Sed0010274 (gene) Chayote v1

Overview


Name	Sed0010274
Type	gene
Organism	Sechium edule (Chayote v1)
Description	pre-mRNA-splicing factor CWC22 homolog isoform X2
Location	LG04: 37451548 .. 37453234 (-)
RNA-Seq Expression	Sed0010274
Synteny	Sed0010274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGTCCTCTTCTCCCTTGATTTCTCAATTGGGTTTCAATTTATTTCTCAATTCTTCTGTCGGACGTTCTTGTTTGTTTCCTGGGTCATGTTCAAACACTAACCTTTAATTTGGATTGCGATTTCACCAATGTATCTGGGAATTTTAAGTTTGTGTGTTTGAGTTTATAATTGTTATATTGGTATTGTGGCTGCGGTTAAAGATTTGAATGTTTTCTCCTCTTTTTGCTCCTTAAACCACACATAACTTTGTTTTGATGCCGATATGAATTTCCCTCTGCATCCCTTTTTTGTTGTCTTGTCTTGTTTTGTCTTTTTGGCTCAAACCATGAAGAGAAGTAGGAGAGAGAGTAGGAAATTGAAGTCGCCGCAATTCGCCATCTTGCTCTGATACTGATTTTGAAAGTTCAACTTCAGTGTCTTGTTTAGTCCCCAAGGTGGCATAGTGGTTGAAGACTTGAGCTTTGAAAGTTAAAGGTATGCTTCTTTCCAGGTCCCAGGTTCGAAACTCATCTATGACATTACCCTTTCGATGTCTCCCGGTGCATGGCCTAGGGACGGGCGTAGTTACCCTCGTTTCCAAAAAAAAAAAAACTTCGGTGTCTTGTTCTAGGATGATGAAAAAGTGGGAAGATCACGACCCAAGATGCGGAAGAATGCTAAGTATGGTAAAAAGAGAGCCAATAAGCGATCTCATGGTCGTCAAAGTAGAGATTACTCCCCGCGTCCTAGAAAGAGGAAGCATTCTATTAGGGACGACCGGAGCGAGGTGAAGAAGACCGATAAAAAGAAGCATAGAAGAGATGTGAGTGTTAGTGCCACAAGTGACTCTTTGAGTTGTGGAGATGGGAGTACAACCGGCAATGAAAGTGAAACCGAAAGGCGTAGAGGAAAGTCTAGAAAGAGGAAATATGGGGAAGACTGATAGAAGCATCTATTCGTGATCCTGTATATTCTTCACAGCAATTGGGTAAGATTTCCAATGGAAGCAATGGTATGAATGAACTGAAGCAGGATATTTCTTCATTAGACCAGAAGGTTGTAAATGATACTATTTGCCAGAAGGCAGATGCAGATATTTGTTCTACAACTAACAAAAGAGATTTGGTTATTGCAGCTTTGAGGCCTGAATCAAAAGTTGTCTTTTTTACAAAGCAGGCATCTGCTCCTCACGAACCTATACCAACAAAGCCATCTATATCTGACATTGGTGTCAATGAAACTGTTCAAACTCAGACCAAGATGAGGAATAATGATGATCAAATGATTAGTAATGATTTTGTTTCTTCAGCTCACAAGCCTTCTTCCTCTAATTCTATTTCAGGAGAAAATAGCTTGAATAAGTCCGGACACGAGAGTGGCCAAGCTCGCAGTTCGAACAGAAAACCATGTCCGTAGAGCAGGGTGGTGAAATGGTGCAGGTGAGGACATTTATAATGATTACGAGTTTTATTAGGATTGATCTGCAATTATTCATTTCAGGTGAACTACAAGTTCTACGTTCCAAAGAGAGCTCCTGCTTTGACTAGAAGGCAACTCAAGCGATGACGTAAAGATGCGATTTTGCAGCCTCGTGGGAAGATCGTGTTGCTTGCCAATCGAAAGAAGGTAAAGTTTTGGAAGAAAAAATTGTCTCACTTATCTACGAGAAGGATCTGTGAGCCTTGAAACATAACAATAATT

mRNA sequence

ATGGGAAAGTCCTCTTCTCCCTTGATTTCTCAATTGGGTTTCAATTTATTTCTCAATTCTTCTGTCGGACGTTCTTGTTTTCGCCGCAATTCGCCATCTTGCTCTGATACTGATTTTGAAAGTTCAACTTCAGTGTCTTGTTTAGTCCCCAAGGATGATGAAAAAGTGGGAAGATCACGACCCAAGATGCGGAAGAATGCTAAGTATGGTAAAAAGAGAGCCAATAAGCGATCTCATGGTCGTCAAAGTAGAGATTACTCCCCGCGTCCTAGAAAGAGGAAGCATTCTATTAGGGACGACCGGAGCGAGGTGAAGAAGACCGATAAAAAGAAGCATAGAAGAGATGTGAGTGTTAGTGCCACAAGTGACTCTTTGAGTTGTGGAGATGGGAGTACAACCGGCAATGAAAGTGAAACCGAAAGGCAAGCATCTATTCGTGATCCTGTATATTCTTCACAGCAATTGGGTAAGATTTCCAATGGAAGCAATGGTATGAATGAACTGAAGCAGGATATTTCTTCATTAGACCAGAAGGTTGTAAATGATACTATTTGCCAGAAGGCAGATGCAGATATTTGTTCTACAACTAACAAAAGAGATTTGGTTATTGCAGCTTTGAGGCCTGAATCAAAAGTTGTCTTTTTTACAAAGCAGGCATCTGCTCCTCACGAACCTATACCAACAAAGCCATCTATATCTGACATTGGTGTCAATGAAACTGTTCAAACTCAGACCAAGATGAGGAATAATGATGATCAAATGATTAGTAATGATTTTGTTTCTTCAGCTCACAAGCCTTCTTCCTCTAATTCTATTTCAGGAGAAAATAGCTTGAATAAGTCCGGACACGAGAGTGGCCAAGCTCGCAGTTCGAACAGAAAACCATGTCCGTAGAGCAGGGTGGTGAAATGGTGCAGGTGAACTACAAGTTCTACGTTCCAAAGAGAGCTCCTGCTTTGACTAGAAGGCAACTCAAGCGATGACGTAAAGATGCGATTTTGCAGCCTCGTGGGAAGATCGTGTTGCTTGCCAATCGAAAGAAGGTAAAGTTTTGGAAGAAAAAATTGTCTCACTTATCTACGAGAAGGATCTGTGAGCCTTGAAACATAACAATAATT

Coding sequence (CDS)

ATGGGAAAGTCCTCTTCTCCCTTGATTTCTCAATTGGGTTTCAATTTATTTCTCAATTCTTCTGTCGGACGTTCTTGTTTTCGCCGCAATTCGCCATCTTGCTCTGATACTGATTTTGAAAGTTCAACTTCAGTGTCTTGTTTAGTCCCCAAGGATGATGAAAAAGTGGGAAGATCACGACCCAAGATGCGGAAGAATGCTAAGTATGGTAAAAAGAGAGCCAATAAGCGATCTCATGGTCGTCAAAGTAGAGATTACTCCCCGCGTCCTAGAAAGAGGAAGCATTCTATTAGGGACGACCGGAGCGAGGTGAAGAAGACCGATAAAAAGAAGCATAGAAGAGATGTGAGTGTTAGTGCCACAAGTGACTCTTTGAGTTGTGGAGATGGGAGTACAACCGGCAATGAAAGTGAAACCGAAAGGCAAGCATCTATTCGTGATCCTGTATATTCTTCACAGCAATTGGGTAAGATTTCCAATGGAAGCAATGGTATGAATGAACTGAAGCAGGATATTTCTTCATTAGACCAGAAGGTTGTAAATGATACTATTTGCCAGAAGGCAGATGCAGATATTTGTTCTACAACTAACAAAAGAGATTTGGTTATTGCAGCTTTGAGGCCTGAATCAAAAGTTGTCTTTTTTACAAAGCAGGCATCTGCTCCTCACGAACCTATACCAACAAAGCCATCTATATCTGACATTGGTGTCAATGAAACTGTTCAAACTCAGACCAAGATGAGGAATAATGATGATCAAATGATTAGTAATGATTTTGTTTCTTCAGCTCACAAGCCTTCTTCCTCTAATTCTATTTCAGGAGAAAATAGCTTGAATAAGTCCGGACACGAGAGTGGCCAAGCTCGCAGTTCGAACAGAAAACCATGTCCGTAG

Protein sequence

MGKSSSPLISQLGFNLFLNSSVGRSCFRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDYSPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSATSDSLSCGDGSTTGNESETERQASIRDPVYSSQQLGKISNGSNGMNELKQDISSLDQKVVNDTICQKADADICSTTNKRDLVIAALRPESKVVFFTKQASAPHEPIPTKPSISDIGVNETVQTQTKMRNNDDQMISNDFVSSAHKPSSSNSISGENSLNKSGHESGQARSSNRKPCP

Homology

[Close]

BLAST of Sed0010274 vs. NCBI nr
Match: XP_038897880.1 (histone-lysine N-methyltransferase SETD2 isoform X1 [Benincasa hispida])

HSP 1 Score: 209.9 bits (533), Expect = 3.0e-50
Identity = 189/539 (35.06%), Postives = 212/539 (39.33%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTSVS    +DD++V RSR K RKNAK  KKR+ ++SH RQSR+ 
Sbjct: 38  YRHDSPSCSDTDFESSTSVSS-SSEDDKRVRRSRSKTRKNAKPSKKRSKRQSHDRQSRER 97

Query: 87  SPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSATSDSLS---CGDGSTTGNESETERQ- 146
           SP PRKRKHS R+D  E KK  KKK RRD SV A SDS S   CG+GSTT NESE  R+ 
Sbjct: 98  SPHPRKRKHSKRNDHCEAKKATKKKRRRDASVGAYSDSSSCSTCGNGSTTSNESEVVRRR 157

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 158 GRSGKRKGNMGKTERGRYRSKSRSPCSLSSKDSDYQNEVDDDSYVRNNFRRLRSIIVIAG 217

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 218 EENKLKTFAGNEQQEGATHQPNDVDDHPSLGDMDSKDATSKRELDYVISKEVPVVEKKKE 277

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 278 VDVPNNRNSMVVKDDGVQNEGSNKNLGGVTNDHSLDERKNGCSGKTDSVNGIDLESILRQ 337

[Close]

BLAST of Sed0010274 vs. NCBI nr
Match: XP_022139776.1 (uncharacterized protein LOC111010601 [Momordica charantia])

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-49
Identity = 193/539 (35.81%), Postives = 211/539 (39.15%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTS+S    +DDEKVGRSR    KNAK GKKRA KRS   Q RD 
Sbjct: 35  YRHDSPSCSDTDFESSTSLSSSSSEDDEKVGRSRSNKLKNAKPGKKRAKKRSRDDQIRDL 94

Query: 87  SPRPRKRKHSIRDDRSEVKKTDK-KKHRRDVSVSATS-DSLS---CGDGSTTGNESETER 146
           SP PRKRKHS R DR EVKKT+K KK RRDVSVSATS DSLS   CGDGSTT NESE +R
Sbjct: 95  SPHPRKRKHSKRHDRCEVKKTNKRKKRRRDVSVSATSRDSLSCSTCGDGSTTSNESEIDR 154

Query: 147 Q----------------------------------------------------------- 206
                                                                       
Sbjct: 155 HRGRSGKRKRNRGKTERSRYRSKSHSPCSLCSEGSDYQNEVEDGSYVENNFRRLRSVIVV 214

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 215 VGEENKLKTFDGNEQQEEVMHHPDDDHPSFGDMDSNDGMSKRELDRVTSNEASEVENKKE 274

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 275 VVIPDIRNFLVVKDGGVQNEGSNNNHGGVTNDHPLNEGNNGSGNTDRINCIDLESILRQR 334

[Close]

BLAST of Sed0010274 vs. NCBI nr
Match: XP_008463689.1 (PREDICTED: uncharacterized protein LOC103501777 isoform X1 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-47
Identity = 182/536 (33.96%), Postives = 208/536 (38.81%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTSV     +DD+KV RSR K RKN K  KKR  K+SH RQSR+ 
Sbjct: 59  YRHDSPSCSDTDFESSTSVPSSSSEDDKKVRRSRSKTRKNVKPSKKRFKKQSHDRQSREC 118

Query: 87  SPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSATSDSLS---CGDGSTTGNESETERQ- 146
           SP PRKRKHS R+DR EV K +KKK RRDVSV   SDSLS   CG+G+TT NESE  R+ 
Sbjct: 119 SPNPRKRKHSKRNDRREVNKANKKKRRRDVSV-GHSDSLSCSTCGNGTTTSNESEVVRRR 178

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 179 GRFAKRKGNMRKTGSGRYMSKSRSPCSLHSEGSDYQNEVDDDSYVEKNFRRLRSIIVVVG 238

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 239 EENKLKTFVGNEQQEVTNQLSDDHPSSGEMDSKDATGKRGLDYVVTKEALVVENEKEVDV 298

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 299 PNYRNSMVVKDGGVQNEGSNKNHGGVTNDHSSDEIKNGCSDNTDSINCIDLESMLRQRAL 358

[Close]

BLAST of Sed0010274 vs. NCBI nr
Match: XP_008463691.1 (PREDICTED: uncharacterized protein LOC103501777 isoform X2 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-47
Identity = 182/536 (33.96%), Postives = 208/536 (38.81%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTSV     +DD+KV RSR K RKN K  KKR  K+SH RQSR+ 
Sbjct: 38  YRHDSPSCSDTDFESSTSVPSSSSEDDKKVRRSRSKTRKNVKPSKKRFKKQSHDRQSREC 97

Query: 87  SPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSATSDSLS---CGDGSTTGNESETERQ- 146
           SP PRKRKHS R+DR EV K +KKK RRDVSV   SDSLS   CG+G+TT NESE  R+ 
Sbjct: 98  SPNPRKRKHSKRNDRREVNKANKKKRRRDVSV-GHSDSLSCSTCGNGTTTSNESEVVRRR 157

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 158 GRFAKRKGNMRKTGSGRYMSKSRSPCSLHSEGSDYQNEVDDDSYVEKNFRRLRSIIVVVG 217

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 218 EENKLKTFVGNEQQEVTNQLSDDHPSSGEMDSKDATGKRGLDYVVTKEALVVENEKEVDV 277

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 278 PNYRNSMVVKDGGVQNEGSNKNHGGVTNDHSSDEIKNGCSDNTDSINCIDLESMLRQRAL 337

[Close]

BLAST of Sed0010274 vs. NCBI nr
Match: XP_023535556.1 (transcriptional regulator ATRX isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-47
Identity = 186/539 (34.51%), Postives = 216/539 (40.07%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTSVS    +DD+KV RSR K RKN+K  KKR+ K+SH  QSR+ 
Sbjct: 38  YRHDSPSCSDTDFESSTSVSSSSSEDDKKVRRSRSKTRKNSKPSKKRSKKQSHDHQSREC 97

Query: 87  SPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSAT-SDSLS---CGDGSTTGNESETERQ 146
            P PRKRKHS R DR E KKT+KKK RRDVSV AT SDSLS   CGDGS+T ++SE +R+
Sbjct: 98  PPHPRKRKHSKRSDRYEAKKTNKKKRRRDVSVGATNSDSLSRSTCGDGSSTSSDSEIDRR 157

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 158 RGRSGKRKRNMVKTEGRRYRSKSRSPCSLCSDGGDFQNEVEDDSYVENSCRRLKSIIVVV 217

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 218 GEEDELKTFVGNEQQEAVTHQLDENHPSFGDMNSKDGTSKRELDYVISKEAPEVESKNKI 277

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 278 VTPDNRNSLILNDDGVRNEGSNKNHGGVTNDHSLDERKNGCSGNTDSINCINLESILRQK 337

[Close]

BLAST of Sed0010274 vs. ExPASy TrEMBL
Match: A0A6J1CDR0 (uncharacterized protein LOC111010601 OS=Momordica charantia OX=3673 GN=LOC111010601 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.5e-50
Identity = 193/539 (35.81%), Postives = 211/539 (39.15%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTS+S    +DDEKVGRSR    KNAK GKKRA KRS   Q RD 
Sbjct: 35  YRHDSPSCSDTDFESSTSLSSSSSEDDEKVGRSRSNKLKNAKPGKKRAKKRSRDDQIRDL 94

Query: 87  SPRPRKRKHSIRDDRSEVKKTDK-KKHRRDVSVSATS-DSLS---CGDGSTTGNESETER 146
           SP PRKRKHS R DR EVKKT+K KK RRDVSVSATS DSLS   CGDGSTT NESE +R
Sbjct: 95  SPHPRKRKHSKRHDRCEVKKTNKRKKRRRDVSVSATSRDSLSCSTCGDGSTTSNESEIDR 154

Query: 147 Q----------------------------------------------------------- 206
                                                                       
Sbjct: 155 HRGRSGKRKRNRGKTERSRYRSKSHSPCSLCSEGSDYQNEVEDGSYVENNFRRLRSVIVV 214

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 215 VGEENKLKTFDGNEQQEEVMHHPDDDHPSFGDMDSNDGMSKRELDRVTSNEASEVENKKE 274

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 275 VVIPDIRNFLVVKDGGVQNEGSNNNHGGVTNDHPLNEGNNGSGNTDRINCIDLESILRQR 334

[Close]

BLAST of Sed0010274 vs. ExPASy TrEMBL
Match: A0A5D3DWF0 (NK-tumor recognition protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001650 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-47
Identity = 182/536 (33.96%), Postives = 208/536 (38.81%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTSV     +DD+KV RSR K RKN K  KKR  K+SH RQSR+ 
Sbjct: 21  YRHDSPSCSDTDFESSTSVPSSSSEDDKKVRRSRSKTRKNVKPSKKRFKKQSHDRQSREC 80

Query: 87  SPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSATSDSLS---CGDGSTTGNESETERQ- 146
           SP PRKRKHS R+DR EV K +KKK RRDVSV   SDSLS   CG+G+TT NESE  R+ 
Sbjct: 81  SPNPRKRKHSKRNDRREVNKANKKKRRRDVSV-GHSDSLSCSTCGNGTTTSNESEVVRRR 140

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 141 GRFAKRKGNMRKTGSGRYMSKSRSPCSLHSEGSDYQNEVDDDSYVEKNFRRLRSIIVVVG 200

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 201 EENKLKTFVGNEQQEVTNQLSDDHPSSGEMDSKDATGKRGLDYVVTKEALVVENEKEVDV 260

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 261 PNYRNSMVVKDGGVQNEGSNKNHGGVTNDHSSDEIKNGCSDNTDSINCIDLESMLRQRAL 320

[Close]

BLAST of Sed0010274 vs. ExPASy TrEMBL
Match: A0A1S3CJV0 (uncharacterized protein LOC103501777 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501777 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-47
Identity = 182/536 (33.96%), Postives = 208/536 (38.81%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTSV     +DD+KV RSR K RKN K  KKR  K+SH RQSR+ 
Sbjct: 38  YRHDSPSCSDTDFESSTSVPSSSSEDDKKVRRSRSKTRKNVKPSKKRFKKQSHDRQSREC 97

Query: 87  SPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSATSDSLS---CGDGSTTGNESETERQ- 146
           SP PRKRKHS R+DR EV K +KKK RRDVSV   SDSLS   CG+G+TT NESE  R+ 
Sbjct: 98  SPNPRKRKHSKRNDRREVNKANKKKRRRDVSV-GHSDSLSCSTCGNGTTTSNESEVVRRR 157

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 158 GRFAKRKGNMRKTGSGRYMSKSRSPCSLHSEGSDYQNEVDDDSYVEKNFRRLRSIIVVVG 217

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 218 EENKLKTFVGNEQQEVTNQLSDDHPSSGEMDSKDATGKRGLDYVVTKEALVVENEKEVDV 277

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 278 PNYRNSMVVKDGGVQNEGSNKNHGGVTNDHSSDEIKNGCSDNTDSINCIDLESMLRQRAL 337

[Close]

BLAST of Sed0010274 vs. ExPASy TrEMBL
Match: A0A1S3CKB4 (uncharacterized protein LOC103501777 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501777 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-47
Identity = 182/536 (33.96%), Postives = 208/536 (38.81%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTSV     +DD+KV RSR K RKN K  KKR  K+SH RQSR+ 
Sbjct: 59  YRHDSPSCSDTDFESSTSVPSSSSEDDKKVRRSRSKTRKNVKPSKKRFKKQSHDRQSREC 118

Query: 87  SPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSATSDSLS---CGDGSTTGNESETERQ- 146
           SP PRKRKHS R+DR EV K +KKK RRDVSV   SDSLS   CG+G+TT NESE  R+ 
Sbjct: 119 SPNPRKRKHSKRNDRREVNKANKKKRRRDVSV-GHSDSLSCSTCGNGTTTSNESEVVRRR 178

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 179 GRFAKRKGNMRKTGSGRYMSKSRSPCSLHSEGSDYQNEVDDDSYVEKNFRRLRSIIVVVG 238

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 239 EENKLKTFVGNEQQEVTNQLSDDHPSSGEMDSKDATGKRGLDYVVTKEALVVENEKEVDV 298

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 299 PNYRNSMVVKDGGVQNEGSNKNHGGVTNDHSSDEIKNGCSDNTDSINCIDLESMLRQRAL 358

[Close]

BLAST of Sed0010274 vs. ExPASy TrEMBL
Match: A0A0A0L248 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G630530 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.2e-46
Identity = 178/534 (33.33%), Postives = 209/534 (39.14%), Query Frame = 0


Query: 27  FRRNSPSCSDTDFESSTSVSCLVPKDDEKVGRSRPKMRKNAKYGKKRANKRSHGRQSRDY 86
           +R +SPSCSDTDFESSTSV     +  ++V RSR K +KNAK  KKR+ K+SH RQSR+ 
Sbjct: 38  YRHDSPSCSDTDFESSTSVPSSSSEHHKRVRRSRSKTQKNAKPSKKRSKKQSHDRQSREC 97

Query: 87  SPRPRKRKHSIRDDRSEVKKTDKKKHRRDVSVSATSDSLS---CGDGSTTGNESETERQ- 146
           SP PRKRKHS R+DR EV K +KKK RRDVSV   S+SLS   CG+GSTT NESE  R+ 
Sbjct: 98  SPNPRKRKHSKRNDRREVNKANKKKRRRDVSV-GHSNSLSCSTCGNGSTTSNESEVVRRR 157

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 158 GRSGKRKENMRKTESGRYMSKSHSPCSLRSEGSDYQNEVDDESYVENNFRRLRSIIVVVG 217

Query: 207 ------------------------------------------------------------ 266
                                                                       
Sbjct: 218 EENKLYVGNEQEGVTNQPSDDHPSFGDMDSKDATSKRELDYVITKEAPVVENEKEVDVPN 277

Query: 267 ------------------------------------------------------------ 295
                                                                       
Sbjct: 278 FRNSMVVEDDGVQNEGSNKNHGGVTNDRSSDEIKNGCSDNTDSINCIDLESMLRQRALEN 337

The following BLAST results are available for this feature:

BLAST of Sed0010274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897880.1	3.0e-50	35.06	histone-lysine N-methyltransferase SETD2 isoform X1 [Benincasa hispida]	[more]
XP_022139776.1	1.1e-49	35.81	uncharacterized protein LOC111010601 [Momordica charantia]	[more]
XP_008463689.1	4.0e-47	33.96	PREDICTED: uncharacterized protein LOC103501777 isoform X1 [Cucumis melo]	[more]
XP_008463691.1	4.0e-47	33.96	PREDICTED: uncharacterized protein LOC103501777 isoform X2 [Cucumis melo]	[more]
XP_023535556.1	4.0e-47	34.51	transcriptional regulator ATRX isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0010274 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0010274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDR0	5.5e-50	35.81	uncharacterized protein LOC111010601 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5D3DWF0	1.9e-47	33.96	NK-tumor recognition protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CJV0	1.9e-47	33.96	uncharacterized protein LOC103501777 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CKB4	1.9e-47	33.96	uncharacterized protein LOC103501777 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L248	6.2e-46	33.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G630530 PE=4 SV=1	[more]

BLAST of Sed0010274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..165
None	No IPR available	PANTHER	PTHR36808	TRANSCRIPTIONAL REGULATOR ATRX-LIKE PROTEIN	coord: 28..143 coord: 146..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010274.1	Sed0010274.1	mRNA