Sed0010199 (gene) Chayote v1

Overview


Name	Sed0010199
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ras-related protein RABA1b-like
Location	LG13: 4235404 .. 4238245 (-)
RNA-Seq Expression	Sed0010199
Synteny	Sed0010199

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAATTGATTTCACACACTTCCTTCCCACTTTTGAGCGCTGCATTTCATCGGCATTTTTTTCTCTCGCAGTATCTCTCTCTGTTCTTCATCTTCAACCTTCCTTTCCCACAAAGTTGAAGCTAAATCGAAGCAACAATGGCCGGTTACAGAGCTGATGATGATTACGACTACCTCTTCAAGGTGGTTCTGATCGGAGACTCCGGCGTCGGCAAGTCCAATCTGCTCTCCAGATTCACCAAGAACGAGTTTAATCTCGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATTCTAAGGTCATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTTTTCTTTCTTCTCTGCTCTTGATTTTTCTTGTTTTTGTTCATTCTCTTTGGTTTTGGTTGATTTGCTTGCTGGTAGTGTGGATTCTGGTTCTTACTTACTCTTTTTATGTGTTGGTTGAATGTTCTGATTCTGCGGTTTAGTCGATTAGCATGTTGCGGTTTGTCGAGTGTGATGTGTAATAACCTAGATCTGTTCGGTATATACAGTGATTTTTGCTTGATTTTGTGTTCTTCTGGTTCAATTGAGTGAAATCATGCTCGTGAAGTTAGTTTTGATGTATTCGGCTTTGTTCTTCAACTTTCATGGTTGTGAGGGTTAGAAAAGTTGGATTCAGGAGGCGTTGGAGGATTCATTGAATAGATTTTAATGTAGTAGTTGGAGATTTGGAAATTTCTGAGCAGATCCTTGTTGAAGAAGGCTCTGGATTCTGTTTTGTAGATCGTGTGGTTTGAGTTTGAGCTATCTGTTTTTAAAATCATATTAGGAACAGGAAGTTTTGATTCCTTCCATTATTCTTTCCCTTGTTCCCCGAGAAGGTATAAAGTTTATTTGGTTTCCTTTTACAGGAATTCGTTTCCTGTTTCCCCAAGTGGGAATAAGTTCAAATTTTCTTTCATATATGGTAGCTACTTTCTGGTTTCTGTTTACTGCAATGGGTACAAGAAAGAACAAAATATGTATAGCAAAGATTTCGTTGCATGTGAATTGAATTTATATAATGTTTTGGGTAAGTAGGGGCATTGAACATAGTCAGTGGCATTTTTATTGATTCTCATTTAAGAGAAGCTTGAACTGGTGCTATGGTTAGTTTAGAAGTAGTTTAGAATATCCTACCAACAAGTCCCAAAGGGGTGGCACAGTGGCTGAAAACTTAGGTTTTGAAGGTATGCTCCCTTCAAGGTCTTAAGTTTGAGACTCACATGTGACATTATTCCGTCGATGTCTCCCGGTGCCTGGCCTAGAGATGGGTGTGGTTACCCCTTTTTTTAAAAAAAAAATCCTACCAACAAGAGAAACTATGTCTGTGTGCTGGAATTGTGTCGTTGTGTGTCGAACCTTTTTTTCTTCCTTGTGCTGGAATTGTGTTGTTGGGGATCAAACCCGTAATCACTTTATTACCAAGTCAAAGTCATACATGATGTTATTTGATCTTTGCTACTTTTAGCCATAACTTCATAACTTGTAAGTTCTTGGCTTCTATACTCACAATAATGAACTTTTATTGCTTCTCAAATTAGCCCAAGTGAAGTGCTCATAAAAACTGAACCTTCTATATATGGAGTGCATTTATTTACTTGAATATATGCTTACTCATGTAATGGTTTTCCCCCAAAAAATCTGTCACTTCTCAACAATTACGAGTCATTTCACACACTTTCCCTTCACAAAATAAGCATCTGACAAAGGAAATCTAAAAGTTATCTGCAGTGATGTGCTGTGATTTTACTTTTTATTTCTGTTGTAATGATGCCTTTGAATGTTGCTTAGTAGATTGCATTCTGTTCTAAATTAGTTGAAAATATCACTTCATCATCCATCAATACCAATCTGCTAGACAGATTGTATGATCTTGTTTTCAATCTCTTTGGTTCTTTCTTCTTTTTTTTTTTATCCTATAAAACAATGAGTGAGCTGTTCAGATCTGTGTGGCTTCTGTGTCTTTAGGTACCGTGCCATCACCAGTGCCTACTATCGTGGAGCAGTCGGTGCACTCCTTGTATACGATGTCACTCGTCACGCAACATTTGAGAATGTGGACCGGTGGCTGAAAGAATTGAAGAACCACACCGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTCCGTCACCTCGTTGCAGTTCCAACCGAAGATGGAAAGTCCTACGCCGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTCGAAGCGGTCAATGTTGAAAAAGCCTTCGCCGAGGTCCTGACTCAGATCTATCACATATTAAGCAAGAAGGCTGTCGAAGGGGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAGAATAAACATCAAAGACGAGTCTGGCTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGGTAATCTGTAAGATGATTTTGGATTTTATGTACTGTAATATTTTTTGTTTGAAGAGAGACAGGAACTAAAAAAGGAAGATAATCCCAAGACCTTCAATCTTGTTGTATTACAAAAGAGGAGTACCTGCCACATGATTGGATTGTGGTTGCTGTTGTGTTCATCATTAGCTTCTACCAAAAAAGAAATATTGGTTTCAAGTTTAGTTTCACTTTCTATGATAAGTGTCCTTCCTTTTAGCTTTTAGCCCTTTTGATTTATATAAGCATTCATGATGTTCTTATGTTGATGATGAAACCCTTCTTATGAATTCTTATGTGGTTAAGTCAGTTATGATACTCTTGAACTTCATATTTATAACAGTTAAATTACTTTTTTA

mRNA sequence

CTTTAATTGATTTCACACACTTCCTTCCCACTTTTGAGCGCTGCATTTCATCGGCATTTTTTTCTCTCGCAGTATCTCTCTCTGTTCTTCATCTTCAACCTTCCTTTCCCACAAAGTTGAAGCTAAATCGAAGCAACAATGGCCGGTTACAGAGCTGATGATGATTACGACTACCTCTTCAAGGTGGTTCTGATCGGAGACTCCGGCGTCGGCAAGTCCAATCTGCTCTCCAGATTCACCAAGAACGAGTTTAATCTCGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATTCTAAGGTCATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGTGCCTACTATCGTGGAGCAGTCGGTGCACTCCTTGTATACGATGTCACTCGTCACGCAACATTTGAGAATGTGGACCGGTGGCTGAAAGAATTGAAGAACCACACCGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTCCGTCACCTCGTTGCAGTTCCAACCGAAGATGGAAAGTCCTACGCCGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTCGAAGCGGTCAATGTTGAAAAAGCCTTCGCCGAGGTCCTGACTCAGATCTATCACATATTAAGCAAGAAGGCTGTCGAAGGGGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAGAATAAACATCAAAGACGAGTCTGGCTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGGTAATCTGTAAGATGATTTTGGATTTTATGTACTGTAATATTTTTTGTTTGAAGAGAGACAGGAACTAAAAAAGGAAGATAATCCCAAGACCTTCAATCTTGTTGTATTACAAAAGAGGAGTACCTGCCACATGATTGGATTGTGGTTGCTGTTGTGTTCATCATTAGCTTCTACCAAAAAAGAAATATTGGTTTCAAGTTTAGTTTCACTTTCTATGATAAGTGTCCTTCCTTTTAGCTTTTAGCCCTTTTGATTTATATAAGCATTCATGATGTTCTTATGTTGATGATGAAACCCTTCTTATGAATTCTTATGTGGTTAAGTCAGTTATGATACTCTTGAACTTCATATTTATAACAGTTAAATTACTTTTTTA

Coding sequence (CDS)

ATGGCCGGTTACAGAGCTGATGATGATTACGACTACCTCTTCAAGGTGGTTCTGATCGGAGACTCCGGCGTCGGCAAGTCCAATCTGCTCTCCAGATTCACCAAGAACGAGTTTAATCTCGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATTCTAAGGTCATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGTGCCTACTATCGTGGAGCAGTCGGTGCACTCCTTGTATACGATGTCACTCGTCACGCAACATTTGAGAATGTGGACCGGTGGCTGAAAGAATTGAAGAACCACACCGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTCCGTCACCTCGTTGCAGTTCCAACCGAAGATGGAAAGTCCTACGCCGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTCGAAGCGGTCAATGTTGAAAAAGCCTTCGCCGAGGTCCTGACTCAGATCTATCACATATTAAGCAAGAAGGCTGTCGAAGGGGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAGAATAAACATCAAAGACGAGTCTGGCTTAAACAGAATCAAATGTTGCTCGAGCTAA

Protein sequence

MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSKKAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS

Homology

[Close]

BLAST of Sed0010199 vs. NCBI nr
Match: XP_022142868.1 (ras-related protein Rab11D-like [Momordica charantia])

HSP 1 Score: 424.9 bits (1091), Expect = 4.3e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGE+INIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. NCBI nr
Match: XP_022982677.1 (ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related protein RABA1b-like [Cucurbita pepo subsp. pepo] >XP_038877813.1 ras-related protein RABA1b-like [Benincasa hispida] >KAG6600502.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031142.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 423.3 bits (1087), Expect = 1.2e-114
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGE+INIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. NCBI nr
Match: XP_023552145.1 (ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo] >KAG6577033.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015054.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422.5 bits (1085), Expect = 2.1e-114
Identity = 213/217 (98.16%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSA+SVPAQGE+INIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. NCBI nr
Match: XP_004137233.1 (ras-related protein RABA1b [Cucumis sativus] >KGN53569.1 hypothetical protein Csa_015307 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGE+INIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. NCBI nr
Match: XP_022942927.1 (ras-related protein RABA1b-like [Cucurbita moschata])

HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGE+INI+DESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 2.9e-98
Identity = 177/218 (81.19%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD+K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFEN  RWLKEL++HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VML+GNKSDLRHLVAVPTEDGKS+AERESLYF+ETSALEA NVE AF EVLTQIY I+SK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESG-LNRIKCCSS 218
           +AVE G++GS+S +P++G+ IN+K++S  L R  CCS+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218

[Close]

BLAST of Sed0010199 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.2e-97
Identity = 185/218 (84.86%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIK-DESGLNRIKCCSS 218
           K VE GE+G+A SVP +GE+I +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Sed0010199 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-95
Identity = 175/218 (80.28%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D+K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENV RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VML+GNKSDLRHLVAV T++ K  AERE LYF+ETSALEA NVE AF E LTQIY I+SK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDE-SGLNRIKCCSS 218
           KAVE G+ G+ SS P +GE INIKDE S   +  CCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of Sed0010199 vs. ExPASy Swiss-Prot
Match: Q40195 (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.1e-94
Identity = 172/218 (78.90%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGY+ADD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++LN+D K
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE   RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VML+GNKSDLRHLV V TEDGK++AE+ESLYF+ETSALEA NVE AF+EVLTQIY I+SK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINI-KDESGLNRIKCCSS 218
           +AVE G+  S S VP+QG+ IN+ +D S LNR +CCS+
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218

[Close]

BLAST of Sed0010199 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-94
Identity = 173/217 (79.72%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH++SK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KA+E GE+  + +VP++GE+I++ D S + +  CCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV-DVSAVKKTGCCSN 214

[Close]

BLAST of Sed0010199 vs. ExPASy TrEMBL
Match: A0A6J1CPC3 (ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGE+INIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. ExPASy TrEMBL
Match: A0A6J1IX83 (ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.0e-115
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGE+INIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. ExPASy TrEMBL
Match: A0A0A0KXK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGE+INIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. ExPASy TrEMBL
Match: A0A6J1FRL8 (ras-related protein RABA1b-like OS=Cucurbita moschata OX=3662 GN=LOC111447812 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGE+INI+DESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS 217

[Close]

BLAST of Sed0010199 vs. ExPASy TrEMBL
Match: A0A1S3BSA1 (ras-related protein RABA1b-like OS=Cucumis melo OX=3656 GN=LOC103492947 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.0e-114
Identity = 212/217 (97.70%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGE+INIKDESGLNR+KCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRMKCCSS 217

[Close]

BLAST of Sed0010199 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 355.9 bits (912), Expect = 2.3e-98
Identity = 185/218 (84.86%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIK-DESGLNRIKCCSS 218
           K VE GE+G+A SVP +GE+I +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Sed0010199 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-95
Identity = 173/217 (79.72%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH++SK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIKDESGLNRIKCCSS 218
           KA+E GE+  + +VP++GE+I++ D S + +  CCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV-DVSAVKKTGCCSN 214

[Close]

BLAST of Sed0010199 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-95
Identity = 176/218 (80.73%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VMLVGNKSDLRHLVAV TED KS+AE+ESLYF+ETSALEA NVE AFAEVLTQI+HI+SK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINI-KDESGLNRIKCCSS 218
           KA+E      +++VP++G++I+I KD S + +  CCS+
Sbjct: 181 KAMEAA--SESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Sed0010199 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-91
Identity = 166/218 (76.15%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T  V+ K
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATFEN  RWL+EL+ HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           VML+GNK DLRHLVAV TE+ K++AERESLYF+ETSAL+A NVE AF EVLTQI+ I+SK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 KAVEGGENGSASSVPAQGERINIK-DESGLNRIKCCSS 218
           ++V+GG  G ++ +P +GE IN+K D S L R+ CCS+
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of Sed0010199 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 317.8 bits (813), Expect = 6.9e-87
Identity = 158/220 (71.82%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MA YRADDDYD+L+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++VD K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL++HT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHILSK 180
           +MLVGNK+DLRHL AV TED K++AERE+ +F+ETSALEA+NVE AF EVL+QIY + SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KAVEGGENGSASSVPAQGERINI---KDESGLNRIKCCSS 218
           KA++ G++   +++P +G+ IN+    D S + ++ CCSS
Sbjct: 181 KALDIGDD--HTTLP-KGQSINVGSKDDVSEVKKVGCCSS 217

The following BLAST results are available for this feature:

BLAST of Sed0010199 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142868.1	4.3e-115	99.08	ras-related protein Rab11D-like [Momordica charantia]	[more]
XP_022982677.1	1.2e-114	98.62	ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related p...	[more]
XP_023552145.1	2.1e-114	98.16	ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo] >KAG6577033.1 Ras-r...	[more]
XP_004137233.1	2.8e-114	98.16	ras-related protein RABA1b [Cucumis sativus] >KGN53569.1 hypothetical protein Cs...	[more]
XP_022942927.1	2.8e-114	98.16	ras-related protein RABA1b-like [Cucurbita moschata]	[more]

BLAST of Sed0010199 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	2.9e-98	81.19	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q39222	3.2e-97	84.86	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]
Q01111	1.3e-95	80.28	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q40195	1.1e-94	78.90	Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1	[more]
Q9SN35	1.5e-94	79.72	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]

BLAST of Sed0010199 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPC3	2.1e-115	99.08	ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 P...	[more]
A0A6J1IX83	6.0e-115	98.62	ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4...	[more]
A0A0A0KXK6	1.3e-114	98.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1	[more]
A0A6J1FRL8	1.3e-114	98.16	ras-related protein RABA1b-like OS=Cucurbita moschata OX=3662 GN=LOC111447812 PE...	[more]
A0A1S3BSA1	3.0e-114	97.70	ras-related protein RABA1b-like OS=Cucumis melo OX=3656 GN=LOC103492947 PE=4 SV=...	[more]

BLAST of Sed0010199 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16920.1	2.3e-98	84.86	RAB GTPase homolog A1B	[more]
AT4G18800.1	1.1e-95	79.72	RAB GTPase homolog A1D	[more]
AT5G45750.1	1.8e-95	80.73	RAB GTPase homolog A1C	[more]
AT1G06400.1	1.2e-91	76.15	Ras-related small GTP-binding family protein	[more]
AT3G15060.1	6.9e-87	71.82	RAB GTPase homolog A1G	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 55.22 coord: 117..130 score: 53.64 coord: 37..53 score: 36.7 coord: 152..174 score: 41.61 coord: 55..77 score: 52.53
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 2.2E-107 score: 372.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 e-value: 1.1E-5 score: 31.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 2.2E-25 score: 100.4
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..217
None	No IPR available	PANTHER	PTHR24073:SF1156	RAS-RELATED PROTEIN RABA1B	coord: 1..217
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 35.449776
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..175 score: 9.65588
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 1.26835E-126 score: 352.633
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 4.0E-12 score: 35.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 2.8E-61 score: 205.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 15.946436
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 2.1E-39 score: 132.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 9.3E-71 score: 239.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010199.1	Sed0010199.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0060627	regulation of vesicle-mediated transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding