTTGGCTACAAGAGGTAAATTGATTTCGCTTTCATCATGTCAGTGGAATATTTTGTTGCTTCTCTTTTAGTTATGTGTAGTATTTAGTTGAATAATGTTAATGTATACAGAAATAGATGAAATTGGCTACTTTTTAGGGTGTGCTCCCCTTGAGTTTGCTGTAGGGATTAATTTCCTAAGTAGCTCCAAATTTTTCATCTGTTTCCATGTATTGTTTCTGTACTAGGGACGAGCGTGGTTGCCTCTTGGTTTAGAGAACAGAAACTTCAAGTTTCCGGGTCATAGAGAAAAACAAATCAAAATGATTGTAGTGCTATGCAGAGAAAGTTGACGAAACTTGAATTGAAATATGCGTTAGGTTTAGTGATGAGGTTTTTGTTTTGGAAAAGAGACAATTTCATGGGCACATTCCCAATTACAAAAGGGATCTCCAGCTATTCAAAAGAGTGTCATAACATAACTGTAATCATATAATAGGGAGAACGCTTAACCCATTCTTGATAGCATTGAAGGTTTAGTGATAAGTTGCTGAGGGATGTTATAGTTTATGAGGGAGCTAAGAATGTGCAATTGTTGTTTAGGTCGAAGTCAAACCAGTATCCTAGGACGTCGCTGATTCAGATTGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGTTTGGCATACATTTACAAGGCTAAAGTGAAGCAGAATGGATCTCACTATCGATGCATTTGGGGCAAGGTATCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCGAACTTGCCCCCAAAATCCATGGTAAACTGGAATTAGTTGCTGTTTCTTAATACTCGTTTAATTAATGGTGGTTAATTGGGATATTTTTTCTGATCGAATTGCTTGACAATTTTGCAGGGTGATAAAGTTAGGGTATTTATGTACCCCAGCAATATCTAAGGTACACACCCTTCCTCCACTCTTTTAGTTTTCAGAATTGTTAGTTGGCATTTGCATTTAGTAGTTCAAGGAAATAACCACCCATGCTGTGCATCTTTTTTTTTTGTTAAAGAAAGAAAATAATCTTAATAAGCAGATAAAAACACCAGATTGATATTGCCGACTTATCTATTTTTCTTTTCCTACATTAACTTTTTGTTTGCTTTTCTGTTAATGGGTTTTGTGATATAATCCTCCGATCATTTGGACTATGTTTCTAATTCTTTGTTTTTTCTTTCCTGTTCATTGCTGTTTGTATCTTCTTTTGAATGCATATGTCAGAATCAATGTTTTGAAAGGCTTAAGGCGGCCTTGAGGCATTTTCTCATCTCAAGGCGAGGCGTAAGCCTCATTTTAGATTGAAAAATACGTATTTAAAGCATAAAACATAAACTTTTTTTAAATTCTATAAGTTATAACATAGTAATACCCCTTAAAGTACACAAAAAAATAGAATTTGTATAAAAATAATAATAAGAAGAAGAAAATAAAAAATACATTAAACAAAAATTTTTAGAAAGTAAACAAAAAAAAACTGGAGAAGACATAATAAATGAGGTGTTCTATTAATTAAAAAACAGAAAAGATAACAAACTAATTTTAAACATAAATGATTATAAAAAGGATTAAGTGAAAACTAATAGTAATAATAATAATGAGGAAAAAAAACAAAGAAGAAAGAATTGAACATCATTGGTAAAATAGAATAACAGAATAATAATAAATGAAGAGAAAATTAAAAAAAAACCAAAAAGGAGAAGACAAAATATGTTGATTTTGTCAAAAAAAGAACAGAAAAAAAGAAGTGAATAAGAAAAGAAAGGTGGTGTTGTCAAAGACTCAAAGGAAGGGAGACACCTCCATCTTGTTTTGATAAGTGGTGGCCTGGGTTTCAATCCATTAATATAAGTGGTAGCCTTTTGTTTTTTAGATTGACTAATGGTATTTATCCTTTAAAACAACTTAACTGATACATTTTTTATCAATATTTGGGTCATAAAGATGGGCCACCTTCATTTAAGTTAGATACTTTAAATTATTCACACAGAATGTAAAGAACAAAAGGCTTACACCTTTAAGCCTCAGTTCAAAGAGGTGCAAGCCTCATTTTTCACTATCAAGGCGTAAGCCTCGAGGCTTTTTACTCCCGCCTCGAGGCATAAGCCTCGATCGATTCTTAAAACATTGGTCAGAATGATTATATATAGTTTGTTCTGTTTCTTTTTTCCCTAAAAGGAGCATTATGACAATCAGAAATTATTAAGACGTTTGTGTATATACATTCTTCCCATTGTGAATGCTTTTTTGTAGAGTTGCAGTGCTGTGATGATGCATCGTTTATACTCGTAATTTTACATTTTTATCAATGAAATTGTCTCTGTTACCAAATTAAAAAAAAAAAGATATTCAATATCCATTGTATGAACAAGGAGAAAAGTAACCTACCATAATTACTTCCCTTTCTTATCCTTACAATGGGAGTTTTAGTCTTCCGGATCAGTTTCTTATAATTTTTTTGTGGATTCATTTCCTCACAGTTCACTCATTCCAATCCACACCACATTAGGATCAGATGTCTTTCACTTGTCTGATAATACTTTTCAAACTCTTATGTATAGTTGCATTTCATGTGTATGATGGATATAAAGTTTTTAGTTACAGCAATGAATTTTCTTGCATAATTGTCCTTGTTATGAATTGGACTAATAGCTAATCTGTTTGTTTCTTTGTAACATAAAGACCTGTAATGGCTCACATCTTCTATTCAGAATGTTTGACTATATTGTTTTTGGAGTGTTGTTACTGATCATTTTTGTTTTTGTTTTTTTGCAGTTGCTCTGATCAGCTAGCTAGAGATCAGGTTTCATTTCTTTGTTGACTTGGATGAATTGATATTTTTCTTTTAGTTTCTTCTTCCTTCTGGACAATGTTTAGATGATGATGTTTACATGTAAAACTTAGACTTTATTTTGAATGTTCATTATGGAGTTTTCTTTCAATTTTGACTGAGTTTCATATCAAGGTTTAGTAACAATGGATGTACTCACTTGCATTTACAGGATCAGTCTGAGAATATTGATAAAGTGATGTGGGTCGGATTATGTGGAAAAATCATAATAAACATAGAAAATTATACAGAATTCCTATAATGGTGTTAAAACAGTTGTACAGTGACGACTATCAACATGTATTAAGCCCATAAAGGGTAGAAATCTATGAATTATTTTTTAAATCCATGAAGTTGC

