Sed0010390 (gene) Chayote v1

Overview


Name	Sed0010390
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LOB domain-containing protein
Location	LG02: 46022558 .. 46041579 (+)
RNA-Seq Expression	Sed0010390
Synteny	Sed0010390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATCAAGAAGATCAAATCCCTCTCCGGAAACCCATCGGAAAGCGCGCCGCCGCCGCAGCCAACCGGCCGGAATCCGACTCCGGCTTTTCTCCTCCGACACCCTGCGGCGCGTGCAAGTTTCTGAGAAGGAAATGCATCAACGGCTGCATCTTCGCGCCGCACTTCGCCTCCGATCAAGGCGCTGCTCGCTTCGCCGCCGTGCATAAGGTTTTCGGAGCGAGTAATGTCTCTAAGCTTCTGCTGCATATTCCGGTCAGCCGCCGTAACGACGCCGTCGTCACCATTACCTATGAGGCTCAGGCGAGACTCTCCGATCCTGTCTATGGCTGCGTCTCAACTGTACTTGCCCTACAACAACAGGTCCTAATTTCTTTCTTTTTCTTTTTCTTTTCTCTTTAAAAAGTATTGATTTTATGAATAAAATGTAACGAATCGTGGAATTTATTTGAGATATTAGTTTCAGTTCTAAACAAAAGTTAGGGTTTGAATGATGTTCTGAGGATCCCTTGAAGAGACGCAAAGACCCATTTATACAAAACTTTTAAAATTGGACCCATTTTTATAATAAGTTTTAGAAAAGACCCAATTTGACAAATTATCCATCTATATAAAATATCTATTGAACTTTTTTTTTTTTTTGAAAAGGAAATATCTATTGAACTTTTTTTTTTTTGAGAAACAATATCTATTGAACTTAAGTTGGCGTTTTTCAGGTGAAATCATAGATTAATAACTTGGTAAATGTGCTGTTATTTCTCACGCATAAAATATTTGGTACAAGAAAGAACCATACTTTAATCGGTATAAACTAAAAAAAAAAAAGATTTTGCATGTATAATAAAAAATGTAAAATATTTTCATATGCACAAAATCAAAACTAATTTATTTGTAGAAGAAAATTCAAATTGAGGTTTAACATACATGAAATTAAATTACTGATAGAAAATCATGTGTTATGAAAATTATTTTAGAAATTGTGCAAAAAAATCATGAATTTAAATCTTTCATCAATTATTGTTAGAACTAAAAAAAATTCAAAAATAAAAAGTTTCAACTAAAGAAACATTAATTGATAAAATAAAGCTAATAAAATGATAATGAACAACTCCTAAATATAGGAATTAAATTAACATTAGGGTTAGAACTCTTAATAGATTAGGGTTTAGAAAAATACGATCTAAGAACATAATCTAAACATTTTAAAATTGTTAAGAAATTTTTTCAAGAAGAGGTACTTGTATTAAAGGTAGGCCAGAAGCAAAAACACAAAAATCAGAGAAAATTGTTTTTAAAAAAATAATCATTAGTTATAAATTGTATGTTAAATTACAAGTTTAAATAATATATATATATAAATTGTGTTTATTTGGTTGATAACTTAAAAAAAATTTATCTAGAGTTCCAAACTTTTGATTTTATTCTAATAGGCTACCAACATGTTCGTTTAAAAAAAAAATACACATTCATAAATGAGATTTAATGTTTGATGTGATCTAAGCTTTGTAACTTTGTGTCTAGTAGTTTGTGGAATTCAAAAGTTTTCATATAGATCAATAAGACCTTATTAGATACAATTAATATTGATAATGGAAATTTTATGGAATAATTGAAAAATTAAGAACTTAATAATCCTATTTTAAAGTTACATCTTTTAAAAATTGAAAACTCAATTAATAAAGGTGAAAGTACATCAGCTAAGGCATTGTTCGATAACTATTTTATTTTTTGTATTTAGTTTTTAAAATTTAAACTTATTTTTTACTCAAAATTCCTAAAATGTATTCTATTTTCCTTACAACATATCTATCTTAAAAAGTATGTGAATTGCTAACCAAATTTTTAAAACAAAAATAAATTTTTGGAAGTTACTTTTTTTTGTTTCTAAATTTTAGTTTTGCTTCAAAAAAATATAGGTTAGATGTAGGCATTCAAGTAAGGAAAACTATACAATGTAGTTGTTGTATGCTTAAATTTCAAAAATCAAAAACAAAAAATAAAATAATTATCAAACGAGACCTAAATTTGTGACTTCTTGATTACATGTATTTTTTTTCTGTTAAGTTACTTTCATGTTTAGATACATAAATTTATTAACATAAAGGCTTTTCTCAAAAGATAATTACCAAAAAGAACATCTCATGCAAGCTTCTTGAATTTCAGTACTAGTATTTATATTTTATACATTAAGATCTTTTATATTTGATTGGCAATGGTTACTAACAAAGTAGGAAAATGAATCTCTTTCAAAAAAAAAAGTAGGAAAATGAATGTTGTATTTATACATTAAGATCTTATATCTCTTTTTTTTTTATATATATATGAAACAATTTCATTGATTCGTGAAATTACAATATAAGATAATAGACTACATAAGATTAGATAAACAATCTCCAGTAGTTAATTAGTACATCAAAACTATAAGAAGAAAAAAGAGGGTTAAGTTTACACGAAGATATAACTTGCAAAGTAATGGTGTAAAAAAAACTTGGGTAGGAAGAGCATTTGTCTTAGAAAATCCTCTTGTTCCTTTCCAACCACATGTTCCAAGAAAAAGCCCGGATAAAGTGCTCCCAAAGTAATTTCTTTTCCTTCTTGAAAGGGTGACCAAGTAGAGCAGATTGAAGCAAAAGATTGGGTTCGGTATGGAGAGTAAAAGGCCATCTGAAGATGCTTTTAAGATAATTCCAAAACAATGTGGCATAAGTACAATTGTTGAAAAGATGCGAGCAAGATTCAGAAACCTCCCTACAAATAGTGCACCACTATGGAGAGATGTATCGGTTGGCAAGTCTCCTTTGCAATTTGTTGTGCATCAATAGCGCCCCATGTGATAGCTCCCATAAGAAAAATTTAATTTTCTTTGGGTATTTCTCCTTCCAGATTGCATCATAAAGCAAATAAGAATTATCAAATGGGCTAATAGATAATGACTTCACCAGAGATCAAACTGTAAAAAGACCAGCTGGTTCGGCCCTCCAAACTGCAACGTCAACACCTTCCTCAAGCTGCACAGAGTTGATCTTGTAGGATAAAGAGCAGTATTCATCAATTTCTTCCTCCTTTAAATTCCTTCTAAGCCCAAGATTCCACGTTTGATTTTCATGATCCCAAAGAGAATTAATCACTCTCTCTTTGTGCTTAGACAAGGAATATATCAGGGGAAAAAGTTGGGCCAATGGTGCCTCGTGGATCCATACATCTTCCCAAAAACGAACATCCATTCCATTATTCACAATAAACGACAAACTATCAAGAACCAGATTTTTTATAGATAAAATAGTTCTCCATGGACCTTTAAAAGGTTTCCTAATGTTCGGTCCAGGCCTGAAGATACTATTAGCTTGTCCGAATTTAGCATCAATCAGTCTTTTCCAAAGTGCCTCTCGTTCATTCCTATATCTCCAAATCCATTTTGATAGGAGAGCCTCGTTCTTGATCTTCATATTGGTAATCTTCAAGCCTCCGTGGTCATGGGGAAGGGAAACAGTTTTCCAGTTAATAAGATGGAGCCCCGTGTTATCACTGTTACCTTTCCAAAGGAAGTTTCCTAGCAATCTTTCAAGATGATGAATGGCTTTACTAGGCATTTTGAATAAAGACATATAGTAAGTCGGAAGTTGACAAGTGTAGCATTGATCAAAGTGAGTTTTCCACCCTTTGAAATGTAGCTATTCTTCTAGGATGAAATCTTCTTCTCTATTTTCTCCAGCATAGGCTCCCAAAATGCAAAAGATTTTGGTCTACCATTTAAGGGAAGACCCAAGTAAGTCGATGGCCAAACATCCCTTTTGCAACCAAATTTCAAAGCGAGGCATTCCAGGCTCAAATCGTCAATATTAATCCCCAAGATTTCAGATTTAGAAACATTGATGGTCAATCCGGATGATCTCTCAAAATCATGCACTATCCTGAACAATTCCTCAATAGCATCAATGTCAAAACTAGAGAAAAGCAGAGTATCATAAGCAAACTGAAGATGACTGATGGATATGGGAGGAGAGCCAATTGTAAATCCTCTGATACAATTTTCATGTTCAGCCTGAGACAAAATTCTACTAAATCCATCAATAACCATAATAAACAGGAACGGGGAAAGAGGATCACCTTGACGAAGGCCTCTGGTCGTGCAGATTTTGCCTCTAGGTCTACCATTAATGATAATAGAAAAATTGGGAGAAGAAATGCACCCTCTCACCCACTTACGCCATCTAGTTCCAAAACCTTTGATACGAAGAATATCCTCCAAAAAGTCCCAATCAACCGTATCAAAAGCCTTTTCAATATCAAGTTTAATAACCACACCCCCGCTTCTTTTTATAATGTCATTCATCAATCAATTCGTTAGCAATAAGAATGGGGTCAAGAATCTGTCTACCTTCCACAGATACTGACTTATATTCGGAGATAGTAAATGGAAGGACTTTCTTAAGCCTTTGTGAAAGAACTCTAGCAATAATTTTATACATAACAGATGTGAGGCTTATAGGCCGATAATCGCTGACCCTTCTAGCATCCACTTTCTTGGGGATCAAACAAATGTATGTCTCATTAAGGCTAGCATTTATAATGCCATTCTTAAAAAAACTCTTGGAACACTCTCAATATATCGGGCTTAAGGGTGTTCCAAGATTTTTTAAAGAATTCTGCAGTAAAACATCAGGACCAGGTGTTTTATTAGTGCCCAGATTACACACAGCCTCCCAAATCTCAGTTTCAGTAAAAGGGGCCTCAATAGAGAGAGCTTGAACATTGGTGATCGGACTCTAATCAAGATGTAAAGGAATAGCCGGTAACTGTAAACTTTTGGTGTAGAGTTTTTCATAGAAAGTGATAAATTCTCCTTCAATCTCAGCATCGGAAGTAAGGCTAATACCATTAGAAGAAAGGATTTCGACAATCGAGCTCTTCCTTCTTCTTGTCGCAACAATATGGTGGAAAAGTTTTGTTTTCTCATCGCCATGCTCAAGCCATAATGATTTACAACATTGCTTCCACAATGATTCCTCTTGAATAGCAATAGACAGAAGTTGCGATTTGATCGAGGTTCTTTGTTGGATTTGTACCAATTGAAGTTGACCAGTTTCTTCCAAATCGTCAAGAATTGCCAATTCAAAAGCTAGCTGTTATTTCTTGACTGTGTTGTTTCCGAAAGTCATCTTGTTCCATTCTTTAAGAACCAACTTGAGATTCTTAAGCTTTTTAATAAAACCATGCCCCAGCCAACCCGTCAGAGGATTGTTGTTCCACCATTCACCCAACAAGGCTTGAAATTCGGGATGTTGAAGCCACATATTATGGAATCGGAATGGAGTGGAACCCCATCTCTGATTGCCAATGGATAGTAACAAAGGATAATGATCAGAAGTATGTCTTTCAATTATTCTCCCAACTAACTCCTTAAAATGGTCCATATACTCCATCGAAACCAAGAATTTATCAAGTTTGGATAGAGTAGGGGGGATCTAAAGTCAGACCAAGTAAATAAACCATTGCCTAGAGGGATATCAGTCAAAGAAAATTTGTCAATGAAAGAGTTGAATCTCCTCATATCAGGAGAGGGTGCACTCATACTAGATCTCTCGTGCGCCCATCTGGTCGTGTTAAAATCCCCGCAGAGAATCCATCTGTTTCCACATTCATCAGCCAATTTATGGAGCTCTTCCCAGAACTCAGGAGATGGGTCAGTGGCAGATGGACCGTAAATGCCTGATAACCAAAAGTGGAAACCACCAGCCATAGTAATAAGAATAGATAAGGAGTACCTTCCTTTTTTAATGTTAGAAACCGAGATAGAGGGATCGTTCCACATAATAATCTGCCCCCCAGATGCTCCCAAAGAGTCAGAAGCAGTCCAAGCCACATCTCTGGAGCTCCAAATGGACTTAATGAAGCTACGGTCAATATTACTGGACTTTGTTTCTTGGAAAATGACCACTGTTGGGTTGTGTTTCAAAATAGTACTCTTGACAATGGCTCTTTTCTCTTTACAACAAATACCTCTAACATTCCAAGTGATGTATATCATGATGAATAATTCAGCCCGCCCTGCTCCATCTCATTTAGAGAATGGTCATAGGTCACATCGAAGATAGATTTAGAATCTCCATGTAAGCGCTATTCTTCTTTTGAACTTCCCTCATCTGTTTTGTAATCTTTGTCGGAAGAGGGAGGATGTCCAATCACATTGTCCTAAACCATGGAATGATCACTCCCAAATAGGTCGATGGATGAACATTGGGATCCAGGTTGGATCGGTGGTTCGAGTAGTAAGCATTGGTCTCTTTCGAGGGGAAAAATTGGTATGTCTGGGATGGGTAGGCTATTTGTATAGGGGGTGGTTCAGGAGAAAGAGGAGGGGATGTAAGGGACCGACCCGAATGGGGCACTAAATGGGCCCTTACCCCAATGCATGCATTCAAAATAAAGGACATTTAAACAGACATGATTTCGGATTCCAATTAAAACAAAACATTCAAAATAACCTCTTTAAAAACTAGACATTTTCCTGAAAACACGTGTCCTGTTTCCAAGCACTTCGGGATAAATAAATTTCCAAAGTTTACTCGATCGAGAGATTTACTAAAAGCCATTCAAAACTGTTTAGATACAACACATGCTGGAATCCACAAATATTTACAAACATCCTAGGGCTTCGTGCCTTGCTACATGCATTCTGGGGAAAACAAAAACACACGAGAGTCATAATACAAAAATCGAGTTGGAAGAGCTGGGCCCCATGATCACGGCTCCTCCTTGAGCATCCTGTCGCGCACCATTTGTTACTGTGGAAAACCACAGAATAAGGGTGAGTAACGAATTACTCGGTAAGAATCCCCAACCGGTACAATACGATAAACATGGTCATCCCGATGAGCGTATGCAAGCTATGAATATAAACACAGAATAGAGCACATAGCTTAGCCCACACTTGGGCCTCGGATGCCAACTCGGTGGCTTAGTCAGGAATAAAATCATCACACGATCCAATACATAAGTCGCCCTATACGAGAAACAAGTCTCGGCCTCGGCGCTCTCATCGTCGACGAAAGGTACACCGGCTCAAGATCCCGAGGAGCTCTCGGTCGTATTTGTAATGAGCGTAAACATGCACCGCGTGCTCTGCAGAACCATGGGGTGCGGGTCAGAGGCAAGCGCCCATGTCCGATCCACCACGCCTAACTAAATCTTTGGATCGGTGTCACCGACATAGGGGTGTGAGACACGGACACTTAAACTATGTCACTGAACCACCGCACTGAGGCTAAGGGAGCGGGTCGTGGTAGGCTTACACCGTGAAGCCGCCCTTACCTTAATAGGTGGCAATCGGGGGCTACGGCCGAACACGCCGACGGGCGTGCCGACTATCGAGGACAAGGCAATGCCAAGTCATCATCCCGACGGTTGGGGCATTTAACGAGTACCGCCACCTCACCCAAGATTGCGGGGCCTACCGCTCGGGTTAGCAAATCCCTCACGGGGTCGGGGGCGGAATGACTTGCTCGGCGCCCCCGCCATGGATGCAAGGTACTTTATGCATCGGCCGGATGATGCTATCTACCGCAACTCTAACACCGCCACGAGCAAGCAAAGCAAACAATTCCATAAAATCCAATACGTGCTCAATAAGAATACAACGAGCCTAGCATGATACTACGAAGCAAGGAGCAGATACGAGCAGCATGAGAAAGGAACAACCTAGCATGGATTAACATGAGAATTAACCAAGAAATCATGCTAAGGGAATTCAGATTGAAGCACCTAGCTACACATGTTAATAATCACAAACAAGCAATCATTCAACAATCACATATAATATCGCGAGGTCCACACAACCCGGTAAGAAATCCTTACCTTGGTAGGGGACGGTTTGTACGAAATCCTAAGTCGCGAACAATCTCGATCTAGCTACAGGGAACCTATCAATCATCACAATAATCACACAATAGGCCTAAATATAATAAAACAAACAAGGCTCGGCTCGGGAGCAACTCACGAGGCACACAGCGAACGCACGAAACAGCCGATTGCAGCGAAGGGCGCAATAGGGCTTCTTGGGCGCTGGCTGGCGCGCGGAGGGTCAAGCGCGCGCGCTGAGCGAGGCAGGCTGGCTGCGCGCTGGCGGAGCAGGGGGAACAGGGCGGCGAGGCAGCTCGGGCGGCGACGTTGCGAAGTAGGCGGCCAGGCGCGCGTATGCGACGGACGGACTGTTGGCGAGCTCGACGAAGTCGCGGCGTGGCTCGGTGGTGGGGCGCTGCTGCCTGCAGCGTCGACGGCGGCGAAGCAACAGGCAAACAGAGCATGAAGAAGACGAGCTCGATTCGGCGATTGGAGAAGATTCGACGTACGATTCTTTGAAGAAGAACTCCCTACACTATTGCACAAAACCCATACTTCAAATCGCCTCAACTCGGCCGATGAACGGAATCGAAACTAGGGAGAAGAAATGGATTCGGAGGAGAAGGAAAAGAGAAGAGAAGAGAAAGGAAAGCTTCTGGGAGGGAGACGAGCGGCGAGGAGCTCCGTGAGTCGAGGTCGGCGTGGGGAAGAAGAATTCGCGAGAAAAATCCGATCGGTCGGGGTGATCGCGAGAAGAAGAAGAAGAAGAAAGGTGGGGCGGCTCGGCGAGTGCCTCTTAAAGAAAAACAGGGGACAGACAAGCATACATAGAAGATGGCGCGTTTAGAAGCACAAGAGCGCTCGGTGGCTCGATTGGCGGCGACCCGCCTAGCATGCGACACGGCCCTGGTTCGATTCTTGCTCGACGCGCTATTTAATTCCCTATTTATTTTGCTCCTTCCCAAGCCCAAACGCCTTCACCAAAAATCCCGATCCTATTCAAATTGACTCGAATTATTCCGGCAATTTTAAATTTCAAAATCGGCCCGACCCAAAATTACCAAAATGCCCCCTGGCCTCTCAGGAAGGCCGGGATGAATTTTAGGGCCGTTACAATACTCCCCCTTACAAGACTTTCGTCCTCGAAAGTCACTTACGCATCGAGCGGCTCGGGATATCGCAATCTCATCTCATCCTCCCGTTCCCAAGTGGCTTCCTCTAAACTCGACTTCTCCACGTAACCTTTACGGTTTGATTTCACGACACGCAGTGTCTTTGTCTCAAAGGCAAGAATTCCCACTGGCTTTTCCTCAAGCTCAAATCCTCATTCACCGCAAAGGCTCAAAATCCACAATGTGCGACGGTCCGCGACGCATCGCCTCAACATCGATACATGAAATACACCGCGGCAATCACGACAATGACGGAGGCAAGGCTAATCGATAAGCAACCGCCGATCCTCTCCGGATTTCAAGCGGACCAACAAAAGCGGGGACTCGGCTTCCCACGCTTGCCAAACCTCAAAACTCCTCGCATTGGTGCGACCTTCAGAATACATGCCGACCAACCTCAAACTCCAAATCCCCGGCGTCGAACATCGGCATAACTCTTCCACATGCGCTGCGAAATTTTGTCAACATACGGGCTCTAATCTTCTCGCGACGGCATCATTGGTTAATTGCGGCAACTCGGGACCCAAAACACGCCTATCACCAACCTCTTCCTGAACACGGGAGATCGGCAACGCTTACCATACAAAGCCTCGAATGGAGCCATCCGATAAATCGATCGATAATCGTTGTTATATGCAAACTCCATCGATCTGAATCTGGTCCCAAATGCGGAAATCCAACACACAAGCCCTCAACATATCTTGAGAATCGGTTCACCCTCTCGGATCGACCATCGGCCCGAGGGTGAAAAAAGTCTTTGAAGCCGCACTCGCACTCGGTGCCTAAACCCTTACGGAGCGCTCTCCGTAAACGAAGTGAACCTCGAATCACGGTCCGATACAATCCTCACGGGCACCCCGTGATAGCGAACAATCTGCTCAAAAGCATTTGCGCCCACTGTTCCACGGTATAAAGTGTCTACAGGGAATGAAGTGCGCGCTCTTAGTCAAACGGTCAACTATCACCCGGATTCGAGTGAACTTCCTGAGTCCTCGGCAAACCCGAAATGAAGTCCATGGAGATTTCTTCCCATTTCCATCGAGGCACACTCGGCCGTGCGCAATAATCATTTGGTCTCTGCACGGGTGCCTTCACTGGCGACAAGTGAGACATCGGTGACAAACTCCGCAACATCTCTTTTCATACCCATCCACCGAATGTTCGCTAAGATCTCGATACATCTTGGTACCCCGGGGTGCCAAGCAAAACGGAGAGTGGGCCTCTCGAGAGCAACTCGCTCGCAAACTCCGCAACATCCGGAACACACATCCGGCCTCGAACGTCACCCCTTTATGCGGTGAATATACAAAATCAAAGTCGCCGTCAACACCGACTCTGTCAACCAACCTCTTAAGTGCGTGGTCACTCGGTGACTATCAATAATCCACGCCTAATCGATGGTTGATCATCAACCGAGCTACTCGCAAGAACCTCACCCAAAGAATATCGCAATCTCGGCCCGCTCGAACTCTCTCGCAACTGGGTGGGAACTCAGCGATACAAGCAGAGTGCGGCGTCTTTCTACTTAATGCATCGGCTATAACGTTGGCTTTACCGGATGGTACAGAATCTCGCAATCATAATCTTTCACTAGCTCTAACCATCTCCTCGCCTCATGTTCAACTCTTTTGGGTAAGCAGATACTTGAGGCTCGGTGATCGGTAAACATCCGAATCCGCTCACCGTATAGATAATGCCTCCAAATCTTGATGCAAACACCATGCGCCGCCAACTCCATATCATGAGTCGGATAGTTCTCGCTCATATGGCTTCGGTGACGGGAAGCATAAGCAATGACCTTCCCGTCTTTGCATCAACACACAACCCAACCCGAACTTGGAAGCATCGCTATAAACCACGAAACCACTGTCCCTCCGGATCGCCAACATCGGGCCAAGTCAAATCAAGCTGCGCTTGAGCACGGCAAAGCTCTCATCACACCTACCGTCCCAAACAAACTCGACACCCTTCCTCGTCAGACGAGTGAGGGGCGAGGCTATGGCGGAAAAATCCTTAACAAACCGAGCGGTAGTAAACCGCCAAACCTAGGAAAGCTGCGTATCTTGGTAAGCCGAAGTCGGCCGCCCACGAACTCACGGCCTCAATCTTTGCAGGATCCACGGCTATACCATCTCTCGAGACTATATGACCTAAGAAGGCCACTTGTTCCAAACGGAACTCACATTTGGAAAATTTCGCATAAAGTGGTTTTCCCTCAAGGTCATCAACACTTTCCTCAAATGCTCATGATGATCCTTCTCGGTCCTTGAATAGATCGAATATCGTCAATGAACACAATGACGAAGGTGTCCAAAAATGCTTTGAACACCCTATCCATCATGTCCATGAACGCCTTTGGTGCATTCGTCAATCCAAACGACATGACCCCAAACTCGTAGTGCCCATATCTAGACACGAACGCATTTGTCTTAGGAATGTCGGCGCCCCTAATCGCAGAATGGTGATACCCGGATCTCAAATCTATCTTGGAGAACACGGAAGCTCCTCGAAGGCGATCGAACAAATCATCGATACGGGGCAACAGATATTTATTCTTCACGATCACCTTATTAAGCTCACGATAGTCAATGCATAGGCGCATCGAACCATCCTTTTTCTTCACAAACAACATCGGCGCGCCCCACGGGGACACACTCGGACGGATGAATCCTCGATCTAACATCTCCTGCTGGTGAACCTTCGCCTTTAGCTCGGTGGCGCCATACGATCACGGAGCCTTCGAGATAGGGAGGGTCCCGGCTCGAGCTCAATTGTGAAGTCAACTCTCTCTCTTGGGGCAACCCGGTAATTCCCTCGAGGAACACGTCGGCAAACTCCCGCACAACCGCGGCACTTGATCAACGATCGGTGAGGATGGCTCTCTCCGGACAATTTGGCTAGGTAGCCCCAAGCTCCATGAGCTAGCAAGCGACGGGCTTTCACGGTGACACCATCGGCGGGCAAACTCCACCTGAACTCCACGAAACTTGAAGTTTGGGCGACCCCCGGCACCGAACACTACTTCCTTCCGGTGGCGGTCAATCAATGCGTGGTTAGCGGCTAACCACTCCATACCAAGGATCACATCGAAACCACTCATGGGTAGAACTATGAGCGTAGCCACCAAGAACTCTCTCCGGATATCTCGATCCGGCCATCCTTAATCTTATCTTTAGCTAACATATTAACTCCCGAAGAGAGCAGCAGATAATTCAAAACCTAGAGGCTCTAATCTCAACTTAGCATGCTCAAGCCAAACAAAACATATACAAATGAGTGCGTAGGGCAGTCAAACAAGACAAATGCACAATGATCCAAAACAAGAAGCGTACACGCCGCTGCGCATCCGCGACGCTCGGCCTCGACGGTTCAGTAGCGAACACCCGCCTGCTGCTGCTTTGCCAGACAGTGAATCGCCATAGTTGGTGATCGCGAAAACGGATCGTATGACCCTCTCTTCCACATCATCGAAACACCGCTGGCCCGGTCGACAAACTCAAAGTGGACTCTTCCACAAGTGGCACAGGCGGGAACTCGCCTCGGACCGCCTGCGGCGAGGCTGAGGCTCGGGCCGGCATCCTACGCCGATCCGGTTGCGGAACTCCCTGGCGGCGCTGGCGCCCCTCGAACTCAAACCTCCTCTTACGCCCCACTACTGGGTGGGACAGGGCCAGCGGCACCGGGCGGCGCCCGCCCGCTCGGCAGGATATTTCCCATTGTAAATAGTGGCCGGTGAACCGCTTTAGCATAAGTGATAGGGGCGAGGGCTCGACATCCGAGACACACCCGCCTCGGACAGAAATGAACTTTCGAATTTTCAACTCGAGGGTCGCTATCAATTGCGAGCAAAATAGCCATACTCAGAAAACTTCCTTTCGTATTCCTCAATAGAATCGAACCCTGCTGCAGATTACGGAAAAGCGCTACCATCTTCTCTTGAGCCTCATCGCTAATATATTTGACCACGAACTCCGACTTAAAGAACTCCCGGGTGGCGGGTGGAGACCCGGTGGTCTCTCACTCAAGGTGGACTCCCACCACCATCTAGCTACGCCCCTAACGCATGGGTCGCACACCTCGGCCTCTGCACATCGGGGCACACCATAATCGGGAAGGTGTACTCCAAATGGGCAATCCATCATTTCTGCCGATAAAGCGTCACCGTGGCGTCAAACTTATCGTGGTTCCACTTTACGAAGTCCTTCAACCATTTACCAAGTTCGCCGGCACCTTACGCCACTACGCCTCAAAGGTGCTGGCTCTGCGGCTGGAGTCTTCTTTGCGCCTGTTGAAACAAACGGGTCACCGCTCGATCCGAGCTCGGGACTCTCCCATTGTCTTTGCCAATAAAGCTCGGGGTCGCGCCTCCGCCACTCAACAGTCAACCACCATAGACCTCATGGAATTAGCAAATTCTGCTCCGAGAAGCGATCTCACGGCGCCCGATCGCCTCAATGCCTACTACGGCCTCAGCGGGGAGCTACAAAGCGGAATGCTATCCGTCGCACTGGGGACGATGTCCTGCGGTGTCGATCCGATCCCGACACCTCGGCCTCTTCTCGGGCGTCCTCTTCCCGGCAGGGTAAGCGGCATCTTTGGCGATCTACACCCAAACCAATAACGAGTCAGAACATGCTCGTCTCCGCTCCACAATACTACACAAGGCATACACTAGATGACAGGTATTGTAAATTCTTAACCCTTTTTAAACAACAAAAAATAAACTTAGGCGTGCACTGATGACCGCTTGAGAGTGCTAGTGATCATGGGAAAACGACCTACAACAACAGTCGTACTACTGTAATTTATGACTCTAAGCTCGATACCAAGCGTAAGGGACCGACCGAATGGGGCACTAAATGGGCCCTTACCCCAATGCATGCATTCAAAATAAAGGACATTTAAGCAGACATGATTTCTGATTCCAATTAAAACAAAACATTCAAAATAACCTCTTTAAAAACTAGACATTTTCCCTGAAACCTGTCCCTGTTTCCAAGCACCTGTTCCAGGATAAATAAATTTCCAAAGTTTACTCTGATCAGAGATTTACTAAAAGCCATTCAAAACCTGTTTAGATACAACATGCTGGAATCCACAAATATTTACAAACATCCTAGGGCTTCGTGCCCAGCTACATGCATTCAGGGAAAACAAAAACACACGAGAGTCATAATACAAAAATCGAGTTGGAAGACTGGGCCCCATGATCACGGCTCCTCCTTCGGGCATCCTGTCGCGCACCACCATTTTGCACTGTGGAAAACCACGAGAATAAGGGTGAGTAACGAATTACTCAGTAAGAATCCCCAACCGGGGTACAATACGATAAACATGGTCATCCCGATGAGCGTATGCAAGCTATGAATATAACACAGAATAGAGCACATAGCTTAGCCCACACTTGGGCCTCGGATGCCAACTCGGTGGCTTAGTCCGGAATAAAATCATCACACAGTCCAATACATAAGTCGCCCTATACGAGAAACAAGTCTCGGCCTCGGCATCTCATCGTCGACGAAAGGTACATCGGCTCAAGATCCCGAGGAGCTCTCGGTCGGCGTTTGTAATGAGCGTAAACATGCACCGCGTGCTCACGCGAGACCATGGGGTGCCGGGTCAGAGGCAAGCCGCCCATGTCCGTCACCACGCCTAACTAAATCTTTGGATCGGTGTCACCGACATAGGGGTGTGAGACACGGACACTTAAACTATGTCACTGAACCACCGCACTTTGAGGCTAAGGAGCGGGTCGTGGTAGGCTTACACGAGAAGCCGCCCTTACCTTAATAGGTGGCAATCGGGGCTACGGCCGAACACGCCGGGGCGTGCCGACTATCGAGGACAAGGCAATGCCAAGTCATCATCCCGACGGTTGGGGCATTTAACGATCGCCACCCTCACCCAAGATTGCGGGGCCTACCGCTCGGGTTAGCAAATCCCTCACGGGGTCCAGGGGCGGAATGACTTGCTCGACGTCCCCGCCATGGATGCAAGGTACTTTATGCATCGGGCCGGATGATGCTATCTACCGCAACTCTAACTCCCATACGAGCAAACAAACAAACAATTCCATAAAATCCAATACGTGCTCAATAAGAATACAACGAGCCTAGCATGATACTACTAAGCAAGCAAAGCAGATACGAGCATGCGAGAAAGGAACAACCTAGCATGGATTAACATGAGAATTAACCAAGAAATCATGCTAACCGGGAATTCAGATTGAAGCACCTAGCTACACATGTTAATAATCACAAACAAGCAATCATTCAACAATCACATATAATATCGCAGGTCCACACAACCCCGGTAAGAAATCCTTACCTTGGTCGGGGACGGTTTGGCACGAAATCCTAAGTCGCGAACAATCTCGATCTAGCTACCGGGAACCTATCAATCATCACAATAATCACACAATAGGCCTAAATATAATAAAACAAACAAGGCTCGGCTCGGGGAGCAACTCACGAGGCACGCATTTAACGCACGAACGAGCCGATTACAGATTTAACGGCAAAGAATAGGCTTCTTTGGCGCTACTGGGCGCGAGGTCGGGCGCGCTGCGCGCGCTTGGCGCAGGCCGCTGCTTGGCGCAGGCTGCGGGGGCGGGTGGCGAGGCAGCTCGACGGCGGCAGCGTTGCTATGCTGGCGGGCGAGGCGCTGGCGCGTGACGGACGACGCACGTTGGCGAGCTCGACGAAGTCGCGGCGTGGCTCGGCGGGTGGTCGCTCGCTCACTTGCGCGTCGACGGCGAACAGGCAAACAGAGCATGAAGAAGACGAGCTCGATTCCGGCGATTGGAGAAGATTCGACGGCCGATTCTTTGAAGAAGAACTCCCCTACACTAGCTGCACAAAACCCATACTTCAAATCGCCTCAACTCGGCCGATGAACGGAATCGAAACTAGGGAGAAGAAATGGATTCGGAGGAGAAGGAAAAGAGAAGAGAAGAGAAAGGAAAGCTTACCGGAGGGAGACGAGCGACGAGGGAGCTCCGGAGAGTCGAGGTCGGCGTGGGGGAAGAAGAATTCGCGAGAAAAATCCAGTCGGTCGGGGGTGATCGCGAGGAAGAAGAAGAAGAAAGGTGGGGCGAAGCTCGGGCGAGCTGCCTCTTAAAGCAAAACAGGGGACAGACAAGCATACATAGAAGATGGCGCGTTTAGAAGCACAAGAGCGCTCAGTGGCTCGATTGGCAGCGACCCCTGCCTAGCACGCGACACGGCCCTGGTTCGATTCTTGCTCGACGCGCTATTTAATTCCCTATTTATTTTTTCTCCTTCCCAAGCCCAAACGCCTTCACCAAAAATCCCGATCCTATTCAAATTGACTCGAATTATTCCGGCAATTTTAAATTTCAAAATCGGCCCGACCCAAAATTACCAAAATGCCCCTGGGCCTCCCGGGAAGGCCGGGATGAATTTTCCGGGCCGTTACAGGGGATGATGGATAAGGTGAGGAGAGGTGTTCAGATTCTGTGATGGTTAAGATTGGGGGGTTGGTCGAGGACTTAGTACCGGGGACGAAAAAGGTTGGTTTATGGTTAATAATAATGGGTTTGAGGGGTTTTTTTTTTTTTTAAGAGCAAGAGGTTTTGGTAGAGATAAGGATTGTTTGAGGTGTGAAAATCCAGGGTCGGAAGAATAACCATTGGATAAAAGTTTGGAGAATAACAGAGACTCGGTCAAAGGGTGGAAACTATTGGAAAGCAGAAGAGTAGGACCCAATGTGTCATCCATCACACCTTTTTCTTGGATAACAAGGGGGAGTGGCTCAATGTAGCAAGAACCTGTACTCGTGGATTGATGGCTCTTCAAACATCTCAGCCCTATCGTCGGACGGCAAAGCAAAGGCAGGTGGGTTTCCGATCACCGGAAAGAGGACCAAATTCCACAGCAAGGAAGGAATCAGGACCTTCCGGAGAGAGAAATCTCTGAGAAATGATAGATGGATCTTTCGGATACAGTCGAGGAGCTCTAAAGATCTCTTTTGGTCGATAAACTAACTATTGTTTCTTCAATCCTTCCTTCTTCAAGACATCCTTTGGAACAGAGGAGTCTACAATAGGGAAAGAGATATTGGTCTGATGAACAGGGATCTGGGATGTAGAAGGGTTAGCATTGATTGCACTTTTTCCTTTGGTAAGGGCTTTTAAAAAGGATAATTTATGTAGACCAATATTAATGGCTGGTTCGTTTTGTTCTGTCTTCTTGTGTGCCGGATCATCATGAATGACTGGGGAAGCAGAGGATAGAGGCTTAAACTCTACTGCTGAAAGAGCTGGTCGATTCACAGATCCAATCATTGTGGAAGATCCTTCAATGAGAGTATGGAAAGCACGCCATCCCCATCTATCACCACTTATAGGAATAACTAATTTGTTGCGTTTGCCATTATTATTAATCTTGGTGAGCTCTGCAAAATAGCTTCTCCTATTATTAACCTTTTCAACCCATATAGTATAGTATAGTCATCAGCACGAGTATTGATGAAATATTTGTGATTCAGGTTCACATTAAGGAGTGCTTTGGAACATTGACTAAGCCATTGAAGCGTAGACCACTGGATGGATAAGAAATAAGCTCTGTCTCTGGTTGTCTCTGTGATACGTAATCTGTTACCTCCATAACGGTGATCAATCTCCACCGTGTATACCTTGTTTTCAATCATTGTAATTTGAGGAAAGCTTTGGATAGGCATGATTCAAAAACCAGGAGATCGGCGGAGAAAGGGTCGGAGTGGGGGCAGAGGGTTAAAGAGGGTTGGGAGAGTTTTATTCAAATGTTATAAAGTCAAACAACATATCTCATGAGAATAGGTTGAGGTGCATATTAAGATCTTATATCAACAAAGTATTTATTTGTATGTTTTTTTTTTTTTTTTGAGATCATTAACAAAGTATTTATGTATGTAATCTATGAAATAATCTAGAAAATGACTTATAGTAAATAAGTTAAAATCCCACTGTAGCTATTATGGAGAATGTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATCCATTTAGTTTATGATTTTTTATTTTTACAAATTAAACTTGATTTCTTCTTGTTTCTATGTAGTTCTCCAAAGAAGCTCTTGAATTCATAGATAACAAAAACAATTTCACAAGCGAGGCTTTAATTTTTTTTCATATATGCTTTTAGCTAACAATGTTAATCATAAGAACTATGTAAAATGAACTTTAAAAAATCGACATTAACAAACAAACGGCATCAAAATTCAAAATTCACTCATTGCAATTCATTAAAACTCAGAACCAATTATATAGACCGTTTGATAACTATTTTATTTTTTATTTTTTGTTTTTAAAATTTAAACCTACAACAACTACTTTATCATTCATTTTTTCTTATTTGGATATCTATATCTTACTTATATTTTAAACAACAAAAATTTGGAAACAAAAAAAAAGTATGTTCTAAAAACTTGTTTTTGTTTTTGAAATTTGATTAATATTCACCTACTTTCTTAAGAAAATGAGGATACATTATAGAAAAGATGGAACACATGGTAGGAATTTTGAGTAGAAATAAGCTTAAATTTCATAAACAAAAAACAAAAAACCAAAGGGTTATCAAAGGGGACCATAATTTCTCATTGATGATCAACTGTGTTTGTATTGTTACGGATTTCAGGTGGCATCTCTGCAGGCGGAGTTTGCGGCGGTTCAAACTCAACTGATAAGCAGCAGGTTGGCATTTGCAACTGCAATTCAAAACTCGCAGCCACCCCAAGTTGGAGTGCTGCAGCCAGCTTACTCCAACAACTCATCTATCTCTGTCTCTGCCTCGACCTCCGCTCATAACGCTATCAATTTGAGTAGTTTTGCTTCCAATTACGACCTTCCGACCGAGGCTGCCCCATCTCCCCATCACTTGGAGCCTCTCCACCTCCCCCACCAATCCATCGAAGAGGAGGACGACGAGGAAAATAGTCGGTTGCCTTCCATCTTTGTTGACGAGCTACTCCGTCGGAGATGA

mRNA sequence

ATGGCGGATCAAGAAGATCAAATCCCTCTCCGGAAACCCATCGGAAAGCGCGCCGCCGCCGCAGCCAACCGGCCGGAATCCGACTCCGGCTTTTCTCCTCCGACACCCTGCGGCGCGTGCAAGTTTCTGAGAAGGAAATGCATCAACGGCTGCATCTTCGCGCCGCACTTCGCCTCCGATCAAGGCGCTGCTCGCTTCGCCGCCGTGCATAAGGTTTTCGGAGCGAGTAATGTCTCTAAGCTTCTGCTGCATATTCCGGTCAGCCGCCGTAACGACGCCGTCGTCACCATTACCTATGAGGCTCAGGCGAGACTCTCCGATCCTGTCTATGGCTGCGTCTCAACTGTACTTGCCCTACAACAACAGGTGGCATCTCTGCAGGCGGAGTTTGCGGCGGTTCAAACTCAACTGATAAGCAGCAGGTTGGCATTTGCAACTGCAATTCAAAACTCGCAGCCACCCCAAGTTGGAGTGCTGCAGCCAGCTTACTCCAACAACTCATCTATCTCTGTCTCTGCCTCGACCTCCGCTCATAACGCTATCAATTTGAGTAGTTTTGCTTCCAATTACGACCTTCCGACCGAGGCTGCCCCATCTCCCCATCACTTGGAGCCTCTCCACCTCCCCCACCAATCCATCGAAGAGGAGGACGACGAGGAAAATAGTCGGTTGCCTTCCATCTTTGTTGACGAGCTACTCCGTCGGAGATGA

Coding sequence (CDS)

ATGGCGGATCAAGAAGATCAAATCCCTCTCCGGAAACCCATCGGAAAGCGCGCCGCCGCCGCAGCCAACCGGCCGGAATCCGACTCCGGCTTTTCTCCTCCGACACCCTGCGGCGCGTGCAAGTTTCTGAGAAGGAAATGCATCAACGGCTGCATCTTCGCGCCGCACTTCGCCTCCGATCAAGGCGCTGCTCGCTTCGCCGCCGTGCATAAGGTTTTCGGAGCGAGTAATGTCTCTAAGCTTCTGCTGCATATTCCGGTCAGCCGCCGTAACGACGCCGTCGTCACCATTACCTATGAGGCTCAGGCGAGACTCTCCGATCCTGTCTATGGCTGCGTCTCAACTGTACTTGCCCTACAACAACAGGTGGCATCTCTGCAGGCGGAGTTTGCGGCGGTTCAAACTCAACTGATAAGCAGCAGGTTGGCATTTGCAACTGCAATTCAAAACTCGCAGCCACCCCAAGTTGGAGTGCTGCAGCCAGCTTACTCCAACAACTCATCTATCTCTGTCTCTGCCTCGACCTCCGCTCATAACGCTATCAATTTGAGTAGTTTTGCTTCCAATTACGACCTTCCGACCGAGGCTGCCCCATCTCCCCATCACTTGGAGCCTCTCCACCTCCCCCACCAATCCATCGAAGAGGAGGACGACGAGGAAAATAGTCGGTTGCCTTCCATCTTTGTTGACGAGCTACTCCGTCGGAGATGA

Protein sequence

MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGVLQPAYSNNSSISVSASTSAHNAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVDELLRRR

Homology

[Close]

BLAST of Sed0010390 vs. NCBI nr
Match: KAG6596968.1 (LOB domain-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028443.1 LOB domain-containing protein 20 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.1 bits (954), Expect = 3.6e-99
Identity = 200/244 (81.97%), Postives = 218/244 (89.34%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPT-------PCGACKFLRRKCINGCIF 60
           MAD + Q P RK +GKR ++AAN   +D+  + PT       PCGACKFLRRKC+NGCIF
Sbjct: 1   MADADHQFPRRKDLGKRTSSAAN---TDTTSATPTDIGAATAPCGACKFLRRKCVNGCIF 60

Query: 61  APHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCV 120
           APHFASDQG ARFAAVHKVFGASNVSKLLLHIP+SRRNDAVVTI+YEAQARLSDPVYGCV
Sbjct: 61  APHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCV 120

Query: 121 STVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGV-LQPAYSNNSSISVS 180
           STVLALQQQVASLQAE AAVQ+QLISSRLAFA+AIQNSQPPQVGV LQPAYSNNSSISVS
Sbjct: 121 STVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVS 180

Query: 181 ASTSAHNAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVDEL 237
           ASTSAHNAINLSSFASNYDLPTE APSPHHLEPLHLP +SIE+E+DEENS+LP+IF D+L
Sbjct: 181 ASTSAHNAINLSSFASNYDLPTETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDL 240

[Close]

BLAST of Sed0010390 vs. NCBI nr
Match: XP_022945292.1 (LOB domain-containing protein 20 [Cucurbita moschata])

HSP 1 Score: 371.7 bits (953), Expect = 4.7e-99
Identity = 200/244 (81.97%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPT-------PCGACKFLRRKCINGCIF 60
           MAD + Q P RK +GKR ++AAN   +D+  S PT       PCGACKFLRRKC+NGCIF
Sbjct: 1   MADADHQFPRRKDLGKRTSSAAN---TDTTSSTPTDIGAATAPCGACKFLRRKCVNGCIF 60

Query: 61  APHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCV 120
           APHFASDQG ARFAAVHKVFGASNVSKLLLHIP+SRRNDAVVTI+YEAQARLSDPVYGCV
Sbjct: 61  APHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCV 120

Query: 121 STVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGV-LQPAYSNNSSISVS 180
           STVL LQQQVASLQAE AAVQ+QLISSRLAFA+AIQNSQPPQVGV LQPAYSNNSSISVS
Sbjct: 121 STVLTLQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVS 180

Query: 181 ASTSAHNAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVDEL 237
           ASTSAHNAINLSSFASNYDLPTE APSPHHLEPLHLP +SIE+E+DEENS+LP+IF D+L
Sbjct: 181 ASTSAHNAINLSSFASNYDLPTETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDL 240

[Close]

BLAST of Sed0010390 vs. NCBI nr
Match: XP_023539451.1 (LOB domain-containing protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.2 bits (949), Expect = 1.4e-98
Identity = 199/244 (81.56%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPT-------PCGACKFLRRKCINGCIF 60
           MAD + Q P RK +GKR ++AAN   +D+  + PT       PCGACKFLRRKC+NGCIF
Sbjct: 1   MADADHQFPRRKDLGKRTSSAAN---TDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIF 60

Query: 61  APHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCV 120
           APHFASDQG ARFAAVHKVFGASNVSKLLLHIP+SRRNDAVVTI+YEAQARLSDPVYGCV
Sbjct: 61  APHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCV 120

Query: 121 STVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGV-LQPAYSNNSSISVS 180
           STVLALQQQVASLQAE AAVQ+QLISSRLAFA+AIQNSQPPQVGV LQPAYSNNSSISVS
Sbjct: 121 STVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVS 180

Query: 181 ASTSAHNAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVDEL 237
           ASTSAHNAINLSSFASNYDLP E APSPHHLEPLHLP +SIE+E+DEENS+LP+IF D+L
Sbjct: 181 ASTSAHNAINLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDL 240

[Close]

BLAST of Sed0010390 vs. NCBI nr
Match: XP_022973353.1 (LOB domain-containing protein 20-like [Cucurbita maxima] >XP_022975179.1 LOB domain-containing protein 20-like [Cucurbita maxima])

HSP 1 Score: 369.8 bits (948), Expect = 1.8e-98
Identity = 198/244 (81.15%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPT-------PCGACKFLRRKCINGCIF 60
           MAD + Q P RK +GKR ++  N   +D+  + PT       PCGACKFLRRKC+NGCIF
Sbjct: 1   MADADHQFPRRKDLGKRTSSTTN---TDTSSATPTDIGATTAPCGACKFLRRKCVNGCIF 60

Query: 61  APHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCV 120
           APHFASDQG ARFAAVHKVFGASNVSKLLLHIP+SRRNDAVVTI+YEAQARLSDPVYGCV
Sbjct: 61  APHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCV 120

Query: 121 STVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGV-LQPAYSNNSSISVS 180
           STVLALQQQVASLQAE AAVQ+QLISSRLAFA+AIQNSQPPQVGV LQPAYSNNSSISVS
Sbjct: 121 STVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVS 180

Query: 181 ASTSAHNAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVDEL 237
           ASTSAHNAINLSSFASNYDLPTE APSPHHLEPLHLP +SIE+E+DEENS+LP+IF D+L
Sbjct: 181 ASTSAHNAINLSSFASNYDLPTETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDL 240

[Close]

BLAST of Sed0010390 vs. NCBI nr
Match: XP_023521381.1 (LOB domain-containing protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.4 bits (947), Expect = 2.3e-98
Identity = 198/244 (81.15%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPT-------PCGACKFLRRKCINGCIF 60
           MAD + Q P RK +GKR ++AAN   +D+  + PT       PCGACKFLRRKC+NGCIF
Sbjct: 1   MADADHQFPRRKDLGKRTSSAAN---TDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIF 60

Query: 61  APHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCV 120
           APHFASDQG ARFAAVHKVFGASNVSKLLLHIP+SRRNDAVVTI+YEAQARLSDPVYGCV
Sbjct: 61  APHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCV 120

Query: 121 STVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGV-LQPAYSNNSSISVS 180
           STVLALQQQVASLQAE AAVQ+QLISSRLAFA+AIQNSQPPQVGV +QPAYSNNSSISVS
Sbjct: 121 STVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQMQPAYSNNSSISVS 180

Query: 181 ASTSAHNAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVDEL 237
           ASTSAHNAINLSSFASNYDLP E APSPHHLEPLHLP +SIE+E+DEENS+LP+IF D+L
Sbjct: 181 ASTSAHNAINLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDL 240

[Close]

BLAST of Sed0010390 vs. ExPASy Swiss-Prot
Match: Q9SRV3 (LOB domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=LBD20 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.8e-54
Identity = 126/223 (56.50%), Postives = 160/223 (71.75%), Query Frame = 0


Query: 13  PIGKRAAAAANRPESDSGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKV 72
           P    ++   +   + +G    +PCGACKFLRRKC++GCIFAPHF SDQGAARFAAVHKV
Sbjct: 28  PTSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKV 87

Query: 73  FGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAA 132
           FGASNVSKLL HIPV+RR+DAVVTI+YEAQARLSDPVYGCVST+LALQQQVASLQAE + 
Sbjct: 88  FGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAELSV 147

Query: 133 VQTQLISSRLAFATAI------QNSQPPQVGVLQPAYSNNSSISVSASTSAHNAINLSSF 192
           VQ+QLI+SR+A A  +      Q  Q   V + QP YSNNSS S + + +A N+  +++ 
Sbjct: 148 VQSQLINSRVAMANVMQQQTHHQQQQQQLVVMQQPEYSNNSSASTTLAGAAMNSFTMTAD 207

Query: 193 AS--NYDLPTEAAPS--PHHLEPLHLPHQ----SIEEEDDEEN 222
           A+  +YD+    AP+   H L+P+  PHQ      + ED+EE+
Sbjct: 208 AAAVSYDV---MAPTNLEHSLQPMP-PHQQRRGDYQHEDEEES 246

[Close]

BLAST of Sed0010390 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-38
Identity = 81/114 (71.05%), Postives = 93/114 (81.58%), Query Frame = 0


Query: 29  SGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVSKLLLHIPVS 88
           SG     PCGACKFLRRKC+ GCIFAP+F S+QG+A FAAVHKVFGASNVSKLLLHIPV 
Sbjct: 30  SGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVH 89

Query: 89  RRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLISSRL 143
           RR+DAVVTI YEAQAR+ DP+YGCV+ + ALQQQV +LQAE + +Q  L S  L
Sbjct: 90  RRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLEL 143

[Close]

BLAST of Sed0010390 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-36
Identity = 95/187 (50.80%), Postives = 120/187 (64.17%), Query Frame = 0


Query: 20  AAANRPESDSGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVS 79
           +++  P S SG     PCGACKFLRRKC+ GCIFAP+F S+QGAA FAAVHKVFGASNVS
Sbjct: 2   SSSGNPSSSSG-GGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 61

Query: 80  KLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLIS 139
           KLL H+P  +R DAVV+I +EAQARL DP+YGCVS +++LQQQV SLQ E + +Q  L +
Sbjct: 62  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLAT 121

Query: 140 SRLAFATAIQNSQPPQV-----GVLQPAYSNNSSISVSASTSAHNAINLSSFASNYDLPT 199
             L         QPPQV     G LQ A S     ++S S    ++I     +S + +  
Sbjct: 122 LEL------PQPQPPQVPVSSSGSLQ-ALSITDLPTISPSVYDLSSIFEPVMSSTWAMQQ 180

Query: 200 EAAPSPH 202
           +  PS H
Sbjct: 182 QPRPSDH 180

[Close]

BLAST of Sed0010390 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.5e-36
Identity = 75/117 (64.10%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 35  TPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAV 94
           +PCGACKFLRRKC + CIFAP+F+S+QGAARFAA+HKVFGASNVSKLLL++P+  R +AV
Sbjct: 14  SPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCEAV 73

Query: 95  VTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNS 152
           VTI YEAQARL DPVYGCVS + ALQQQVA LQ++   ++ Q+   + + A  +++S
Sbjct: 74  VTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

[Close]

BLAST of Sed0010390 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-35
Identity = 74/127 (58.27%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 27  SDSGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVSKLLLHIP 86
           + S  S  +PCGACKFLRRKC  GC+FAP+F  +QGA+ FAA+HKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 87  VSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLISSRLAFAT 146
           +S R +A +TI+YEAQARL DP+YGCVS + ALQQQV +LQAE   ++ Q   S + FA 
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQS-MIFAD 121

Query: 147 AIQNSQP 154
           +  +  P
Sbjct: 122 SPTSENP 127

[Close]

BLAST of Sed0010390 vs. ExPASy TrEMBL
Match: A0A6J1G0I5 (LOB domain-containing protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111449577 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.3e-99
Identity = 200/244 (81.97%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPT-------PCGACKFLRRKCINGCIF 60
           MAD + Q P RK +GKR ++AAN   +D+  S PT       PCGACKFLRRKC+NGCIF
Sbjct: 1   MADADHQFPRRKDLGKRTSSAAN---TDTTSSTPTDIGAATAPCGACKFLRRKCVNGCIF 60

Query: 61  APHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCV 120
           APHFASDQG ARFAAVHKVFGASNVSKLLLHIP+SRRNDAVVTI+YEAQARLSDPVYGCV
Sbjct: 61  APHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCV 120

Query: 121 STVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGV-LQPAYSNNSSISVS 180
           STVL LQQQVASLQAE AAVQ+QLISSRLAFA+AIQNSQPPQVGV LQPAYSNNSSISVS
Sbjct: 121 STVLTLQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVS 180

Query: 181 ASTSAHNAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVDEL 237
           ASTSAHNAINLSSFASNYDLPTE APSPHHLEPLHLP +SIE+E+DEENS+LP+IF D+L
Sbjct: 181 ASTSAHNAINLSSFASNYDLPTETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDL 240

[Close]

BLAST of Sed0010390 vs. ExPASy TrEMBL
Match: A0A6J1IJP1 (LOB domain-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111474219 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 8.6e-99
Identity = 198/244 (81.15%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPT-------PCGACKFLRRKCINGCIF 60
           MAD + Q P RK +GKR ++  N   +D+  + PT       PCGACKFLRRKC+NGCIF
Sbjct: 1   MADADHQFPRRKDLGKRTSSTTN---TDTSSATPTDIGATTAPCGACKFLRRKCVNGCIF 60

Query: 61  APHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCV 120
           APHFASDQG ARFAAVHKVFGASNVSKLLLHIP+SRRNDAVVTI+YEAQARLSDPVYGCV
Sbjct: 61  APHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCV 120

Query: 121 STVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGV-LQPAYSNNSSISVS 180
           STVLALQQQVASLQAE AAVQ+QLISSRLAFA+AIQNSQPPQVGV LQPAYSNNSSISVS
Sbjct: 121 STVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVS 180

Query: 181 ASTSAHNAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVDEL 237
           ASTSAHNAINLSSFASNYDLPTE APSPHHLEPLHLP +SIE+E+DEENS+LP+IF D+L
Sbjct: 181 ASTSAHNAINLSSFASNYDLPTETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDL 240

[Close]

BLAST of Sed0010390 vs. ExPASy TrEMBL
Match: A0A5D3DPT9 (LOB domain-containing protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007110 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93
Identity = 190/230 (82.61%), Postives = 203/230 (88.26%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPTPCGACKFLRRKCINGCIFAPHFASD 60
           MAD  DQ+P RKP+G +    ANR + DS  +   PCGACKFLRRKCINGCIFAPHFASD
Sbjct: 1   MAD-ADQLPRRKPLGNK---RANR-DPDSA-TVTAPCGACKFLRRKCINGCIFAPHFASD 60

Query: 61  QGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQ 120
           QGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTI+YEAQARLSDPVYGCVSTVLALQ
Sbjct: 61  QGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQ 120

Query: 121 QQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGVLQPAYSNNSSISVSASTSAHNA 180
           QQVASLQAE AAVQ Q+ISSRLAFA A+QNS P QVGVLQPAYSNNSSISVSASTS HNA
Sbjct: 121 QQVASLQAELAAVQAQVISSRLAFAAAVQNSHPSQVGVLQPAYSNNSSISVSASTSTHNA 180

Query: 181 INLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVD 231
           INLSSFASNYDLPTE APS HHLEP H PH+ I+EE+DEENS+LP+IF D
Sbjct: 181 INLSSFASNYDLPTETAPSSHHLEPPHFPHRPIDEEEDEENSQLPAIFAD 224

[Close]

BLAST of Sed0010390 vs. ExPASy TrEMBL
Match: A0A1S3B8H2 (LOB domain-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103486927 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93
Identity = 190/230 (82.61%), Postives = 203/230 (88.26%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPTPCGACKFLRRKCINGCIFAPHFASD 60
           MAD  DQ+P RKP+G +    ANR + DS  +   PCGACKFLRRKCINGCIFAPHFASD
Sbjct: 1   MAD-ADQLPRRKPLGNK---RANR-DPDSA-TVTAPCGACKFLRRKCINGCIFAPHFASD 60

Query: 61  QGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQ 120
           QGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTI+YEAQARLSDPVYGCVSTVLALQ
Sbjct: 61  QGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQ 120

Query: 121 QQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGVLQPAYSNNSSISVSASTSAHNA 180
           QQVASLQAE AAVQ Q+ISSRLAFA A+QNS P QVGVLQPAYSNNSSISVSASTS HNA
Sbjct: 121 QQVASLQAELAAVQAQVISSRLAFAAAVQNSHPSQVGVLQPAYSNNSSISVSASTSTHNA 180

Query: 181 INLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFVD 231
           INLSSFASNYDLPTE APS HHLEP H PH+ I+EE+DEENS+LP+IF D
Sbjct: 181 INLSSFASNYDLPTETAPSSHHLEPPHFPHRPIDEEEDEENSQLPAIFAD 224

[Close]

BLAST of Sed0010390 vs. ExPASy TrEMBL
Match: A0A6J1D2B2 (LOB domain-containing protein 20 OS=Momordica charantia OX=3673 GN=LOC111016651 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.2e-92
Identity = 193/240 (80.42%), Postives = 207/240 (86.25%), Query Frame = 0


Query: 1   MADQEDQIPLRKPIGKRAAAAANRPESDSGFSPPTPCGACKFLRRKCINGCIFAPHFASD 60
           MAD  + + L  P  KR      +P+S        PCGACKFLRRKC+NGCIFAPHF SD
Sbjct: 1   MADAGELVVL-APRRKRGGNRQEQPDS------VAPCGACKFLRRKCVNGCIFAPHFGSD 60

Query: 61  QGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQ 120
           QGAARFAAVHKVFGASNVSKLLLHIPV+RR+DAVVTI+YEAQARLSDPVYGCVSTVLALQ
Sbjct: 61  QGAARFAAVHKVFGASNVSKLLLHIPVTRRHDAVVTISYEAQARLSDPVYGCVSTVLALQ 120

Query: 121 QQVASLQAEFAAVQTQLISSRLAFATAIQNSQPPQVGVLQPAYSNNSSISV--SASTSAH 180
           QQVASLQAE AAVQTQLI+SRLAFATAIQNSQPPQVGVLQPAYSNNSS+SV  SASTSAH
Sbjct: 121 QQVASLQAELAAVQTQLINSRLAFATAIQNSQPPQVGVLQPAYSNNSSVSVSASASTSAH 180

Query: 181 NAINLSSFASNYDLPTEAAPSPHHLEPLHLPHQSIEEEDDEENSRLPSIFV--DELLRRR 237
           NAINLSSF SNYDLPTE APS H LEPLHLPH+SIEEE+DEENS+LP+IF   DELLRRR
Sbjct: 181 NAINLSSFTSNYDLPTETAPSSHQLEPLHLPHRSIEEEEDEENSQLPTIFTVPDELLRRR 233

[Close]

BLAST of Sed0010390 vs. TAIR 10
Match: AT3G03760.1 (LOB domain-containing protein 20 )

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-55
Identity = 126/223 (56.50%), Postives = 160/223 (71.75%), Query Frame = 0


Query: 13  PIGKRAAAAANRPESDSGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKV 72
           P    ++   +   + +G    +PCGACKFLRRKC++GCIFAPHF SDQGAARFAAVHKV
Sbjct: 28  PTSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKV 87

Query: 73  FGASNVSKLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAA 132
           FGASNVSKLL HIPV+RR+DAVVTI+YEAQARLSDPVYGCVST+LALQQQVASLQAE + 
Sbjct: 88  FGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAELSV 147

Query: 133 VQTQLISSRLAFATAI------QNSQPPQVGVLQPAYSNNSSISVSASTSAHNAINLSSF 192
           VQ+QLI+SR+A A  +      Q  Q   V + QP YSNNSS S + + +A N+  +++ 
Sbjct: 148 VQSQLINSRVAMANVMQQQTHHQQQQQQLVVMQQPEYSNNSSASTTLAGAAMNSFTMTAD 207

Query: 193 AS--NYDLPTEAAPS--PHHLEPLHLPHQ----SIEEEDDEEN 222
           A+  +YD+    AP+   H L+P+  PHQ      + ED+EE+
Sbjct: 208 AAAVSYDV---MAPTNLEHSLQPMP-PHQQRRGDYQHEDEEES 246

[Close]

BLAST of Sed0010390 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 161.4 bits (407), Expect = 9.0e-40
Identity = 81/114 (71.05%), Postives = 93/114 (81.58%), Query Frame = 0


Query: 29  SGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVSKLLLHIPVS 88
           SG     PCGACKFLRRKC+ GCIFAP+F S+QG+A FAAVHKVFGASNVSKLLLHIPV 
Sbjct: 30  SGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVH 89

Query: 89  RRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLISSRL 143
           RR+DAVVTI YEAQAR+ DP+YGCV+ + ALQQQV +LQAE + +Q  L S  L
Sbjct: 90  RRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLEL 143

[Close]

BLAST of Sed0010390 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 95/187 (50.80%), Postives = 120/187 (64.17%), Query Frame = 0


Query: 20  AAANRPESDSGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVS 79
           +++  P S SG     PCGACKFLRRKC+ GCIFAP+F S+QGAA FAAVHKVFGASNVS
Sbjct: 2   SSSGNPSSSSG-GGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 61

Query: 80  KLLLHIPVSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLIS 139
           KLL H+P  +R DAVV+I +EAQARL DP+YGCVS +++LQQQV SLQ E + +Q  L +
Sbjct: 62  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLAT 121

Query: 140 SRLAFATAIQNSQPPQV-----GVLQPAYSNNSSISVSASTSAHNAINLSSFASNYDLPT 199
             L         QPPQV     G LQ A S     ++S S    ++I     +S + +  
Sbjct: 122 LEL------PQPQPPQVPVSSSGSLQ-ALSITDLPTISPSVYDLSSIFEPVMSSTWAMQQ 180

Query: 200 EAAPSPH 202
           +  PS H
Sbjct: 182 QPRPSDH 180

[Close]

BLAST of Sed0010390 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-37
Identity = 75/117 (64.10%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 35  TPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAV 94
           +PCGACKFLRRKC + CIFAP+F+S+QGAARFAA+HKVFGASNVSKLLL++P+  R +AV
Sbjct: 14  SPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCEAV 73

Query: 95  VTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLISSRLAFATAIQNS 152
           VTI YEAQARL DPVYGCVS + ALQQQVA LQ++   ++ Q+   + + A  +++S
Sbjct: 74  VTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

[Close]

BLAST of Sed0010390 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 74/127 (58.27%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 27  SDSGFSPPTPCGACKFLRRKCINGCIFAPHFASDQGAARFAAVHKVFGASNVSKLLLHIP 86
           + S  S  +PCGACKFLRRKC  GC+FAP+F  +QGA+ FAA+HKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 87  VSRRNDAVVTITYEAQARLSDPVYGCVSTVLALQQQVASLQAEFAAVQTQLISSRLAFAT 146
           +S R +A +TI+YEAQARL DP+YGCVS + ALQQQV +LQAE   ++ Q   S + FA 
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQS-MIFAD 121

Query: 147 AIQNSQP 154
           +  +  P
Sbjct: 122 SPTSENP 127

The following BLAST results are available for this feature:

BLAST of Sed0010390 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596968.1	3.6e-99	81.97	LOB domain-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022945292.1	4.7e-99	81.97	LOB domain-containing protein 20 [Cucurbita moschata]	[more]
XP_023539451.1	1.4e-98	81.56	LOB domain-containing protein 20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973353.1	1.8e-98	81.15	LOB domain-containing protein 20-like [Cucurbita maxima] >XP_022975179.1 LOB dom...	[more]
XP_023521381.1	2.3e-98	81.15	LOB domain-containing protein 20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0010390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRV3	2.8e-54	56.50	LOB domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=LBD20 PE=2 S...	[more]
O22131	1.3e-38	71.05	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
O81323	2.0e-36	50.80	LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S...	[more]
Q9SLB7	4.5e-36	64.10	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]
Q9M2J7	1.7e-35	58.27	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]

BLAST of Sed0010390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0I5	2.3e-99	81.97	LOB domain-containing protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111449577 P...	[more]
A0A6J1IJP1	8.6e-99	81.15	LOB domain-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC11147421...	[more]
A0A5D3DPT9	3.2e-93	82.61	LOB domain-containing protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B8H2	3.2e-93	82.61	LOB domain-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103486927 PE=3 SV...	[more]
A0A6J1D2B2	1.2e-92	80.42	LOB domain-containing protein 20 OS=Momordica charantia OX=3673 GN=LOC111016651 ...	[more]

BLAST of Sed0010390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03760.1	2.0e-55	56.50	LOB domain-containing protein 20	[more]
AT2G45420.1	9.0e-40	71.05	LOB domain-containing protein 18	[more]
AT4G00220.1	1.4e-37	50.80	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G42430.1	3.2e-37	64.10	lateral organ boundaries-domain 16	[more]
AT3G58190.1	1.2e-36	58.27	lateral organ boundaries-domain 29	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR31529:SF12	LOB DOMAIN-CONTAINING PROTEIN 20	coord: 17..211
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 17..211
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 36..134 e-value: 6.4E-37 score: 126.1
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 35..137 score: 22.894688

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010390.1	Sed0010390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:1900150	regulation of defense response to fungus
cellular_component	GO:0005634	nucleus