Sed0010353 (gene) Chayote v1

Overview


Name	Sed0010353
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Photosystem II D2 protein
Location	Contig00297: 160440 .. 161451 (-)
RNA-Seq Expression	Sed0010353
Synteny	Sed0010353

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTAGGAGGTTGGTTTACAGGTACAACTTTTGTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTTTCTACCCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGGTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACGACCTTATAATGCAATCGCATTCTCGGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTTCTCCTCTTTTTCCAAGGGTTTCATAATTGACATTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTCGAAAATACCTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATACGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCCCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

mRNA sequence

ATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTAGGAGGTTGGTTTACAGGTACAACTTTTGTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTTTCTACCCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGGTGGTGTCAATTAGGTGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACGACCTTATAATGCAATCGCATTCTCGGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTCGAAAATACCTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATACGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCCCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

Coding sequence (CDS)

ATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTAGGAGGTTGGTTTACAGGTACAACTTTTGTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTTTCTACCCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGGTGGTGTCAATTAGGTGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACGACCTTATAATGCAATCGCATTCTCGGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTCGAAAATACCTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATACGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCCCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

Protein sequence

MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Homology

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BLAST of Sed0010353 vs. NCBI nr
Match: YP_001936512.1 (photosystem II protein D2 [Fagopyrum esculentum subsp. ancestrale] >YP_009142045.1 PsbD [Fagopyrum tataricum] >YP_009271377.1 PsbD [Taraxacum officinale] >YP_009307474.1 PsbD [Taraxacum platycarpum] >YP_009307561.1 PsbD [Taraxacum mongolicum] >YP_009316540.1 photosystem II protein D2 [Taraxacum obtusifrons] >YP_009316625.1 photosystem II protein D2 [Taraxacum amplum] >YP_009327481.1 photosystem II protein D2 [Taraxacum brevicorniculatum] >YP_009327563.1 photosystem II protein D2 [Taraxacum kok-saghyz] >YP_009484524.1 photosystem II protein D2 [Fagopyrum dibotrys] >YP_009627261.1 photosystem II D2 protein [Crepidiastrum denticulatum] >YP_009632443.1 photosystem II protein D2 [Sonchus boulosii] >YP_009640843.1 photosystem II protein D2 [Sonchus canariensis] >YP_009640930.1 photosystem II protein D2 [Sonchus acaulis] >YP_009641017.1 photosystem II protein D2 [Sonchus webbii] >YP_009672492.1 photosystem II protein D2 [Cichorium intybus] >YP_009695542.1 PsbD [Hypochaeris radicata] >YP_009739910.1 PsbD [Crepidiastrum sonchifolium] >YP_009739997.1 PsbD [Ixeris polycephala] >YP_009740081.1 photosystem II protein D2 [Lapsanastrum humile] >YP_009740167.1 photosystem II protein D2 [Youngia japonica] >YP_009825255.1 photosystem II protein D2 [Sonchus oleraceus] >YP_009828158.1 photosystem II protein D2 [Sonchus asper] >YP_009971011.1 photosystem II protein D2 [Dendroseris pruinata] >YP_009971098.1 photosystem II protein D2 [Dendroseris micrantha] >YP_009971185.1 photosystem II protein D2 [Dendroseris litoralis] >YP_009971272.1 photosystem II protein D2 [Dendroseris berteroana] >YP_009971359.1 photosystem II protein D2 [Dendroseris macrantha] >YP_009971446.1 photosystem II protein D2 [Dendroseris marginata] >YP_009971533.1 photosystem II protein D2 [Dendroseris pinnata] >YP_010038709.1 photosystem II protein D2 [Sonchus arvensis] >YP_010148626.1 photosystem II protein D2 [Taraxacum hallaisanense] >YP_010148710.1 photosystem II protein D2 [Ixeris repens] >YP_398324.2 photosystem II protein D2 [Lactuca sativa] >XP_042755103.1 photosystem II D2 protein [Lactuca sativa] >B2XWK0.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Fagopyrum esculentum subsp. ancestrale] >Q56P05.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Lactuca sativa] >AJE74472.1 photosystem II protein D2 [Lactuca ludoviciana] >AJE74624.1 photosystem II protein D2 [Lygodesmia juncea] >AKJ77660.1 photosystem II protein D2 [Fagopyrum cymosum] >AOV93736.1 photosystem II protein D2 [Taraxacum sp. RHS-2016] >QKQ11925.1 photosystem II protein D2 [Fagopyrum esculentum] >QNZ92289.1 photosystem II protein D2 [Lactuca sativa var. angustana] >QTA72100.1 PsbD [Taraxacum coreanum] >QTA72274.1 PsbD [Taraxacum erythrospermum] >QWE49940.1 photosystem II protein D2 [Sonchus leptocephalus] >QYC93366.1 photosystem II protein D2 [Sonchus tenerrimus] >QYC93453.1 photosystem II protein D2 [Sonchus pustulatus] >QYC93627.1 photosystem II protein D2 [Sonchus novae-zelandiae] >QYC93714.1 photosystem II protein D2 [Sonchus megalocarpus] >QYC93801.1 photosystem II protein D2 [Sonchus masguindalii] >QYC93871.1 photosystem II protein D2 [Sonchus grandifolius] >QYC93975.1 photosystem II protein D2 [Sonchus fragilis] >QYC94062.1 photosystem II protein D2 [Sonchus bupleuroides] >QZP42069.1 photosystem II protein D2 [Lactuca tatarica] >QZP42156.1 photosystem II protein D2 [Sonchus brachyotus])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. NCBI nr
Match: AJE75080.1 (photosystem II protein D2 [Tragopogon dubius])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. NCBI nr
Match: YP_009447530.1 (photosystem II protein D2 [Cucurbita moschata] >YP_009505075.1 photosystem II protein D2 [Cucurbita pepo] >YP_009751901.1 photosystem II protein D2 [Cyclanthera pedata] >ALO21745.1 PsbD [Cucurbita argyrosperma] >ALO21771.1 PsbD [Cucurbita argyrosperma var. palmeri] >ALO21860.1 PsbD [Cucurbita argyrosperma subsp. sororia] >ALO22068.1 PsbD [Cucurbita ecuadorensis] >ALO22271.1 PsbD [Cucurbita lundelliana] >ALO22411.1 PsbD [Cucurbita okeechobeensis] >ALO22525.1 PsbD [Cucurbita okeechobeensis subsp. martinezii] >ALO22558.1 PsbD [Cucurbita pepo subsp. fraterna] >ALO22652.1 PsbD [Cucurbita pepo subsp. ovifera] >ALO22682.1 PsbD [Cucurbita pepo var. ozarkana] >ALO22789.1 PsbD [Cucurbita pepo subsp. pepo] >ALO22833.1 PsbD [Cucurbita pepo var. texana])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. NCBI nr
Match: YP_009354541.1 (photosystem II protein D2 [Echinacea paradoxa] >YP_009354626.1 photosystem II protein D2 [Echinacea pallida] >YP_009354711.1 photosystem II protein D2 [Echinacea laevigata] >YP_009354796.1 photosystem II protein D2 [Echinacea atrorubens] >YP_009354881.1 photosystem II protein D2 [Echinacea angustifolia] >YP_009354966.1 photosystem II protein D2 [Echinacea speciosa] >YP_009355051.1 photosystem II protein D2 [Echinacea tennesseensis] >YP_009355136.1 photosystem II protein D2 [Echinacea purpurea] >YP_009355221.1 photosystem II protein D2 [Echinacea sanguinea] >YP_009383531.1 photosystem II protein D2 [Aster altaicus] >YP_009747619.1 photosystem II protein D2 [Borago officinalis] >YP_009906351.1 photosystem II protein D2 [Aster altaicus var. uchiyamae] >YP_009996051.1 photosystem II protein D2 [Aster flaccidus] >AJE74168.1 photosystem II protein D2 [Echinacea angustifolia] >ALI90600.1 PsbD, partial [Borago officinalis] >ARB02727.1 photosystem II protein D2 [Echinacea paradoxa] >ARB02812.1 photosystem II protein D2 [Echinacea pallida] >ARB02897.1 photosystem II protein D2 [Echinacea laevigata])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. NCBI nr
Match: YP_006503786.1 (photosystem II protein D2 [Datura stramonium] >YP_008563083.1 photosystem II protein D2 [Solanum lycopersicum] >YP_009123152.1 photosystem II protein D2 [Dunalia obovata] >YP_009123346.1 photosystem II protein D2 [Iochroma nitidum] >YP_009123628.1 photosystem II protein D2 [Iochroma stenanthum] >YP_009128176.1 photosystem II protein D2 [Saracha punctata] >YP_009128835.1 photosystem II protein D2 [Iochroma loxense] >YP_009131708.1 photosystem II protein D [Solanum cheesmaniae] >YP_009131791.1 photosystem II protein D [Solanum chilense] >YP_009131874.1 photosystem II protein D [Solanum galapagense] >YP_009131957.1 photosystem II protein D [Solanum habrochaites] >YP_009132040.1 photosystem II protein D [Solanum neorickii] >YP_009132123.1 photosystem II protein D [Solanum peruvianum] >YP_009132206.1 photosystem II protein D [Solanum pimpinellifolium] >YP_009132747.1 photosystem II protein D2 [Dunalia brachyacantha] >YP_009139463.1 photosystem II protein D2 [Dunalia solanacea] >YP_009171777.1 PsbD [Solanum commersonii] >YP_009171863.1 PsbD [Solanum nigrum] >YP_009240594.1 photosystem II protein D2 [Trompettia cardenasiana] >YP_009243211.1 photosystem II protein D2 [Iochroma australe] >YP_009250860.1 photosystem II protein D2 [Iochroma umbellatum] >YP_009252587.1 photosystem II protein D2 [Iochroma lehmannii] >YP_009252843.1 photosystem II protein D2 [Eriolarynx fasciculata] >YP_009253068.1 photosystem II protein D2 [Iochroma ellipticum] >YP_009253383.1 photosystem II protein D2 [Acnistus arborescens] >YP_009380293.1 PsbD [Solanum berthaultii] >YP_009420656.1 photosystem II protein D2 [Solanum dulcamara] >YP_009421352.1 photosystem II protein D2 [Solanum pennellii] >YP_009582251.1 PsbD [Solanum acaule] >YP_009582338.1 PsbD [Solanum demissum] >YP_009584877.1 PsbD [Solanum abancayense] >YP_009584962.1 PsbD [Solanum achacachense] >YP_009585047.1 PsbD [Solanum acroglossum] >YP_009585217.1 PsbD [Solanum albornozii] >YP_009585302.1 PsbD [Solanum ambosinum] >YP_009585387.1 PsbD [Solanum andreanum] >YP_009585472.1 PsbD [Solanum avilesii] >YP_009585557.1 PsbD [Solanum microdontum] >YP_009585642.1 PsbD [Solanum x blanco-galdosii] >YP_009585727.1 PsbD [Solanum stenophyllidium] >YP_009585812.1 PsbD [Solanum brevicaule] >YP_009585897.1 PsbD [Solanum bukasovii] >YP_009585982.1 PsbD [Solanum cajamarquense] >YP_009586067.1 PsbD [Solanum canasense] >YP_009586152.1 PsbD [Solanum cardiophyllum] >YP_009586237.1 PsbD [Solanum chacoense] >YP_009586322.1 PsbD [Solanum chomatophilum] >YP_009586407.1 PsbD [Solanum etuberosum] >YP_009586492.1 PsbD [Solanum stenotomum subsp. goniocalyx] >YP_009586577.1 PsbD [Solanum gourlayi] >YP_009586662.1 PsbD [Solanum stenotomum] >YP_009586747.1 PsbD [Solanum hondelmannii] >YP_009586832.1 PsbD [Solanum venturii] >YP_009586917.1 PsbD [Solanum marinasense] >YP_009587002.1 PsbD [Solanum hypacrarthrum] >YP_009587087.1 PsbD [Solanum incamayoense] >YP_009587172.1 PsbD [Solanum jamesii] >YP_009587257.1 PsbD [Solanum kurtzianum] >YP_009587342.1 PsbD [Solanum laxissimum] >YP_009587427.1 PsbD [Solanum leptophyes] >YP_009587512.1 PsbD [Solanum limbaniense] >YP_009587597.1 PsbD [Solanum medians] >YP_009587682.1 PsbD [Solanum megistacrolobum] >YP_009587767.1 PsbD [Solanum multiinterruptum] >YP_009587852.1 PsbD [Solanum bukasovii f. multidissectum] >YP_009587937.1 PsbD [Solanum palustre] >YP_009588022.1 PsbD [Solanum pampasense] >YP_009588107.1 PsbD [Solanum paucissectum] >YP_009588192.1 PsbD [Solanum phureja] >YP_009588277.1 PsbD [Solanum pinnatisectum] >YP_009588362.1 PsbD [Solanum polyadenium] >YP_009588447.1 PsbD [Solanum sogarandinum] >YP_009588532.1 PsbD [Solanum sparsipilum] >YP_009588617.1 PsbD [Solanum spegazzinii] >YP_009588702.1 PsbD [Solanum tarijense] >YP_009588787.1 PsbD [Solanum verrucosum] >YP_009588872.1 PsbD [Solanum vernei] >YP_009588957.1 PsbD [Solanum violaceimarmoratum] >YP_009630517.1 photosystem II protein D2 [Lycium chinense] >YP_009685406.1 photosystem II protein D2 [Cirsium rhinoceros] >YP_009756275.1 photosystem II protein D2 [Withania coagulans] >YP_009915714.1 PsbD [Solanum stenotomum subsp. goniocalyx] >YP_009915799.1 PsbD [Solanum ahanhuiri] >YP_009915884.1 PsbD [Solanum stenotomum subsp. stenotomum] >YP_009915969.1 PsbD [Solanum tuberosum subsp. andigenum] >YP_009916054.1 PsbD [Solanum x juzepczukii] >YP_009916139.1 PsbD [Solanum chaucha] >YP_009916224.1 PsbD [Solanum x curtilobum] >YP_010027012.1 photosystem II protein D2 [Cirsium japonicum] >YP_538843.1 photosystem II protein D2 [Solanum bulbocastanum] >YP_635634.1 photosystem II protein D2 [Solanum tuberosum] >AP_004923.1 photosystem II protein D2 [Solanum lycopersicum] >Q2MIA5.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Solanum lycopersicum] >Q2MIJ2.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Solanum bulbocastanum] >Q2VEI1.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Solanum tuberosum] >AJE73484.1 photosystem II protein D2 [Cirsium undulatum] >AJE74092.1 photosystem II protein D2 [Cirsium altissimum] >AJE74776.1 photosystem II protein D2 [Cirsium canescens] >AJR30374.1 photosystem II protein D2 [Vassobia breviflora] >AJR32895.1 photosystem II protein D2 [Dunalia spinosa] >AJS14333.1 photosystem II protein D2 [Iochroma calycinum] >AJW75045.1 photosystem II protein D2 [Vassobia dichotoma] >AKZ22944.1 photosystem II protein D2 [Solanum triflorum] >ALN11568.1 photosystem II protein D2 [Iochroma edule] >AMX21592.1 photosystem II protein D2 [Iochroma grandiflorum] >ANC95051.1 photosystem II protein D2 [Dunalia spathulata] >ANC95230.1 photosystem II protein D2 [Iochroma gesnerioides] >ANC96373.1 photosystem II protein D2 [Iochroma albianthum] >ANE20276.1 photosystem II protein D2 [Iochroma confertiflorum] >ATL16734.1 photosystem II protein D2 [Cirsium japonicum var. maackii] >ATL16799.1 photosystem II protein D2 [Cirsium japonicum var. spinosissimum] >ATL23052.1 PsbD [Solanum hougasii] >ATL23139.1 PsbD [Solanum stoloniferum] >QBE87808.1 photosystem II protein D2 [Corbichonia decumbens] >QFR99302.1 photosystem II D2 protein [Withania somnifera] >QGT34727.1 PsbD [Solanum hjertingii] >QGX04307.1 photosystem II protein D2 [Nicandra physalodes] >QWE50216.1 photosystem II subunit D2 [Biophytum sensitivum] >QXL61690.1 photosystem II protein D2 [Litothamnus nitidus] >DAC81840.1 TPA_asm: photosystem II protein D2 [Withania adpressa])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy Swiss-Prot
Match: P69685 (Photosystem II D2 protein OS=Antirrhinum majus OX=4151 GN=psbD PE=1 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.3e-162
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy Swiss-Prot
Match: Q8S8X8 (Photosystem II D2 protein OS=Atropa belladonna OX=33113 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.3e-162
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy Swiss-Prot
Match: B5LMM1 (Photosystem II D2 protein OS=Cicer arietinum OX=3827 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.3e-162
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy Swiss-Prot
Match: Q4VZN8 (Photosystem II D2 protein OS=Cucumis sativus OX=3659 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.3e-162
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy Swiss-Prot
Match: Q0G9W7 (Photosystem II D2 protein OS=Daucus carota OX=4039 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.3e-162
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy TrEMBL
Match: A0A218KG45 (Photosystem II D2 protein OS=Cucumis sativus var. hardwickii OX=319220 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.9e-160
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy TrEMBL
Match: A0A7H1KFL8 (Photosystem II D2 protein OS=Meconopsis henrici OX=248836 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.9e-160
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy TrEMBL
Match: A0A1U9YE55 (Photosystem II D2 protein OS=Rehmannia glutinosa OX=99300 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.9e-160
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy TrEMBL
Match: A0A172W3U6 (Photosystem II D2 protein OS=Helianthus annuus OX=4232 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.9e-160
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. ExPASy TrEMBL
Match: D3WBR2 (Photosystem II D2 protein OS=Lonicera japonica OX=105884 GN=psbD PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.9e-160
Identity = 293/337 (86.94%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. TAIR 10
Match: ATCG00270.1 (photosystem II reaction center protein D )

HSP 1 Score: 572.4 bits (1474), Expect = 2.1e-163
Identity = 292/337 (86.65%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 60
           MDDWLRRDRFVFVG WSGLLLFPCAYFA+GGWFTGTTFVTSWYTHGLASSYLEGCNFLTA
Sbjct: 19  MDDWLRRDRFVFVG-WSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTA 78

Query: 61  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG---------------GFMLRQFELARSV 120
           AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG               GFMLRQFELARSV
Sbjct: 79  AVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALIGFMLRQFELARSV 138

Query: 121 QLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------- 180
           QL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                      
Sbjct: 139 QL-RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNP 198

Query: 181 -----VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 240
                VAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ
Sbjct: 199 FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQ 258

Query: 241 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 296
           IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Sbjct: 259 IFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY 318

[Close]

BLAST of Sed0010353 vs. TAIR 10
Match: ATCG00020.1 (photosystem II reaction center protein A )

HSP 1 Score: 89.4 bits (220), Expect = 5.4e-18
Identity = 76/280 (27.14%), Postives = 127/280 (45.36%), Query Frame = 0


Query: 11  VFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPA 70
           +++G W G+L+ P    A   +             G+    + S L G N ++ A+   +
Sbjct: 28  LYIG-WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTS 87

Query: 71  NSLAHSLLLLWGPEAQGDFTRWCQLGG---------------FMLRQFELARSVQLRRPY 130
            ++      +W          W   GG               +M R++EL+  + + RP+
Sbjct: 88  AAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM-RPW 147

Query: 131 NAIAFSGPIAVFVSVFLIYPLGQ-----------SGWF----------------FAPSFV 190
            A+A+S P+A   +VFLIYP+GQ           SG F                F    V
Sbjct: 148 IAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGV 207

Query: 191 AGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--G 242
           AGV G +L  A+HG+ V ++L  E  +  +    +   Q EETY++V A+ ++ ++    
Sbjct: 208 AGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQY 267

The following BLAST results are available for this feature:

BLAST of Sed0010353 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_001936512.1	1.0e-159	86.94	photosystem II protein D2 [Fagopyrum esculentum subsp. ancestrale] >YP_009142045...	[more]
AJE75080.1	1.0e-159	86.94	photosystem II protein D2 [Tragopogon dubius]	[more]
YP_009447530.1	1.0e-159	86.94	photosystem II protein D2 [Cucurbita moschata] >YP_009505075.1 photosystem II pr...	[more]
YP_009354541.1	1.0e-159	86.94	photosystem II protein D2 [Echinacea paradoxa] >YP_009354626.1 photosystem II pr...	[more]
YP_006503786.1	1.0e-159	86.94	photosystem II protein D2 [Datura stramonium] >YP_008563083.1 photosystem II pro...	[more]

BLAST of Sed0010353 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P69685	1.3e-162	86.94	Photosystem II D2 protein OS=Antirrhinum majus OX=4151 GN=psbD PE=1 SV=1	[more]
Q8S8X8	1.3e-162	86.94	Photosystem II D2 protein OS=Atropa belladonna OX=33113 GN=psbD PE=3 SV=1	[more]
B5LMM1	1.3e-162	86.94	Photosystem II D2 protein OS=Cicer arietinum OX=3827 GN=psbD PE=3 SV=1	[more]
Q4VZN8	1.3e-162	86.94	Photosystem II D2 protein OS=Cucumis sativus OX=3659 GN=psbD PE=3 SV=1	[more]
Q0G9W7	1.3e-162	86.94	Photosystem II D2 protein OS=Daucus carota OX=4039 GN=psbD PE=3 SV=1	[more]

BLAST of Sed0010353 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG45	4.9e-160	86.94	Photosystem II D2 protein OS=Cucumis sativus var. hardwickii OX=319220 GN=psbD P...	[more]
A0A7H1KFL8	4.9e-160	86.94	Photosystem II D2 protein OS=Meconopsis henrici OX=248836 GN=psbD PE=3 SV=1	[more]
A0A1U9YE55	4.9e-160	86.94	Photosystem II D2 protein OS=Rehmannia glutinosa OX=99300 GN=psbD PE=3 SV=1	[more]
A0A172W3U6	4.9e-160	86.94	Photosystem II D2 protein OS=Helianthus annuus OX=4232 GN=psbD PE=3 SV=1	[more]
D3WBR2	4.9e-160	86.94	Photosystem II D2 protein OS=Lonicera japonica OX=105884 GN=psbD PE=3 SV=1	[more]

BLAST of Sed0010353 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00270.1	2.1e-163	86.65	photosystem II reaction center protein D	[more]
ATCG00020.1	5.4e-18	27.14	photosystem II reaction center protein A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 144..260 e-value: 3.4E-21 score: 75.6 coord: 12..143 e-value: 6.4E-22 score: 78.0
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	PHOTOSYSTEM II PROTEIN D1	coord: 144..295
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	PHOTOSYSTEM II PROTEIN D1	coord: 2..142
IPR036854	Photosystem II protein D1/D2 superfamily	GENE3D	1.20.85.10		coord: 144..246 e-value: 1.0E-18 score: 69.5 coord: 111..143 e-value: 1.9E-5 score: 26.3
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 2..294
None	No IPR available	PANTHER	PTHR33149:SF7	PHOTOSYSTEM II D2 PROTEIN	coord: 2..142 coord: 144..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010353.1	Sed0010353.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0010242	oxygen evolving activity