mRNA sequence

ATTTATAATTAAAAAGAAAAAAAGAAAAAGAAAAAAAAATCATGGTACTAGCATCGATAGAGAAACCCTAGAAGAAGTGCTTTAAATCAAATCATTATAAAGGTTTCCACTTCTCCAAGCGGCCACCTCCCCTCCGAGACGCAGCTCCATCTTCCTCGCACTCCAACCTTGCAAATCTCAGTCTGCGGCAGCCATGGTGAAGGGAAGCCAGGGAGAAAGAGTCAGACTCTACGTCAGAGGAACGGTCCTTGGCTACAAGAGGTCGAAGTCAAACCAGTATCCTAGGACGTCGCTGATTCAGATTGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGTTTGGCATACATTTACAAGGCTAAAGTGAAGCAGAATGGATCTCACTATCGATGCATTTGGGGCAAGGTATCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCGAACTTGCCCCCAAAATCCATGGGTGATAAAGTTAGGGTATTTATGTACCCCAGCAATATCTAAGTTGCTCTGATCAGCTAGCTAGAGATCAGGTTTCATTTCTTTGTTGACTTGGATGAATTGATATTTTTCTTTTAGTTTCTTCTTCCTTCTGGACAATGTTTAGATGATGATGTTTACATGTAAAACTTAGACTTTATTTTGAATGTTCATTATGGAGTTTTCTTTCAATTTTGACTGAGTTTCATATCAAGGTTTAGTAACAATGGATGTACTCACTTGCATTTACAGGATCAGTCTGAGAATATTGATAAAGTGATGTGGGTCGGATTATGTGGAAAAATCATAATAAACATAGAAAATTATACAGAATTCCTATAATGGTGTTAAAACAGTTGTACAGTGACGACTATCAACATGTATTAAGCCCATAAAGGGTAGAAATCTATGAATTATTTTTTAAATCCATGAAGTTGC

Coding sequence (CDS)

ATGGTGAAGGGAAGCCAGGGAGAAAGAGTCAGACTCTACGTCAGAGGAACGGTCCTTGGCTACAAGAGGTCGAAGTCAAACCAGTATCCTAGGACGTCGCTGATTCAGATTGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGTTTGGCATACATTTACAAGGCTAAAGTGAAGCAGAATGGATCTCACTATCGATGCATTTGGGGCAAGGTATCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCGAACTTGCCCCCAAAATCCATGGGTGATAAAGTTAGGGTATTTATGTACCCCAGCAATATCTAA

Protein sequence

MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI
Homology
[Close]
BLAST of Sed0010487 vs. NCBI nr
Match: XP_022928725.1 (60S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022928726.1 60S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022928728.1 60S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_023522925.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo] >XP_023543608.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo] >XP_023543609.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo] >XP_023543610.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo] >KAG7033574.1 60S ribosomal protein L35a-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230.3 bits (586), Expect = 8.0e-57
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. NCBI nr
Match: XP_008442180.1 (PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo] >KAA0041236.1 60S ribosomal protein L35a-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 229.2 bits (583), Expect = 1.8e-56
Identity = 108/112 (96.43%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. NCBI nr
Match: XP_022967923.1 (60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967925.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967926.1 60S ribosomal protein L35a-1-like [Cucurbita maxima])

HSP 1 Score: 228.4 bits (581), Expect = 3.0e-56
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. NCBI nr
Match: XP_038883794.1 (60S ribosomal protein L35a-1-like [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 5.2e-56
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. NCBI nr
Match: XP_011653915.1 (60S ribosomal protein L35a-1 [Cucumis sativus] >KAE8649740.1 hypothetical protein Csa_012440 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 6.8e-56
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. ExPASy Swiss-Prot
Match: Q9LMK0 (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 8.6e-54
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGERVRLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           K K+NGSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. ExPASy Swiss-Prot
Match: Q9C912 (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 8.6e-54
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGERVRLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           K K+NGSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. ExPASy Swiss-Prot
Match: Q9FZH0 (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 9.5e-53
Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 2   VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAK 61
           +KG QGERVRLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
            K+NGSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG +VRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Sed0010487 vs. ExPASy Swiss-Prot
Match: P51422 (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-52
Identity = 96/111 (86.49%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 2   VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAK 61
           +KG QGERVRLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
            K+NGSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG +VRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Sed0010487 vs. ExPASy Swiss-Prot
Match: P41056 (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL33B PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-28
Identity = 59/105 (56.19%), Postives = 76/105 (72.38%), Query Frame = 0 

Query: 8   ERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGS 67
           E  RLYV+G  L Y+RSK    P  SLI+IEGV T +E  +Y GKR+AY+Y+A  +  GS
Sbjct: 3   ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGS 62

Query: 68  HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
             R +WGKV+R HGNSG+VRA F++NLP K+ G  VR+F+YPSNI
Sbjct: 63  KIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107

[Close]
BLAST of Sed0010487 vs. ExPASy TrEMBL
Match: A0A6J1EL43 (60S ribosomal protein L35a-1-like OS=Cucurbita moschata OX=3662 GN=LOC111435550 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.9e-57
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. ExPASy TrEMBL
Match: A0A5A7TGR3 (60S ribosomal protein L35a-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002100 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 8.6e-57
Identity = 108/112 (96.43%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. ExPASy TrEMBL
Match: A0A1S3B4N4 (60S ribosomal protein L35a-1-like OS=Cucumis melo OX=3656 GN=LOC103486112 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 8.6e-57
Identity = 108/112 (96.43%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. ExPASy TrEMBL
Match: A0A6J1HTF7 (60S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111467293 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. ExPASy TrEMBL
Match: A0A6J1HSC2 (60S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111466132 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.6e-56
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGS+GERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           KVKQNG+HYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. TAIR 10
Match: AT1G07070.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 210.7 bits (535), Expect = 6.1e-55
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGERVRLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           K K+NGSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. TAIR 10
Match: AT1G74270.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 210.7 bits (535), Expect = 6.1e-55
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGERVRLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
           K K+NGSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Sed0010487 vs. TAIR 10
Match: AT1G41880.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 207.2 bits (526), Expect = 6.8e-54
Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 2   VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAK 61
           +KG QGERVRLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
            K+NGSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG +VRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Sed0010487 vs. TAIR 10
Match: AT3G55750.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 206.8 bits (525), Expect = 8.8e-54
Identity = 96/111 (86.49%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 2   VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAK 61
           +KG QGERVRLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 113
            K+NGSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG +VRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

The following BLAST results are available for this feature:
BLAST of Sed0010487 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928725.18.0e-5797.3260S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022928726.1 60S ribos... [more]
XP_008442180.11.8e-5696.43PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo] >KAA0041236.1 60S ri... [more]
XP_022967923.13.0e-5696.4360S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967925.1 60S ribosom... [more]
XP_038883794.15.2e-5696.4360S ribosomal protein L35a-1-like [Benincasa hispida][more]
XP_011653915.16.8e-5695.5460S ribosomal protein L35a-1 [Cucumis sativus] >KAE8649740.1 hypothetical protei... [more]
BLAST of Sed0010487 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LMK08.6e-5485.7160S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=... [more]
Q9C9128.6e-5486.6160S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=... [more]
Q9FZH09.5e-5387.3960S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=... [more]
P514221.2e-5286.4960S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=... [more]
P410564.8e-2856.1960S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
BLAST of Sed0010487 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EL433.9e-5797.3260S ribosomal protein L35a-1-like OS=Cucurbita moschata OX=3662 GN=LOC111435550 ... [more]
A0A5A7TGR38.6e-5796.4360S ribosomal protein L35a-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A1S3B4N48.6e-5796.4360S ribosomal protein L35a-1-like OS=Cucumis melo OX=3656 GN=LOC103486112 PE=3 S... [more]
A0A6J1HTF71.5e-5696.4360S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111467293 PE... [more]
A0A6J1HSC25.6e-5697.3260S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111466132 PE... [more]
BLAST of Sed0010487 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07070.16.1e-5585.71Ribosomal protein L35Ae family protein [more]
AT1G74270.16.1e-5586.61Ribosomal protein L35Ae family protein [more]
AT1G41880.16.8e-5487.39Ribosomal protein L35Ae family protein [more]
AT3G55750.18.8e-5486.49Ribosomal protein L35Ae family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038661Ribosomal protein L35A superfamilyGENE3D2.40.10.190translation elongation factor selb, chain A, domain 4coord: 6..112
e-value: 1.1E-50
score: 172.1
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 12..106
e-value: 2.9E-43
score: 146.0
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 1..112
IPR001780Ribosomal protein L35AHAMAPMF_00573Ribosomal_L35Aecoord: 14..106
score: 25.357141
NoneNo IPR availablePANTHERPTHR10902:SF23SUBFAMILY NOT NAMEDcoord: 1..112
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 74..95
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 12..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0010487.1Sed0010487.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
biological_process GO:0006412 translation
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005829 cytosol
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome