Sed0010239 (gene) Chayote v1

Overview


Name	Sed0010239
Type	gene
Organism	Sechium edule (Chayote v1)
Description	la protein 1-like
Location	LG01: 9566269 .. 9571649 (-)
RNA-Seq Expression	Sed0010239
Synteny	Sed0010239

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTACTCGAAGGCGAAACCCTACTCTCTGTTTGTCTTCTTCTTCTGCAATTCCCGCCTGCGTTTTTTCTTCACCTCAAAGCTCAATCCATGGAGAATTCTTCTCTCGATCAAGAAACCGTCAAGAAAGTGCTCCGTCAGGTTAAGCGCGTTCACAATCTCGCTTCAGTTCATGTTCTAATCAATCTTATTTATATGTTCATCTGTTTGATTTTTCTTCTGCAGGTCGAGTTCTATTTCAGTGACAGCAATCTTCCGAGAGATGGTTTTCTCAAGAATACCATCAGCGAAAGTCCCGATGGAAGTATCCTTCACCTTCTGATAAGATGTTTTTTTTTTGCGTTTTTTTCATCTTTGGTTCTGTTTGTTTAATTTGATTTCAAGTTGTATGGCTTATTTAATCAGTTTTTTTTTTTTTTTCATTTGGATTAGCGTTCTTTATTAGAGTACATTTCGAAGTTCTTTTGTTGATCTTAACTGGGAAATTACAGTGGTGGATTTGTCTTTAATTTGTACGTTTTCTCGGATGAAAAGCCATCTTCATTTGGAACAGAACGTGAAACCAGAAGAGGTTCCAGAAGAGACTCTTAAGGCTGTTGCTGAAACTTTAAAAAGCTCTTCATCTATCAAAGTTTCTGAAGATGGTATAGTTTAGAATTTTTATTTGTTATTGTGTAGAGTGAAATGCAAAGTTTGGAGTTATGGAAAAACCAGCATGTTCCCTTAGCCATTACTGCATCATTATCTGTTGCATTGCATATAAATGTTCAGCTTTTAATGTCGTAAATTCTTTTATTAACTGCTGATATGGTGGATGGATGATGCAGAATCCTTACATTTATGAAAATGCATTTGAATAAATCGACACACTTCATTATTTAGATTAGCTCCTCTGCAATTTTCTGTTGTATCCCATTCCAGTTTATCAATTGTTATGGATTTTTCAAATCATCTTCATAATGAGTTGGCCTTTGCATGCTTCAGGGAAGAAGATTGGCAGAACTACTGAACTTGCAAAGCCTGAGGAGATGATAGAGCAGTTGGATGATAGAACTATAGCTGCATCACCATTTGAATATGATGTCAAGCTTGAAGATGTTGAAGCTTTCTTTGGTCTAATTGCAAAGGTAGATTCTTGTTTTTGACATTGATGTTAATTTCTATATTGGATTCCACATATCTTTGCTGATATCACGTTACAAGCTAATGTCATCATTTTCATCATTGGTTAGCTAGGTTACGTTTGTTAGTAAGATCTTTTGGACAAATTTTAGTAGCTTTGTTTTGTTTCTCTTCGTAATAATTTCACAAACACTTGGTTTTAGCGTTTCCTCTATTTTCCTTGATTTTCCGACTTTAATTGATTGTTTCATCATTTTGTTATGCATAATACATCAATGGCGCCTAATCCTATTCTGTTGGTTTTAATTGGGTTTTATTAAGAACCTTTGTCAAATTTCCGTTTTCCCCCTTTCTTTCTCTATGCATAAAATAATTTTTTCACTGATTTTCAGGTTAACAGTGTGAGGCTTCCCCGTCATGTTTCGGATAAACGGGTATTCTGTGGAACTGCTTTGGTAGAATTTTCTACCGAAGAAGATGCAGAAAAAGTTATGGCGGAAAGCTTGCTTTTTGCCGGTGCCAAATTAGAATTGAAACCAAAGTAAGTACATAAAACACAGTAAGCATGCACATCTGTATTTGCCTTCCAAGTTTTTTCTTCCAGAATGGGAAGGTGATCTTCCAGGCATATGTGGCTTAAAATTGAATTTGAGTTGAAAAGATACTCGCAACATTGAGTTCATGCGTTGTGATTATGAGAATTATATAAAAGTATAGAAGAAGAGAACCTTACACCCAGAAATCGTTGCAATTCTAGATTAGGATTAGATTGAAGATTCTGCTGATCGTTTTTAATGTTGCAAACAATGGTCTATATGATAGGATTTGCACGTTCTTTTACCTTTTCTGTTGTACCTTTGGAAGGGCTTATTGGTATTTTAGGCTGGGTAAATATTTAACTGCCAGATTTCAATACTATGTTTTGGATATGGGAAGCATGAACACTCTGTTTTAGGAAGTGTCTGTGTTGGACATGTGTAGGTCATGGATACTTACATTGATGTATGTAAAGTTACAAAAGGTAAAATCCTTTAGAATTACAAAAAGCTTTTCGAGCGAGACAAAAGAGTTGATAGGCTATAGTCCTTCAAGGGAGAAATAGAGTGAGCCCATGACATACGTTTTCCAATGGGACAAAAGAGTAGATCAGCTACATGCTCCGGACTCTTCCATTTACATGTCACTTATTATTATTATTATTATTATTTCAATTTCAGACGCATGTAAAACAAGCTGCGGACACACATTGGGCACACTAGGCAATTTTTGAACCGAAAAAGCCTAGCCTATCTACTTTGAGCCCAAAGGACCATATAATTTTATATTTTAAACACAAAAGACATTAAAAAAACATAAATTGAAACAAAAAGTTCAAAACAGGTTTTCTATTTCCTTGTTGCAGATATAATGTTAACAGTTTGCTTTTGTATTTACCCTTGTTTTTATTGAACACTTGGTAGTTGAATGTTGGATAATGTATTTTGTACTACTACTACTACTACTACTATGGTTAATTAACTTGACATATTATGCTTTTTAGTTGATAAATTTAGCATTTTTTTAAAAAAAGTTTTTTTATTAAAACAGAAAAATTTATCCCCAATTTGTGTGTTGTTTATCAATTAGTTTACTTCTATATTTTGAAGAATGATTAGTTAGTTTAGTTGATATTTATTCTTCCTAGTTCTAGCCATGGTTGAAGTGCGAGACTCTAGTTTAAATTTGTCTTTAGTCTTTACTTGCTTGAGAGACTTTTTCCTTTTAACCTAGTATTTACTTGAATTACAATGATATTCAAACGTCATTTTGTTCTAATTTGTATGTTTGTGAAAAGCATAAGATTCGTGATGATTGTAAGCATTGATTTAATATATTCCAAATGACATATAAGTCAACCACATCTCTAAAGAATATTTCCATTTCAGGAGAGATTTTGATGAGGAAAGAGCAAAAGAGACGGAGAAGTTTGAAAGTTCTCAGTCAAACCCGAAGAATAATCATTCCTCGGAAGCGAAGTATGTTGTATAGGCCTGTAGTAGTGATATCCAGTATTCTTACCCATACACTTCTCTTGTTTACATGATGCTACTCATGATTATTGCAGCTACCCGAAAGGCTTACTGGTCTCTTTTACATTGAAAAAGCTGTCAGCTGGAAGTTCCGCTGAGGAAAATGGTTCTCATGATGCAGCCACTGATAAGACTGAAAGCAAAGAAGATGAAGGATTAGATTCTTCAAAGAATGACTCTGAGAAAACTGAGGAAACAGGGGAAGCAAATGTGGGCAAGGATGAAAAGATTCCGAAAAGTTCTGATGATAAGAAAAATGATTCAGGCAATGAAGGAAAACCTGACGTGGAAGATCAGTCTATGGAGGAAGATCCCATTGATGAACACAAAGAGGCTGAAGGAAAAAAATCCTCATTCGCATTGTCCATAAACAACAAGAATGTTGTTTCACGCGAGGATTTGAAGGATATTTTCCAGAAGTTTGGATGTGTCAAGGTATTTCATAGATTCTCTTGCTCATAGAAATGCTGTGCTCTTCAGAATGCTTCAAGAATATTTATTTTAAAATTTTGTTCCATACTTTTTCTAGCAGTTTATCTTCCTTCCTATTTTTTGGTTCATGGTAAACTGATTTTGCCTCGTCAATTTTGTTCTATTTCATTCGTGCTATTGTGAAATTCCAACCTAAGTGTGTTAGTATGAACTGTGAGTGAGTGTGTATGTGTGTGTATTTTTTTTATATACATATTTTAAAATTTAAATTATCACCTTCCATATATTCCTTAATTGATTTGACATTTAAAAACTATTTGGACTTCGATTCATGTTTTTGACATTCATATCACTTTTCTGTTTTCATTTCTCATATGCTGCTGCTAATATAAAGATTATTCATTTTGACACCATTTCCATTTCTGTGAAGTACGTTGATTTTAAGATTGGAGAAGAGACGGGTTATATCAGGTTTGAGGAGCCTGAAGCTGCACAGAAAGCTCGTGCGGCTGCAGTTCTTGCGGAACAAGGGGGACTGGCTGTGAAGAATTTTATAGCCACTTTAGAACCAGTGTCAGGTGCCATACAAAATTTCACTGTTCTTTAAGCAACGAGTATATATATCTTTCCAAATGAAGTAAAAATAGTACAGTAGTGTAACTTTTCTGTTCTCTCAGTTAATAATCTCAGTTGCAACCCAGGTTTTTTCGACTCAACTCTTTATTTTTTTGAATATGTTGTTTCTTTCCATTCGTTTTTTTTTACTTTGTCTTATAGTCTGCTGAGAATAAACGTTTTGCTCTTTTGCTTCAAAACATTACTGAAGTTTTTTTTTGGTATCTGAACTATTCGGACCAGACTGACTACTGCATGGCCTACAATATTTAGTTGCTCTTTTGCTTCAAAACATTACTAAAGATAAATCCTCGATACTGATCAATGTTTTCAATTTAATGTTTGCCAAGAATAAACGTTTTGATTTTGAAGACAAAACGTTATTGAAGAAGAAATCTTCGATGTTGATTAAATTTTTTGTCATTCAATGTCGGTATGGTCACAATTCCTGGAGGAGCAATGCTTGATATGTGATAACTTTCATCATCTCTGACAATGCTTTTGGATTAGTATCAAACAACATATTTCATGAAATTGAAATTACTTGTGATCTCTTGAGTGAATGCTATCCTTTGGACAACTTTGATCCTAGGTGACGCTGAGAAGGAGTATTGGAAAGCACTTCGCAGCGGTCAAGATAAGCGTCAACGCGATTTTAAGGGCAACCGCGGGAGGTTTGTGTTCTTTAACAATTCGTGCTATTCGAAACTGTTATTGAAAGCTCATGCTGAATTTTCACTCCTATCTCTTTCATAATCTTCTATGTTTCTCTGCTACTTTCTATTTCTATAGGGGTGGTAAATTCAACAGAGGTGGAAAGCATGGTCGGCCGAGAGGACACGACAACAACCGAGGTCGCCCGTATAAAGCTCAAAAAGTTTGAGCTGCTTGAAGGATGAAAAACTGTCTTATGGCACTCAGCTACAATTTTTCTGGATTCCTTCGAAAAGATTTTGGAGGGGAGAAAAGCACTTCGCATCTGGATCTTCTAGTTTTATTTTAATTTATTCGTCAGCCTCTTGTTTAGTTTAGGTTGTCTTTTCTATATTTTGAATTCTTATTTCTAAAGTAGTATTTAAATTAAACATATAGTTAACCAAGCCCTCTTTTATTTCTTGGTTTTTTTATATTTTTTATTCTTTTC

mRNA sequence

CAGTACTCGAAGGCGAAACCCTACTCTCTGTTTGTCTTCTTCTTCTGCAATTCCCGCCTGCGTTTTTTCTTCACCTCAAAGCTCAATCCATGGAGAATTCTTCTCTCGATCAAGAAACCGTCAAGAAAGTGCTCCGTCAGGTCGAGTTCTATTTCAGTGACAGCAATCTTCCGAGAGATGGTTTTCTCAAGAATACCATCAGCGAAAGTCCCGATGGAATGGTGGATTTGTCTTTAATTTGTACGTTTTCTCGGATGAAAAGCCATCTTCATTTGGAACAGAACGTGAAACCAGAAGAGGTTCCAGAAGAGACTCTTAAGGCTGTTGCTGAAACTTTAAAAAGCTCTTCATCTATCAAAGTTTCTGAAGATGGGAAGAAGATTGGCAGAACTACTGAACTTGCAAAGCCTGAGGAGATGATAGAGCAGTTGGATGATAGAACTATAGCTGCATCACCATTTGAATATGATGTCAAGCTTGAAGATGTTGAAGCTTTCTTTGGTCTAATTGCAAAGGTTAACAGTGTGAGGCTTCCCCGTCATGTTTCGGATAAACGGGTATTCTGTGGAACTGCTTTGGTAGAATTTTCTACCGAAGAAGATGCAGAAAAAGTTATGGCGGAAAGCTTGCTTTTTGCCGGTGCCAAATTAGAATTGAAACCAAAGAGAGATTTTGATGAGGAAAGAGCAAAAGAGACGGAGAAGTTTGAAAGTTCTCAGTCAAACCCGAAGAATAATCATTCCTCGGAAGCGAACTACCCGAAAGGCTTACTGGTCTCTTTTACATTGAAAAAGCTGTCAGCTGGAAGTTCCGCTGAGGAAAATGGTTCTCATGATGCAGCCACTGATAAGACTGAAAGCAAAGAAGATGAAGGATTAGATTCTTCAAAGAATGACTCTGAGAAAACTGAGGAAACAGGGGAAGCAAATGTGGGCAAGGATGAAAAGATTCCGAAAAGTTCTGATGATAAGAAAAATGATTCAGGCAATGAAGGAAAACCTGACGTGGAAGATCAGTCTATGGAGGAAGATCCCATTGATGAACACAAAGAGGCTGAAGGAAAAAAATCCTCATTCGCATTGTCCATAAACAACAAGAATGTTGTTTCACGCGAGGATTTGAAGGATATTTTCCAGAAGTTTGGATGTGTCAAGTACGTTGATTTTAAGATTGGAGAAGAGACGGGTTATATCAGGTTTGAGGAGCCTGAAGCTGCACAGAAAGCTCGTGCGGCTGCAGTTCTTGCGGAACAAGGGGGACTGGCTGTGAAGAATTTTATAGCCACTTTAGAACCAGTGTCAGGTGACGCTGAGAAGGAGTATTGGAAAGCACTTCGCAGCGGTCAAGATAAGCGTCAACGCGATTTTAAGGGCAACCGCGGGAGGGGTGGTAAATTCAACAGAGGTGGAAAGCATGGTCGGCCGAGAGGACACGACAACAACCGAGGTCGCCCGTATAAAGCTCAAAAAGTTTGAGCTGCTTGAAGGATGAAAAACTGTCTTATGGCACTCAGCTACAATTTTTCTGGATTCCTTCGAAAAGATTTTGGAGGGGAGAAAAGCACTTCGCATCTGGATCTTCTAGTTTTATTTTAATTTATTCGTCAGCCTCTTGTTTAGTTTAGGTTGTCTTTTCTATATTTTGAATTCTTATTTCTAAAGTAGTATTTAAATTAAACATATAGTTAACCAAGCCCTCTTTTATTTCTTGGTTTTTTTATATTTTTTATTCTTTTC

Coding sequence (CDS)

ATGGAGAATTCTTCTCTCGATCAAGAAACCGTCAAGAAAGTGCTCCGTCAGGTCGAGTTCTATTTCAGTGACAGCAATCTTCCGAGAGATGGTTTTCTCAAGAATACCATCAGCGAAAGTCCCGATGGAATGGTGGATTTGTCTTTAATTTGTACGTTTTCTCGGATGAAAAGCCATCTTCATTTGGAACAGAACGTGAAACCAGAAGAGGTTCCAGAAGAGACTCTTAAGGCTGTTGCTGAAACTTTAAAAAGCTCTTCATCTATCAAAGTTTCTGAAGATGGGAAGAAGATTGGCAGAACTACTGAACTTGCAAAGCCTGAGGAGATGATAGAGCAGTTGGATGATAGAACTATAGCTGCATCACCATTTGAATATGATGTCAAGCTTGAAGATGTTGAAGCTTTCTTTGGTCTAATTGCAAAGGTTAACAGTGTGAGGCTTCCCCGTCATGTTTCGGATAAACGGGTATTCTGTGGAACTGCTTTGGTAGAATTTTCTACCGAAGAAGATGCAGAAAAAGTTATGGCGGAAAGCTTGCTTTTTGCCGGTGCCAAATTAGAATTGAAACCAAAGAGAGATTTTGATGAGGAAAGAGCAAAAGAGACGGAGAAGTTTGAAAGTTCTCAGTCAAACCCGAAGAATAATCATTCCTCGGAAGCGAACTACCCGAAAGGCTTACTGGTCTCTTTTACATTGAAAAAGCTGTCAGCTGGAAGTTCCGCTGAGGAAAATGGTTCTCATGATGCAGCCACTGATAAGACTGAAAGCAAAGAAGATGAAGGATTAGATTCTTCAAAGAATGACTCTGAGAAAACTGAGGAAACAGGGGAAGCAAATGTGGGCAAGGATGAAAAGATTCCGAAAAGTTCTGATGATAAGAAAAATGATTCAGGCAATGAAGGAAAACCTGACGTGGAAGATCAGTCTATGGAGGAAGATCCCATTGATGAACACAAAGAGGCTGAAGGAAAAAAATCCTCATTCGCATTGTCCATAAACAACAAGAATGTTGTTTCACGCGAGGATTTGAAGGATATTTTCCAGAAGTTTGGATGTGTCAAGTACGTTGATTTTAAGATTGGAGAAGAGACGGGTTATATCAGGTTTGAGGAGCCTGAAGCTGCACAGAAAGCTCGTGCGGCTGCAGTTCTTGCGGAACAAGGGGGACTGGCTGTGAAGAATTTTATAGCCACTTTAGAACCAGTGTCAGGTGACGCTGAGAAGGAGTATTGGAAAGCACTTCGCAGCGGTCAAGATAAGCGTCAACGCGATTTTAAGGGCAACCGCGGGAGGGGTGGTAAATTCAACAGAGGTGGAAAGCATGGTCGGCCGAGAGGACACGACAACAACCGAGGTCGCCCGTATAAAGCTCAAAAAGTTTGA

Protein sequence

MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHLHLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESLLFAGAKLELKPKRDFDEERAKETEKFESSQSNPKNNHSSEANYPKGLLVSFTLKKLSAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQKFGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKEYWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV

Homology

[Close]

BLAST of Sed0010239 vs. NCBI nr
Match: XP_023537626.1 (la protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 716.5 bits (1848), Expect = 1.5e-202
Identity = 388/471 (82.38%), Postives = 426/471 (90.45%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TI  SPDGMVDLSL+C+FSRMK HL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
           HL Q+VKP+ +PE+T+KAVAETLKSSS+IKVSEDGKKIGR  EL+KPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPF+YDVKLEDVEAFFG IAKVNSVRLPRHVSDKRVFCGTALVEFS EEDAEKV+AESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELKPKRDFDEER+KETEKFESS+SN     KNN+SSE+NYPKGL+V+F LKK+
Sbjct: 181 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFALKKM 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSD---- 300
           +AGSSAEENGSHD  TDKTE K DEGLDSSKNDSEKTE+TG  NVGKDE+I KSSD    
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEKTEQTGGENVGKDEEIQKSSDDKIE 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKNDSGNE KP+VEDQSM +DP DE +EAE +K +FA S N+KNVVSREDLK IFQK
Sbjct: 301 EADKKNDSGNEEKPEVEDQSM-DDPTDEREEAE-EKPTFASSRNDKNVVSREDLKAIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG +KY+DFK+GEE+GYIRF+EPEAAQKARAAAVLA+QGGLAVKNFIATLEPVSG+AEKE
Sbjct: 361 FGSIKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           YW+ALRS Q+K  RDFKGNRGRGGKFNRGGKHGR RG+DNNRGRP KAQKV
Sbjct: 421 YWRALRSSQEKHHRDFKGNRGRGGKFNRGGKHGRSRGYDNNRGRPNKAQKV 469

[Close]

BLAST of Sed0010239 vs. NCBI nr
Match: XP_022951846.1 (la protein 1-like [Cucurbita moschata])

HSP 1 Score: 711.1 bits (1834), Expect = 6.4e-201
Identity = 385/471 (81.74%), Postives = 424/471 (90.02%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TI  SPDGMVDLSL+C+FSRMK HL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
           HL Q+VKP+ +PE+T+KAVAETLKSSS+IKVSEDGKKIGR  EL+KPEEM+EQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPF+YDVKLEDVEAFFG IAKVNSVRLPRHVSDKRVFCGTALVEFS EEDAEKV+ ESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLTESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELK KRDFDEER+KETEKFESS+SN     KNN+SSE+NYPKGL+V+F LKK+
Sbjct: 181 LYAGAKLELKSKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFALKKM 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSD---- 300
           +AGSSAEENGSHD  TDKTE K DEGLDSSKNDSEKTE+TG  NVGKDE+I KSSD    
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEKTEQTGGENVGKDEEIQKSSDDKIE 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKNDSGNE KP+VEDQSM +DP DE +EAE +K +FA S N+KNVVSREDLK IFQK
Sbjct: 301 EADKKNDSGNEEKPEVEDQSM-DDPTDEREEAE-EKPTFASSRNDKNVVSREDLKAIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG +KY+DFK+GEE+GYIRF+EPEAAQKARAAAVLA+QGGLAVKNFIATLEPVSG+AEKE
Sbjct: 361 FGSIKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           YW+ALRS Q+K  RDFKGNRGRGGKFNRGGKHGR RG+DNNRGRP KAQKV
Sbjct: 421 YWRALRSSQEKHHRDFKGNRGRGGKFNRGGKHGRSRGYDNNRGRPNKAQKV 469

[Close]

BLAST of Sed0010239 vs. NCBI nr
Match: XP_023002329.1 (la protein 1-like [Cucurbita maxima])

HSP 1 Score: 710.7 bits (1833), Expect = 8.3e-201
Identity = 386/471 (81.95%), Postives = 426/471 (90.45%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TIS S DGMVDLSL+C+FSRMK HL
Sbjct: 1   MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
           HL Q+VKP+ +PE+TLKAVAETLKSSS+IKVSEDGKKIGR  EL+KPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPF+YDVKLEDVEAFFG IAKVNSVRLPRHVSDKRVFCGTALVEFS EEDAEKV+AESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELKPKRDFDEER+KETEKFESS+SN     KNN+SSE+NYPKGL+V+FTLKK+
Sbjct: 181 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSD---- 300
           +AGSSAEENGSHD  TDKTE K DEGLDSSKNDSE T++TG  NVGK+E+I KSSD    
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKNDSGNE KP+VEDQSM +DP DE +EAE +K +FA S N+KNVVSREDLK IFQK
Sbjct: 301 EADKKNDSGNEEKPEVEDQSM-DDPTDEREEAE-EKPTFASSRNDKNVVSREDLKAIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG +KY+DFK+GEE+GYIRF+EPEAAQKARAAAVLA+QGGLAVKNFIATLEPVSG+AEKE
Sbjct: 361 FGSIKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           YW+ALRS Q+K  RD+KGNRGRGGKFNRGGKHGR RG+DNNRGRP KAQKV
Sbjct: 421 YWRALRSSQEKHHRDYKGNRGRGGKFNRGGKHGRSRGYDNNRGRPNKAQKV 469

[Close]

BLAST of Sed0010239 vs. NCBI nr
Match: KAG7020316.1 (La protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 702.6 bits (1812), Expect = 2.3e-198
Identity = 383/471 (81.32%), Postives = 421/471 (89.38%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TI  SPDGMVDLSL+C+FSRMK HL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
           HL Q+VKP+ +PE+T+KAVAETLKSSS+IKVSEDGKKIGR  EL+KPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPF+YDVKLEDVEAFFG IAKVNSVRLPRHVSDKRVFCGTALVEFS EEDAEKV+ ESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLTESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELK KRDFDEER+KETEKFESS+SN     KNN+SSE+NYPKGL+V+F LKK+
Sbjct: 181 LYAGAKLELKSKRDFDEERSKETEKFESSRSNASSSWKNNNSSESNYPKGLIVAFALKKM 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSD---- 300
           +AGSSAEENGSHD  TDKTE K DEGLDSSKNDSEKTE+T   NVGKDE+I KSSD    
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEKTEQTRGENVGKDEEIQKSSDDKIE 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKNDSG   KP+VEDQSM +DP DE +EAE +K +FA S N+KNVVSREDLK IFQK
Sbjct: 301 EADKKNDSGIGEKPEVEDQSM-DDPTDEREEAE-EKPTFASSRNDKNVVSREDLKAIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG +KY+DFK+GEE+GYIRF+EPEAAQKARAAAVLA+QGGLAVKNFIATLEPVSG+AEKE
Sbjct: 361 FGSIKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           YW+ALRS Q+K  RDFKGNRGRGGKFNRGGKHGR RG+DNNRGRP KAQKV
Sbjct: 421 YWRALRSSQEKHHRDFKGNRGRGGKFNRGGKHGRSRGYDNNRGRPNKAQKV 469

[Close]

BLAST of Sed0010239 vs. NCBI nr
Match: KAG6585400.1 (La protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 689.5 bits (1778), Expect = 2.0e-194
Identity = 376/463 (81.21%), Postives = 413/463 (89.20%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TI  SPDGMVDLSL+C+FSRMK HL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
           HL Q+VKP+ +PE+T+KAVAETLKSSS+IKVSEDGKKIGR  EL+KPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPF+YDVKLEDVEAFFG IAKVNSVRLPRHVSDKRVFCGTALVEFS EEDAEKV+ ESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLTESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELK KRDFDEER+KETEKFESS+SN     KNN+SSE+NYPKGL+V+F LKK+
Sbjct: 181 LYAGAKLELKSKRDFDEERSKETEKFESSRSNASSSWKNNNSSESNYPKGLIVAFALKKM 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSD---- 300
           +AGSSAEENGSHD  TDKTE K DE LDSSKNDSEKTE+T   NVGKDE+I KSSD    
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEELDSSKNDSEKTEQTRGENVGKDEEIQKSSDDKIE 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKNDSGN  KP+VEDQSM +DP DE +EAE +K +FA S N+KNVVSREDLK IFQK
Sbjct: 301 EADKKNDSGNGEKPEVEDQSM-DDPTDEREEAE-EKPTFASSRNDKNVVSREDLKAIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG +KY+DFK+GEE+GYIRF+EPEAAQKARAAAVLA+QGGLAVKNFIATLEPVSG+AEKE
Sbjct: 361 FGSIKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRG 454
           YW ALRS Q+K  RDFKGNRGRGGKFNRGGKHGR RG+DNNRG
Sbjct: 421 YWMALRSSQEKHHRDFKGNRGRGGKFNRGGKHGRSRGYDNNRG 461

[Close]

BLAST of Sed0010239 vs. ExPASy Swiss-Prot
Match: Q93ZV7 (La protein 1 OS=Arabidopsis thaliana OX=3702 GN=LA1 PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 4.0e-113
Identity = 250/467 (53.53%), Postives = 322/467 (68.95%), Query Frame = 0


Query: 6   LDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHLHLEQN 65
           L +ET K VLRQVEFYFSDSNLP D FLK T++ES DG+V L+LIC+FS+M+ +L L  +
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDS 65

Query: 66  VKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASPFE 125
            K +++PE+T+KAVA+TL++SS++K+S+DGKK+GR+TEL K E++IEQL+ RT+AASPF 
Sbjct: 66  -KGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 126 YDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESLLFAGA 185
           YDVK EDVE+FF    KVNSVR+PRHV++ R+F G ALVEF TEEDA+ VM ++L+FAG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 186 KLELKPKRDFDEERAKETEKFESSQ-----------SNPKNNHSSEANYPKGLLVSFTLK 245
           +LELKPK++FD ER K+  KF + Q           S+ KNN + E +YPKGL++SFTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 246 KLSAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDK 305
           + SA     E  S +  TDKT  +E E   +   D++K E TGE                
Sbjct: 246 R-SAEEGTTEQKSSEEPTDKT-MEESETKPADTPDADK-ENTGEVQA------------- 305

Query: 306 KNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQKFGCV 365
                 EG  D +D+  E+  +  HK+             NK+VV REDLK +F KFG V
Sbjct: 306 ------EGAEDEDDEKEEKGALATHKD-------------NKDVVLREDLKAVFGKFGDV 365

Query: 366 KYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKEYWKA 425
           K+VDFK+G ETGY+RF+EPEA+QKARAAAVLA +GGLAVKNFIA LEPV G+AEKEYW  
Sbjct: 366 KFVDFKMGSETGYLRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKEYWTL 425

Query: 426 LRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           LRS   K + D  G  GRGG+  RGG+ GR RG D+  GR  K+QKV
Sbjct: 426 LRS---KDRFDKGGRGGRGGR--RGGRFGRKRGSDSPGGRWNKSQKV 431

[Close]

BLAST of Sed0010239 vs. ExPASy Swiss-Prot
Match: Q0V7U7 (La protein 2 OS=Arabidopsis thaliana OX=3702 GN=LA2 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.5e-72
Identity = 173/417 (41.49%), Postives = 253/417 (60.67%), Query Frame = 0


Query: 4   SSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHLHLE 63
           SS ++ET KK+L QVEFYFSDSNLP DGFL   +++S DG+V L L+C+FSRM++ L L 
Sbjct: 3   SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGL- 62

Query: 64  QNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASP 123
            N+  E++P   ++ VA  L++S  +KVS +G++IGR T+L+KPEE++EQ+  RT+AASP
Sbjct: 63  GNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASP 122

Query: 124 FEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESLLFA 183
           FEY +K+EDV +FF   AKVNSVRLP +++DKR FCGTALVEFS+E+D + ++ +SL++A
Sbjct: 123 FEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYA 182

Query: 184 GAKLELKPKRDFDEERAKETEKFESSQSNPKNNHSSEANYPKGLLVSFTLKKLSAGSSAE 243
           GA L L PK DFD +R    ++   S+S+ +        + +G +V F LK +++     
Sbjct: 183 GADLVLIPKSDFDCQRENMIKQLGKSESHNE--------FRRGQIVKFALKWIASEEKVT 242

Query: 244 ENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDKKNDSGNEGK 303
                 A  +K + KED             +ETG A             D++ ++G    
Sbjct: 243 NKEKPSALKNKIKEKED-------------KETGIA-------------DREKENG---- 302

Query: 304 PDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQKFGCVKYVDFKIGE 363
            D    S+ +D  D+               NN N VS E LKD+FQ+FG V+++++  G 
Sbjct: 303 -DNSCASLCKDNTDQ---------LVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEYSGGL 362

Query: 364 ETGYIRFEEPEAAQKARAAAVLAEQGGLAVK-NFIATLEPVSGDAEKEYWKALRSGQ 420
           ++GY+ F + E A KARAA      GGL VK NF   LE ++G+ E+E WK L S +
Sbjct: 363 DSGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRLSSAE 368

[Close]

BLAST of Sed0010239 vs. ExPASy Swiss-Prot
Match: P33399 (La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-19
Identity = 93/271 (34.32%), Postives = 130/271 (47.97%), Query Frame = 0


Query: 9   ETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHLHLEQNVKP 68
           E + + L+QVEFYFS+ N P D FL+ T +E  DG V +S I TF+RMK +  +++    
Sbjct: 28  EVLDRCLKQVEFYFSEFNFPYDRFLRTT-AEKNDGWVPISTIATFNRMKKYRPVDK---- 87

Query: 69  EEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTEL---AKPEEMIEQLDDRTIAASPFE 128
                     V E L+SS  ++VS DG+ + R   L   A     IEQ + RT+A   F 
Sbjct: 88  ----------VIEALRSSEILEVSADGENVKRRVPLDLTAARNARIEQ-NQRTLAVMNFP 147

Query: 129 Y-DVKL-------EDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMA 188
           + DV+        E++EAFF  + ++N VRL R   +K+ F GT LVEF T  + E  + 
Sbjct: 148 HEDVEASQIPELQENLEAFFKKLGEINQVRLRRDHRNKK-FNGTVLVEFKTIPECEAFLK 207

Query: 189 ---------ESLLFAGAKLELKPKRDFDEERAKETEKFESSQSNPKNNHSSEANYPKGLL 248
                    E L + G KL +  K+ FD +R     K  S +S   N H  + N PK   
Sbjct: 208 SYSNDDESNEILSYEGKKLSVLTKKQFDLQREASKSKNFSGRSRSFNGHKKK-NLPK--- 267

Query: 249 VSFTLKKLSAGSSAEENGSHDAATDKTESKE 260
             F   K   G    +  S   A D  E KE
Sbjct: 268 --FPKNKKKNGKEESKEDSSAIADDDEEHKE 275

[Close]

BLAST of Sed0010239 vs. ExPASy Swiss-Prot
Match: Q7ZWE3 (La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.0e-07
Identity = 90/373 (24.13%), Postives = 168/373 (45.04%), Query Frame = 0


Query: 2   ENSSLDQETVKKVL----RQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMK 61
           +N    +  VK++L    +QVEF+F D NL +D F+K+ I +S DG +D++++ TF+RMK
Sbjct: 30  DNEKKKRSRVKQLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMK 89

Query: 62  SHLHLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDR 121
                  N+  +      +K +A  LK+S+ ++V+++G +I R   L    E  + +D R
Sbjct: 90  -------NLTAD------VKLIARALKNSTIVEVNDEGTRIRRKEPLG---ETPKDVDSR 149

Query: 122 TIAASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMA 181
           T+        V    +E  F     V  + +PR+ S  R   G A VEF T+E A+K + 
Sbjct: 150 TVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKS-TRHSKGFAFVEFETQEQAQKAV- 209

Query: 182 ESLLFAGAKLELKPKRDFDEERAKETEKFES-SQSNPKNNHSSEANYPKGLLVSFTLKKL 241
           E L         KP   F +   K+   F++ +Q N ++    +            LK  
Sbjct: 210 EMLNNPPEDAPRKP-GIFPKTCRKKAVPFDAVTQDNDEDGKKKKTE----------LKNS 269

Query: 242 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTE------ETGEANVGKDE----- 301
           ++  +   N   D   + T + E      +   S+K +      ++ EA+ G+D+     
Sbjct: 270 TSEETGSNNMDQDGMLESTVTSEPNLATLTSTVSKKAKKKRLRSQSFEASSGEDQFEMSS 329

Query: 302 ---KIPKSSDDKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNK----NV 352
              K+ +   + K+ S      ++     ++D + + K    KK    L +  +     V
Sbjct: 330 KMRKVEEEKSELKDLSSENKDEELNSLKKKDDSVLKAKRKRKKKLKERLKVGEEVIPLRV 373

[Close]

BLAST of Sed0010239 vs. ExPASy Swiss-Prot
Match: Q5XI01 (La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 5.5e-06
Identity = 87/348 (25.00%), Postives = 148/348 (42.53%), Query Frame = 0


Query: 8   QETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHLHLEQNVK 67
           ++ +  + +QV+F+F D+NL +D FL+  I +S DG VD+SL+ +F++MK          
Sbjct: 27  KQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKK--------- 86

Query: 68  PEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASPFEYD 127
                    K +A  LKSSS +++  +G +I R   L    E  +  ++RT+       +
Sbjct: 87  ----LTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG---ERPKDEEERTVYVELLPKN 146

Query: 128 VKLEDVEAFFGLIAKVNSVRLPRHVS--DKRVFCGTALVEFSTEEDAEKVMAESLLFAGA 187
           V    +E  FG    V  + +P + S  D +   G A VEF T+E A K + E L     
Sbjct: 147 VTHSWIERVFGKCGNVVYISIPHYKSTGDPK---GFAFVEFETKEQAAKAI-EFLNNPPE 206

Query: 188 KLELKP--------KRDFDEER-AKETEKFESSQSNPKNNHSSEANYPKGLLVSFTLKKL 247
           +   KP         +     R A+E +K +  +   K   S +A   K L+V  +   +
Sbjct: 207 EAPRKPGIFPKTVKNKPIPSLRVAEEKKKKKKKKGRIKKEESVQA---KELVVDSSSSGV 266

Query: 248 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDD--- 307
           S  +      S  +  +  E+ +       K D  +T    E+  GK E+     +D   
Sbjct: 267 SKATKRPRTASEGSEAETPEAPKQPAKKKKKRDKVETGGLPESKAGKRERSSAEDEDCLP 326

Query: 308 -----KKNDSGNEGKPDVEDQSMEEDPID----EHKEAEGKKSSFALS 333
                KK    + G P   + S E   ++    E ++  G +   +LS
Sbjct: 327 PRPKLKKRAQKDGGGPAASEVSKEHRDLEFCSTEEEKEPGDRKGDSLS 351

[Close]

BLAST of Sed0010239 vs. ExPASy TrEMBL
Match: A0A6J1GIM1 (la protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454576 PE=4 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 3.1e-201
Identity = 385/471 (81.74%), Postives = 424/471 (90.02%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TI  SPDGMVDLSL+C+FSRMK HL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
           HL Q+VKP+ +PE+T+KAVAETLKSSS+IKVSEDGKKIGR  EL+KPEEM+EQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPF+YDVKLEDVEAFFG IAKVNSVRLPRHVSDKRVFCGTALVEFS EEDAEKV+ ESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLTESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELK KRDFDEER+KETEKFESS+SN     KNN+SSE+NYPKGL+V+F LKK+
Sbjct: 181 LYAGAKLELKSKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFALKKM 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSD---- 300
           +AGSSAEENGSHD  TDKTE K DEGLDSSKNDSEKTE+TG  NVGKDE+I KSSD    
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEKTEQTGGENVGKDEEIQKSSDDKIE 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKNDSGNE KP+VEDQSM +DP DE +EAE +K +FA S N+KNVVSREDLK IFQK
Sbjct: 301 EADKKNDSGNEEKPEVEDQSM-DDPTDEREEAE-EKPTFASSRNDKNVVSREDLKAIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG +KY+DFK+GEE+GYIRF+EPEAAQKARAAAVLA+QGGLAVKNFIATLEPVSG+AEKE
Sbjct: 361 FGSIKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           YW+ALRS Q+K  RDFKGNRGRGGKFNRGGKHGR RG+DNNRGRP KAQKV
Sbjct: 421 YWRALRSSQEKHHRDFKGNRGRGGKFNRGGKHGRSRGYDNNRGRPNKAQKV 469

[Close]

BLAST of Sed0010239 vs. ExPASy TrEMBL
Match: A0A6J1KQ54 (la protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496200 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 4.0e-201
Identity = 386/471 (81.95%), Postives = 426/471 (90.45%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TIS S DGMVDLSL+C+FSRMK HL
Sbjct: 1   MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
           HL Q+VKP+ +PE+TLKAVAETLKSSS+IKVSEDGKKIGR  EL+KPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPF+YDVKLEDVEAFFG IAKVNSVRLPRHVSDKRVFCGTALVEFS EEDAEKV+AESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELKPKRDFDEER+KETEKFESS+SN     KNN+SSE+NYPKGL+V+FTLKK+
Sbjct: 181 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSD---- 300
           +AGSSAEENGSHD  TDKTE K DEGLDSSKNDSE T++TG  NVGK+E+I KSSD    
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKNDSGNE KP+VEDQSM +DP DE +EAE +K +FA S N+KNVVSREDLK IFQK
Sbjct: 301 EADKKNDSGNEEKPEVEDQSM-DDPTDEREEAE-EKPTFASSRNDKNVVSREDLKAIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG +KY+DFK+GEE+GYIRF+EPEAAQKARAAAVLA+QGGLAVKNFIATLEPVSG+AEKE
Sbjct: 361 FGSIKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           YW+ALRS Q+K  RD+KGNRGRGGKFNRGGKHGR RG+DNNRGRP KAQKV
Sbjct: 421 YWRALRSSQEKHHRDYKGNRGRGGKFNRGGKHGRSRGYDNNRGRPNKAQKV 469

[Close]

BLAST of Sed0010239 vs. ExPASy TrEMBL
Match: A0A6J1K750 (la protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492255 PE=4 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 2.0e-184
Identity = 366/472 (77.54%), Postives = 410/472 (86.86%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TIS  PDGMVDLSLICTFSRMK HL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIPDGMVDLSLICTFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
            L+Q+VKPEE+PE+TLKAVAETL+SSS+IKVSEDGKKIGRTTEL KPEE+IEQLDD+TIA
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPFEYDVKLEDVEAFF  IAKVNSVRLPRHV+DKRVFCGTALVEFS EEDAEKV+ ESL
Sbjct: 121 ASPFEYDVKLEDVEAFFNQIAKVNSVRLPRHVADKRVFCGTALVEFSNEEDAEKVLKESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELKPKRDFD+ERAKETE+FESS++N     KNN+  E+NYPKGL+V+FTLK +
Sbjct: 181 LYAGAKLELKPKRDFDKERAKETEEFESSRANSSANRKNNNPPESNYPKGLIVAFTLKSV 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEET-GEANVGKDEKIPKSSD--- 300
           S+GSSAEENGSH  A DKTE K DE LDSSKNDSEKT++   EAN+ KDE+I  + D   
Sbjct: 241 SSGSSAEENGSHCVAADKTECKTDERLDSSKNDSEKTKQIWEEANMSKDEEIKSADDNNG 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKND GNE KP+VE+++   D +DEH+E E +K + A   NN NVVSREDLK IFQK
Sbjct: 301 EADKKNDLGNEEKPEVEERT-TNDTVDEHEEDE-EKPTAAKFKNNMNVVSREDLKVIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG VK++DFKIG+E+GYIRFEEPEAAQKARAAAVLAEQGGLAVK+FIATLEPVSG+AEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARAAAVLAEQGGLAVKSFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNR-GGKHGRPRGHDNNRGRPYKAQKV 462
           YW+ LRS Q+K  RDFKGNRGRGGKFNR GGKH R RGH N++GRP KAQKV
Sbjct: 421 YWRLLRSNQEKHHRDFKGNRGRGGKFNRGGGKHARSRGHGNDQGRPNKAQKV 470

[Close]

BLAST of Sed0010239 vs. ExPASy TrEMBL
Match: A0A6J1HHB2 (la protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462923 PE=4 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 8.4e-183
Identity = 367/476 (77.10%), Postives = 408/476 (85.71%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLK TIS   DGMVDLSLICTFSRMK HL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIADGMVDLSLICTFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
            L+Q+VKPEE+PE+TLKAVAETL+SSS+IKVSEDGKKIGRTTEL KPEE+IEQLDD+TIA
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPFEYDVKLEDVEAFF  IAKVNSVRLPRHV+DKRVFCGTALVEFSTEEDAEKV+ ESL
Sbjct: 121 ASPFEYDVKLEDVEAFFNQIAKVNSVRLPRHVADKRVFCGTALVEFSTEEDAEKVLKESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQSNP----KNNHSSEANYPKGLLVSFTLKKL 240
           L+AGAKLELKPKRDFD ERAKETE+FESS++N     KNN+  E+NYPKGL+V+FTLK +
Sbjct: 181 LYAGAKLELKPKRDFDAERAKETEEFESSRANSSANRKNNNPPESNYPKGLIVAFTLKSV 240

Query: 241 SAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETG-EANVGKDEKIPKSSD--- 300
           S+GSSAEENGSH  A DKTE K DE LDSSKNDSEKTE  G EAN+ KDE+I  + D   
Sbjct: 241 SSGSSAEENGSHGVAADKTECKPDERLDSSKNDSEKTEIIGEEANMSKDEEIKSADDNNG 300

Query: 301 --DKKNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQK 360
             DKKND GNE +P+VE+++   D +DEH+E E +K + A S NN NVVSREDLK IFQK
Sbjct: 301 EADKKNDLGNEERPEVEERT-TNDTVDEHEEDE-EKPTAAKSKNNMNVVSREDLKVIFQK 360

Query: 361 FGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKE 420
           FG VK++DFKIG+E+GYIRFEEPEAAQKARAAAVLAEQGGL VK+FIATLEPVSG+AEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARAAAVLAEQGGLVVKSFIATLEPVSGEAEKE 420

Query: 421 YWKALRSGQDKRQRDFKGNRGRGGKFNR-GGKHGRPRGH----DNNRGRPYKAQKV 462
           YW+ LRS Q+K  RDFK NRGRGGKFNR GGKH R RGH     N+RGRP KAQKV
Sbjct: 421 YWRLLRSNQEKHHRDFKSNRGRGGKFNRGGGKHARSRGHGHCNGNDRGRPNKAQKV 474

[Close]

BLAST of Sed0010239 vs. ExPASy TrEMBL
Match: A0A0A0LP79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375250 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 2.5e-182
Identity = 357/472 (75.64%), Postives = 407/472 (86.23%), Query Frame = 0


Query: 1   MENSSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHL 60
           M N+SLDQE  KKVLRQVEFYFSDSNLPRD FL+ TISESPDG+VDLSLICTFSRMK HL
Sbjct: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESPDGLVDLSLICTFSRMKGHL 60

Query: 61  HLEQNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIA 120
            L+Q+V PE  PE+T+KAVAETL++SSS+KVSEDGKK+GR TEL KPEE+IEQLDDRT+A
Sbjct: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120

Query: 121 ASPFEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESL 180
           ASPFEYD+KLEDVEAFF  + KVNSVRLPRHV+DKRVFCGTAL+EFSTEEDAEKV+ ESL
Sbjct: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFSTEEDAEKVLKESL 180

Query: 181 LFAGAKLELKPKRDFDEERAKETEKFESSQS----NPKNNHSS-EANYPKGLLVSFTLKK 240
           ++AGAKLELKPKR+FDEERAKE EKFESS+S    N  NN+SS EA+YPKGL+V+FTLK 
Sbjct: 181 VYAGAKLELKPKREFDEERAKEMEKFESSRSTSGANRSNNNSSPEASYPKGLIVAFTLKS 240

Query: 241 LSAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDK- 300
            S+GS+AE N SH  A DKTE K DEGLDSSKNDSEKT +  E N+ KDE+I +S+DDK 
Sbjct: 241 TSSGSTAEGNESHGVA-DKTECKTDEGLDSSKNDSEKTVQIEETNLSKDEEIKESADDKN 300

Query: 301 -----KNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQ 360
                KNDSGNE   +VE+QSM +D +DEH+EAE K ++F  S NN NVVSREDLK +F+
Sbjct: 301 GEAVEKNDSGNEKSLEVEEQSM-DDTVDEHEEAEEKPTAFQ-SRNNMNVVSREDLKAVFR 360

Query: 361 KFGCVKYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEK 420
           KFG VK++DFKIG+E+GYIRFEEPEAAQKARA+AVLAEQGGLAVKNFIATLEPVSG+AEK
Sbjct: 361 KFGSVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEK 420

Query: 421 EYWKALRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           EYW  LRS Q+K  RDFKGNRGRGGKFNRGGKHGR RGHDN+RGRP KAQKV
Sbjct: 421 EYWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 469

[Close]

BLAST of Sed0010239 vs. TAIR 10
Match: AT4G32720.1 (La protein 1 )

HSP 1 Score: 409.8 bits (1052), Expect = 2.8e-114
Identity = 250/467 (53.53%), Postives = 322/467 (68.95%), Query Frame = 0


Query: 6   LDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHLHLEQN 65
           L +ET K VLRQVEFYFSDSNLP D FLK T++ES DG+V L+LIC+FS+M+ +L L  +
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDS 65

Query: 66  VKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASPFE 125
            K +++PE+T+KAVA+TL++SS++K+S+DGKK+GR+TEL K E++IEQL+ RT+AASPF 
Sbjct: 66  -KGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 126 YDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESLLFAGA 185
           YDVK EDVE+FF    KVNSVR+PRHV++ R+F G ALVEF TEEDA+ VM ++L+FAG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 186 KLELKPKRDFDEERAKETEKFESSQ-----------SNPKNNHSSEANYPKGLLVSFTLK 245
           +LELKPK++FD ER K+  KF + Q           S+ KNN + E +YPKGL++SFTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 246 KLSAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDK 305
           + SA     E  S +  TDKT  +E E   +   D++K E TGE                
Sbjct: 246 R-SAEEGTTEQKSSEEPTDKT-MEESETKPADTPDADK-ENTGEVQA------------- 305

Query: 306 KNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQKFGCV 365
                 EG  D +D+  E+  +  HK+             NK+VV REDLK +F KFG V
Sbjct: 306 ------EGAEDEDDEKEEKGALATHKD-------------NKDVVLREDLKAVFGKFGDV 365

Query: 366 KYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKEYWKA 425
           K+VDFK+G ETGY+RF+EPEA+QKARAAAVLA +GGLAVKNFIA LEPV G+AEKEYW  
Sbjct: 366 KFVDFKMGSETGYLRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKEYWTL 425

Query: 426 LRSGQDKRQRDFKGNRGRGGKFNRGGKHGRPRGHDNNRGRPYKAQKV 462
           LRS   K + D  G  GRGG+  RGG+ GR RG D+  GR  K+QKV
Sbjct: 426 LRS---KDRFDKGGRGGRGGR--RGGRFGRKRGSDSPGGRWNKSQKV 431

[Close]

BLAST of Sed0010239 vs. TAIR 10
Match: AT4G32720.2 (La protein 1 )

HSP 1 Score: 393.3 bits (1009), Expect = 2.7e-109
Identity = 236/441 (53.51%), Postives = 305/441 (69.16%), Query Frame = 0


Query: 6   LDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHLHLEQN 65
           L +ET K VLRQVEFYFSDSNLP D FLK T++ES DG+V L+LIC+FS+M+ +L L  +
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDS 65

Query: 66  VKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASPFE 125
            K +++PE+T+KAVA+TL++SS++K+S+DGKK+GR+TEL K E++IEQL+ RT+AASPF 
Sbjct: 66  -KGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 126 YDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESLLFAGA 185
           YDVK EDVE+FF    KVNSVR+PRHV++ R+F G ALVEF TEEDA+ VM ++L+FAG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 186 KLELKPKRDFDEERAKETEKFESSQ-----------SNPKNNHSSEANYPKGLLVSFTLK 245
           +LELKPK++FD ER K+  KF + Q           S+ KNN + E +YPKGL++SFTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 246 KLSAGSSAEENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDK 305
           + SA     E  S +  TDKT  +E E   +   D++K E TGE                
Sbjct: 246 R-SAEEGTTEQKSSEEPTDKT-MEESETKPADTPDADK-ENTGEVQA------------- 305

Query: 306 KNDSGNEGKPDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQKFGCV 365
                 EG  D +D+  E+  +  HK+             NK+VV REDLK +F KFG V
Sbjct: 306 ------EGAEDEDDEKEEKGALATHKD-------------NKDVVLREDLKAVFGKFGDV 365

Query: 366 KYVDFKIGEETGYIRFEEPEAAQKARAAAVLAEQGGLAVKNFIATLEPVSGDAEKEYWKA 425
           K+VDFK+G ETGY+RF+EPEA+QKARAAAVLA +GGLAVKNFIA LEPV G+AEKEYW  
Sbjct: 366 KFVDFKMGSETGYLRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKEYWTL 404

Query: 426 LRSGQDKRQRDFKGNRGRGGK 436
           LRS    + R  KG  GRGG+
Sbjct: 426 LRS----KDRFDKG--GRGGR 404

[Close]

BLAST of Sed0010239 vs. TAIR 10
Match: AT1G79880.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-73
Identity = 173/417 (41.49%), Postives = 253/417 (60.67%), Query Frame = 0


Query: 4   SSLDQETVKKVLRQVEFYFSDSNLPRDGFLKNTISESPDGMVDLSLICTFSRMKSHLHLE 63
           SS ++ET KK+L QVEFYFSDSNLP DGFL   +++S DG+V L L+C+FSRM++ L L 
Sbjct: 3   SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGL- 62

Query: 64  QNVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASP 123
            N+  E++P   ++ VA  L++S  +KVS +G++IGR T+L+KPEE++EQ+  RT+AASP
Sbjct: 63  GNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASP 122

Query: 124 FEYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESLLFA 183
           FEY +K+EDV +FF   AKVNSVRLP +++DKR FCGTALVEFS+E+D + ++ +SL++A
Sbjct: 123 FEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYA 182

Query: 184 GAKLELKPKRDFDEERAKETEKFESSQSNPKNNHSSEANYPKGLLVSFTLKKLSAGSSAE 243
           GA L L PK DFD +R    ++   S+S+ +        + +G +V F LK +++     
Sbjct: 183 GADLVLIPKSDFDCQRENMIKQLGKSESHNE--------FRRGQIVKFALKWIASEEKVT 242

Query: 244 ENGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDKKNDSGNEGK 303
                 A  +K + KED             +ETG A             D++ ++G    
Sbjct: 243 NKEKPSALKNKIKEKED-------------KETGIA-------------DREKENG---- 302

Query: 304 PDVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQKFGCVKYVDFKIGE 363
            D    S+ +D  D+               NN N VS E LKD+FQ+FG V+++++  G 
Sbjct: 303 -DNSCASLCKDNTDQ---------LVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEYSGGL 362

Query: 364 ETGYIRFEEPEAAQKARAAAVLAEQGGLAVK-NFIATLEPVSGDAEKEYWKALRSGQ 420
           ++GY+ F + E A KARAA      GGL VK NF   LE ++G+ E+E WK L S +
Sbjct: 363 DSGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRLSSAE 368

[Close]

BLAST of Sed0010239 vs. TAIR 10
Match: AT1G79880.2 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 205.7 bits (522), Expect = 8.1e-53
Identity = 137/356 (38.48%), Postives = 206/356 (57.87%), Query Frame = 0


Query: 65  NVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASPF 124
           N+  E++P   ++ VA  L++S  +KVS +G++IGR T+L+KPEE++EQ+  RT+AASPF
Sbjct: 9   NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPF 68

Query: 125 EYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESLLFAG 184
           EY +K+EDV +FF   AKVNSVRLP +++DKR FCGTALVEFS+E+D + ++ +SL++AG
Sbjct: 69  EYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYAG 128

Query: 185 AKLELKPKRDFDEERAKETEKFESSQSNPKNNHSSEANYPKGLLVSFTLKKLSAGSSAEE 244
           A L L PK DFD +R    ++   S+S+ +        + +G +V F LK +++      
Sbjct: 129 ADLVLIPKSDFDCQRENMIKQLGKSESHNE--------FRRGQIVKFALKWIASEEKVTN 188

Query: 245 NGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDKKNDSGNEGKP 304
                A  +K + KED             +ETG A             D++ ++G     
Sbjct: 189 KEKPSALKNKIKEKED-------------KETGIA-------------DREKENG----- 248

Query: 305 DVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQKFGCVKYVDFKIGEE 364
           D    S+ +D  D+               NN N VS E LKD+FQ+FG V+++++  G +
Sbjct: 249 DNSCASLCKDNTDQ---------LVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEYSGGLD 308

Query: 365 TGYIRFEEPEAAQKARAAAVLAEQGGLAVK-NFIATLEPVSGDAEKEYWKALRSGQ 420
           +GY+ F + E A KARAA      GGL VK NF   LE ++G+ E+E WK L S +
Sbjct: 309 SGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRLSSAE 314

[Close]

BLAST of Sed0010239 vs. TAIR 10
Match: AT1G79880.3 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 205.7 bits (522), Expect = 8.1e-53
Identity = 140/366 (38.25%), Postives = 210/366 (57.38%), Query Frame = 0


Query: 65  NVKPEEVPEETLKAVAETLKSSSSIKVSEDGKKIGRTTELAKPEEMIEQLDDRTIAASPF 124
           N+  E++P   ++ VA  L++S  +KVS +G++IGR T+L+KPEE++EQ+  RT+AASPF
Sbjct: 9   NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPF 68

Query: 125 EYDVKLEDVEAFFGLIAKVNSVRLPRHVSDKRVFCGTALVEFSTEEDAEKVMAESLLFAG 184
           EY +K+EDV +FF   AKVNSVRLP +++DKR FCGTALVEFS+E+D + ++ +SL++AG
Sbjct: 69  EYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYAG 128

Query: 185 AKLELKPKRDFDEERAKETEKFESSQSNPKNNHSSEANYPKGLLVSFTLKKLSAGSSAEE 244
           A L L PK DFD +R    ++   S+S+ +        + +G +V F LK +++      
Sbjct: 129 ADLVLIPKSDFDCQRENMIKQLGKSESHNE--------FRRGQIVKFALKWIASEEKVTN 188

Query: 245 NGSHDAATDKTESKEDEGLDSSKNDSEKTEETGEANVGKDEKIPKSSDDKKNDSGNEGKP 304
                A  +K + KED             +ETG A             D++ ++G     
Sbjct: 189 KEKPSALKNKIKEKED-------------KETGIA-------------DREKENG----- 248

Query: 305 DVEDQSMEEDPIDEHKEAEGKKSSFALSINNKNVVSREDLKDIFQKFGCVKYVDFKIGEE 364
           D    S+ +D  D+               NN N VS E LKD+FQ+FG V+++++  G +
Sbjct: 249 DNSCASLCKDNTDQ---------LVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEYSGGLD 308

Query: 365 TGYIRFEEPEAAQKARAAAVLAEQGGLAVK-NFIATLEPVSGDAEKEYWKALRSGQDKRQ 424
           +GY+ F + E A KARAA      GGL VK NF   LE ++G+ E+E WK L S + +  
Sbjct: 309 SGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRLSSAELEGG 324

Query: 425 RDFKGN 430
            D K N
Sbjct: 369 YDIKPN 324

The following BLAST results are available for this feature:

BLAST of Sed0010239 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537626.1	1.5e-202	82.38	la protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951846.1	6.4e-201	81.74	la protein 1-like [Cucurbita moschata]	[more]
XP_023002329.1	8.3e-201	81.95	la protein 1-like [Cucurbita maxima]	[more]
KAG7020316.1	2.3e-198	81.32	La protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6585400.1	2.0e-194	81.21	La protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0010239 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZV7	4.0e-113	53.53	La protein 1 OS=Arabidopsis thaliana OX=3702 GN=LA1 PE=1 SV=1	[more]
Q0V7U7	1.5e-72	41.49	La protein 2 OS=Arabidopsis thaliana OX=3702 GN=LA2 PE=1 SV=1	[more]
P33399	1.1e-19	34.32	La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=5...	[more]
Q7ZWE3	5.0e-07	24.13	La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1	[more]
Q5XI01	5.5e-06	25.00	La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2	[more]

BLAST of Sed0010239 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIM1	3.1e-201	81.74	la protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454576 PE=4 SV=1	[more]
A0A6J1KQ54	4.0e-201	81.95	la protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496200 PE=4 SV=1	[more]
A0A6J1K750	2.0e-184	77.54	la protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492255 PE=4 SV=1	[more]
A0A6J1HHB2	8.4e-183	77.10	la protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462923 PE=4 SV=1	[more]
A0A0A0LP79	2.5e-182	75.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375250 PE=4 SV=1	[more]

BLAST of Sed0010239 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32720.1	2.8e-114	53.53	La protein 1	[more]
AT4G32720.2	2.7e-109	53.51	La protein 1	[more]
AT1G79880.1	1.1e-73	41.49	RNA recognition motif (RRM)-containing protein	[more]
AT1G79880.2	8.1e-53	38.48	RNA recognition motif (RRM)-containing protein	[more]
AT1G79880.3	8.1e-53	38.25	RNA recognition motif (RRM)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 158..176 score: 33.01 coord: 43..58 score: 36.93 coord: 17..34 score: 69.7
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 8..101 e-value: 2.0E-29 score: 113.8
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 14..84 e-value: 4.5E-21 score: 74.6
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 4..108 score: 23.304012
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 330..401 e-value: 0.11 score: 15.0 coord: 118..190 e-value: 0.0012 score: 28.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 125..177 e-value: 5.9E-6 score: 26.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 117..202 score: 9.695028
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 2..105 e-value: 8.6E-26 score: 91.7
IPR014886	La protein, xRRM domain	PFAM	PF08777	RRM_3	coord: 336..429 e-value: 1.1E-22 score: 80.0
IPR014886	La protein, xRRM domain	PROSITE	PS51939	XRRM	coord: 320..444 score: 22.435558
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 110..207 e-value: 2.3E-13 score: 52.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 316..430 e-value: 4.4E-24 score: 86.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 443..461
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..461
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..223
None	No IPR available	PANTHER	PTHR22792:SF79	OS02G0610400 PROTEIN	coord: 4..461
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 4..461
None	No IPR available	CDD	cd08030	LA_like_plant	coord: 10..100 e-value: 1.12663E-39 score: 135.98
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 116..381
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 8..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010239.1	Sed0010239.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008033	tRNA processing
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding