Sed0010218 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAACAATCCTTCCACGCAGGCCAATCCGAAGGCCAAACCCAGGTACCTAAGAATTGCGTCGAAAAATGATCTCGAGATCCATCTAAACTAGGTCGATATAAGAGTTTCACGATAGAATTTTGTTGAGAAAAAATTACAAAAAAATTGTCATTGACATCTCACATTTATTGTATTTATGAGAATCGTTGAATATGCTATTTTCGTTGTGGGCTCAAGGCTAAGAGCGAAGAGTGGATTGAATCGGGAAAAGAAGCAGCAAACCATGCAAAGGACCGAGCAGCTGACGCTACTCAATCGTGTAAGGAGTCTACCCATGAAACCAAGCAAGAAGCTTCGGGCTTTCTTCAACAGGTTATTCAATATTATACAATTAAATTTACCCCAACTTATTAGCTTACTTTGATTTGATGAGTGGATCTCGTAATTTAACATGATAATTGATACTAAAATAAGTGTATTAATATTGATATTTGAACATTCATAACATGATTTAACAATTGTTCTTTTTGAAAAGACAATTAATTCTTAAAACCATTTTAAATCTTAAATATAAATATGTGTGACTTTGATTTGCAGAAAGGTGAGCAGATGATGCATATGGCTCAGGGTGCTGTGGACAGCATGAAGAATACACTTGGAATGAATAGTACTAATGACAAGAACAATTGA ATGCAACAATCCTTCCACGCAGGCCAATCCGAAGGCCAAACCCAGGCTAAGAGCGAAGAGTGGATTGAATCGGGAAAAGAAGCAGCAAACCATGCAAAGGACCGAGCAGCTGACGCTACTCAATCGTGTAAGGAGTCTACCCATGAAACCAAGCAAGAAGCTTCGGGCTTTCTTCAACAGAAAGGTGAGCAGATGATGCATATGGCTCAGGGTGCTGTGGACAGCATGAAGAATACACTTGGAATGAATAGTACTAATGACAAGAACAATTGA ATGCAACAATCCTTCCACGCAGGCCAATCCGAAGGCCAAACCCAGGCTAAGAGCGAAGAGTGGATTGAATCGGGAAAAGAAGCAGCAAACCATGCAAAGGACCGAGCAGCTGACGCTACTCAATCGTGTAAGGAGTCTACCCATGAAACCAAGCAAGAAGCTTCGGGCTTTCTTCAACAGAAAGGTGAGCAGATGATGCATATGGCTCAGGGTGCTGTGGACAGCATGAAGAATACACTTGGAATGAATAGTACTAATGACAAGAACAATTGA MQQSFHAGQSEGQTQAKSEEWIESGKEAANHAKDRAADATQSCKESTHETKQEASGFLQQKGEQMMHMAQGAVDSMKNTLGMNSTNDKNN Homology
BLAST of Sed0010218 vs. NCBI nr
Match: XP_022157950.1 (late embryogenesis abundant protein 1 [Momordica charantia]) HSP 1 Score: 111.3 bits (277), Expect = 4.4e-21 Identity = 65/90 (72.22%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of Sed0010218 vs. NCBI nr
Match: XP_008353689.1 (late embryogenesis abundant protein 1-like [Malus domestica]) HSP 1 Score: 96.3 bits (238), Expect = 1.4e-16 Identity = 51/83 (61.45%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of Sed0010218 vs. NCBI nr
Match: TQD85463.1 (hypothetical protein C1H46_028986 [Malus baccata]) HSP 1 Score: 95.9 bits (237), Expect = 1.9e-16 Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Sed0010218 vs. NCBI nr
Match: XP_008391284.1 (late embryogenesis abundant protein 1 [Malus domestica] >XP_009343410.1 PREDICTED: late embryogenesis abundant protein 1-like [Pyrus x bretschneideri] >XP_009350115.1 PREDICTED: late embryogenesis abundant protein 1-like [Pyrus x bretschneideri] >KAB2599905.1 late embryogenesis abundant protein 1 [Pyrus ussuriensis x Pyrus communis] >TQD78853.1 hypothetical protein C1H46_035584 [Malus baccata] >RXH78454.1 hypothetical protein DVH24_001972 [Malus domestica]) HSP 1 Score: 94.7 bits (234), Expect = 4.2e-16 Identity = 50/83 (60.24%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Sed0010218 vs. NCBI nr
Match: XP_012842904.1 (PREDICTED: late embryogenesis abundant protein 1-like [Erythranthe guttata] >EYU32610.1 hypothetical protein MIMGU_mgv1a017234mg [Erythranthe guttata]) HSP 1 Score: 94.4 bits (233), Expect = 5.5e-16 Identity = 47/78 (60.26%), Postives = 62/78 (79.49%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04 Identity = 31/85 (36.47%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.7e-04 Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy Swiss-Prot
Match: P13939 (Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.8e-04 Identity = 37/123 (30.08%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy Swiss-Prot
Match: P13934 (Late embryogenesis abundant protein 76 OS=Brassica napus OX=3708 PE=2 SV=2) HSP 1 Score: 44.3 bits (103), Expect = 8.6e-04 Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy TrEMBL
Match: A0A6J1DUG1 (late embryogenesis abundant protein 1 OS=Momordica charantia OX=3673 GN=LOC111024551 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21 Identity = 65/90 (72.22%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy TrEMBL
Match: A0A540LG64 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_028986 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 9.2e-17 Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy TrEMBL
Match: A0A498I8F1 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_001972 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.0e-16 Identity = 50/83 (60.24%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy TrEMBL
Match: A0A5N5FA15 (Late embryogenesis abundant protein 1 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_010176 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.0e-16 Identity = 50/83 (60.24%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Sed0010218 vs. ExPASy TrEMBL
Match: A0A540KXA1 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_035584 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.0e-16 Identity = 50/83 (60.24%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Sed0010218 vs. TAIR 10
Match: AT4G13560.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 65.9 bits (159), Expect = 2.0e-11 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of Sed0010218 vs. TAIR 10
Match: AT1G52680.1 (late embryogenesis abundant protein-related / LEA protein-related ) HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04 Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of Sed0010218 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04 Identity = 33/80 (41.25%), Postives = 43/80 (53.75%), Query Frame = 0
BLAST of Sed0010218 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of Sed0010218 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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