Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCAACGTTGAACTCTGGAATCGTTTTCTCTGAAGGTACAAAGATTGAATTGATTTCATTTTCGGTTCATTCATTCATGCGATTCGATTTTTCTTGAATTCATTGGTGATGTTTCGCAGACATAGCCGACGAAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGACTACTACGAGCCGATTTCAGCCATTGACGATGAAGAATCCGACGAAGCTGGATCGGAGGACGAAACCTACAGCTCCGATCCTCATTTGCATCTTTTACCTAACGGCTGCCATGTAGAGAATGCAGTTTCGTCTCTTAATCTGAACGATGATGTGGAGAGACGGTGCAGCGATGAGGAAGAGGAGGAGCGGAGGACAGAGGCTTCTGATTCGGAGATTAGAATGGCGTTTAGGGAGGATGAGGCGCGAAGGAACGCGCCGCTGTCGCCGGAAAATGCAACGAGGATCATGGAGGCCATGCGCGGGATCTCGTTTGGCGGATCCGTTCCAGATTGGACTCGGATTGTTTCTGAGGATCGTTGGAATGATCAGCTGCGAAGGCTCAGGCAAACGCCTAACTCTCTCAATAATTTCTGA
mRNA sequence
ATGAACGCAACGTTGAACTCTGGAATCGTTTTCTCTGAAGACATAGCCGACGAAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGACTACTACGAGCCGATTTCAGCCATTGACGATGAAGAATCCGACGAAGCTGGATCGGAGGACGAAACCTACAGCTCCGATCCTCATTTGCATCTTTTACCTAACGGCTGCCATGTAGAGAATGCAGTTTCGTCTCTTAATCTGAACGATGATGTGGAGAGACGGTGCAGCGATGAGGAAGAGGAGGAGCGGAGGACAGAGGCTTCTGATTCGGAGATTAGAATGGCGTTTAGGGAGGATGAGGCGCGAAGGAACGCGCCGCTGTCGCCGGAAAATGCAACGAGGATCATGGAGGCCATGCGCGGGATCTCGTTTGGCGGATCCGTTCCAGATTGGACTCGGATTGTTTCTGAGGATCGTTGGAATGATCAGCTGCGAAGGCTCAGGCAAACGCCTAACTCTCTCAATAATTTCTGA
Coding sequence (CDS)
ATGAACGCAACGTTGAACTCTGGAATCGTTTTCTCTGAAGACATAGCCGACGAAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGACTACTACGAGCCGATTTCAGCCATTGACGATGAAGAATCCGACGAAGCTGGATCGGAGGACGAAACCTACAGCTCCGATCCTCATTTGCATCTTTTACCTAACGGCTGCCATGTAGAGAATGCAGTTTCGTCTCTTAATCTGAACGATGATGTGGAGAGACGGTGCAGCGATGAGGAAGAGGAGGAGCGGAGGACAGAGGCTTCTGATTCGGAGATTAGAATGGCGTTTAGGGAGGATGAGGCGCGAAGGAACGCGCCGCTGTCGCCGGAAAATGCAACGAGGATCATGGAGGCCATGCGCGGGATCTCGTTTGGCGGATCCGTTCCAGATTGGACTCGGATTGTTTCTGAGGATCGTTGGAATGATCAGCTGCGAAGGCTCAGGCAAACGCCTAACTCTCTCAATAATTTCTGA
Protein sequence
MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLHLLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPENATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTPNSLNNF
Homology
BLAST of Sed0010409 vs. NCBI nr
Match:
XP_022970483.1 (uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970485.1 uncharacterized protein LOC111469451 [Cucurbita maxima])
HSP 1 Score: 282.0 bits (720), Expect = 3.5e-72
Identity = 149/167 (89.22%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLH 60
MNA+LNSG+VFSEDIAD SDSDTNSAEGSDYYEPISAID EESDEAGS+DETYSSD HLH
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDETYSSDTHLH 60
Query: 61 LLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPE 120
LPNGC VENAVSSL+LNDDVERRCSDEEEEE EASDS IRMAFREDE RRNAPLSPE
Sbjct: 61 HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTPNSLNNF 168
NATRIMEAMRGISFGGS PDWTRIVSEDRW DQLRRLRQTP S NNF
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNF 167
BLAST of Sed0010409 vs. NCBI nr
Match:
XP_022964640.1 (uncharacterized protein LOC111464656 [Cucurbita moschata])
HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 148/167 (88.62%), Postives = 152/167 (91.02%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLH 60
MNA+LNSG+VFSEDIAD SDSDTNSAEGSDYYEPISAID EESDEAGS+DE YSSD HLH
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60
Query: 61 LLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPE 120
LPNGC VENAVSSL+LNDDVERRCSDEEEEE EASDS IRMAFREDE RRNAPLSPE
Sbjct: 61 HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTPNSLNNF 168
NATRIMEAMRGISFGGS PDWTRIVSEDRW DQLRRLRQTP S NNF
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNF 167
BLAST of Sed0010409 vs. NCBI nr
Match:
XP_038894769.1 (uncharacterized protein LOC120083197 [Benincasa hispida])
HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 148/167 (88.62%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLH 60
MNATLNSGIVFSE+IAD SDSDTNSAEGSDYYEPISAID EESDEAGSE+ETYSSDPH H
Sbjct: 1 MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSENETYSSDPHFH 60
Query: 61 LLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPE 120
L NGC VENAVSSL+LNDDVERRCSD+EEEER EASDS IRMAFREDE RRNAPLSPE
Sbjct: 61 HLSNGCGVENAVSSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTPNSLNNF 168
NATRIMEAMRGISFGGS PDWTRIVSEDRW DQLRRLRQTP+ NNF
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNF 167
BLAST of Sed0010409 vs. NCBI nr
Match:
XP_023520169.1 (uncharacterized protein LOC111783470 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 271.6 bits (693), Expect = 4.7e-69
Identity = 147/168 (87.50%), Postives = 151/168 (89.88%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDE-AGSEDETYSSDPHL 60
MNA+LNSG+VFSEDIAD SDSDTNSAEGSDYYEPIS ID EESDE AGS+DETYSSD HL
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
Query: 61 HLLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSP 120
H LPNG VENAVSSL+LNDDVERRCSDEEEEE EASDS IRMAFREDE RRNAPLSP
Sbjct: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTPNSLNNF 168
ENATRIMEAMRGISFGGS PDWTRIVSEDRW DQLRRLRQTP S NNF
Sbjct: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNF 168
BLAST of Sed0010409 vs. NCBI nr
Match:
XP_008457323.1 (PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo])
HSP 1 Score: 269.2 bits (687), Expect = 2.3e-68
Identity = 146/169 (86.39%), Postives = 148/169 (87.57%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLH 60
MNATLNSGIVFSEDI D SDSDTNSAEGSDYYEPISAID EESD A SEDETYSSD H H
Sbjct: 1 MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFH 60
Query: 61 LLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPE 120
LPNGC VENAVSSL LNDDVERRCSD+EEEER EASDS IRMAFREDE RRNAPLSPE
Sbjct: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTP---NSLNN 167
N TRIMEAMRGISFGGS PDWTRIVSEDRW DQLRRLRQTP NS+ N
Sbjct: 121 NTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169
BLAST of Sed0010409 vs. ExPASy TrEMBL
Match:
A0A6J1I3Z1 (uncharacterized protein LOC111469451 OS=Cucurbita maxima OX=3661 GN=LOC111469451 PE=4 SV=1)
HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 149/167 (89.22%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLH 60
MNA+LNSG+VFSEDIAD SDSDTNSAEGSDYYEPISAID EESDEAGS+DETYSSD HLH
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDETYSSDTHLH 60
Query: 61 LLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPE 120
LPNGC VENAVSSL+LNDDVERRCSDEEEEE EASDS IRMAFREDE RRNAPLSPE
Sbjct: 61 HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTPNSLNNF 168
NATRIMEAMRGISFGGS PDWTRIVSEDRW DQLRRLRQTP S NNF
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNF 167
BLAST of Sed0010409 vs. ExPASy TrEMBL
Match:
A0A6J1HLE1 (uncharacterized protein LOC111464656 OS=Cucurbita moschata OX=3662 GN=LOC111464656 PE=4 SV=1)
HSP 1 Score: 279.6 bits (714), Expect = 8.3e-72
Identity = 148/167 (88.62%), Postives = 152/167 (91.02%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLH 60
MNA+LNSG+VFSEDIAD SDSDTNSAEGSDYYEPISAID EESDEAGS+DE YSSD HLH
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60
Query: 61 LLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPE 120
LPNGC VENAVSSL+LNDDVERRCSDEEEEE EASDS IRMAFREDE RRNAPLSPE
Sbjct: 61 HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTPNSLNNF 168
NATRIMEAMRGISFGGS PDWTRIVSEDRW DQLRRLRQTP S NNF
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNF 167
BLAST of Sed0010409 vs. ExPASy TrEMBL
Match:
A0A1S3C5C0 (uncharacterized protein LOC103497044 OS=Cucumis melo OX=3656 GN=LOC103497044 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 146/169 (86.39%), Postives = 148/169 (87.57%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLH 60
MNATLNSGIVFSEDI D SDSDTNSAEGSDYYEPISAID EESD A SEDETYSSD H H
Sbjct: 1 MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFH 60
Query: 61 LLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPE 120
LPNGC VENAVSSL LNDDVERRCSD+EEEER EASDS IRMAFREDE RRNAPLSPE
Sbjct: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTP---NSLNN 167
N TRIMEAMRGISFGGS PDWTRIVSEDRW DQLRRLRQTP NS+ N
Sbjct: 121 NTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169
BLAST of Sed0010409 vs. ExPASy TrEMBL
Match:
A0A0A0LXQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533510 PE=4 SV=1)
HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68
Identity = 146/169 (86.39%), Postives = 148/169 (87.57%), Query Frame = 0
Query: 1 MNATLNSGIVFSEDIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLH 60
MNATLNSGIVF+EDIAD SDSDTNSAEGSDYYEPISAID EESD A SEDETYSSDPH H
Sbjct: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
Query: 61 LLPNGCHVENAVSSLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPE 120
LPNGC VENAVSSL LNDDVERRCSD+EEEER ASDS IRMAFREDE RRNAPLSPE
Sbjct: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NATRIMEAMRGISFGGSVPDWTRIVSEDRWNDQLRRLRQTP---NSLNN 167
N TRIMEAMRGISF GS PDWTRIVSEDRW DQLRRLRQTP NSL N
Sbjct: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
BLAST of Sed0010409 vs. ExPASy TrEMBL
Match:
A0A5A7UY79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00660 PE=4 SV=1)
HSP 1 Score: 245.4 bits (625), Expect = 1.7e-61
Identity = 133/156 (85.26%), Postives = 135/156 (86.54%), Query Frame = 0
Query: 14 DIADESDSDTNSAEGSDYYEPISAIDDEESDEAGSEDETYSSDPHLHLLPNGCHVENAVS 73
DI D SDSDTNSAEGSDYYEPISAID EESD A SEDETYSSD H H LPNGC VENAVS
Sbjct: 48 DIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFHQLPNGCGVENAVS 107
Query: 74 SLNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPENATRIMEAMRGIS 133
SL LNDDVERRCSD+EEEER EASDS IRMAFREDE RRNAPLSPEN TRIMEAMRGIS
Sbjct: 108 SLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGIS 167
Query: 134 FGGSVPDWTRIVSEDRWNDQLRRLRQTP---NSLNN 167
FGGS PDWTRIVSEDRW DQLRRLRQTP NS+ N
Sbjct: 168 FGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 203
BLAST of Sed0010409 vs. TAIR 10
Match:
AT1G07020.1 (unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 73/146 (50.00%), Postives = 93/146 (63.70%), Query Frame = 0
Query: 19 SDSDTNSAEGS-DYYEPISAIDDEESDEAGSEDETYSSDPHLHLLPNGCHVENA---VSS 78
SDSD+NS E S DYYEPISA+D S++ E+++Y L C + +A +SS
Sbjct: 9 SDSDSNSVEDSQDYYEPISAVDLYNSND--DEEDSYLPIGGDGLSNGHCMIPDAEVGISS 68
Query: 79 LNLNDDVERRCSDEEEEERRTEASDSEIRMAFREDEARRNAPLSPENATRIMEAMRGISF 138
+++ND+ + EEE TE + EIR AF EDE RR +PL ENA R+MEAMR ISF
Sbjct: 69 ISINDNT------DSEEETETE-TGPEIRRAFEEDERRRRSPLVEENAVRVMEAMRAISF 128
Query: 139 GGSVPDWTRIVSEDRWNDQLRRLRQT 161
G+ PDW V+EDRW DQLRRLR T
Sbjct: 129 PGTAPDWASDVNEDRWIDQLRRLRTT 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022970483.1 | 3.5e-72 | 89.22 | uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharac... | [more] |
XP_022964640.1 | 1.7e-71 | 88.62 | uncharacterized protein LOC111464656 [Cucurbita moschata] | [more] |
XP_038894769.1 | 1.7e-71 | 88.62 | uncharacterized protein LOC120083197 [Benincasa hispida] | [more] |
XP_023520169.1 | 4.7e-69 | 87.50 | uncharacterized protein LOC111783470 [Cucurbita pepo subsp. pepo] | [more] |
XP_008457323.1 | 2.3e-68 | 86.39 | PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1I3Z1 | 1.7e-72 | 89.22 | uncharacterized protein LOC111469451 OS=Cucurbita maxima OX=3661 GN=LOC111469451... | [more] |
A0A6J1HLE1 | 8.3e-72 | 88.62 | uncharacterized protein LOC111464656 OS=Cucurbita moschata OX=3662 GN=LOC1114646... | [more] |
A0A1S3C5C0 | 1.1e-68 | 86.39 | uncharacterized protein LOC103497044 OS=Cucumis melo OX=3656 GN=LOC103497044 PE=... | [more] |
A0A0A0LXQ6 | 2.5e-68 | 86.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533510 PE=4 SV=1 | [more] |
A0A5A7UY79 | 1.7e-61 | 85.26 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT1G07020.1 | 1.9e-23 | 50.00 | unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bac... | [more] |